View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19001_low_6 (Length: 601)

Name: NF19001_low_6
Description: NF19001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19001_low_6
NF19001_low_6
[»] chr7 (26 HSPs)
chr7 (249-527)||(2244329-2244590)
chr7 (1-169)||(2126947-2127115)
chr7 (1-169)||(2066860-2067028)
chr7 (5-169)||(2136325-2136489)
chr7 (1-169)||(2099687-2099855)
chr7 (1-169)||(2139553-2139721)
chr7 (1-168)||(2690825-2690992)
chr7 (1-169)||(2073961-2074128)
chr7 (9-169)||(2244649-2244809)
chr7 (1-169)||(2115057-2115213)
chr7 (235-328)||(2067094-2067187)
chr7 (461-572)||(2100178-2100289)
chr7 (470-572)||(2127396-2127499)
chr7 (235-328)||(2099921-2100014)
chr7 (235-328)||(2127181-2127276)
chr7 (461-572)||(2067415-2067525)
chr7 (235-328)||(2074194-2074296)
chr7 (18-167)||(2058605-2058754)
chr7 (235-335)||(2058822-2058925)
chr7 (105-165)||(1695696-1695756)
chr7 (238-305)||(2139790-2139857)
chr7 (348-449)||(2059002-2059102)
chr7 (238-305)||(2136557-2136624)
chr7 (235-334)||(2690658-2690758)
chr7 (385-449)||(2067286-2067350)
chr7 (390-449)||(2100086-2100145)
[»] chr1 (1 HSPs)
chr1 (107-168)||(24031851-24031912)


Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 249 - 527
Target Start/End: Complemental strand, 2244590 - 2244329
Alignment:
Q  249 aacaccattgtattttaatattttgaactcaatgttttggatgaaatgctagacacatacttagtgattcttatactaaaggaatggttgagaactacat 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| || |||||||    
T  2244590 aacaccattgtattttaatattttgaactcaatgttttggatgaaatggtagacacatactaagtggttcttatactaaaggaatggtttaggactacat 2244491  T
Q  349 cacatgtctatatcttgtgttatcccaatggagtatctaagttgatcaactccaaaaacaactttgtctcctttattgtttaaattccagaaaggtattt 448  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||                 |||||||||||||||    
T  2244490 cacatgtctatatcttgtgttatcccaatggagtagctaacttgatcaactccaaaaacaactttgtc-----------------tccagaaaggtattt 2244408  T
Q  449 gaagtttggttcatgcattttatacaagactttgatgtaacataatatgatctgtaatcaaattatgaggccaatccaa 527  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  2244407 gaagtttggttcatgcattttatacaagactttgatgtaacataatatgatctctaatcaaattatgtggccaatccaa 2244329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2126947 - 2127115
Alignment:
Q  1 gctcatgacatttaatgccatcccatgagcagcaatctgtgctgaaattccaagatgctgttttaggatacccaagaagattaccagaggctaagctgtt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||| | ||||||||||| | ||    
T  2126947 gctcatgacatttaatgccatcccatgagcaacaatctgtgctggaattccaagatgatgttttaggataaccaagaagatcatcagaggctaagttatt 2127046  T
Q  101 gatgacaaagccttccttaaattgcaacaaggcttggctttcatattgatgacactttggctgaatttg 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2127047 gatgacaaagccttccttaaattgcaacaaggcatggctttcatattgatgacactttggctgaatttg 2127115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2066860 - 2067028
Alignment:
Q  1 gctcatgacatttaatgccatcccatgagcagcaatctgtgctgaaattccaagatgctgttttaggatacccaagaagattaccagaggctaagctgtt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| | |||||||| ||| ||||||| |  |||||    
T  2066860 gctcatgacatttaatgccatcccatgagcaacaatctgtgctggaattccaagatgctgttttaggaaaaccaagaagcttatcagaggcaatcctgtt 2066959  T
Q  101 gatgacaaagccttccttaaattgcaacaaggcttggctttcatattgatgacactttggctgaatttg 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2066960 gatgacaaagccttccttaaattgcaacaaggcatggctttcatattgatgacactttggctgaatttg 2067028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 2136325 - 2136489
Alignment:
Q  5 atgacatttaatgccatcccatgagcagcaatctgtgctgaaattccaagatgctgttttaggatacccaagaagattaccagaggctaagctgttgatg 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||| | ||||||||||| | ||||||    
T  2136325 atgacatttaatgccatcccatgagcagcaatctgtgctggaattccaagatgatgttttaggataaccaagaagatcatcagaggctaagttattgatg 2136424  T
