View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19002_low_1 (Length: 627)

Name: NF19002_low_1
Description: NF19002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19002_low_1
NF19002_low_1
[»] chr8 (38 HSPs)
chr8 (15-627)||(45547712-45548333)
chr8 (225-448)||(45540318-45540534)
chr8 (225-305)||(45540695-45540776)
chr8 (102-249)||(32924167-32924313)
chr8 (128-274)||(32975698-32975845)
chr8 (350-447)||(24504057-24504154)
chr8 (128-274)||(34286492-34286638)
chr8 (139-274)||(38895681-38895817)
chr8 (128-274)||(24350447-24350594)
chr8 (350-430)||(13089766-13089850)
chr8 (350-446)||(8444263-8444356)
chr8 (104-277)||(14942411-14942585)
chr8 (171-268)||(25465781-25465878)
chr8 (102-274)||(32131425-32131598)
chr8 (128-274)||(41145324-41145473)
chr8 (139-250)||(14724918-14725029)
chr8 (105-274)||(16972284-16972455)
chr8 (194-249)||(25333655-25333710)
chr8 (128-271)||(28879069-28879210)
chr8 (161-277)||(2563402-2563519)
chr8 (202-266)||(24087256-24087321)
chr8 (151-274)||(10298855-10298978)
chr8 (350-437)||(24581449-24581536)
chr8 (102-181)||(26046978-26047057)
chr8 (171-277)||(30974043-30974150)
chr8 (128-277)||(2669659-2669809)
chr8 (194-271)||(9131059-9131137)
chr8 (217-274)||(10213795-10213853)
chr8 (102-148)||(11988308-11988354)
chr8 (103-148)||(29713289-29713334)
chr8 (194-274)||(35055499-35055579)
chr8 (161-250)||(36907597-36907686)
chr8 (194-274)||(37410841-37410922)
chr8 (194-274)||(42102183-42102264)
chr8 (97-145)||(2669763-2669811)
chr8 (217-274)||(8752906-8752965)
chr8 (157-237)||(9782223-9782303)
chr8 (106-277)||(19925546-19925718)
[»] chr2 (32 HSPs)
chr2 (102-277)||(21788442-21788618)
chr2 (350-448)||(2702258-2702356)
chr2 (350-447)||(12410790-12410887)
chr2 (350-447)||(12422850-12422947)
chr2 (350-432)||(27271658-27271740)
chr2 (350-447)||(6764423-6764520)
chr2 (350-447)||(37647968-37648065)
chr2 (170-271)||(8832510-8832612)
chr2 (119-274)||(4004821-4004977)
chr2 (102-271)||(4026911-4027080)
chr2 (97-191)||(34913402-34913496)
chr2 (350-439)||(11031809-11031898)
chr2 (106-274)||(15155802-15155971)
chr2 (102-274)||(33321240-33321413)
chr2 (149-250)||(42064883-42064984)
chr2 (357-437)||(34394492-34394572)
chr2 (140-274)||(36501443-36501578)
chr2 (194-271)||(38216096-38216174)
chr2 (130-277)||(11776997-11777145)
chr2 (128-274)||(25836641-25836787)
chr2 (105-250)||(29774733-29774878)
chr2 (102-274)||(37409628-37409801)
chr2 (97-145)||(21788572-21788620)
chr2 (184-252)||(35731203-35731271)
chr2 (104-275)||(38471718-38471890)
chr2 (102-181)||(755764-755843)
chr2 (172-274)||(30382197-30382300)
chr2 (184-250)||(7480852-7480918)
chr2 (184-277)||(12950040-12950134)
chr2 (201-274)||(22898285-22898359)
chr2 (193-250)||(23956217-23956274)
chr2 (161-249)||(16108076-16108164)
[»] chr7 (32 HSPs)
chr7 (97-277)||(44613398-44613579)
chr7 (350-447)||(28782015-28782112)
chr7 (350-448)||(1032222-1032320)
chr7 (350-447)||(9948933-9949030)
chr7 (350-434)||(11621380-11621464)
chr7 (350-447)||(9942602-9942699)
chr7 (102-246)||(48021605-48021748)
chr7 (149-274)||(39279461-39279588)
chr7 (97-250)||(28759790-28759946)
chr7 (102-274)||(29390479-29390651)
chr7 (350-430)||(40871302-40871382)
chr7 (104-274)||(22032749-22032920)
chr7 (128-274)||(29378656-29378803)
chr7 (157-277)||(47654339-47654460)
chr7 (139-277)||(37465811-37465951)
chr7 (128-250)||(47648549-47648670)
chr7 (102-274)||(38372543-38372716)
chr7 (138-250)||(14691252-14691364)
chr7 (104-271)||(22575573-22575741)
chr7 (217-271)||(33204934-33204989)
chr7 (194-274)||(16932858-16932939)
chr7 (194-274)||(16938241-16938322)
chr7 (194-274)||(16958892-16958973)
chr7 (194-274)||(33288003-33288084)
chr7 (112-274)||(34922926-34923091)
chr7 (128-277)||(35809101-35809251)
chr7 (141-250)||(8180544-8180653)
chr7 (113-275)||(43391717-43391880)
chr7 (217-277)||(43818803-43818864)
chr7 (128-274)||(20888584-20888732)
chr7 (102-146)||(22515564-22515608)
chr7 (97-145)||(44613396-44613444)
[»] chr4 (48 HSPs)
chr4 (97-277)||(41228883-41229064)
chr4 (350-447)||(43499300-43499397)
chr4 (97-271)||(46704201-46704375)
chr4 (350-448)||(39059723-39059821)
chr4 (138-274)||(18630823-18630960)
chr4 (353-430)||(37870649-37870726)
chr4 (102-269)||(29877624-29877792)
chr4 (102-274)||(23297423-23297593)
chr4 (351-446)||(36651742-36651837)
chr4 (128-274)||(48591352-48591499)
chr4 (350-448)||(9896508-9896606)
chr4 (130-250)||(36298344-36298465)
chr4 (102-249)||(18424232-18424378)
chr4 (97-191)||(212960-213053)
chr4 (128-274)||(2547975-2548122)
chr4 (140-274)||(17222852-17222987)
chr4 (128-250)||(896981-897103)
chr4 (353-447)||(7743575-7743669)
chr4 (105-271)||(42611799-42611966)
chr4 (102-211)||(7206578-7206687)
chr4 (97-273)||(8057017-8057194)
chr4 (128-271)||(36740915-36741059)
chr4 (102-249)||(38345776-38345922)
chr4 (353-447)||(42718574-42718669)
chr4 (128-250)||(7148783-7148905)
chr4 (105-274)||(12495572-12495744)
chr4 (350-439)||(23106753-23106842)
chr4 (97-274)||(11298573-11298740)
chr4 (128-223)||(43983362-43983457)
chr4 (194-252)||(48721897-48721955)
chr4 (105-181)||(948060-948136)
chr4 (102-181)||(3564205-3564284)
chr4 (201-271)||(8130563-8130634)
chr4 (102-181)||(43699505-43699584)
chr4 (97-148)||(46175902-46175953)
chr4 (201-274)||(14987528-14987602)
chr4 (215-271)||(30956782-30956839)
chr4 (174-274)||(31022457-31022558)
chr4 (171-271)||(35405738-35405838)
chr4 (202-274)||(42617158-42617231)
chr4 (194-274)||(47202902-47202983)
chr4 (170-250)||(22397258-22397338)
chr4 (202-250)||(24031165-24031213)
chr4 (217-272)||(34526267-34526323)
chr4 (102-249)||(43415242-43415390)
chr4 (194-277)||(46175904-46175988)
chr4 (350-422)||(48640764-48640836)
chr4 (357-437)||(54898895-54898975)
[»] chr1 (48 HSPs)
chr1 (97-277)||(9572709-9572891)
chr1 (350-439)||(19227887-19227976)
chr1 (350-447)||(33766359-33766456)
chr1 (97-277)||(46689475-46689656)
chr1 (350-447)||(51534478-51534575)
chr1 (350-438)||(4532087-4532175)
chr1 (102-250)||(46473079-46473227)
chr1 (102-274)||(13038932-13039105)
chr1 (128-274)||(26988159-26988306)
chr1 (128-274)||(28122627-28122776)
chr1 (105-250)||(4068103-4068248)
chr1 (350-430)||(34549383-34549463)
chr1 (350-430)||(45432374-45432454)
chr1 (357-433)||(33936450-33936526)
chr1 (128-277)||(36422906-36423056)
chr1 (350-447)||(13182647-13182744)
chr1 (129-273)||(15515276-15515421)
chr1 (150-274)||(37712100-37712225)
chr1 (111-250)||(35282547-35282686)
chr1 (128-274)||(37329340-37329487)
chr1 (104-250)||(51162256-51162402)
chr1 (104-252)||(12256594-12256741)
chr1 (102-249)||(26946058-26946206)
chr1 (128-271)||(48819310-48819454)
chr1 (105-271)||(10365159-10365325)
chr1 (128-274)||(16888897-16889040)
chr1 (104-211)||(49971238-49971345)
chr1 (128-250)||(6337709-6337831)
chr1 (201-269)||(10849999-10850068)
chr1 (140-250)||(12828145-12828257)
chr1 (97-250)||(25485728-25485881)
chr1 (170-250)||(36259244-36259324)
chr1 (232-274)||(1565303-1565345)
chr1 (108-274)||(35897547-35897718)
chr1 (194-274)||(15791460-15791541)
chr1 (114-250)||(26542970-26543106)
chr1 (128-248)||(3069809-3069929)
chr1 (194-277)||(19395851-19395935)
chr1 (194-250)||(50919564-50919620)
chr1 (140-274)||(41196638-41196773)
chr1 (201-274)||(5347238-5347312)
chr1 (217-251)||(10082351-10082385)
chr1 (194-274)||(3115990-3116071)
chr1 (97-145)||(9572707-9572755)
chr1 (102-250)||(20169249-20169397)
chr1 (227-274)||(28690114-28690162)
chr1 (194-277)||(42591459-42591543)
chr1 (227-274)||(47413482-47413530)
[»] chr3 (31 HSPs)
chr3 (109-277)||(32901073-32901242)
chr3 (128-274)||(43971775-43971922)
chr3 (97-274)||(3876191-3876369)
chr3 (102-277)||(33946475-33946643)
chr3 (102-270)||(34707645-34707814)
chr3 (128-272)||(43079864-43080009)
chr3 (102-274)||(51409378-51409550)
chr3 (128-274)||(40240505-40240652)
chr3 (102-274)||(22809121-22809295)
chr3 (102-266)||(40581012-40581178)
chr3 (105-245)||(53217998-53218138)
chr3 (193-277)||(36266307-36266392)
chr3 (128-274)||(585031-585177)
chr3 (201-277)||(38524172-38524249)
chr3 (102-213)||(29270346-29270457)
chr3 (194-275)||(25341347-25341429)
chr3 (128-250)||(42956132-42956254)
chr3 (128-250)||(45331248-45331370)
chr3 (213-277)||(4974407-4974472)
chr3 (104-181)||(10448761-10448838)
chr3 (194-274)||(17752059-17752140)
chr3 (194-274)||(19053379-19053460)
chr3 (170-274)||(20174868-20174973)
chr3 (201-277)||(43376779-43376856)
chr3 (204-250)||(27769736-27769782)
chr3 (170-274)||(48597794-48597900)
chr3 (357-422)||(50642392-50642457)
chr3 (157-250)||(53787705-53787798)
chr3 (132-240)||(3870189-3870297)
chr3 (203-274)||(31787608-31787680)
chr3 (201-274)||(52895333-52895407)
[»] chr6 (27 HSPs)
chr6 (97-271)||(6758607-6758783)
