View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19001_low_39 (Length: 251)
Name: NF19001_low_39
Description: NF19001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19001_low_39 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 30510913 - 30511139
Alignment:
| Q |
9 |
gataattcttccaatctagtcactcttccttaacagtaaccagattatttaataagacatattctcatccttcaaattgaaaatatacacccataaaatt |
108 |
Q |
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| T |
30510913 |
gataactcttccaatctagtcactcttccttaacagtaaccagattatttaataagacatattctcatccttcaaattgaaaatatacacccataaaatt |
30511012 |
T |
|
| Q |
109 |
ggaaacaaatagacattatttacaaactgtatggatatattttcgaagacttgagcaagtaaataagcacctcaacaaagctttaataagtgggtggacc |
208 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30511013 |
ggaaacaaatagacattatttaaaaactgtatggatatattttcgaagacttgagcaagtaaataagcacctcaacaaagctttaataagtgggtggacc |
30511112 |
T |
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| Q |
209 |
attctagctagttgatctaagaattat |
235 |
Q |
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||||||||||||||||||||||||||| |
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| T |
30511113 |
attctagctagttgatctaagaattat |
30511139 |
T |
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