View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18997_low_1 (Length: 837)

Name: NF18997_low_1
Description: NF18997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18997_low_1
NF18997_low_1
[»] chr3 (36 HSPs)
chr3 (124-443)||(42345769-42346088)
chr3 (538-821)||(42346187-42346470)
chr3 (5-83)||(28690421-28690499)
chr3 (5-84)||(32221006-32221085)
chr3 (1-85)||(42345567-42345651)
chr3 (5-84)||(6910507-6910586)
chr3 (8-85)||(38138001-38138078)
chr3 (5-84)||(21797729-21797808)
chr3 (5-84)||(33415972-33416051)
chr3 (5-84)||(43467752-43467831)
chr3 (5-84)||(20765369-20765448)
chr3 (5-84)||(27010484-27010563)
chr3 (5-83)||(13499346-13499424)
chr3 (11-84)||(42761493-42761566)
chr3 (5-84)||(21005466-21005545)
chr3 (5-84)||(27334741-27334820)
chr3 (5-84)||(39866151-39866230)
chr3 (5-84)||(42490206-42490285)
chr3 (8-81)||(43181369-43181442)
chr3 (5-82)||(44561957-44562034)
chr3 (9-84)||(36227722-36227797)
chr3 (5-84)||(54507814-54507893)
chr3 (85-127)||(42345676-42345718)
chr3 (19-80)||(19824485-19824546)
chr3 (6-79)||(30174896-30174969)
chr3 (5-84)||(25527574-25527653)
chr3 (9-79)||(48334537-48334607)
chr3 (13-85)||(21083168-21083240)
chr3 (9-84)||(15332816-15332891)
chr3 (9-84)||(33803699-33803774)
chr3 (9-83)||(26406018-26406092)
chr3 (6-78)||(3020218-3020290)
chr3 (5-77)||(30213977-30214048)
chr3 (9-44)||(22782441-22782476)
chr3 (9-44)||(22786805-22786840)
chr3 (5-86)||(42049928-42050010)
[»] chr8 (31 HSPs)
chr8 (5-84)||(14237453-14237532)
chr8 (5-84)||(42587258-42587337)
chr8 (5-84)||(132190-132269)
chr8 (5-84)||(623349-623428)
chr8 (5-83)||(22489285-22489363)
chr8 (5-85)||(8394519-8394599)
chr8 (5-84)||(18044598-18044678)
chr8 (5-80)||(24524258-24524333)
chr8 (5-84)||(36641868-36641947)
chr8 (5-84)||(38958771-38958850)
chr8 (5-85)||(4270117-4270197)
chr8 (5-84)||(616956-617035)
chr8 (5-84)||(5878489-5878568)
chr8 (5-84)||(38957343-38957422)
chr8 (5-84)||(40494557-40494636)
chr8 (5-83)||(41263983-41264061)
chr8 (5-84)||(11637955-11638031)
chr8 (5-84)||(2766058-2766137)
chr8 (9-84)||(24287937-24288012)
chr8 (5-83)||(35403690-35403768)
chr8 (8-57)||(32998625-32998674)
chr8 (9-82)||(4461483-4461556)
chr8 (9-84)||(3100501-3100576)
chr8 (12-84)||(33921671-33921740)
chr8 (5-63)||(36167881-36167939)
chr8 (8-53)||(2669996-2670041)
chr8 (5-85)||(13216730-13216810)
chr8 (9-80)||(33700087-33700158)
chr8 (9-84)||(34327072-34327147)
chr8 (9-84)||(18021046-18021121)
chr8 (9-55)||(18090504-18090550)
[»] chr4 (43 HSPs)
chr4 (9-84)||(17446643-17446718)
chr4 (5-84)||(19433368-19433447)
chr4 (5-84)||(35686580-35686659)
chr4 (8-84)||(26170163-26170239)
chr4 (5-84)||(2760740-2760819)
chr4 (5-84)||(12240187-12240266)
chr4 (5-84)||(25296589-25296668)
chr4 (5-84)||(47386296-47386375)
chr4 (11-84)||(45292011-45292084)
chr4 (12-85)||(55800979-55801052)
chr4 (5-84)||(4467530-4467609)
chr4 (5-84)||(17610453-17610532)
chr4 (5-84)||(38416660-38416739)
chr4 (5-84)||(54330700-54330779)
chr4 (5-84)||(25918376-25918452)
chr4 (5-84)||(9029459-9029538)
chr4 (5-84)||(12625424-12625503)
chr4 (5-84)||(29830516-29830595)
chr4 (9-84)||(38721514-38721589)
chr4 (5-84)||(43967896-43967975)
chr4 (5-84)||(44232087-44232166)
chr4 (5-84)||(55209584-55209663)
chr4 (13-84)||(50620496-50620567)
chr4 (8-85)||(5428752-5428829)
chr4 (5-82)||(32364344-32364421)
chr4 (5-84)||(26125881-26125960)
chr4 (5-84)||(55191997-55192076)
chr4 (11-84)||(35380904-35380977)
chr4 (5-84)||(23360345-23360424)
chr4 (5-84)||(36522978-36523057)
chr4 (5-79)||(32871375-32871449)
chr4 (9-79)||(37674881-37674951)
chr4 (5-55)||(51456418-51456468)
chr4 (5-64)||(34652055-34652114)
chr4 (9-75)||(29052237-29052303)
chr4 (10-84)||(30446479-30446553)
chr4 (9-84)||(19897798-19897873)
chr4 (9-63)||(2570913-2570967)
chr4 (6-52)||(9445309-9445355)
chr4 (9-83)||(27755899-27755973)
chr4 (5-87)||(40682780-40682862)
chr4 (9-66)||(19595882-19595939)
chr4 (13-82)||(34316885-34316954)
[»] scaffold0022 (1 HSPs)
scaffold0022 (5-84)||(100657-100736)
[»] chr7 (40 HSPs)
chr7 (5-84)||(16778678-16778757)
chr7 (9-84)||(11502590-11502665)
chr7 (9-84)||(39129936-39130011)
chr7 (5-83)||(20885276-20885354)
chr7 (5-85)||(42877559-42877639)
chr7 (5-84)||(7169296-7169375)
chr7 (5-84)||(25566558-25566637)
chr7 (5-84)||(40256229-40256308)
chr7 (13-83)||(6175007-6175077)
chr7 (6-84)||(32431368-32431446)
chr7 (5-85)||(46321161-46321241)
chr7 (9-84)||(3851251-3851326)
chr7 (5-84)||(36623481-36623560)
chr7 (5-84)||(40089928-40090007)
chr7 (5-84)||(47156200-47156279)
chr7 (5-84)||(48602609-48602688)
chr7 (11-84)||(46103380-46103453)
chr7 (5-85)||(23707432-23707512)
chr7 (5-84)||(28061525-28061604)
chr7 (5-84)||(38851857-38851936)
chr7 (5-84)||(41898161-41898240)
chr7 (5-84)||(7439076-7439155)
chr7 (5-84)||(30342247-30342325)
chr7 (5-84)||(42890354-42890433)
chr7 (11-84)||(36585841-36585914)
chr7 (9-78)||(44732189-44732258)
chr7 (5-84)||(21379917-21379996)
chr7 (5-84)||(35117298-35117377)
chr7 (34-87)||(41950790-41950843)
chr7 (5-81)||(2198775-2198851)
chr7 (5-85)||(41134497-41134577)
chr7 (9-83)||(5788388-5788462)
chr7 (5-44)||(41088760-41088799)
chr7 (7-57)||(26161774-26161824)
chr7 (15-84)||(36516022-36516091)
chr7 (6-63)||(44018883-44018940)
chr7 (5-83)||(7457756-7457834)
chr7 (35-85)||(7705741-7705791)
chr7 (6-44)||(33010370-33010408)
chr7 (5-43)||(36341793-36341831)
[»] chr2 (25 HSPs)
chr2 (5-84)||(33607545-33607624)
chr2 (5-84)||(36719334-36719413)
chr2 (5-84)||(44365330-44365409)
chr2 (5-83)||(9172157-9172235)
chr2 (5-84)||(2182970-2183049)
chr2 (5-84)||(5405169-5405248)
chr2 (5-84)||(7608222-7608301)
chr2 (5-84)||(11841603-11841682)
chr2 (5-84)||(19141076-19141155)
chr2 (5-83)||(36072347-36072425)
chr2 (5-66)||(39358308-39358369)
chr2 (5-84)||(8042032-8042111)
chr2 (9-84)||(13125155-13125230)
chr2 (7-84)||(32774767-32774844)
chr2 (5-84)||(36177590-36177669)
chr2 (5-83)||(7800020-7800098)
chr2 (6-84)||(33228455-33228533)
chr2 (9-57)||(19165819-19165867)
chr2 (9-63)||(44645048-44645102)
chr2 (5-84)||(6223239-6223318)
chr2 (5-48)||(13598935-13598978)
chr2 (13-84)||(24093083-24093154)
chr2 (11-85)||(11931844-11931918)
chr2 (5-79)||(13443108-13443182)
chr2 (6-57)||(32887080-32887131)
[»] scaffold0018 (1 HSPs)
scaffold0018 (8-84)||(67780-67856)
[»] chr6 (27 HSPs)
chr6 (5-85)||(21540638-21540718)
chr6 (5-84)||(18668698-18668777)
chr6 (9-84)||(20226308-20226383)
chr6 (9-84)||(22120292-22120367)
chr6 (7-84)||(32671991-32672068)
chr6 (8-84)||(20437027-20437103)
chr6 (5-84)||(22054945-22055024)
chr6 (5-85)||(17213801-17213881)
chr6 (5-84)||(4148104-4148183)
chr6 (5-84)||(24623951-24624030)
chr6 (5-82)||(24955408-24955485)
chr6 (5-84)||(1040997-1041076)
chr6 (5-84)||(12226148-12226227)
chr6 (5-84)||(19087968-19088047)
chr6 (5-84)||(32414689-32414768)
chr6 (9-85)||(2360167-2360243)
chr6 (5-57)||(28477926-28477978)
chr6 (5-57)||(29790379-29790431)
chr6 (5-84)||(6563399-6563478)
chr6 (5-84)||(17257661-17257740)
chr6 (5-85)||(29694056-29694136)
chr6 (6-85)||(3989275-3989353)
chr6 (5-71)||(10520641-10520707)
chr6 (9-80)||(31869913-31869984)
chr6 (9-45)||(32530191-32530227)
chr6 (5-38)||(25475869-25475902)
chr6 (5-50)||(31568833-31568878)
[»] chr5 (24 HSPs)
chr5 (5-84)||(18094091-18094170)
chr5 (5-84)||(27109861-27109940)
chr5 (5-80)||(11251287-11251362)
chr5 (5-85)||(40156371-40156453)
chr5 (5-84)||(978250-978329)
chr5 (5-84)||(14634167-14634246)
chr5 (5-84)||(33387392-33387471)
chr5 (11-84)||(9502637-9502710)
chr5 (7-84)||(30354880-30354957)
chr5 (5-84)||(7224338-7224417)
chr5 (5-84)||(34112130-34112209)
chr5 (9-83)||(12446878-12446952)
chr5 (5-84)||(33587479-33587558)
chr5 (5-84)||(8086041-8086119)
chr5 (5-84)||(11785736-11785815)
chr5 (5-85)||(7002517-7002597)
chr5 (5-85)||(18598705-18598785)
chr5 (5-84)||(38916263-38916342)
chr5 (5-83)||(3472288-3472366)
chr5 (15-83)||(12007518-12007586)
chr5 (5-62)||(27579462-27579519)
chr5 (9-84)||(25889441-25889515)
chr5 (9-38)||(9050632-9050661)
chr5 (8-85)||(20692392-20692469)
[»] chr1 (28 HSPs)
chr1 (5-84)||(25171326-25171405)
chr1 (7-84)||(36399273-36399350)
chr1 (5-84)||(30003706-30003786)
chr1 (8-84)||(40771782-40771858)
chr1 (5-84)||(9342655-9342734)
chr1 (5-84)||(17306127-17306206)
chr1 (5-84)||(27292813-27292892)
chr1 (5-84)||(40977498-40977577)
chr1 (7-84)||(52024201-52024278)
chr1 (5-84)||(6402420-6402499)
chr1 (5-84)||(11641077-11641156)
chr1 (5-84)||(36757496-36757575)
chr1 (5-84)||(42367306-42367385)
chr1 (7-84)||(30701893-30701970)
chr1 (5-84)||(16120449-16120528)
chr1 (5-79)||(42788558-42788631)
chr1 (5-66)||(4302288-4302349)
chr1 (5-84)||(6766542-6766621)
chr1 (5-84)||(15912348-15912426)
chr1 (9-83)||(42735176-42735250)
chr1 (5-84)||(38153287-38153366)
chr1 (5-84)||(7568507-7568586)
chr1 (13-84)||(22575597-22575668)
chr1 (13-84)||(44647723-44647794)
chr1 (5-83)||(50972643-50972721)
chr1 (5-40)||(26910249-26910284)
chr1 (9-84)||(48375180-48375254)
chr1 (6-72)||(16689996-16690062)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-84)||(161847-161926)
[»] scaffold0056 (1 HSPs)
scaffold0056 (15-84)||(71143-71212)
[»] scaffold0295 (1 HSPs)
scaffold0295 (9-84)||(13727-13802)


Alignment Details
Target: chr3 (Bit Score: 291; Significance: 1e-163; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 124 - 443
Target Start/End: Original strand, 42345769 - 42346088
Alignment:
Q  124 taacaaaggcaaagtggaagctccaagcacaaatataggtgccttacattacataatgtcctaacaacacatcataagtcataagtggttctaaagtgac 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42345769 taacaaaggcaaagtggaagctccaagcacaaatataggtgccttacattacataatgtcctaacaacacatcataagtcataagtgggtctaaagtgac 42345868  T
Q  224 acaataatttcataaaagcttgaaaatcacattgacttagtacattaattttgagaatccaatgtaatcgaaatatgcattgaatctgccacattgatac 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42345869 acaataatttcataaaagcttgaaaatcacattgacttagtacattaattttgagaatccaatgtaatcgaaatatgcattgaatctgccacattgatac 42345968  T
Q  324 aaaagtggggcatatgcaatcaacactccttattgataaaaatgaacaatgtttgaatttcactcttgtgaactacgtggcatcaccgacccgctcnnnn 423  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||        
T  42345969 aaaagtggggcatatgcaatcaacactccttattgataaaaatgaacaatgtttgaatttcactcttgtgaattacgtggcatcaccgacccgctctttt 42346068  T
Q  424 nnnctactctaccataccac 443  Q
       |||||||||||||||||    