chr6 (102-277)||(23239232-23239408)
chr6 (100-274)||(29623406-29623580)
chr6 (119-273)||(32675818-32675973)
chr6 (97-276)||(2040107-2040292)
chr6 (102-270)||(21891270-21891439)
chr6 (102-237)||(3829885-3830020)
chr6 (128-272)||(2034159-2034304)
chr6 (350-430)||(12912248-12912328)
chr6 (351-439)||(24393921-24394009)
chr6 (102-250)||(10873971-10874117)
chr6 (101-249)||(2255718-2255866)
chr6 (170-277)||(10184255-10184363)
chr6 (351-430)||(165531-165610)
chr6 (357-439)||(18972621-18972703)
chr6 (220-276)||(6752915-6752972)
chr6 (128-271)||(2027107-2027251)
chr6 (149-252)||(7576812-7576915)
chr6 (201-274)||(10755211-10755285)
chr6 (194-274)||(9764319-9764400)
chr6 (128-181)||(24625862-24625915)
chr6 (201-268)||(10730142-10730210)
chr6 (104-191)||(6632646-6632733)
chr6 (232-274)||(23239232-23239275)
chr6 (217-271)||(35071359-35071414)
chr6 (102-250)||(10687292-10687443)
chr6 (97-145)||(23239362-23239410)
[»] chr5 (37 HSPs)
chr5 (128-266)||(13625456-13625596)
chr5 (350-443)||(19021396-19021489)
chr5 (350-446)||(22639563-22639659)
chr5 (106-246)||(42852011-42852150)
chr5 (128-274)||(40152804-40152951)
chr5 (350-447)||(39143220-39143317)
chr5 (102-250)||(7364262-7364410)
chr5 (128-271)||(28625491-28625635)
chr5 (128-271)||(24030226-24030369)
chr5 (108-250)||(13060555-13060697)
chr5 (157-274)||(35536885-35537002)
chr5 (350-447)||(6537080-6537176)
chr5 (102-274)||(29922117-29922290)
chr5 (194-274)||(40697083-40697164)
chr5 (129-272)||(11912032-11912176)
chr5 (104-246)||(43318990-43319132)
chr5 (102-249)||(2878631-2878777)
chr5 (119-250)||(17657244-17657375)
chr5 (129-211)||(1868858-1868940)
chr5 (102-180)||(22201959-22202037)
chr5 (193-254)||(11163231-11163292)
chr5 (102-187)||(17128263-17128348)
chr5 (157-250)||(28357181-28357274)
chr5 (102-277)||(1371921-1372094)
chr5 (101-181)||(10537241-10537321)
chr5 (149-249)||(41419533-41419633)
chr5 (357-416)||(926759-926818)
chr5 (220-274)||(6125389-6125444)
chr5 (128-274)||(6144749-6144896)
chr5 (106-181)||(11991294-11991369)
chr5 (170-248)||(38498623-38498699)
chr5 (149-274)||(40452405-40452532)
chr5 (132-274)||(41059717-41059860)
chr5 (140-246)||(23087736-23087842)
chr5 (170-250)||(27805968-27806048)
chr5 (192-274)||(41125748-41125832)
chr5 (227-274)||(42558645-42558693)
[»] scaffold0300 (1 HSPs)
scaffold0300 (350-446)||(9581-9677)
[»] scaffold0041 (1 HSPs)
scaffold0041 (350-430)||(94900-94980)
[»] scaffold1367 (1 HSPs)
scaffold1367 (97-271)||(1038-1213)
[»] scaffold0037 (1 HSPs)
scaffold0037 (350-430)||(997-1077)
[»] scaffold0157 (1 HSPs)
scaffold0157 (105-274)||(24733-24905)
[»] scaffold0057 (1 HSPs)
scaffold0057 (102-274)||(24317-24489)


Alignment Details
Target: chr8 (Bit Score: 452; Significance: 0; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 15 - 627
Target Start/End: Complemental strand, 45548333 - 45547712
Alignment:
Q  15 ccagtcccagacttgaagtcggatcacaaagccatccatgaaagaaatagcgtgtaaataccagagaaagccttttggccgattggattgagcttatgca 114  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  45548333 ccagtcccagacttgaagtcggatctcaaagccatccatgaaagaaatagcgtggaaataccggagaaagccttttggccgattggattgagcttatgca 45548234  T
Q  115 aaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaata 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  45548233 aaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaaatacaacttaggaagataaaattttcattaata 45548134  T
Q  215 aaaacttatgagttaatataaaagcttatttatttgtaaagatatttttcataagctcaatcccaatcagggcccatgtggttgtggtaaatttaatttt 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548133 aaaacttatgagttaatataaaagcttatttatttgtaaagatatttttcataagctcaatcccaatcagggcccatgtggttgtggtaaatttaatttt 45548034  T
Q  315 tttatttgtctaccaaaaatagtttgnnnnnnnnnaagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccc 414  Q
    ||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||| |||| |||||| ||||||||| |||||||||||    
T  45548033 tttatttttctaccaaaaatagttt--ttttttttaagaaactaaaatggattaaattactgaaagcctggagatttcagcacaaggagtgccaaaaccc 45547936  T
Q  415 cagctgaaagagtcaattacaagaatgccaaaacaggaataaaaaagaaagctacc------cgtaaatattcccaagcatggtaaagggatattatcgg 508  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      |||||||||||||||||| |||||||||||||||||||    
T  45547935 cagctgaaagagtcaattacaagaatgccaaaacaggaacaaaaaagaaagctaccctgttacgtaaatattcccaagcaaggtaaagggatattatcgg 45547836  T
Q  509 agatttagttgaacaaaatataacatcagatttcccatggccaaaaccgg-----aacnnnnnnnnnnctaccctgttacgtaatatttcccaagcaacg 603  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |     ||           ||||||||||||||||||||||||||||||||    
T  45547835 agatttagttgaacaaaatataacatcagatttcccatggccaaaacatgaagaaaaaaaaaagaaagctaccctgttacgtaatatttcccaagcaacg 45547736  T
Q  604 cagatgattgatagacataatcgt 627  Q
    ||||||||||||||||||||||||    
T  45547735 cagatgattgatagacataatcgt 45547712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 225 - 448
Target Start/End: Complemental strand, 45540534 - 45540318
Alignment:
Q  225 agttaatataaaagcttatttatttgtaaagatatttttcataagctcaatcccaatcagggcccatgtggttgtggtaaatttaatttttttatttgtc 324  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  45540534 agttaatataaaagtttatttatttgtaaaaatatttttcataagttcaatcccaatcagggcctatgtggttgtggtaaatttaatttttttatttttc 45540435  T
Q  325 taccaaaaatagtttgnnnnnnnnnaagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaag 424  Q
    ||   ||||||||||          |||||||||||| |||||||||||||||||| |    |||||| ||||||||| ||||||||||||| || ||||    
T  45540434 tattcaaaatagttt----ttttttaagaaactaaaacggattaaattactgaaagcc---agatttcagcacaaggaatgccaaaaccccaactaaaag 45540342  T
Q  425 agtcaattacaagaatgccaaaac 448  Q
    |||||||| ||||||||| |||||    
T  45540341 agtcaattgcaagaatgctaaaac 45540318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 225 - 305
Target Start/End: Complemental strand, 45540776 - 45540695
Alignment:
Q  225 agttaatataaaagcttatttatttgtaaagatattttt-cataagctcaatcccaatcagggcccatgtggttgtggtaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  45540776 agttaatataaaagcttatttatttgtaaagatattttttcataagttcaatcccaatcagggcctatgtggttgtggtaaa 45540695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 102 - 249
Target Start/End: Complemental strand, 32924313 - 32924167
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| | || |||  |||||||| |||||||||| ||||| | ||||||||| |  ||||||||||||  ||||||||  ||||||||    
T  32924313 ttgagcttatgcaaaacagcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatgaagataaa 32924214  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 249  Q
    |||||| ||| | ||||||||||| |||||||||||||||||||||||    
T  32924213 attttc-ttagtgaaaacttatgaattaatataaaagcttatttattt 32924167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 128 - 274
Target Start/End: Original strand, 32975698 - 32975845
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |||||| |||  | | ||||||||| |    
T  32975698 aaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgagaacttatgaat 32975797  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  32975798 taatataaaagcttatttatttgcataagctatttttcataagctcaa 32975845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 24504154 - 24504057
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    |||||||||||||||||||||  ||||||||  | | |||||| ||||||||| |||||||||| ||||| |||||||||||||||||  ||||||||    
T  24504154 aagaaactaaaatggattaaaaaactgaaagcatagagatttcagcacaaggaatgccaaaacctcagctaaaagagtcaattacaagtgtgccaaaa 24504057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 274
Target Start/End: Complemental strand, 34286638 - 34286492
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  |||||| |||||  ||| ||||  |||||| |||||||||||   | ||||||||| |    
T  34286638 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtgaaaa-acagcttatgaagatacaattttcgttagggagaacttatgaat 34286540  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||||||    
T  34286539 taatataaaagcttatttatttgcataacctatttttcataagctcaa 34286492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 274
Target Start/End: Original strand, 38895681 - 38895817
Alignment:
Q  139 cttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaag 238  Q
    ||||||||| ||||||| |||||||||||  ||||||||||||  | || |||  |||||| ||| || |||| | ||||||||| | |||||||||||     
T  38895681 cttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttagtgaaaacttataaattaatataaaaa 38895780  T
Q  239 cttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||||||||||| ||  || |||||||||||||||    
T  38895781 cttatttatttgtataaactaattttcataagctcaa 38895817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 274
Target Start/End: Complemental strand, 24350594 - 24350447
