View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18999_high_26 (Length: 239)
Name: NF18999_high_26
Description: NF18999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18999_high_26 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 849308 - 849534
Alignment:
| Q |
1 |
caacagtgatatggattgttaactaatactcaaagccaccaccagatacagtttacatcaaaaatgattacagcaaataccgacaaataaacgttataga |
100 |
Q |
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| T |
849308 |
caacagtgatatggattgttaactaatactcaaagccaccaccaggtacagtttacatcgtaaatgattacagcaaataccgacaaataaacgttataga |
849407 |
T |
|
| Q |
101 |
tacacagcaaataatttgtaaaacaagagtcccgaatgattctacctcaataatacatatcacatagaaaattaaacattcaaacagggtcacctgctat |
200 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
849408 |
tacacagcaaataatttgtaaaacacgagtcccgaatgattctacctcaataatacatatcacatagaaaattaaacattcaaacagggtcacctgctat |
849507 |
T |
|
| Q |
201 |
acgaatatggagaccggcttctatctc |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
849508 |
acgaatatggagaccggcttctatctc |
849534 |
T |
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