T  42346069 tttctactctaccataccac 42346088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 538 - 821
Target Start/End: Original strand, 42346187 - 42346470
Alignment:
Q  538 ccgtccaccgtccatcatgatctgctcgccccggtccaataaacccggttcaaactggctcgaccgtctccggtccaataaaggtatcccaacggatgat 637  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42346187 ccgtccaccgtccatcatgatctgctcgccccggtccaataaacccggttcaaactggctcgaccgtctccggtccaataaaggtatcccaacggatgat 42346286  T
Q  638 aacctcgacctcgacactttcattcttaatctcgccacccattctcctcaaccccgccccattaaaccgctccgccaccctccaccaataacccacgacg 737  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42346287 aacctcgacctcgacactttcattcttaatctcgccacccattctcctcaaccccgccccattaaaccgctccgccaccgtccaccaataacccacgacg 42346386  T
Q  738 atccaccgttaaccaccgtcctcgctcatctcttcaatcccggcgccgccaccatcacctcaaagaaatgtcctaggaaacaaa 821  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42346387 atccaccgttaaccaccgtcctcgctcatctcttcaatcccggcgccgccaccatcacctcaaagaaatgtcccaggaaacaaa 42346470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 28690421 - 28690499
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  28690421 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtggttgacttggacatgtattttgaaa 28690499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 32221006 - 32221085
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  32221006 ttagataattaaagatattaacggtcaaaattgtgcattgacatatatgaagtggttgactttgacatgtattttaaaac 32221085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 42345567 - 42345651
Alignment:
Q  1 aatgttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||| ||||||||||||||||||    
T  42345567 aatgttagataattaaagatattaacggtcaaaattgtacatcgacatatgtgaaatggttgacttggacatgtattttgaaaca 42345651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 6910507 - 6910586
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  6910507 ttagataattaaagagattaacggtcaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 6910586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 38138001 - 38138078
Alignment:
Q  8 gataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||||||    
T  38138001 gataattaaagatattaacggtcaaaattgtgcattggcatgtgtgaagtggttgacttggacatgtattttgaaaca 38138078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 21797729 - 21797808
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||    
T  21797729 ttagataattaaagatattaatggtcaaaattatgcattaacatatgtgaagtggttgacttagacatgtattttgaaac 21797808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 33415972 - 33416051
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  33415972 ttagataattaaatatattaacagtcaaaattgtgcattgacatatgtgaagtggttgacttggacatctattttgaaac 33416051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 43467831 - 43467752
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | || | |||||||| |||||||||||||||||    
T  43467831 ttagataattaaagatattaacggtcaaaattgtgcattgacatatataaaatggttgacttagacatgtattttgaaac 43467752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 20765369 - 20765448
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  20765369 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 20765448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 27010563 - 27010484
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  27010563 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 27010484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 13499424 - 13499346
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| ||||||||||||||||    
T  13499424 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaa 13499346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 42761566 - 42761493
Alignment:
Q  11 aattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  42761566 aattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 42761493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 21005466 - 21005545
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||| | |||||||| |||||||||||||||||    
T  21005466 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaaatggttgacttggacatgtattttgaaac 21005545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 27334820 - 27334741
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||  ||||||||||||||||    
T  27334820 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttgaacatgtattttgaaac 27334741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 39866230 - 39866151
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||  ||||||||||||||||    
T  39866230 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttgaacatgtattttgaaac 39866151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 42490285 - 42490206
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||| | ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  42490285 ttagaaaattaaagatattatctgtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 42490206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 43181442 - 43181369
Alignment:
Q  8 gataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttga 81  Q
    ||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||| || ||||||||||||||    
T  43181442 gataattaaagatattaacggtcaaaattatgcattgacatgtgagaagtggttgatttggacatgtattttga 43181369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 44561957 - 44562034
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaa 82  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||| |||||||| |||||||  |||||||||||||||    
T  44561957 ttagataattaaagatattaacggtcaaagttgtgaattggcatgtgtgaagtggttgactgcgacatgtattttgaa 44562034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 36227722 - 36227797
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||||||||  ||||||| ||||| |||||||||||    
T  36227722 ataattaaagattttaacggtcaaaattgtgcattggcatgtgtgaagtgattgacttggacatatattttgaaac 36227797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 54507814 - 54507893
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||| |||||| | |||| ||||||||||||| |||||||| |||||| ||||| ||||    
T  54507814 ttagataattaaagatattaacggtaaaaattatacattaacatatgtgaagtggttgacttggacatgcattttaaaac 54507893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 42345676 - 42345718
Alignment:
Q  85 atacatttattcaaagcaaaataattagagtttgatttataac 127  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42345676 atacatttattcaaagcaaaataattagagtttgatttataac 42345718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 19824485 - 19824546
Alignment:
Q  19 atattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttg 80  Q
    ||||||||||| |||||||||| ||||||||| |||||| |||||||| |||||||||||||    
T  19824485 atattaacggttaaaattgtgcgttgacatatttgaagtggttgacttggacatgtattttg 19824546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 30174896 - 30174969
Alignment:
Q  6 tagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtatttt 79  Q
    |||||||||||| ||||||| ||||||| |||||  ||||| | |||||||||||||| |||||||||||||||    
T  30174896 tagataattaaatatattaatggtcaaagttgtgtcttgacctgtgtgaagtagttgattttgacatgtatttt 30174969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 25527574 - 25527653
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| ||||||||| ||||| ||||||||| |||| |||||||| ||| |||  ||||||||||| |||||    
T  25527574 ttagataattaaaaatattaacgatcaaagttgtgcattaacatgtgtgaagtggttaactgcgacatgtatttggaaac 25527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 48334607 - 48334537
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtatttt 79  Q
    ||||||||||||||||| ||||||||||||| |||||||| |||| | || || ||| |||||||||||||    
T  48334607 ataattaaagatattaatggtcaaaattgtgtattgacatgtgtgtattattttactgtgacatgtatttt 48334537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 21083168 - 21083240
Alignment:
Q  13 ttaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    ||||||||||||| ||||||| ||||| ||||  || ||||| || ||||||| |||||||||||||||||||    
T  21083168 ttaaagatattaatggtcaaagttgtgtattggtatgtgtgacgtggttgactatgacatgtattttgaaaca 21083240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 15332891 - 15332816
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||| ||||||| ||||||| ||||| |||| ||| |||| ||| |||||||  |||||||||||||||||    
T  15332891 ataattaaaaatattaatggtcaaagttgtgtattggcatgtgtgtagtggttgactgggacatgtattttgaaac 15332816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 33803699 - 33803774
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||| |||||||||||||||| |||||||||| |||| | |||| ||||| || | ||||| |||||||||    
T  33803699 ataattaaaaatattaacggtcaaaagtgtgcattgatatatataaagtggttgatttggtcatgttttttgaaac 33803774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 26406092 - 26406018
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    ||||||||| ||||||| ||||||| ||||| |||  |||||||| ||| |||||||  ||||||||||||||||    
T  26406092 ataattaaatatattaatggtcaaagttgtgtattagcatatgtgcagtggttgactgcgacatgtattttgaaa 26406018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 3020290 - 3020218
Alignment:
Q  6 tagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattt 78  Q
    |||||||| || ||||||||  |||||| ||||| |||||||||| |||||| |||||||  |||||||||||    
T  3020290 tagataatcaatgatattaatagtcaaagttgtgtattgacatatatgaagtggttgactacgacatgtattt 3020218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 30213977 - 30214048
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtatt 77  Q
    ||||| ||||||| |||||||| ||||||||| ||||| | |||||||||||| |||||||| ||||| ||||    
T  30213977 ttagaaaattaaa-atattaacagtcaaaattatgcatcggcatatgtgaagtggttgacttggacatctatt 30214048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 22782441 - 22782476
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattg 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22782441 ataattaaagatattaatggtcaaaattgtgcattg 22782476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 22786805 - 22786840
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattg 44  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22786805 ataattaaagatattaatggtcaaaattgtgcattg 22786840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 42049928 - 42050010
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtag-ttgactttgacatgtattttgaaacat 86  Q
    ||||||||||||| ||||||||| ||||| |||||| ||||||| ||| | |||| ||||||   |||||||||||| |||||    