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    |||||| || |||||||| | ||||||| |||||||| ||  || |||||||||  | | ||||  |||||| ||||||||||| ||| ||||||||| |    
T  24350594 aaataattaagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagtaagaacttatgaat 24350495  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  24350494 taacataaaatcttatttatttgcataagctagttttcataagctcaa 24350447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 430
Target Start/End: Original strand, 13089766 - 13089850
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggat----tgccaaaaccccagctgaaagagtcaa 430  Q
    ||||| ||||||||||||| |||||| |||| |||| |||||| |||||||||     |||||||||||||||||||||||||||    
T  13089766 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggaaggagtgccaaaaccccagctgaaagagtcaa 13089850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 350 - 446
Target Start/End: Original strand, 8444263 - 8444356
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 446  Q
    ||||||||||||||||||||| || |   || || | |||||| |||||| || |||||||||||||| | |||||||||||||||||| |||||||    
T  8444263 aagaaactaaaatggattaaaataat---agcctagagatttcagcacaaagagtgccaaaaccccagttaaaagagtcaattacaagagtgccaaa 8444356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 104 - 277
Target Start/End: Original strand, 14942411 - 14942585
Alignment:
Q  104 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 203  Q
    ||||||||| |||| |||| ||| | ||||||| |||||| | | ||||| | |||||||||||  ||||||||||||  || |||||  |||||  |||    
T  14942411 gagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaaacgacttatgaagatgcaat 14942510  T
Q  204 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg-taaagatatttttcataagctcaatcc 277  Q
    ||| ||||  || ||||||| | |||| |||||| ||||||||||||  |||| |||||| ||||||||| ||||    
T  14942511 ttttgttagcaagaacttataaattaacataaaaccttatttatttgcaaaagctattttccataagctccatcc 14942585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 171 - 268
Target Start/End: Complemental strand, 25465878 - 25465781
Alignment:
Q  171 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 268  Q
    |||||||||||  ||||||||  |||||| |||||| |||| | ||||||||||| |||| ||||||||||||||||||| | ||| ||||||||||||    
T  25465878 agtttatgaaaa-acaacttatgaagatacaatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataa 25465781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 32131425 - 32131598
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| | || ||| ||||||||| ||||||||   ||||||  ||| |||| ||  |||||||||||   ||||| ||  |||||| |    
T  32131425 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaataaacaacctatgaagataca 32131524  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||  || | | ||||||||| |||| |||||||||||| |||||| | ||  ||||||||||||||||||    
T  32131525 attttcaatagtgagaacttatgaattaacataaaagcttatctatttgcataaactatttttcataagctcaa 32131598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 274
Target Start/End: Complemental strand, 41145473 - 41145324
Alignment:
Q  128 aaataaatacgcttttattttttatt---cacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatg 224  Q
    ||||||||| |||||||||| |||||   || ||| |||||||  ||||||||||||  |||||||  |||||||  |||||| ||| | | ||||||||    
T  41145473 aaataaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaacaacttt-aaagatacgattttcattagtgagaacttatg 41145375  T
Q  225 agttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    | |||||||| || |||||||||||| | ||  ||||||||||||||||||    
T  41145374 aattaatatataaacttatttatttgcataaactatttttcataagctcaa 41145324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 14725029 - 14724918
Alignment:
Q  139 cttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaag 238  Q
    ||||||| | ||||| | ||| |||||||  || |||||||||  ||||||||   || || ||||||||||||||| ||||||||| |||| ||||||     
T  14725029 cttttatatattatttataagattgttaatgtaatttatgaaaaaacaacttatgtaggtataattttcgttaataagaacttatgaattaagataaaaa 14724930  T
Q  239 cttatttatttg 250  Q
    ||||||||||||    
T  14724929 cttatttatttg 14724918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 274
Target Start/End: Complemental strand, 16972455 - 16972284
Alignment:
Q  105 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgt-taaaatagtttatgaaagtacaacttagaaagataaaat 203  Q
    ||||||||||||| || |  || ||||||||| |||| ||| | ||||||| ||| |||| |||  ||||| ||||||  ||| ||||  |||||| |||    
T  16972455 agcttatgcaaaacaatttttgcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaat 16972356  T
Q  204 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||||| | | ||||||||| | |||||||||| ||||||||||| | ||| ||||||  ||||||||||    
T  16972355 tttcgttagtgataacttatgaatcaatataaaagtttatttatttgcataagctattttgaataagctcaa 16972284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 25333710 - 25333655
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttattt 249  Q
    |||||| ||||||||||| | ||||||||||| |||| ||||||||||||||||||    
T  25333710 aagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttattt 25333655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 28879069 - 28879210
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaa--acttatga 225  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||     ||| |||| | |||  ||||||||    
T  28879069 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaagat-----ttttgttagtgaaagaacttatga 28879163  T
Q  226 gttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
     |||| ||||||||||||||||||| | ||| |||||||||||||||    
T  28879164 attaacataaaagcttatttatttgcataagctatttttcataagct 28879210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 2563402 - 2563519
Alignment:
Q  161 ttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatat 259  Q
    |||||||| ||||||||||||  |||||||   || ||| ||||||  ||| ||| | ||||||| |||| |||||||| || ||||||||| ||| | |    
T  2563402 ttgttaaagtagtttatgaaaaaacaacttttgaatatacaatttttattagtaagatcttatgaattaacataaaagcataattatttgtataagctct 2563501  T
Q  260 ttttcataagctcaatcc 277  Q
    ||||||||||||||||||    
T  2563502 ttttcataagctcaatcc 2563519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 24087256 - 24087321
Alignment:
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcat 266  Q
    |||||||||||| ||||||||| | |||| ||||||||||||||||||| | ||| ||||||||||    
T  24087256 attttcgttaatgaaaacttataaattaaaataaaagcttatttatttgcataagctatttttcat 24087321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 274
Target Start/End: Complemental strand, 10298978 - 10298855
Alignment:
Q  151 attcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    ||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| |||||| | ||||||||| |||| |||||||| ||| ||||||    
T  10298978 attcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgagaacttatgaattaacataaaagc-tatctatttg 10298880  T
Q  251 ta-aagatatttttcataagctcaa 274  Q
     | ||| |||| |||||||||||||    
T  10298879 cataagctattattcataagctcaa 10298855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 24581449 - 24581536
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaag 437  Q
    ||||| |||||||| |||| |||| |||||| |||   ||||| | | ||||| || ||||||||||||||||||| |||||||||||    
T  24581449 aagaagctaaaatgaattatattattgaaagtctgaatatttcagtataaggagtgtcaaaaccccagctgaaagaatcaattacaag 24581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 26047057 - 26046978
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 181  Q
    ||||||||||| |||| |||| ||| ||| || || |||||||||| ||||| ||||||||||| |  ||||||||||||    
T  26047057 ttgagcttatgtaaaacaacttatgcaaaaaagtaagcttttatttattattaacaagcttgttgaggtagtttatgaaa 26046978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 277
Target Start/End: Original strand, 30974043 - 30974150
Alignment:
Q  171 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 269  Q
    |||||||||||  ||||||||  ||  || ||||||||||| ||| | ||||||| |||  ||||||||||||||||||| | ||| | |||||||||||    
T  30974043 agtttatgaaaaaacaacttatgaatttacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttcataag 30974142  T
Q  270 ctcaatcc 277  Q
    | ||||||    
T  30974143 cacaatcc 30974150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 277
Target Start/End: Original strand, 2669659 - 2669809
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| ||| | || | ||||| | ||| |||||||  ||||||||||||  ||||||||  || ||| | ||||| ||| ||  | ||||||| |    
T  2669659 aaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacatttttcattagtaggatcttatgaat 2669758  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||| ||||||||||||||||||  | ||| | |||||||||||||||||||    
