View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18998_low_16 (Length: 208)
Name: NF18998_low_16
Description: NF18998
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18998_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 36651334 - 36651509
Alignment:
| Q |
20 |
atttacactcatcaatttcttgtacagatattcaatggttttgcgtgacttcattccagaccttgccacaattgcagatgtagtctctaactgaatggag |
119 |
Q |
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| T |
36651334 |
atttacactcatcaatttcttgtacagatattcaatggtttcgcgtgacttcattccagatcttgccacaattgcagatgtagtctctaactgaatggag |
36651433 |
T |
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| Q |
120 |
cttttcatgagatagctttcggtcaaaatgaactcgtgactaagactttctttctcaagcggtttatctctgtgct |
195 |
Q |
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| T |
36651434 |
cttttcatgagatagctttcggtcaaaatgaactcgtgactaagactttctttctcaagcggtttatctctgtgct |
36651509 |
T |
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