T  42049928 ttagataattaaaaatattaacgatcaaagttgtgcgttgacatgtgtaatgtagtttgactgcaacatgtattttgcaacat 42050010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 3e-32; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 14237453 - 14237532
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  14237453 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtggttgacttggacatgtattttgaaac 14237532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 42587337 - 42587258
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  42587337 ttagataattaaagatattaacggtaaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 42587258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 132190 - 132269
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||||| ||||    
T  132190 ttagataattaaagatattaacggtcaaaattgtacattggcatgtgtgaagtagttgacttggacatgtattttaaaac 132269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 623349 - 623428
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  623349 ttagaaaattaaagatattaacagtcaaaattatgcattgacatatgtgaagtggttgacttggacatgtattttgaaac 623428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 22489363 - 22489285
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||  |||||||||||||||    
T  22489363 ttagataattaaagatattaacgatcaaaattgtgcattgacatatgttaagtggttgacttaaacatgtattttgaaa 22489285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 8394519 - 8394599
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||||||||||||||||||| || |||||||| ||||||||||| |||||| |||||||| ||||||||||||||||||    
T  8394519 ttagataattaaagatattaacagttaaaattgtacattgacatatatgaagtggttgacttggacatgtattttgaaaca 8394599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 18044598 - 18044678
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgacttt-gacatgtattttgaaac 84  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||    
T  18044598 ttagataattaaatatattaacggtcaaaattgtgcattggcatatgtgaagtggttgactttatacatgtattttgaaac 18044678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 24524258 - 24524333
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttg 80  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  24524258 ttagataatttaagatattaaccgtcaaaattgtgcattgacatatgtgaaatggttgacttggacatgtattttg 24524333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 36641947 - 36641868
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  36641947 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttagacatgtattttgaaac 36641868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 38958850 - 38958771
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||  |||||| |||||||||    
T  38958850 ttagataattaaagatattaatagtcaaaattgtgcattgacatatgtgaagtggttgacttgaacatgtgttttgaaac 38958771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 4270197 - 4270117
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| | || |||||||||||| |||||    
T  4270197 ttagataattaaagatattaacggtcaaaattatgcattaacatatgtgaagtggttaatttggacatgtattttaaaaca 4270117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 616956 - 617035
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||| | |||| |||||||| |||||||||||||||||    
T  616956 ttagataattaaagatattaactgtcaaaattttgcattgtcatattttaagttgttgacttggacatgtattttgaaac 617035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 5878489 - 5878568
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| | |||||| |||||||| |||||| ||||||||||    
T  5878489 ttagataattaaatatattaacagtcaaaattgtgcattgacatgtttgaagtggttgacttggacatgcattttgaaac 5878568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 38957343 - 38957422
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| ||||||||  ||||||| ||||| |||||||||||    
T  38957343 ttagataattaaagatattaagggtcaaaattgtgcattggcatgtgtgaagtgcttgacttggacatatattttgaaac 38957422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 40494557 - 40494636
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||  ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  40494557 ttagaaaattaaagatattaatagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 40494636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 41263983 - 41264061
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    |||||||||||||||||||||||||||||||| || ||||  |||||||||||  ||||||| ||||||||||||||||    
T  41263983 ttagataattaaagatattaacggtcaaaattatgtattggtatatgtgaagtgattgacttggacatgtattttgaaa 41264061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 11637955 - 11638031
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| |||||| |||||||||   ||||||||||||||    
T  11637955 ttagataattaatgatattaacggtcaaaattgttcattgacatatatgaagtggttgacttt---atgtattttgaaac 11638031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 2766137 - 2766058
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| |||||| | | ||| || |||||||||||||||||    
T  2766137 ttagataattaaatatattaacggttaaaattgtgcattgacatgtgtgaaatggctgatttggacatgtattttgaaac 2766058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 24287937 - 24288012
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||| |  |||||||||||||||||    
T  24287937 ataattaaagatattaacggtcaaagttgtgcattggcatgtgtgaagtcgttgattgcgacatgtattttgaaac 24288012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 35403690 - 35403768
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||| |  || |||| ||||||||||||||||    
T  35403690 ttagataattaaagatattaatggtcaaaattgtacgttgacatatgtgaaatgattaacttggacatgtattttgaaa 35403768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 32998625 - 32998674
Alignment:
Q  8 gataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagt 57  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32998625 gataattaaagatattaacggtcaaaattgtgcattggcatatgtgaagt 32998674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 4461556 - 4461483
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaa 82  Q
    |||||||||||||||||  ||||||||||||||| | ||| |||||||||||||||   |||||||||||||||    
T  4461556 ataattaaagatattaatagtcaaaattgtgcatcgtcatgtgtgaagtagttgacaacgacatgtattttgaa 4461483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 3100576 - 3100501
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||  ||| |||| ||||||||||||||||||||||| ||||||  |||| || |||||||||||||||||    
T  3100576 ataattaattataataacagtcaaaattgtgcattgacatatctgaagtgattgatttggacatgtattttgaaac 3100501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 33921671 - 33921740
Alignment:
Q  12 attaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||| |||||||||||| |||||||||||||||   ||| |||||  ||||||||||||||||    
T  33921671 attaaagatattaatggtcaaaattgtacattgacatatgtga---agtggacttgaacatgtattttgaaac 33921740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 36167881 - 36167939
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttga 63  Q
    ||||||||||||||||||||| ||||||||||||||| |||| | |||||||| |||||    
T  36167881 ttagataattaaagatattaaaggtcaaaattgtgcactgacgtgtgtgaagtggttga 36167939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 2670041 - 2669996
Alignment:
Q  8 gataattaaagatattaacggtcaaaattgtgcattgacatatgtg 53  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||    
T  2670041 gataattaaagatattaaaagtcaaaattgtgcattgacatatgtg 2669996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 13216810 - 13216730
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    ||||||| | |||||||||||  ||||||||||||||| ||| |||||||||| |||||||  |||||||| ||| |||||    
T  13216810 ttagatattaaaagatattaatagtcaaaattgtgcatcgacctatgtgaagtggttgactaagacatgtaatttaaaaca 13216730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 33700158 - 33700087
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttg 80  Q
    ||||||||||||||||| ||||||| ||||| |||| ||| |||| ||| |||||||  |||||||||||||    
T  33700158 ataattaaagatattaatggtcaaagttgtgtattggcatgtgtgcagtggttgactgcgacatgtattttg 33700087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 34327147 - 34327072
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||| |||||||   ||||||||||||||| |||| ||| |||||||||||  |||||||||||| |||||    
T  34327147 ataattaaatatattaatactcaaaattgtgcattaacatgtgtaaagtagttgacaatgacatgtatttagaaac 34327072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 18021046 - 18021121
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||| ||||||| ||||| |||| ||| |||| ||| |||||||   |||||||||| |||||    
T  18021046 ataattaaagatattaatggtcaaagttgtgtattgccatgtgtgcagtggttgactgcaacatgtatttagaaac 18021121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 18090504 - 18090550
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaa 55  Q
    |||||||||||||| |||| ||||| |||||||||||||| ||||||    
T  18090504 ataattaaagatatcaacgatcaaagttgtgcattgacatgtgtgaa 18090550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 3e-32; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 17446718 - 17446643
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17446718 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgacttggacatgtattttgaaac 17446643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 19433447 - 19433368
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  19433447 ttagataattaaagatattaacggtcaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 19433368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 35686580 - 35686659
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| ||||||||||    
T  35686580 ttagataattaaagatattaacggtcaaaattgtgcattggcatatgtgaagtggttgacttggacatgcattttgaaac 35686659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 26170163 - 26170239
Alignment:
Q  8 gataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| |||||||||||||||||    
T  26170163 gataattaaagatattaacggtcaaaattgagcattgtcatatgtgaagtggttgacttggacatgtattttgaaac 26170239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 2760819 - 2760740
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  2760819 ttagaaaattaaagatattaacagtcaaaattatgcattgacatatgtgaagtggttgacttggacatgtattttgaaac 2760740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 12240266 - 12240187
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| |||||||||||    
T  12240266 ttagataattaaagatattaatggtcaaaattgtgtattggcatatgtgaagtggttgactttgacatatattttgaaac 12240187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 25296668 - 25296589