Q  105 acaaagccttccttaaattgcaacaaggcttggctttcatattgatgacactttggctgaatttg 169  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  2136425 acaaagccttccttaaattgcaacaaggcatggctttcatattgatgacattttggctgaatttg 2136489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2099687 - 2099855
Alignment:
Q  1 gctcatgacatttaatgccatcccatgagcagcaatctgtgctgaaattccaagatgctgttttaggatacccaagaagattaccagaggctaagctgtt 100  Q
    |||||||||||||||||||||||||||| || |||||||||||| | ||||||||||||||||| ||||| || ||||||||| ||||||||||| | ||    
T  2099687 gctcatgacatttaatgccatcccatgaacaacaatctgtgctggagttccaagatgctgtttttggataaccgagaagattatcagaggctaagttatt 2099786  T
Q  101 gatgacaaagccttccttaaattgcaacaaggcttggctttcatattgatgacactttggctgaatttg 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2099787 gatgacaaagccttccttaaattgcaacaaggcatggctttcatattgatgacactttggctgaatttg 2099855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2139553 - 2139721
Alignment:
Q  1 gctcatgacatttaatgccatcccatgagcagcaatctgtgctgaaattccaagatgctgttttaggatacccaagaagattaccagaggctaagctgtt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||| ||| ||||||| |   ||||    
T  2139553 gctcgtgacatttaatgccatcccatgagcagcaatctgtgctggaattccatgatgctgttttaggataaccaagaagcttatcagaggcaatcttgtt 2139652  T
Q  101 gatgacaaagccttccttaaattgcaacaaggcttggctttcatattgatgacactttggctgaatttg 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2139653 gatgacaaagccttccttaaattgcaacaaggcatggctttcatattgatgacactttggctgaatttg 2139721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 2690992 - 2690825
Alignment:
Q  1 gctcatgacatttaatgccatcccatgagcagcaatctgtgctgaaattccaagatgctgttttaggatacccaagaagattaccagaggctaagctgtt 100  Q
    |||| ||||||||||| |||||||| |||||||||||||||||| ||||||||| ||| ||||||||||| || ||||||||| | ||||||| | | ||    
T  2690992 gctcgtgacatttaattccatcccacgagcagcaatctgtgctggaattccaagctgccgttttaggataaccgagaagattatccgaggctaggttatt 2690893  T
Q  101 gatgacaaagccttccttaaattgcaacaaggcttggctttcatattgatgacactttggctgaattt 168  Q
    ||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  2690892 gataacaaagccttccttaaattgcaacaaggcatggctttcatatggatgacactttggctgaattt 2690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2073961 - 2074128
Alignment:
Q  1 gctcatgacatttaatgccatcccatgagcagcaatctgtgctgaaattccaagatgctgttttaggatacccaagaagattaccagaggctaagctgtt 100  Q
    ||||||||||||||| || |||||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||| | ||||||||||| | ||    
T  2073961 gctcatgacatttaacgc-atcccatgagcaacaatctgtgctggaattccaagatgatgttttaggataaccaagaagatcatcagaggctaagttatt 2074059  T
Q  101 gatgacaaagccttccttaaattgcaacaaggcttggctttcatattgatgacactttggctgaatttg 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    |||||||||||| ||||||||    
T  2074060 gatgacaaagccttccttaaattgcaacaaggcatggctttcatcaccatgacactttggatgaatttg 2074128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 2244809 - 2244649
Alignment:
Q  9 catttaatgccatcccatgagcagcaatctgtgctgaaattccaagatgctgttttaggatacccaagaagattaccagaggctaagctgttgatgacaa 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||| || |||||||| ||||| |  ||||||||  | ||||||||| | || |||||||    
T  2244809 catttaatgccatcccatgagcagcaatctgtgctggaattccatgaagctgttttcggataacttagaagatttgctgaggctaagttattaatgacaa 2244710  T
Q  109 agccttccttaaattgcaacaaggcttggctttcatattgatgacactttggctgaatttg 169  Q
    |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2244709 agccttgctttaattgcaacaaagcttggctttcatattgatgacactttggctgaatttg 2244649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2115057 - 2115213
Alignment:
Q  1 gctcatgacatttaatgccatcccatgagcagcaatctgtgctgaaattccaagatgctgttttaggatacccaagaagattaccagaggctaagctgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |            ||||  ||||||| | ||    
T  2115057 gctcatgacatttaatgccatcccatgagcagcaatctgtgctggaattccaagatgctatttttggaga------------accatgggctaagttatt 2115144  T
Q  101 gatgacaaagccttccttaaattgcaacaaggcttggctttcatattgatgacactttggctgaatttg 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    |||||||||||| ||||||||    
