View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19001_high_9 (Length: 424)
Name: NF19001_high_9
Description: NF19001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19001_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 94 - 406
Target Start/End: Original strand, 30889529 - 30889841
Alignment:
| Q |
94 |
tgatgatttgaagattttcatgtgatacattgtgaataaaccaaagttgaagaactaaaagagagattttgaaaaattgaatccatggaaaagaatcaat |
193 |
Q |
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| T |
30889529 |
tgatgatttgaagattttcatgtgatacattgtgaataaaccaaagttgaagaactaaaagagagattttgaaaaattgaatccatggaaaagaatcaat |
30889628 |
T |
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| Q |
194 |
ttttagattaatcgcataagttgaattcatggaaaataatttaaaatttagaataatgataacgtttgaataaacctaaagaatggttttgataaaaata |
293 |
Q |
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| T |
30889629 |
ttttggattaatcgcataaattgaattcatggaaaataatttaaaatttaaaataatgataacgtttaaataaacctaaagaatggttttgataaaaata |
30889728 |
T |
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| Q |
294 |
ttaaaatttgagaatgaatttatgaagctaaaatggaatacttatttttccttgactctaaactatattgctaaaattgaagccttgaagtcatagaatg |
393 |
Q |
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| T |
30889729 |
ttaaaatttgagaatgaatttatgaagctaaaatcgaatacttatttttccttgactctaaactatattgctaaaattgaagccttgaagtcatagaatg |
30889828 |
T |
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| Q |
394 |
gagaccacatact |
406 |
Q |
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| T |
30889829 |
gaaaccacatact |
30889841 |
T |
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