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||    
T  25296668 ttagataattaaagttattaacggtcaaaattgtgcattgacatgtgtgaagtggttgacttatacatgtattttgaaac 25296589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 47386375 - 47386296
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||||| |||||||||||||||||    
T  47386375 ttagataattaaagatattaacggtcaaaattatacattggcatgtgtgaagtagttgacttggacatgtattttgaaac 47386296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 45292011 - 45292084
Alignment:
Q  11 aattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||    
T  45292011 aattaaagatattaacagtcaaaattatgcattggcatatgtgaagtagttgacttggacatgtattttgaaac 45292084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 55800979 - 55801052
Alignment:
Q  12 attaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||| |||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||    
T  55800979 attaaatatattaacggtcaaaattgtgcattgacatatataaagtggttgactttgacatgtattttgaaaca 55801052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 4467609 - 4467530
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| | |||||| |||||||| |||||||||||||||||    
T  4467609 ttagataattaaagatattaacggtcaaaatcgtgcattggcatgtttgaagtggttgacttggacatgtattttgaaac 4467530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 17610453 - 17610532
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||  |||| |||||||||||    
T  17610453 ttagataattaaagatatcaacggtcaaaattgtgcattggcatatgtgaagtggttgacttgaacatatattttgaaac 17610532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 38416739 - 38416660
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  38416739 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 38416660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 54330779 - 54330700
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||  ||||||| ||||| |||||||||||    
T  54330779 ttagataattaaatatattaacggttaaaattgtgcattgacatatgtgaagtgattgacttggacatctattttgaaac 54330700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 25918376 - 25918452
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||||||  ||||||||||||||||    
T  25918376 ttagataattaaagatattaacggtcaaaattgtacattgacatatgtga---agttgacttaaacatgtattttgaaac 25918452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 9029538 - 9029459
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||  |||||||  ||||||||||| ||||    
T  9029538 ttagataattaaagatattaacgatcaaaattgtgcattggcatatgtgaagtgattgacttaaacatgtattttaaaac 9029459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 12625424 - 12625503
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||| ||| ||||||||  ||||||||||||||||    
T  12625424 ttagataattaaatatattaacggtcaaaattgtgcattagcatatgtggagtggttgacttgaacatgtattttgaaac 12625503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 29830516 - 29830595
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| ||||||||||||||||  |||||||| |||||||||||||||||||| ||| |||| |||||||||||||||||    
T  29830516 ttagaaaattaaagatattaacaatcaaaattatgcattgacatatgtgaagtggttcacttagacatgtattttgaaac 29830595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 38721514 - 38721589
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||  |||||| |||||||||    
T  38721514 ataattaaagatattaacgatcaaaattgtgcattggcatatgtgaagtggttgacttgaacatgtcttttgaaac 38721589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 43967896 - 43967975
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||  ||||||||||||||||    
T  43967896 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttgaacatgtattttgaaac 43967975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 44232166 - 44232087
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| ||||||| |||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  44232166 ttagaaaattaaaaatattaacagtcaaaattatgcattgtcatatgtgaagtggttgacttggacatgtattttgaaac 44232087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 55209663 - 55209584
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| ||||||| |||| |||||||| |||||||||||||||||    
T  55209663 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtaaagtggttgacttggacatgtattttgaaac 55209584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 50620567 - 50620496
Alignment:
Q  13 ttaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||| |||||| ||||    
T  50620567 ttaaaaatattaacggttaaaattgtgcattgacatatgtgaagtggttgacttagacatctattttaaaac 50620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 5428752 - 5428829
Alignment:
Q  8 gataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    ||||||||||||| ||||  ||||||||||| ||||||||| |||||||| ||||||| | |||||||||||||||||    
T  5428752 gataattaaagatgttaatagtcaaaattgtacattgacatgtgtgaagtggttgactgttacatgtattttgaaaca 5428829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 32364421 - 32364344
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaa 82  Q
    ||||||||||||||||||| ||| | ||| |||||||||||||| |||||||||||| |||  |||||||||||||||    
T  32364421 ttagataattaaagatattgacgattaaagttgtgcattgacatgtgtgaagtagttaactgcgacatgtattttgaa 32364344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 26125881 - 26125960
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| || |||||||||||||  |||||||||||||||| ||||||||||||  |||||||  ||||||||||||||||    
T  26125881 ttagacaactaaagatattaacaatcaaaattgtgcattgccatatgtgaagtgattgacttgaacatgtattttgaaac 26125960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 55191997 - 55192076
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| ||||||||||||||||||||| |||| ||||||||||||  | || || ||||| |||||||||||    
T  55191997 ttagataattaaatatattaacggtcaaaattgtggattggcatatgtgaagtgatcgatttggacatatattttgaaac 55192076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 35380977 - 35380904
Alignment:
Q  11 aattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||| |||||||| ||||||||| |  |||| |||||||||||| |||||||| |||||||||||||||||    
T  35380977 aattaaatatattaacagtcaaaattatatattggcatatgtgaagtggttgacttggacatgtattttgaaac 35380904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 23360345 - 23360424
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||  ||||| ||||||||| |||||||| || ||||||| | | |||| |||||||||||    
T  23360345 ttagataattaaagatattaactttcaaagttgtgcattaacatatgtaaaatagttgaatgtaacatatattttgaaac 23360424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 36523057 - 36522978
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||| |||||||||| ||||||| || ||||||||||| |||||| | |||||||  |||||||| ||||||||    
T  36523057 ttagataattcaagatattaatggtcaaagttatgcattgacatgtgtgaaatggttgactgcgacatgtactttgaaac 36522978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 32871449 - 32871375
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtatttt 79  Q
    ||||||||||||| ||||||||| ||||| |||| ||||| ||||||| ||||  ||||||||||||| ||||||    
T  32871449 ttagataattaaatatattaacgatcaaagttgtacattgtcatatgtaaagtgattgactttgacatttatttt 32871375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 37674951 - 37674881
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtatttt 79  Q
    ||||||||||||||||||||||||| || ||| |||| ||||||||| ||||||| |  ||||||||||||    
T  37674951 ataattaaagatattaacggtcaaagttatgctttgatatatgtgaaatagttgattacgacatgtatttt 37674881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 51456468 - 51456418
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaa 55  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  51456468 ttagataattaaagatattaacagtcaaaattatacattgacatatgtgaa 51456418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 34652114 - 34652055
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgac 64  Q
    ||||||||||||| ||||||||| ||||| || ||||||||||| |||||||| ||||||    
T  34652114 ttagataattaaatatattaacgatcaaatttatgcattgacatgtgtgaagtggttgac 34652055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 29052237 - 29052303
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgta 75  Q
    ||||||||||||||||| || |||| ||||| |||||||| |||| |||||||||||  ||||||||    
T  29052237 ataattaaagatattaatggccaaagttgtgtattgacatgtgtgtagtagttgactgcgacatgta 29052303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 30446479 - 30446553
Alignment:
Q  10 taattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||| ||||| || ||||||| |||||||||| | ||||||    ||||||||||||||||    
T  30446479 taattaaagatattaacgatcaaagttatgcattggcatatgtgaaatggttgacagcaacatgtattttgaaac 30446553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 19897798 - 19897873
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||  |||||||||||| |||||||| |||  |   |||||||  |||||||||||||||||    
T  19897798 ataattaaagatattaaatgtcaaaattgtgtattgacatgtgtacaacggttgactgcgacatgtattttgaaac 19897873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 2570967 - 2570913
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttga 63  Q
    ||||||||||||||||||||||||| || |||||| |||  |||||||| |||||    
T  2570967 ataattaaagatattaacggtcaaagttatgcattaacaagtgtgaagtggttga 2570913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 9445355 - 9445309
Alignment:
Q  6 tagataattaaagatattaacggtcaaaattgtgcattgacatatgt 52  Q
    |||||| |||||||||||||  |||||||||||||||| ||||||||    
T  9445355 tagatatttaaagatattaaatgtcaaaattgtgcattcacatatgt 9445309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 27755899 - 27755973
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    |||||||||||||||||| |||||| |||||||||| ||| ||| | |||| ||| |   |||||||||||||||    
T  27755899 ataattaaagatattaactgtcaaagttgtgcattggcatgtgtaacgtagctgaatgcaacatgtattttgaaa 27755973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 40682780 - 40682862
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaacata 87  Q
    |||| |||| || |||||||| |||||||||||| || ||| || | |||||| |||||||  ||||||||||| ||||||||    
T  40682780 ttaggtaataaatgatattaatggtcaaaattgtacagtgatatgtatgaagtggttgactgcgacatgtatttcgaaacata 40682862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 19595882 - 19595939
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactt 66  Q
    ||||||||||||||||||| |||||| | ||||||| ||| || ||||| ||||||||    
T  19595882 ataattaaagatattaacgatcaaaaatatgcattggcatgtgcgaagttgttgactt 19595939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 34316885 - 34316954