T  2669759 taacataaaagcttatttattttcataagctctttttcataagctcaatcc 2669809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 9131137 - 9131059
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    |||||| ||||||||||| |   ||||||||| |||| ||||||| ||||||||||| | ||| |||||||||||||||    
T  9131137 aagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagctatttttcataagct 9131059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 10213795 - 10213853
Alignment:
Q  217 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||| |||| ||| ||||||||||||||| | ||| ||||||||||||||||||    
T  10213795 aacttatgaattaacatacaagcttatttatttgcataagctatttttcataagctcaa 10213853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 11988354 - 11988308
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 148  Q
    ||||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  11988354 ttgagcttatgaaaaataacttatgtaaataaatatgcttttatttt 11988308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 29713334 - 29713289
Alignment:
Q  103 tgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 148  Q
    |||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  29713334 tgagcttatgaaaaataacttatgtaaataaataagcttttatttt 29713289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 35055499 - 35055579
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||| | | | ||||||| |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  35055499 aagatacaattttcgttagtgagagcttatgaattaa-ataaaagcttatttatttacataagctatttttcataagctcaa 35055579  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 36907686 - 36907597
Alignment:
Q  161 ttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    |||||||  ||||||||||||  |||||||   || ||| ||||||||||| ||| | ||||||| |||  |||||||||||||||||||    
T  36907686 ttgttaaggtagtttatgaaaaaacaacttgtgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttg 36907597  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 37410922 - 37410841
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||| || |||||||||||  | ||| ||||||||||||||||||    
T  37410922 aagatacaattttcgttagtaagaacttataaattaaaatataaacttatttatttacataagctatttttcataagctcaa 37410841  T

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Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 42102183 - 42102264
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||||| | |  |||| | |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  42102183 aagatacaattttcgttaatgagaggttataaattaaaataaaagcttatttatttacataagctatttttcataagctcaa 42102264  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 2669811 - 2669763
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 145  Q
    |||||||||||||||| |||| | || ||||||||||||| ||||||||    
T  2669811 ttggattgagcttatgaaaaagagcttatgaaaataaataagcttttat 2669763  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 8752906 - 8752965
Alignment:
Q  217 aacttatgagttaatataaaagcttatttattt--gtaaagatatttttcataagctcaa 274  Q
    ||||||||| |||| ||||||||||||||||||   | ||| ||||||||||||||||||    
T  8752906 aacttatgaattaacataaaagcttatttatttacattaagttatttttcataagctcaa 8752965  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 9782223 - 9782303
Alignment:
Q  157 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 237  Q
    |||||||||||| |||||||| |||  ||||||||  || ||| ||||||||||| ||| | ||||||| |||| ||||||    
T  9782223 aagcttgttaaagtagtttattaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattaacataaaa 9782303  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 277
Target Start/End: Original strand, 19925546 - 19925718
Alignment:
Q  106 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattt 205  Q
    |||||| ||||| | || ||| ||||||||| ||||||| || ||||| | ||| |||||||  || |||| ||||  |||| |||  |||||| |||||    
T  19925546 gcttatacaaaacagcttatgcaaataaataagcttttaattattatttataagtttgttaaggtattttacgaaaaaacaatttatgaagatacaattt 19925645  T
Q  206 tcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    |||||| | | | ||||  | |||| |||||  |||||||||||  | ||| |||||||||||||||||||||    
T  19925646 tcgttagtgagagcttacaaattaaaataaatacttatttatttacataagctatttttcataagctcaatcc 19925718  T

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Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 102 - 277
Target Start/End: Original strand, 21788442 - 21788618
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||| |||||||||| | || ||| ||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||  ||||||||  ||||||||    
T  21788442 ttgagtttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaa 21788541  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    |||||||||| | | | ||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  21788542 attttcgttagtgagagcttatgaattaatataaaagcttatttatttgcataagttatttttcataagctcaatcc 21788618  T

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Target: chr2; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 2702258 - 2702356
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 448  Q
    ||||||||||||||||||||| ||||||||| ||   |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2702258 aagaaactaaaatggattaaaatactgaaagcctcaagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 2702356  T

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Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 12410887 - 12410790
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||  ||||| || || ||||||||||||| |||||||||||||||||| ||||||||    
T  12410887 aagaaactaaaatggattaaaatactgaaagcctggagatttcatcacaaagagtgacaaaaccccagctaaaagagtcaattacaagagtgccaaaa 12410790  T

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Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 12422947 - 12422850
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||  ||||| || || ||||||||||||| |||||||||||||||||| ||||||||    
T  12422947 aagaaactaaaatggattaaaatactgaaagcctggagatttcatcacaaagagtgacaaaaccccagctaaaagagtcaattacaagagtgccaaaa 12422850  T

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Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 350 - 432
Target Start/End: Complemental strand, 27271740 - 27271658
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaatt 432  Q
    ||||||||||||| ||||||||||||||||| |||| |||||| ||||||||| || |||||| |||||||||||||||||||    
T  27271740 aagaaactaaaatagattaaattactgaaagcctggagatttcagcacaaggagtgtcaaaactccagctgaaagagtcaatt 27271658  T

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Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 6764520 - 6764423
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||||| |||||||||   || |||||| ||| ||||| || ||||||||||||| |||||||||||||||||| ||||||||    
T  6764520 aagaaactaaaatggattaaaatactgaaagctcggagatttcagcataaggagtgtcaaaaccccagctaaaagagtcaattacaagagtgccaaaa 6764423  T

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Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 37648065 - 37647968
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    |||||| |||||||||||||| |||||||||  ||| |||||| ||||||||| |||||||||| ||||| |||||||||||||||||| || |||||    
T  37648065 aagaaattaaaatggattaaaatactgaaagtttggagatttcagcacaaggagtgccaaaacctcagctaaaagagtcaattacaagagtgtcaaaa 37647968  T

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Target: chr2; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 8832510 - 8832612
Alignment:
Q  170 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 268  Q
    ||||||||||||  |||  ||||||||||| ||||||||||| | ||||||||||| |||| ||||||||||||||||||| | ||| ||||||||||||    
T  8832510 tagtttatgaaaacacaggttagaaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataa 8832609  T
Q  269 gct 271  Q
    |||    
T  8832610 gct 8832612  T

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Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 119 - 274
Target Start/End: Original strand, 4004821 - 4004977
Alignment:
Q  119 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 218  Q
    |||| ||| |||||||||  ||||||| |  |||||| |||||| ||||| |||||||||||| |||||||||  ||| || ||||||||||| | | ||    
T  4004821 aacttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgagaa 4004920  T
Q  219 cttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||| ||| ||||||||||| ||||| || | ||| |||||||||||| |||||    
T  4004921 cttatgaattactataaaagcttttttatctgcataagctatttttcataaactcaa 4004977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 102 - 271
Target Start/End: Original strand, 4026911 - 4027080
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||||||||||||||   || ||| ||||||||| |||||||| | |||| || |||||||| ||  ||||||||||||  ||| ||||  |||||| |    