T  2115145 gatgacaaagccttccttaaattgcaacaaggcatggctttcatcaccatgacactttggatgaatttg 2115213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 2067094 - 2067187
Alignment:
Q  235 caagagaccacacaaacaccattgtattttaatattttgaactcaatgttttggatgaaatgctagacacatacttagtgattcttatactaaa 328  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  2067094 caagagacctgacaaacaccattgtattttaatattttgaactgaatgttttggatgaaatgctagacacatactaagtaattcttatagtaaa 2067187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 461 - 572
Target Start/End: Original strand, 2100178 - 2100289
Alignment:
Q  461 atgcattttatacaagactttgatgtaacataatatgatctgtaatcaaattatgaggccaatccaagagacaaggtctatttaatgttttatcatgtcg 560  Q
    |||||| |||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||| | | ||||||||||| |||||||||||||| |    
T  2100178 atgcatattatacaagactttgatgtaacatgatatgatctttaatcaaaatatgtggccaatccaatacagaaggtctatttgatgttttatcatgtag 2100277  T
Q  561 tgaagctttctt 572  Q
    ||| ||||||||    
T  2100278 tgaggctttctt 2100289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 470 - 572
Target Start/End: Original strand, 2127396 - 2127499
Alignment:
Q  470 atacaagactttgatgtaacataatatgatctgtaatcaaattatg-aggccaatccaagagacaaggtctatttaatgttttatcatgtcgtgaagctt 568  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||||| | ||||||||||||| |||||||||||||| |||| ||||    
T  2127396 atacaagactttgatgtaacataatataatctctaatcaaattatgtgggccaatccaatacacaaggtctatttgatgttttatcatgtagtgaggctt 2127495  T
Q  569 tctt 572  Q
    ||||    
T  2127496 tctt 2127499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 2099921 - 2100014
Alignment:
Q  235 caagagaccacacaaacaccattgtattttaatattttgaactcaatgttttggatgaaatgctagacacatacttagtgattcttatactaaa 328  Q
    |||||||||  |||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||| || ||||||||||||| ||||    
T  2099921 caagagacctgacaaacaccattgtattttaatattttgaagtgaatgttttggatgaaaagctagacacatgctaagtgattcttatagtaaa 2100014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 2127181 - 2127276
Alignment:
Q  235 caagagaccacacaaacaccattgtat--tttaatattttgaactcaatgttttggatgaaatgctagacacatacttagtgattcttatactaaa 328  Q
    |||||||||  ||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  2127181 caagagacctgacaaacaccattgtatattttaatattttgaactgaatgttttggatgaaatgctagacacatagtaagtgattcttatagtaaa 2127276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 461 - 572
Target Start/End: Original strand, 2067415 - 2067525
Alignment:
Q  461 atgcattttatacaagactttgatgtaacataatatgatctgtaatcaaattatgaggccaatccaagagacaaggtctatttaatgttttatcatgtcg 560  Q
    |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| | |||||||||| || |||||||| |||||      
T  2067415 atgcatattatacaagactttgatgtaacataatataatctctaatcaaattatgtggccaatccaatacacaaggtcta-ttgatgttttaccatgtaa 2067513  T
Q  561 tgaagctttctt 572  Q
    ||| ||||||||    
T  2067514 tgaggctttctt 2067525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 2074194 - 2074296
Alignment:
Q  235 caagagaccacacaaacaccattgtattttaatattttgaactcaat---------gttttggatgaaatgctagacacatacttagtgattcttatact 325  Q
    |||||||||  |||||||||||||||||||||||||||||||| |||         |||||||||||||||||||||||||||| ||||||||||||| |    
T  2074194 caagagacctgacaaacaccattgtattttaatattttgaactgaataaagtgaatgttttggatgaaatgctagacacatactaagtgattcttatagt 2074293  T
Q  326 aaa 328  Q
    |||    
T  2074294 aaa 2074296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 2058605 - 2058754
Alignment:
Q  18 ccatcccatgagcagcaatctgtgctgaaattccaagatgctgttttaggatacccaagaagattaccagaggctaagctgttgatgacaaagccttcct 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |  ||| | |   | ||||||    ||||||||  |||||||||||    
T  2058605 ccatcccatgagcagcaatctgtgctggaattccaagatgctgctttaggataactgagagggtactcggaggctttcttgttgatgttaaagccttcct 2058704  T
Q  118 taaattgcaacaaggcttggctttcatattgatgacactttggctgaatt 167  Q