Alignment:
Q  13 ttaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaa 82  Q
    ||||||||||||| | ||||| || || |||| ||| |||||||| |||||||  |||||||||||||||    
T  34316885 ttaaagatattaatgatcaaagttatgtattggcatgtgtgaagtggttgactgcgacatgtattttgaa 34316954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 100736 - 100657
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  100736 ttagataattaaagatattaacggtcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaac 100657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 6e-30; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 16778678 - 16778757
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  16778678 ttagataattaaagatattaacggtcaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 16778757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 11502665 - 11502590
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  11502665 ataattaaatatattaacggtcaaaattgtgcattggcatatgtgaagtggttgactttgacatgtattttgaaac 11502590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 39130011 - 39129936
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  39130011 ataattaaaaatattaacggtcaaaatcgtgcattggcatatgtgaagtagttgactttgacatgtattttgaaac 39129936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 20885276 - 20885354
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||||    
T  20885276 ttagataattaaagatattaacggtcaaaattgtgcattggcatgtgtgaagtggttgacttggacatgtattttgaaa 20885354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 42877559 - 42877639
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||    
T  42877559 ttagataattaaagatatcaacggtcaaaactgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaaca 42877639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 7169296 - 7169375
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||| |||||||||||    
T  7169296 ttagataattaaagatattaacgatcaaaattgtgcattgacatatatgaaatagttgactgtgacatatattttgaaac 7169375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 25566637 - 25566558
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||| | |||||||| |||||||||||||||||    
T  25566637 ttagataattaaagatattaacggtcaaaattgtacattggcatatgtgaaatggttgacttggacatgtattttgaaac 25566558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 40256229 - 40256308
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||  ||||||||||||||||    
T  40256229 ttagataattaaagatattaacggtcaaaattgtgcatttgcatgtgtgaagtagttgacttgaacatgtattttgaaac 40256308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 6175007 - 6175077
Alignment:
Q  13 ttaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  6175007 ttaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgacttgaatatgtattttgaaa 6175077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 32431446 - 32431368
Alignment:
Q  6 tagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||| |||||||| |||||||||||||||||    
T  32431446 tagataattaaagacattaacggtcaaaattgtgcattggcatatgtaaagtggttgacttggacatgtattttgaaac 32431368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 46321241 - 46321161
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||||| || ||||||||||||||||||    
T  46321241 ttagataattaaagatattaacggtcaaaattgtgcattagcatatgtaaagtggttgatttggacatgtattttgaaaca 46321161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 3851251 - 3851326
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||  ||||||||||    
T  3851251 ataattaaagatattaacggtcaaaattgtgcattggcatatgtgaagtggttgacttagacatacattttgaaac 3851326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 36623481 - 36623560
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  36623481 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 36623560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 40090007 - 40089928
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||| |||||||||| |||||||||||||||||    
T  40090007 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaaatagttgacttggacatgtattttgaaac 40089928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 47156200 - 47156279
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  47156200 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 47156279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 48602609 - 48602688
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  48602609 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 48602688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 46103453 - 46103380
Alignment:
Q  11 aattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  46103453 aattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 46103380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 23707512 - 23707432
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||  ||| ||||||| |||||    
T  23707512 ttagataattaaagatattaacagtcaaaattatgcattgacatatgtgaagtggttgacttgaacaagtattttaaaaca 23707432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 28061604 - 28061525
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| ||||||| |||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  28061604 ttagaaaattaaatatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 28061525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 38851936 - 38851857
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| ||||||| |||| |||||||| |||||||||||||||||    
T  38851936 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtaaagtggttgacttggacatgtattttgaaac 38851857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 41898161 - 41898240
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||  ||||||| |||||||||||||||||    
T  41898161 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtgattgacttggacatgtattttgaaac 41898240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 7439076 - 7439155
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||| |||||||||||||||||  |||||||||||  ||||| | |||||||||||| ||||    
T  7439076 ttagataattaaagatattaactgtcaaaattgtgcattggtatatgtgaagtgattgacctggacatgtattttaaaac 7439155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 30342247 - 30342325
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||| |||||||||||| |||||||| ||||||||| |||||||| ||||| || |||||||||||||||||    
T  30342247 ttagataattaa-gatattaacggttaaaattgtacattgacatgtgtgaagtggttgatttggacatgtattttgaaac 30342325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 42890433 - 42890354
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| ||||||| |||| |||||||| ||||| |||||||||||    
T  42890433 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtaaagtggttgacttggacatatattttgaaac 42890354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 36585841 - 36585914
Alignment:
Q  11 aattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||| ||  ||| ||||||||||||  ||||||| |||||||||||||||||    
T  36585841 aattaaagatattaacggtcaaaattatgtgttggcatatgtgaagtgcttgacttggacatgtattttgaaac 36585914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 44732189 - 44732258
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattt 78  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||||  ||||||| |||||||||||    
T  44732189 ataattaaagatattaacggtcaaaattgtacattgatatgtgtgaagtgattgacttggacatgtattt 44732258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 21379917 - 21379996
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||||||| ||||| || ||| |||||||| ||||    
T  21379917 ttagataattaaagatattaacagttaaaattatacattgacatatgtgaagtggttgatttagacgtgtattttcaaac 21379996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 35117298 - 35117377
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| |||||||| ||||||||| | ||||||||||||| ||||  ||||||||||||| |||||| ||||    
T  35117298 ttagataattaaaaatattaacagtcaaaattatacattgacatatgtaaagtgattgactttgacatatattttaaaac 35117377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 41950790 - 41950843
Alignment:
Q  34 attgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaacata 87  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  41950790 attgtgcattgacatatgtgaagtagttgacttggatatgtattttcaaacata 41950843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 2198775 - 2198851
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttga 81  Q
    |||||||||||||||||||||| || |||||||||||||||||| | ||||||| |||| ||  | |||||||||||    
T  2198775 ttagataattaaagatattaacagttaaaattgtgcattgacatttctgaagtaattgagttgaatatgtattttga 2198851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 41134577 - 41134497
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||||||||||||||||||| ||||||||||| ||||  ||| |||||||| ||| ||||  ||||||||||| |||||    
T  41134577 ttagataattaaagatattaacagtcaaaattgtacattatcatgtgtgaagtggttaacttgaacatgtattttaaaaca 41134497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 5788462 - 5788388
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||| || | ||||| || ||||||||||||||||    
T  5788462 ataattaaagatattaacagtcaaaattgtacattagcatatgtaaaatggttgatttggacatgtattttgaaa 5788388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 41088760 - 41088799
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattg 44  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  41088760 ttagataattaaatatattaacggtcaaaattgtgcattg 41088799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 26161774 - 26161824
Alignment:
Q  7 agataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagt 57  Q
    |||||||| || ||||||||||||||| |||||||||||||| ||||||||    
T  26161774 agataattgaaaatattaacggtcaaagttgtgcattgacatgtgtgaagt 26161824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 36516022 - 36516091
Alignment:
Q  15 aaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||| ||||||| ||||| |||| ||| || ||||| ||||||| |||||||||||| |||||    
T  36516022 aaagatattaatggtcaaagttgtgtattggcatgtgcgaagtggttgactctgacatgtatttagaaac 36516091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 44018940 - 44018883
Alignment:
Q  6 tagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttga 63  Q
    |||||||||| | ||||||| ||||||||||||| || ||||| ||||||||||||||    
T  44018940 tagataattagatatattaatggtcaaaattgtgtatagacatgtgtgaagtagttga 44018883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 7457834 - 7457756