T  4026911 ttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataca 4027009  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||||| |||| | | ||||||||| |||| |||| |||||||||||||| | ||| |||||||||||||||    
T  4027010 atttttgttagtgagaacttatgaattaacataatagcttatttatttgcataagctatttttcataagct 4027080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 34913496 - 34913402
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 191  Q
    ||||||||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| ||| ||||||| |||||||||||||  ||||||||    
T  34913496 ttggattgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaacaactta 34913402  T

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Target: chr2; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 11031898 - 11031809
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 439  Q
    ||||| |||||||| || | |||| |||||| |||| |||||| ||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  11031898 aagaagctaaaatgaatgatattattgaaagtctggagatttcagcataaggagtgccaaaaccccagctgaaagagtcaaatacaagaa 11031809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 106 - 274
Target Start/End: Original strand, 15155802 - 15155971
Alignment:
Q  106 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattt 205  Q
    ||||||| |||| |||| ||||||||||||| |||||||| | ||||| | || ||||||||   |||||||||||  |||| |||  ||| || |||||    
T  15155802 gcttatgtaaaacaacttatgaaaataaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaaaaacaatttaagaaggtacaattt 15155901  T
Q  206 tcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
     ||||||| | ||||||||| |||| |||||| |||||||||||  | ||| | ||||||||||||||||    
T  15155902 ccgttaatgagaacttatgaattaagataaaaacttatttattttcataagctctttttcataagctcaa 15155971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 33321413 - 33321240
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| ||||  || ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |    
T  33321413 ttgagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataca 33321314  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||| |||| | | | ||| ||| |||| ||||| | ||||||||||| | ||| |||||| |||||||||||    
T  33321313 atttttgttagtgagagcttgtgaattaacataaaggtttatttatttgcataagctattttacataagctcaa 33321240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 42064883 - 42064984
Alignment:
Q  149 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 248  Q
    ||||||| |||||||||||  |||||||| |||  | ||||||  ||||||  |||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  42064883 ttattcataagcttgttaaggtagtttataaaaaaataacttatgaagatatcattttcgttagtaagaacttatgaattaatataaaagcttatttatt 42064982  T
Q  249 tg 250  Q
    ||    
T  42064983 tg 42064984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 34394492 - 34394572
Alignment:
Q  357 taaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaag 437  Q
    ||||||| |||| ||||||||||| ||   ||||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  34394492 taaaatgaattatattactgaaagcctaaagatttcaacacaaggagtgccaaaaccccagctgaaagagtcaattacaag 34394572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 274
Target Start/End: Complemental strand, 36501578 - 36501443
Alignment:
Q  140 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 239  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||||||||| ||||| | | |||| |||| |||| ||||||||    
T  36501578 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcatgaattaacataaaagc 36501479  T
Q  240 ttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||| | ||| ||||||||| ||||||||    
T  36501478 ttatttatttgcataagctatttttcacaagctcaa 36501443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 38216096 - 38216174
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    |||||| ||||||||||| | | |||||||||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  38216096 aagatacaattttcgttagtgagaacttatgagttaacataaaagcttatttatttgcataagctatttttcgtaagct 38216174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 277
Target Start/End: Original strand, 11776997 - 11777145
Alignment:
Q  130 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtta 229  Q
    ||||||| |||||||| | ||||| | |||||||||||  ||||||||||||  ||| ||||  |||||| | |||| |||| | | ||||||| |  ||    
T  11776997 ataaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaagatacactttttgttagtgagaacttataaacta 11777096  T
Q  230 atataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    | |||||| |||||||||||| | ||| ||||||| |||||||||||||    
T  11777097 acataaaaccttatttatttgcagaagctatttttaataagctcaatcc 11777145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 274
Target Start/End: Complemental strand, 25836787 - 25836641
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||  ||||  |||| | |||| |||||| | | |||||||||      
T  25836787 aaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacggcttatgaagacacaattatcgttagtgagaacttatga-a 25836689  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||| ||||||||||||||||||| | ||| |||| |||||||||||||    
T  25836688 taacataaaagcttatttatttgcataaggtattcttcataagctcaa 25836641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 250
Target Start/End: Original strand, 29774733 - 29774878
Alignment:
Q  105 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 204  Q
    |||||||||| || |||| ||| |||||||||  |||||||   |||||||  || |||||||  ||||||||||||  ||  ||||  || ||| ||||    
T  29774733 agcttatgcataacaacttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaatt 29774832  T
Q  205 ttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    ||||||| | | ||||||||| ||||  ||||||||||||||||||    
T  29774833 ttcgttagtgagaacttatgaattaacgtaaaagcttatttatttg 29774878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 37409628 - 37409801
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||| ||||||||| |||| ||| ||||||||| |||||||  | |||||| | || |||| ||  ||||||||||||  |||| |||  || ||| |    
T  37409628 ttgagcgtatgcaaaacaacttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagtttatgaaaaaacaatttatgaaaataca 37409727  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||| |||| | |||||||   | |||| |||||| |||| ||| ||||| ||| ||||||||||||||||||    
T  37409728 atttttgttattgaaaacttcgaaattaacataaaatcttagttacttgtataagctatttttcataagctcaa 37409801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 21788620 - 21788572
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 145  Q
    |||||||||||||||| ||||||||| ||| ||||||||| ||||||||    
T  21788620 ttggattgagcttatgaaaaataacttatgcaaataaataagcttttat 21788572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 35731203 - 35731271
Alignment:
Q  184 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 252  Q
    |||||||| ||| ||||||||||| ||||| ||| ||||||| ||||  ||||| ||||||||||||||    
T  35731203 acaacttataaaaataaaattttcattaatgaaatcttatgaattaacgtaaaatcttatttatttgta 35731271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 275
Target Start/End: Complemental strand, 38471890 - 38471718
Alignment:
Q  104 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 203  Q
    |||||||||||||| | || ||| ||||||||| |||||||| | ||||  | |||||| || |  ||||||||||||  |||  |||  ||| || |||    
T  38471890 gagcttatgcaaaacagcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatgaaggtacaat 38471791  T
Q  204 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaat 275  Q
    |||||||| | | ||||||||| |||| |||| |  ||||||||||||| ||| | ||||||||||| |||||    
T  38471790 tttcgttagtgagaacttatgaattaagataacaatttatttatttgtataagttctttttcataagttcaat 38471718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 755843 - 755764
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 181  Q
    |||||||||||||||| |||| | | |||||| || |||||||| | ||||||| ||||||||||   ||||||||||||    
T  755843 ttgagcttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagcttgttacggtagtttatgaaa 755764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 274
Target Start/End: Complemental strand, 30382300 - 30382197
Alignment:
Q  172 gtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagc 270  Q
    ||||| ||||| |||| |||| |||||| ||||||||||| | ||| ||||| | |||| | ||||||||||||||||  | ||  ||||||||||||||    
T  30382300 gtttacgaaagaacaatttaggaagatacaattttcgttagtgaaagcttataaattaaaacaaaagcttatttatttacataatctatttttcataagc 30382201  T
Q  271 tcaa 274  Q
    ||||    
T  30382200 tcaa 30382197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 7480918 - 7480852
Alignment:
Q  184 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    ||||||||| |||||| ||||||| ||| | | ||||||||| |||| |||||| ||||||||||||    