    ||||||| || || || ||||||||||  | |||||||||||||| ||||    
T  2058705 taaattgtaagaaagcatggctttcatcatcatgacactttggcttaatt 2058754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 2058822 - 2058925
Alignment:
Q  235 caagagaccacacaaacacca---ttgtattttaatattttgaactcaatgttttggatgaaatgctagacacatacttagtgattcttatactaaagga 331  Q
    |||||||||| ||||||||||   |||||| |||||||||||| || || |||||| ||||||||||||||||||||| |||| ||||||||  ||||||    
T  2058822 caagagaccagacaaacaccaatattgtatcttaatattttgagctgaaagttttgaatgaaatgctagacacatactaagtggttcttatagcaaagga 2058921  T
Q  332 atgg 335  Q
    ||||    
T  2058922 atgg 2058925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 1695756 - 1695696
Alignment:
Q  105 acaaagccttccttaaattgcaacaaggcttggctttcatattgatgacactttggctgaa 165  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  1695756 acaaagccttccttaaattgtaacaaggcatggctttcatcttgatgacactttggctgaa 1695696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 238 - 305
Target Start/End: Original strand, 2139790 - 2139857
Alignment:
Q  238 gagaccacacaaacaccattgtattttaatattttgaactcaatgttttggatgaaatgctagacaca 305  Q
    ||||||| |||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||    
T  2139790 gagaccatacaaacaccattgtatttgaatattttgaactgtgtgttttggatgaaatgctagacaca 2139857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 348 - 449
Target Start/End: Original strand, 2059002 - 2059102
Alignment:
Q  348 tcacatgtctatatcttgtgttatcccaatggagtatctaagttgatcaactccaaaaacaactttgtctcctttattgtttaaattccagaaaggtatt 447  Q
    ||||| ||||||||||||  ||| |||| |||||   |||| ||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||    
T  2059002 tcacaagtctatatcttggcttagcccattggagaggctaacttgatcaactccaaaaaaaa-tttgtctccattattgtttaaattccagaaagatatt 2059100  T
Q  448 tg 449  Q
    ||    
T  2059101 tg 2059102  T

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Target: chr7; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 238 - 305
Target Start/End: Original strand, 2136557 - 2136624
Alignment:
Q  238 gagaccacacaaacaccattgtattttaatattttgaactcaatgttttggatgaaatgctagacaca 305  Q
    |||||||||||||||||||||||||| ||||||||||| |   | |||||||||||||||||||||||    
T  2136557 gagaccacacaaacaccattgtatttgaatattttgaaattggtcttttggatgaaatgctagacaca 2136624  T

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Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 2690758 - 2690658
Alignment:
Q  235 caagagaccacacaaacaccattgtattttaatattttgaactcaatgttttggatgaaatgctagacacatacttagtgattcttata--ctaaaggaa 332  Q
    |||||||||| |||||||||||||||| |||||| ||| | || ||  |||| ||||||||||||||||| ||||  ||| ||||||||  |||||||||    
T  2690758 caagagaccagacaaacaccattgtatcttaatactttaatctgaaaatttt-gatgaaatgctagacacgtactaggtggttcttatatgctaaaggaa 2690660  T
Q  333 tg 334  Q
    ||    
T  2690659 tg 2690658  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 449
Target Start/End: Original strand, 2067286 - 2067350
Alignment:
Q  385 ctaagttgatcaactccaaaaacaactttgtctccttta-ttgtttaaattccagaaaggtatttg 449  Q
    |||| |||||||||||||||||  ||||||||||||||| ||  ||||||||||| ||||||||||    
T  2067286 ctaacttgatcaactccaaaaa-tactttgtctcctttatttccttaaattccaggaaggtatttg 2067350  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 449
Target Start/End: Original strand, 2100086 - 2100145
Alignment:
Q  390 ttgatcaactccaaaaacaactttgtctcctttattgt-ttaaattccagaaaggtatttg 449  Q
    ||||||||||||||||| | ||||||||||||||||   ||||||||||| ||||||||||    
T  2100086 ttgatcaactccaaaaata-ctttgtctcctttatttccttaaattccaggaaggtatttg 2100145  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 24031851 - 24031912
Alignment:
Q  107 aaagccttccttaaattgcaacaaggcttggctttcatattgatgacactttggctgaattt 168  Q
    |||| ||||||||| |||||||| ||| ||||||||||||| ||||| || || ||||||||    
T  24031851 aaagtcttccttaacttgcaacagggcatggctttcatattcatgaccctatgactgaattt 24031912  T

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