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    ||||||||||  | ||||||||  ||||||||||| ||| ||||||||||||| ||||| ||  | |||||||||||||    
T  7457834 ttagataattttaaatattaacaatcaaaattgtgtattaacatatgtgaagtggttgaattgaatatgtattttgaaa 7457756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 7705791 - 7705741
Alignment:
Q  35 ttgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||| |||||||||||||||| | ||||||| ||||||| |||||||||||    
T  7705791 ttgttcattgacatatgtgaactggttgactgtgacatgcattttgaaaca 7705741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 33010370 - 33010408
Alignment:
Q  6 tagataattaaagatattaacggtcaaaattgtgcattg 44  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  33010370 tagataattaaagatattaaaggtcaaatttgtgcattg 33010408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 36341793 - 36341831
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcatt 43  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  36341793 ttagataattaaagatattaacagtcaaaattatgcatt 36341831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 6e-30; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 33607545 - 33607624
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  33607545 ttagataattaaagatattaacgatcaaaattgtgcattgacatatgtgaagtagttaacttggacatgtattttgaaac 33607624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 36719413 - 36719334
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |  ||||||||||| ||||    
T  36719413 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtggttgacctgaacatgtattttaaaac 36719334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 44365330 - 44365409
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||  ||||||| |||||||||||||||||    
T  44365330 ttagataattaaagatattaacggtcaaaattatgcattggcatatgtgaagtgattgacttggacatgtattttgaaac 44365409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 9172235 - 9172157
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||||||| ||||||||||||||||    
T  9172235 ttagataattaaagatattaacggtcaaaattgtacattggcatgtgtgaagtggttgacttggacatgtattttgaaa 9172157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 2183049 - 2182970
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| ||  ||||||||||||||||    
T  2183049 ttagataattaaagatattaacagtcaaaattgtgcattggcatatgtgaagttgttgatttgaacatgtattttgaaac 2182970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 5405169 - 5405248
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  5405169 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 5405248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 7608222 - 7608301
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  7608222 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 7608301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 11841682 - 11841603
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||| ||||||  ||||||||||||  ||||||| |||||||||||||||||    
T  11841682 ttagataattaaagatattaacggtcaaaattatgcattagcatatgtgaagtgattgacttggacatgtattttgaaac 11841603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 19141155 - 19141076
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  19141155 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 19141076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 36072347 - 36072425
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||    
T  36072347 ttagataactaaagatattaacagtcaaaattgtgcattgtcatatgtgaagtgattgacttggacatgtattttgaaa 36072425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 39358308 - 39358369
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactt 66  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  39358308 ttagataattaaatatattaacggtcaaaattgtgcattggcatatgtgaagtagttgactt 39358369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 8042111 - 8042032
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| | |||||||||||||||||| |||||||| ||||| |||||||||||    
T  8042111 ttagaaaattaaagatattaacagtcaaaattatacattgacatatgtgaagtggttgacttggacatatattttgaaac 8042032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 13125230 - 13125155
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||  ||||||| |||||||||||||||||    
T  13125230 ataattaaagatattaacgatcaaaattgtacattggcatatgtgaagtgattgacttggacatgtattttgaaac 13125155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 32774767 - 32774844
Alignment:
Q  7 agataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||| || | |||||||| |||||||||||||||||    
T  32774767 agataattaaagatattaacggtcaaagttgcgcattgatatatgtaaaatggttgacttggacatgtattttgaaac 32774844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 36177669 - 36177590
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||| ||||||||||  |||||| ||||||||||| || |||||||| ||||||| ||||||||||||||||||    
T  36177669 ttagataattgaagatattaaaagtcaaagttgtgcattgatatgtgtgaagtggttgactgtgacatgtattttgaaac 36177590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 7800020 - 7800098
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    ||||||||||||||||||||||||||||| |||||||| | ||| |||||||| ||||||   ||||||||||||||||    
T  7800020 ttagataattaaagatattaacggtcaaagttgtgcataggcatgtgtgaagtggttgacaacgacatgtattttgaaa 7800098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 33228533 - 33228455
Alignment:
Q  6 tagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||| ||||||||| ||||| |||||||||||||| |||||||| |||||||   |||| |||||||||||    
T  33228533 tagataattaaatatattaacgatcaaagttgtgcattgacatgtgtgaagtggttgactgcaacatatattttgaaac 33228455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 19165867 - 19165819
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagt 57  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  19165867 ataattaaagatattaacggtcaaagttgtgcatcgacatatgtgaagt 19165819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 44645048 - 44645102
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttga 63  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||||| |||||    
T  44645048 ataattaaaaatattaacagtcaaaattgtgtattgacatatgtgaagtggttga 44645102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 6223239 - 6223318
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| ||||||||||||||||  |||||||| ||||||||||||||| |||| ||||| || || |||| |||| ||||    
T  6223239 ttagaaaattaaagatattaacaatcaaaattatgcattgacatatgtaaagtggttgatttggatatgtgttttaaaac 6223318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 13598935 - 13598978
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacat 48  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  13598935 ttagataattaaagatattaatggtcaaaattgtacattgacat 13598978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 24093154 - 24093083
Alignment:
Q  13 ttaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||   |||| ||||| |||||||| |||||||| |||||||  |||||||||||||||||    
T  24093154 ttaaagatattaacatacaaagttgtgaattgacatgtgtgaagtggttgactacgacatgtattttgaaac 24093083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 11931844 - 11931918
Alignment:
Q  11 aattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    ||||||||||||||| ||||||| ||||| |||| ||| | || ||| |||||||  ||||||||||||||||||    
T  11931844 aattaaagatattaatggtcaaagttgtgtattggcatgtttgcagtggttgactgcgacatgtattttgaaaca 11931918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 13443108 - 13443182
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtatttt 79  Q
    ||||||||||||| ||||||||  | |||||||| |||| |||||| |||||||||||| || ||||| ||||||    
T  13443108 ttagataattaaatatattaacaattaaaattgtacattaacatatatgaagtagttgagttcgacatatatttt 13443182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 32887080 - 32887131
Alignment:
Q  6 tagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagt 57  Q
    |||||||||||||||||||||  ||||  ||||| |||||||||||||||||    
T  32887080 tagataattaaagatattaacaatcaacgttgtgtattgacatatgtgaagt 32887131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 67856 - 67780
Alignment:
Q  8 gataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  67856 gataattaaagatattaacggtcaaaattgtgcattggcatatgtgaagtggttgacttagacatgtattttgaaac 67780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 4e-28; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 21540718 - 21540638
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||||||    
T  21540718 ttagataattaaagatattaacggtcaaaattgtgcattggcatgtgtgaagtggttgacttggacatgtattttgaaaca 21540638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 18668777 - 18668698
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||    
T  18668777 ttagataattaaagatattaacggtcaaaattgtgcattggcatatatgaagtggttgacttggacatgtattttgaaac 18668698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 20226383 - 20226308
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  20226383 ataattaaagatattaacggtaaaaattgtgcattggcatatgtgaagtggttgactttgacatgtattttgaaac 20226308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 22120367 - 22120292
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  22120367 ataattaaagatattaacggtaaaaattgtgcattggcatatgtgaagtggttgactttgacatgtattttgaaac 22120292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 32671991 - 32672068
Alignment:
Q  7 agataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  32671991 agataattaaagatattaacgatcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaac 32672068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 20437103 - 20437027
Alignment:
Q  8 gataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  20437103 gataattaaagatattaacggttaaaattatgcattgacatatgtgaagtggttgacttggacatgtattttgaaac 20437027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 22054945 - 22055024
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||  ||||||| |||||||||||||||||    
T  22054945 ttagataattaaagatattaacggtcaaaattatgcattggcatatgtgaagtgattgacttggacatgtattttgaaac 22055024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 17213881 - 17213801
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||| | |||||||| ||| ||||||||||||||    
T  17213881 ttagataattaaagatattaacggttaaaattgtgcattggcatatgtgaaatggttgacttagacgtgtattttgaaaca 17213801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 4148104 - 4148183