T  7480918 acaacttaggaagatacaattttcattagtcagaacttatgaattaacataaaaacttatttatttg 7480852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 12950134 - 12950040
Alignment:
Q  184 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||||||||  || ||| ||||||||||| ||| | ||||||| |||| ||||||||||| ||||||| | | | | |||||||||||||||||||    
T  12950134 acaacttatgaatatagaattttcgttagtaagatcttatgaattaacataaaagcttaattatttgcatatgctctttttcataagctcaatcc 12950040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 22898359 - 22898285
Alignment:
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||| | |||||||||   |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  22898359 aattttcgttagtcaaaacttatagattaaaataaaagcttatttatttacataagctatttttcataagctcaa 22898285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 23956274 - 23956217
Alignment:
Q  193 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    ||||||| ||||||||||||| | ||||||| | |||| |||||| ||||||||||||    
T  23956274 aaagatacaattttcgttaatgagaacttataaattaacataaaaacttatttatttg 23956217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 16108164 - 16108076
Alignment:
Q  161 ttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttattt 249  Q
    |||||||  ||||||||||||  ||||||||  || ||| |||||| |||||| ||| ||||||| |||| ||||| ||||| ||||||    
T  16108164 ttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgttaattaaatcttatgaattaacataaacgcttaattattt 16108076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 9e-41; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 97 - 277
Target Start/End: Complemental strand, 44613579 - 44613398
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 196  Q
    ||||||||||||||||||||| | || ||| ||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||  ||||||||  | |    
T  44613579 ttggattgagcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacg 44613480  T
Q  197 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||| ||||||  ||||| | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  44613479 atacaatttttattaattagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 44613398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 28782015 - 28782112
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  28782015 aagaaactaaaatggattaaaatactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 28782112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 350 - 448
Target Start/End: Complemental strand, 1032320 - 1032222
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 448  Q
    ||||||||||| |||| |||||||||||||| |||| |||||| ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  1032320 aagaaactaaattggactaaattactgaaagcctggagatttcagcacagggaatgctaaaaccccagctgaaagagtcaattacaagaatgccaaaac 1032222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 9949030 - 9948933
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||||| ||||||||| |||  |||||| ||||||||| | |||||||||||||| |||||||||||||||||| ||||||||    
T  9949030 aagaaactaaaatggattaaaatactgaaagcctgaagatttcagcacaaggagtaccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 9948933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 11621464 - 11621380
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattac 434  Q
    ||||| ||||||||||||| ||||||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  11621464 aagaagctaaaatggattatattactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaattac 11621380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 9942602 - 9942699
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| || ||||||| || || ||| |||||||||||||| ||||||||    
T  9942602 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgtcaaaacctcaactaaaatagtcaattacaagagtgccaaaa 9942699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 102 - 246
Target Start/End: Complemental strand, 48021748 - 48021605
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||| ||||| || | ||| ||||||||| ||| |||||| ||||||| |||||||||||| ||||||||||||  | |||| |  |||||| |    
T  48021748 ttgagcttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttatgaaa-aataactaatgaagataca 48021650  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttattta 246  Q
    |||||| ||| | ||||||||||| |||||||||||  |||||||    
T  48021649 attttcattagtgaaaacttatgaattaatataaaaaattattta 48021605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 274
Target Start/End: Original strand, 39279461 - 39279588
Alignment:
Q  149 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaa-taaaaacttatgagttaatataaaagcttatttat 247  Q
    ||||||| |||||||||||  | ||||||||||   || ||||| |||||| |||||||||||| | | ||| ||||| |||| ||||||||||||||||    
T  39279461 ttattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattttcgttaattgagaacctatgaattaacataaaagcttatttat 39279560  T
Q  248 ttgta-aagatatttttcataagctcaa 274  Q
    ||||| ||| ||||||||||||||||||    
T  39279561 ttgtataagctatttttcataagctcaa 39279588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 28759946 - 28759790
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 196  Q
    |||||||||| ||||| |||| |||| ||||||| ||| | | |||||||| ||||||| |||||||||||  |||||||| |||  | |||||| ||||    
T  28759946 ttggattgagtttatgtaaaacaacttatgaaaaaaaaaaagtttttatttattattcataagcttgttaaggtagtttataaaaaaataacttataaag 28759847  T
Q  197 ataa---aattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    ||||   ||| || |||| ||| ||||||||| || |||||||||||||||| ||||    
T  28759846 ataatataatatttgttagtaagaacttatgaattgatataaaagcttatttgtttg 28759790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 29390651 - 29390479
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||| ||||| |||| |||| ||| |||||||||  |||| || | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |    
T  29390651 ttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatgaaa-aacaacttatgaagataca 29390553  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||   | || |||||| |||| ||||||||||||||||||| | ||  ||||||||||||||||||    
T  29390552 attttcgttagctagaatttatgaattaacataaaagcttatttatttgcataaactatttttcataagctcaa 29390479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 430
Target Start/End: Original strand, 40871302 - 40871382
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaa 430  Q
    ||||| ||||||||||||| |||| | |||| |||| |||||| ||||||||| |||||||| ||||||||||||||||||    
T  40871302 aagaagctaaaatggattatattattaaaagcctggagatttcagcacaaggagtgccaaaatcccagctgaaagagtcaa 40871382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 274
Target Start/End: Original strand, 22032749 - 22032920
Alignment:
Q  104 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 203  Q
    ||||||||| |||| |||| ||| ||||||||| | |||||| | ||||| | |||| ||||||  ||||||||||||  |||| |||  ||| || |||    
T  22032749 gagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaat 22032848  T
Q  204 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||||| | | ||||||| | |||| |||||| |||||||||||| | ||| | ||||||||||||||||    
T  22032849 tttcgttagtgagaacttataaattaagataaaaacttatttatttgcataagctttttttcataagctcaa 22032920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 274
Target Start/End: Original strand, 29378656 - 29378803
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||||| |  || |||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| ||| ||||||||| |    
T  29378656 aaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaacttatgaat 29378755  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||  |||||||||||||||||| | ||| |||||||||||| |||||    
T  29378756 taacgtaaaagcttatttatttgcataagctatttttcataaactcaa 29378803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 47654460 - 47654339
Alignment:
Q  157 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aag 255  Q
    |||||||||||  ||||||||||||  |||  |||  ||| || ||||||||||| | | ||||||||| |||| |||||| |||||||||||| | |||    
T  47654460 aagcttgttaatgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataag 47654361  T
Q  256 atatttttcataagctcaatcc 277  Q
    || |||||||||||||||||||    
T  47654360 atctttttcataagctcaatcc 47654339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 139 - 277
Target Start/End: Complemental strand, 37465951 - 37465811
Alignment:
Q  139 cttttattttttattcacaagcttgttaaaatagtttat-gaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 237  Q
    ||||||||| ||||||| || |||||||| ||||||||| ||||  ||||||||  |||||| ||| || |||    | ||||||||| |||||||||||    
T  37465951 cttttatttattattcataaacttgttaagatagtttatagaaaaaacaacttattaagatacaatatttgttggcgagaacttatgaattaatataaaa 37465852  T
Q  238 gcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||||||||||||| | ||| || ||||||||||||| ||||    