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||  |||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  4148104 ttagataattaaagatattaacaatcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 4148183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 24624030 - 24623951
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  24624030 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 24623951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 24955485 - 24955408
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaa 82  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||| | |||||||| |||||||||||||||    
T  24955485 ttagataattaaagatattaatagtcaaaattgtgcattgatatatgtgaaattgttgacttggacatgtattttgaa 24955408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 1040997 - 1041076
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||||| |||| |||||||| ||| |||||||||||||    
T  1040997 ttagataattaaatatattaacggttgaaattgtgcattgacatatgtaaagtggttgacttggacgtgtattttgaaac 1041076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 12226148 - 12226227
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||| ||||||||||| |||| ||| |||||||| |||||||| |||||||||||| ||||    
T  12226148 ttagataattaaagatattaacgatcaaaattgtgtattggcatgtgtgaagtggttgacttggacatgtattttaaaac 12226227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 19088047 - 19087968
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||  |||||||| |||||||||||||||||    
T  19088047 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagcggttgacttggacatgtattttgaaac 19087968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 32414768 - 32414689
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||  ||||||||||||||||    
T  32414768 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttgaacatgtattttgaaac 32414689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 2360167 - 2360243
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    ||||||||||||||||||||||||| ||||| |||| ||| |||| ||| ||||||| |||||||||||||||||||    
T  2360167 ataattaaagatattaacggtcaaagttgtgtattgtcatgtgtgtagtggttgactgtgacatgtattttgaaaca 2360243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 28477926 - 28477978
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagt 57  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28477926 ttagataattaaagatattaacggtcaaagttgtgcattgacatatgtgaagt 28477978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 29790379 - 29790431
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagt 57  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29790379 ttagataattaaagatattaacggtcaaagttgtgcattgacatatgtgaagt 29790431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 6563399 - 6563478
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||| | ||||||| |||||||||||| |||||||| ||||| |||||||||||    
T  6563399 ttagaaaattaaagatattaacagtcaaaaatatgcattggcatatgtgaagtggttgacttagacatatattttgaaac 6563478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 17257740 - 17257661
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||| ||||||| |||||||| ||| |||||||||||||    
T  17257740 ttagataattaaagatattaacagtcaaaattgaacattggcatacgtgaagtggttgacttggacttgtattttgaaac 17257661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 29694056 - 29694136
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    ||||||||||||| ||||||| ||||||| || |||| |||||||||||||||  ||||||  ||||||||||||||||||    
T  29694056 ttagataattaaatatattaatggtcaaagttatgcactgacatatgtgaagtgattgactacgacatgtattttgaaaca 29694136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 3989353 - 3989275
Alignment:
Q  6 tagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||||||||||||||||||| ||||||||||  |||||||||| ||||||  |||| || ||||||||||||||||||    
T  3989353 tagataattaaagatattaacgatcaaaattgt-tattgacatatatgaagtgattgatttggacatgtattttgaaaca 3989275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 10520641 - 10520707
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgaca 71  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||  |||| |||||||| ||||    
T  10520641 ttagataattaaagatattaacggtccaaattgtgcattggcatatggaaagtggttgacttggaca 10520707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 31869913 - 31869984
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttg 80  Q
    |||||||||||||||||  |||||||||||| |||||||| ||||  || | ||||| ||||||||||||||    
T  31869913 ataattaaagatattaatagtcaaaattgtgtattgacatgtgtgtggtggatgactctgacatgtattttg 31869984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 32530191 - 32530227
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattga 45  Q
    ||||||||| |||||||||||||||||||||||||||    
T  32530191 ataattaaaaatattaacggtcaaaattgtgcattga 32530227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 25475902 - 25475869
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgt 38  Q
    |||||||||||||||||||||| |||||||||||    
T  25475902 ttagataattaaagatattaacagtcaaaattgt 25475869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 31568878 - 31568833
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatat 50  Q
    |||||||||||||||||||||| ||||||||| | ||||| |||||    
T  31568878 ttagataattaaagatattaacagtcaaaattatacattggcatat 31568833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 2e-27; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 18094170 - 18094091
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||||||    
T  18094170 ttagataattaaagatattaacggtcaaaattgtgcattgtcatatgtgaaatggttgacttggacatgtattttgaaac 18094091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 27109861 - 27109940
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||    
T  27109861 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtggttgacttgaacatgtattttaaaac 27109940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 11251287 - 11251362
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttg 80  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  11251287 ttagataattaaagatattgacggtcaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttg 11251362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 40156371 - 40156453
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatg--tgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | |||| |||||||| ||||||||||||||||||    
T  40156371 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgaattaagtggttgacttggacatgtattttgaaaca 40156453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 978250 - 978329
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  978250 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 978329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 14634246 - 14634167
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  14634246 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 14634167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 33387392 - 33387471
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  33387392 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 33387471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 9502710 - 9502637
Alignment:
Q  11 aattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  9502710 aattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 9502637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 30354957 - 30354880
Alignment:
Q  7 agataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||    
T  30354957 agataattaaatatattaacagtcaaaattgtgcattgacatatgtgaagttgttgacttaaatatgtattttgaaac 30354880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 7224338 - 7224417
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||  ||||| | ||||||| |||||||||    
T  7224338 ttagataattaaagatattaacggtaaaaattgtgcattggcatatgtgaagtgattgacctggacatgtgttttgaaac 7224417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 34112130 - 34112209
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||  ||||||||||| ||||    
T  34112130 ttagataattaaagatattaaccgtcaaaattgtacattgacatgtgtgaagtggttgacttgaacatgtattttaaaac 34112209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 12446952 - 12446878
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||    
T  12446952 ataattaaagatgttaatggtcaaaattgtgcattgacatatgtgaagtgattgacttggacatatattttgaaa 12446878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 33587558 - 33587479
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||| || |||||||||||||| ||| ||||||||  ||||||| |||||||||||| ||||    
T  33587558 ttagataattaaagatattaacagtaaaaattgtgcattggcatgtgtgaagtgattgacttagacatgtattttaaaac 33587479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 8086119 - 8086041
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| |||||| || ||||||| |||||||||||| ||||||||  ||||||||||||||||    
T  8086119 ttagaaaattaaagatattaacagtcaaa-ttatgcattggcatatgtgaagtggttgacttgaacatgtattttgaaac 8086041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 11785815 - 11785736
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| | || | ||| |||| |||||||||||| ||||    
T  11785815 ttagataattaaatatattaacagtcaaaattgtgcattgacatatttaaaatggttaacttggacatgtattttaaaac 11785736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 7002597 - 7002517
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    ||||||||||||| |||| |||| ||||| |||||||||||||| | |||||| ||||| |  ||||||||||||||||||    
T  7002597 ttagataattaaatatatcaacgatcaaagttgtgcattgacatttatgaagtggttgaatgcgacatgtattttgaaaca 7002517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 18598705 - 18598785
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||||||| |||||||||||||||||| |||| ||||||||| |||||||| ||||| |  ||||| |||||| |||||    
T  18598705 ttagataatttaagatattaacggtcaaagttgtacattgacatgtgtgaagtggttgattgcgacatctattttaaaaca 18598785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 38916342 - 38916263
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| ||||||||||||||  |||||||||| ||| |||||||| ||||| |  ||||| |||||||||||    
T  38916342 ttagataattaaatatattaacggtcaaggttgtgcattggcatgtgtgaagtggttgattgcgacatatattttgaaac 38916263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 3472366 - 3472288
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    |||||||||||||||||||||| ||||||||| | |||| || ||| | |||| ||||||||  |||||||||||||||    
T  3472366 ttagataattaaagatattaacagtcaaaattatacattaacctatataaagtggttgacttgaacatgtattttgaaa 3472288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 12007586 - 12007518
Alignment:
Q  15 aaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    |||||||| |||||||||| |||||||||| ||| | |||||||||| ||  |||||||||||||||||    
T  12007586 aaagatatgaacggtcaaagttgtgcattggcatgtatgaagtagttaacaatgacatgtattttgaaa 12007518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 27579519 - 27579462
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttg 62  Q
    ||||||||||||||||||||||| ||||| || ||||||||||  |||||||| ||||    
T  27579519 ttagataattaaagatattaacgatcaaagttatgcattgacaagtgtgaagtggttg 27579462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 25889441 - 25889515
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||| |||||| |||| ||||||||| |||||||||||||||    |||||||  ||||||||||||||||    
T  25889441 ataattaaa-atattatcggttaaaattgtgtattgacatatgtgaacagattgacttgaacatgtattttgaaac 25889515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 9050661 - 9050632
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgt 38  Q
    ||||||||||||||||||||||||||||||    
T  9050661 ataattaaagatattaacggtcaaaattgt 9050632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 20692469 - 20692392
Alignment:
Q  8 gataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaaca 85  Q
    |||||| ||| |||||||| |||||| ||||||||| | || ||| ||||||||||||   ||||||||||| |||||    
T  20692469 gataataaaatatattaacagtcaaagttgtgcattaatatgtgtaaagtagttgactgccacatgtattttaaaaca 20692392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 2e-27; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 25171326 - 25171405
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||||||||||||||||    
T  25171326 ttagataattaaagatattaacggtcaaaattgtgtattggcatatgtgaaggggttgactttgacatgtattttgaaac 25171405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 36399273 - 36399350
Alignment:
Q  7 agataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  36399273 agataattaaagatattaacgatcaaaattgtgcattggcatatgtgaagttgttgacttggacatgtattttgaaac 36399350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 30003706 - 30003786
Alignment:
Q  5 ttagataattaaag-atattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  30003706 ttagataattaaaggatattaacggtcaaaattgtacattgacatatgtgaagtgattgactttgacatgtattttgaaac 30003786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 40771858 - 40771782
Alignment:
Q  8 gataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| |||||||||||||||||    
T  40771858 gataattaaagatattaacggtcaaaattgagcattgccatatgtgaagtggttgacttggacatgtattttgaaac 40771782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 9342734 - 9342655
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||  |||| |||||||||||    
T  9342734 ttagataattaaagatattaacggtcaaaattgtgcattggcatatgtgaagtggttgacttgaacatatattttgaaac 9342655  T

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Target: chr1; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 17306127 - 17306206
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||    
T  17306127 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtagttgacttggacatgtattttgaaac 17306206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 27292813 - 27292892
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| |||||||||||||||||| ||||||  |||||||||||| ||||||||||||||||||||||||||    
T  27292813 ttagataattaaatatattaacggtcaaaattatgcattagcatatgtgaagtggttgactttgacatgtattttgaaac 27292892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 40977577 - 40977498
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||    
T  40977577 ttagataattaaagatattaacagtcaaaattgtgcattggcatgtgtgaagtggttgacttggacatgtattttgaaac 40977498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 52024201 - 52024278
Alignment:
Q  7 agataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||    
T  52024201 agataattaaagatattaacgatcaaaattgtgcattggtatatgtgaagttgttgacttggacatgtattttgaaac 52024278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 6402499 - 6402420
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  6402499 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 6402420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 11641156 - 11641077
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  11641156 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 11641077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 36757575 - 36757496
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  36757575 ttagaaaattaaagatattaacagtcaaaattatgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 36757496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 42367385 - 42367306
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| || ||||||||||||||    
T  42367385 ttagataattaaagatattaacggtcaaaattgtgcattagcatatgtgaagtgattgacttggatatgtattttgaaac 42367306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 30701893 - 30701970
Alignment:
Q  7 agataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||| | |||||||| |||||||||||| ||||    
T  30701893 agataattaaaaatattaacgatcaaaattgtgcattgacatatgtgaatttgttgacttggacatgtattttaaaac 30701970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 16120528 - 16120449
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||| | |||| |||||||||| |||||||||||| ||||||||  ||||||||||||||||    
T  16120528 ttagataattaaagatattaacaggcaaagttgtgcattggcatatgtgaagtggttgacttgaacatgtattttgaaac 16120449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 42788631 - 42788558
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtatttt 79  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  42788631 ttagataattaat-atattaacggtcaaaattgtgcattgacatatgtgaagtagttgtcttgaacatgtatttt 42788558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 4302288 - 4302349
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactt 66  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  4302288 ttagataattaaagatattaacgattaaaattgtgcattggcatatgtgaagtagttgactt 4302349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 6766542 - 6766621
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| |||||||||||||||| ||||||||| ||||||  |||||||||||| ||||||||  ||||||||||||||||    
T  6766542 ttagaaaattaaagatattaactgtcaaaattatgcattagcatatgtgaagtggttgacttaaacatgtattttgaaac 6766621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 15912426 - 15912348
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| |||||| |||| |||||||||||||| |||||||||||| |||||||| |||||| ||||||||||    
T  15912426 ttagataattaaatatatta-cggttaaaattgtgcattggcatatgtgaagtggttgacttggacatgcattttgaaac 15912348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 42735250 - 42735176
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    |||||||||||||||||||||||||||||| ||||| ||| |||| |||  ||||||| ||||||||||||||||    
T  42735250 ataattaaagatattaacggtcaaaattgtacattggcatgtgtgtagtgattgacttggacatgtattttgaaa 42735176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 38153366 - 38153287
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| |  ||||||  || ||| ||||||||||    
T  38153366 ttagataattaaagatattaacggtcaaagttgtgcatttacatatgtgaactgattgactgcgatatgcattttgaaac 38153287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 7568586 - 7568507
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||| ||| | ||||||||| ||||||||||  |||||| ||||||||| |||  | |||||||||||    
T  7568586 ttagataattaaagattttagccgtcaaaattatgcattgacacgtgtgaaatagttgactgtgatgtatattttgaaac 7568507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 22575668 - 22575597
Alignment:
Q  13 ttaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||| ||||||||||||| |||| ||||||||   | |||||||  |||||||||||||||||    
T  22575668 ttaaagatattaatggtcaaaattgtgtattggcatatgtgtgatggttgactgcgacatgtattttgaaac 22575597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 44647794 - 44647723
Alignment:
Q  13 ttaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||||||||||||||||| |||||||||||||| | |||| | |||||||  ||  |||||||||||||    
T  44647794 ttaaagatattaacggtcaaagttgtgcattgacatgtatgaaatggttgactgcgatgtgtattttgaaac 44647723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 50972721 - 50972643
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaa 83  Q
    ||||||||||||| |||||||  ||||||||| || || | ||| ||||||||| ||||||  ||||||||||||||||    
T  50972721 ttagataattaaaaatattaagagtcaaaattttgaatcggcatgtgtgaagtaattgactgcgacatgtattttgaaa 50972643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 26910249 - 26910284
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgc 40  Q
    ||||||||||||||||||||||||||||||| ||||    
T  26910249 ttagataattaaagatattaacggtcaaaatagtgc 26910284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 48375180 - 48375254
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||| ||||| |||||| |||||||||||| ||||  || |||||||| ||| |||| |||||||||||||||||    
T  48375180 ataatcaaagaaattaacagtcaaaattgtg-attgggatgtgtgaagtggttcacttagacatgtattttgaaac 48375254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 16689996 - 16690062
Alignment:
Q  6 tagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacat 72  Q
    |||||||||||||||| ||| |||||||  ||||||||||||||| | ||||  |||||| ||||||    
T  16689996 tagataattaaagatactaatggtcaaagatgtgcattgacatatataaagtgattgactatgacat 16690062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 161926 - 161847
Alignment:
Q  5 ttagataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||    
T  161926 ttagataattaaagatattaacagtcaaaattgtgcattgacatatgtaaagtggttgacttgaacatgtattttgaaac 161847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 71143 - 71212
Alignment:
Q  15 aaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    ||||||| ||||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  71143 aaagataataacgatcaaaattgtgcattggcatatgtgaagtggttgacttggacatgtattttgaaac 71212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 13802 - 13727
Alignment:
Q  9 ataattaaagatattaacggtcaaaattgtgcattgacatatgtgaagtagttgactttgacatgtattttgaaac 84  Q
    |||||||| ||||||| | ||||||||| ||||||||||||||| |||| ||||||||  ||||||||||||||||    
T  13802 ataattaacgatattagcagtcaaaattttgcattgacatatgtaaagtggttgacttgaacatgtattttgaaac 13727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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