T  37465851 gcttatttatttgcataagctaattttcataagctcgatcc 37465811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 47648549 - 47648670
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    |||||||||  ||||||||| |||||||| | |||||||| |||||||||||||  ||||  ||  ||||| || ||||||||| | ||||||||||| |    
T  47648549 aaataaataaacttttatttattattcacgaacttgttaagatagtttatgaaaaaacaatctattaagat-aatttttcgttagtgaaaacttatgaat 47648647  T
Q  228 taatataaaagcttatttatttg 250  Q
    ||||||||||   ||||||||||    
T  47648648 taatataaaaatatatttatttg 47648670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 38372543 - 38372716
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| | || ||| ||||||||| ||| |||| | ||||||| ||| |||| ||  ||||||| ||||   || || |  |||| | |    
T  38372543 ttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcagctcaagaagaaaca 38372642  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||||||| | | ||||||||| |||| ||||||||| ||||||||| |  || ||||||||||||||||||    
T  38372643 attttcgttagtgagaacttatgaattaacataaaagctgatttatttgcattagctatttttcataagctcaa 38372716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 250
Target Start/End: Complemental strand, 14691364 - 14691252
Alignment:
Q  138 gcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 237  Q
    |||||||| | ||||||| |||||||| ||  || |||||||||  |||| |||  |||||| ||||||||||| | | ||||||||| |||| ||||||    
T  14691364 gcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaacttatgaattaacataaaa 14691265  T
Q  238 gcttatttatttg 250  Q
    | |||||||||||    
T  14691264 ggttatttatttg 14691252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 271
Target Start/End: Original strand, 22575573 - 22575741
Alignment:
Q  104 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 203  Q
    ||||||||| |||| | || ||| ||||||||||| |||||| | ||||| | ||| ||||||| ||| |||||||||  |||  |||  |||||| |||    
T  22575573 gagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaaaaacagtttatgaagatacaat 22575672  T
Q  204 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    |||||||| ||| | ||||| | |||| |||||| ||||||||| |  | ||| |||||||||||||||    
T  22575673 tttcgttagtaagagcttataaattaaaataaaaacttatttatctacataagctatttttcataagct 22575741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 33204934 - 33204989
Alignment:
Q  217 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||||||||| |||| ||||||||||||||||||| | |||||||||||||||||||    
T  33204934 aacttatgaattaacataaaagcttatttatttgcataagatatttttcataagct 33204989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 16932939 - 16932858
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16932939 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16932858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 16938322 - 16938241
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16938322 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16938241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 16958892 - 16958973
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16958892 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16958973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 33288084 - 33288003
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| | ||||||||| | ||||||||||| |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  33288084 aagatacagttttcgttagtgaaaacttatgaattaacataaaaacttatttatttggataagctagttttcataagctcaa 33288003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 274
Target Start/End: Original strand, 34922926 - 34923091
Alignment:
Q  112 gcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagta--caacttagaaagataaaattttcgt 209  Q
    |||||| |||| ||| ||||||||| |||||||| | ||||||| ||| |||| ||  |||||||| |||  |  || |||   |||||| | |||||||    
T  34922926 gcaaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaaaaacagcttgtgaagatacacttttcgt 34923025  T
Q  210 taataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    || | | |||||||||  ||| ||||||||||||||||||| | ||| ||||||| ||||||||||    
T  34923026 tagtgagaacttatgaactaacataaaagcttatttatttgcataagctattttttataagctcaa 34923091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 277
Target Start/End: Original strand, 35809101 - 35809251
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| || || || | ||||| | |||||||||||  ||||||||||||  ||||||||  || ||| ||||||||  | ||| |  |||||| |    
T  35809101 aaataaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaacaacttaagaatatacaattttcgccagtaagattttatgaat 35809200  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||| ||||||||||| ||||||  | ||| | |||||||||||||||||||    
T  35809201 taacataaaagcttaattatttacataagctctttttcataagctcaatcc 35809251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 8180653 - 8180544
Alignment:
Q  141 tttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagct 240  Q
    ||||||| ||||| | |||||||||||  |||||||| |||    |||||| ||| ||| ||| ||  ||| | ||||||||||| |||||||||||| |    
T  8180653 tttatttattatttataagcttgttaaggtagtttataaaaaattaacttataaaaatataatatttattagtgaaaacttatgaattaatataaaagtt 8180554  T
Q  241 tatttatttg 250  Q
    ||||||||||    
T  8180553 tatttatttg 8180544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 275
Target Start/End: Original strand, 43391717 - 43391880
Alignment:
Q  113 caaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaa 212  Q
    ||||| |||| ||| |||||||||  ||| | ||| ||||||| ||| |||||||  ||||||||||||  | || |||  |||||| |||||| |||      
T  43391717 caaaacaacttatgtaaataaataaacttatgtttattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagatataatttttgtttg 43391816  T
Q  213 taaaaacttatgagttaatataaaagcttatttattt--gtaaagatatttttcataagctcaat 275  Q
    | ||||||||| | | ||||||||| |||||||||||  |||||  |||||||||||| ||||||    
T  43391817 tgaaaacttataaataaatataaaaacttatttatttacgtaaa-ctatttttcataaactcaat 43391880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 43818864 - 43818803
Alignment:
Q  217 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||||||||| |||| |||||| |||||||||||| | ||| | |||||||||||||||||||    
T  43818864 aacttatgaattaagataaaaacttatttatttgcataagctctttttcataagctcaatcc 43818803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 274
Target Start/End: Original strand, 20888584 - 20888732
Alignment:
Q  128 aaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgag 226  Q
    ||||||||| |||||| || | ||||||| |||||||  ||  ||||||||||||  |||| |||  |||||| ||||||| |   | ||||||||| |     
T  20888584 aaataaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaattttcttccgtgaaaacttataaa 20888683  T
Q  227 ttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||| |||||| |||| ||||||| | ||| ||||||||||||||||||    
T  20888684 ttaacataaaaacttacttatttgcataagttatttttcataagctcaa 20888732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 22515608 - 22515564
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttatt 146  Q
    ||||||||||||||||||  | ||||||||||||| |||||||||    
T  22515608 ttgagcttatgcaaaatatattatgaaaataaataagcttttatt 22515564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 44613396 - 44613444
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 145  Q
    |||||||||||||||| |||||| || ||| ||||||||| ||||||||    
T  44613396 ttggattgagcttatgaaaaatagcttatgcaaataaataagcttttat 44613444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 97 - 277
Target Start/End: Original strand, 41228883 - 41229064
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 196  Q
    ||||||||||||||||||||| | || ||| |  |||||| |||||||||| ||||||| |||||||||||  ||||||||||||  |||||| |  |||    
T  41228883 ttggattgagcttatgcaaaacagcttatgcaggtaaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaag 41228982  T
Q  197 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||| ||||||| ||| | | ||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||||||||    
T  41228983 atacaattttcattagttagaacttatgaattaatataaaagctaatttatttgcataagctatttttcataagctcaatcc 41229064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 43499397 - 43499300
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||||| |||||||||  ||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  43499397 aagaaactaaaatggattaaaatactgaaagcttggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 43499300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 46704375 - 46704201
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 196  Q
    |||||||||||||||| |||| |||| ||| |||||| || |||||||||| |||||||  ||||||||||  ||||||||||||  ||| ||||  |||    
T  46704375 ttggattgagcttatgtaaaacaacttatgcaaataa-taagcttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaag 46704277  T
Q  197 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||||||||||| ||| | | ||||||||| |||||||||||  ||| ||||||| | ||| |||||||||||||||    
T  46704276 ataaaattttcattagtgagaacttatgaattaatataaaaagttacttatttgcataagttatttttcataagct 46704201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 39059723 - 39059821
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 448  Q
    ||||||||||||||||||||||||||||||| |||  || ||| ||||||| | ||||||||||| |||||||||||| ||||||||||||| ||||||    
T  39059723 aagaaactaaaatggattaaattactgaaagtctgaagaattcagcacaagcagtgccaaaacccaagctgaaagagttaattacaagaatgtcaaaac 39059821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 138 - 274
Target Start/End: Complemental strand, 18630960 - 18630823
Alignment:
Q  138 gcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 237  Q
    |||||||||| |||| ||  ||||||||||  ||||||||||||  ||| ||||  |||||||| ||||||||| | | ||||||||| |||||||||||    
T  18630960 gcttttatttattatccatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgagaacttatgaattaatataaaa 18630861  T
Q  238 gcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||||| | ||| ||||||||||||||||||    
T  18630860 gcttatttatttgcataagctatttttcataagctcaa 18630823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 353 - 430
Target Start/End: Original strand, 37870649 - 37870726
Alignment:
Q  353 aaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaa 430  Q
    |||||||||||||||| |||||| |||| |||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  37870649 aaactaaaatggattatattactcaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 37870726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 29877624 - 29877792
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| || | ||| ||||||||| |||||||| | ||||||| ||||||| |||  ||||||||||||   || ||||  |||||| |    
T  29877624 ttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagcttatgaagataca 29877723  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 269  Q
    ||||| |||| | | ||||||||| |||| |||||||||||| |||||| | ||| |||||||||||||    
T  29877724 atttttgttagtgagaacttatgaattaacataaaagcttatatatttgcataagctatttttcataag 29877792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 23297423 - 23297593
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||||| || ||| ||||||||| |||||||| | ||||||| ||| |||| ||  |||||||||||   ||| ||||  |||||| |    
T  23297423 ttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatgaa---acagcttatgaagataca 23297519  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||| ||||   | ||||||||| |||  ||||||||||||||||||| | ||| ||||||||||||||||||    
T  23297520 atttttgttagcgagaacttatgaattagcataaaagcttatttatttgcataagctatttttcataagctcaa 23297593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 351 - 446
Target Start/End: Original strand, 36651742 - 36651837
Alignment:
Q  351 agaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 446  Q
    |||||||||||||||||||| ||  |||||  ||| |||||| ||||||||| |||||||||||||||| ||||||||| |||||||| |||||||    
T  36651742 agaaactaaaatggattaaaatatcgaaagtttggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcagttacaagagtgccaaa 36651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 274
Target Start/End: Complemental strand, 48591499 - 48591352
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| | |||||| | ||||||| | |||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||||| | ||||||||| |    
T  48591499 aaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaacttatgaat 48591400  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||  |||||||||||||||||| | ||| ||||||||||||||||||    
T  48591399 taacgtaaaagcttatttatttgcataagctatttttcataagctcaa 48591352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 9896508 - 9896606
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 448  Q
    ||||||||||||||||| |||||| ||||||  |||  ||||  ||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||    
T  9896508 aagaaactaaaatggataaaattagtgaaagcttggaaatttaagcacaaggagtgccaaaaccccagatgaaaaagtcaattgcaagaatgccaaaac 9896606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 36298344 - 36298465
Alignment:
Q  130 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-aaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 228  Q
    ||||||| |||||||||| ||||| | ||  |||||||||||||||||| |||  |||| |||  |||||||| |||| |||||| ||||||||||| ||    
T  36298344 ataaatatgcttttatttgttatttataactttgttaaaatagtttatggaaaaaacaatttatgaagataaattttttgttaatgaaaacttatgaatt 36298443  T
Q  229 aatataaaagcttatttatttg 250  Q
    |||||||||| |||||||||||    
T  36298444 aatataaaagtttatttatttg 36298465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 102 - 249
Target Start/End: Complemental strand, 18424378 - 18424232
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| || | ||  ||||||||| |||||||| | ||||||| || ||||| ||  ||||||||||||  |||| |||  |||||| |    
T  18424378 ttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatgaaaa-acaatttatgaagataca 18424280  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 249  Q
    ||||| |||| | ||||||||||| |||| ||||||||||||||||||    
T  18424279 atttttgttattgaaaacttatgaattaacataaaagcttatttattt 18424232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 213053 - 212960
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 191  Q
    ||||||||||||||||||||| |||| ||| ||||||||| | |||||||| ||||||| |||||||||||  ||||||||||||  ||||||||    
T  213053 ttggattgagcttatgcaaaacaacttatgcaaataaataag-ttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactta 212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 274
Target Start/End: Complemental strand, 2548122 - 2547975
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| | |||||||| |||||||  ||| | ||||  ||||||||||||  |||| |||  ||||||||||||||| |||| | ||||||| | |    
T  2548122 aaataaataagtttttatttgttattcatgagcctattaagttagtttatgaaaaaacaatttatgaagataaaattttcgctaatgagaacttataaat 2548023  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||||||| |||||||||||| | ||| | ||| ||||||||||||    
T  2548022 taatataaaaacttatttatttgcataagctctttctcataagctcaa 2547975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 274
Target Start/End: Original strand, 17222852 - 17222987
Alignment:
Q  140 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 239  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  |||  |||  |||||| ||||||||||| | | ||||||||| |||| |||||| |    
T  17222852 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagttagaacttatgaattaacataaaaac 17222951  T
Q  240 ttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||| | ||| ||||||||||||||||||    
T  17222952 ttatttatttgaataagctatttttcataagctcaa 17222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 896981 - 897103
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    |||||||||  ||||||| | ||||||| |||||||| ||  ||||||||||||  |||| |||   |||||  |||||||||| | ||||||||| | |    
T  896981 aaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaacttataaat 897080  T
Q  228 taatataaaagcttatttatttg 250  Q
    |||||||||||||||||||||||    
T  897081 taatataaaagcttatttatttg 897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 353 - 447
Target Start/End: Complemental strand, 7743669 - 7743575
Alignment:
Q  353 aaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||  ||||||||  ||| |||||| ||||||||| |||||||||   |||| |||||||||||||||||| || |||||    
T  7743669 aaactaaaatggattaaaaaactgaaagcatggagatttcagcacaaggagtgccaaaacttaagctaaaagagtcaattacaagagtgtcaaaa 7743575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 271
Target Start/End: Complemental strand, 42611966 - 42611799
Alignment:
Q  105 agcttatgcaaaataactaatgaaaataaatacgcttt-tattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 203  Q
    ||||||||||||| |||| ||| ||||||||| ||||| ||| | ||||||| ||||||||  |  ||||||||||||  ||||||||  |||||| | |    
T  42611966 agcttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagcttgtcgag-tagtttatgaaaaaacaacttatgaagatacagt 42611868  T
Q  204 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg--taaagatatttttcataagct 271  Q
    |||||| | | | ||||||||| |||| |||||||||||||||||||  ||||  |||||||||||||||    
T  42611867 tttcgt-agtgacaacttatgaattaacataaaagcttatttatttgcataaatctatttttcataagct 42611799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 7206687 - 7206578
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||||||||||| || | || ||| |||| |||| |||||||||| |||||||| ||| ||||||  ||||||||||||  ||||||||  ||||||||    
T  7206687 ttgagcttatgcagaacagcttatgcaaatgaataagcttttatttattattcacgagcctgttaaggtagtttatgaaaaaacaacttatgaagataaa 7206588  T
Q  202 attttcgtta 211  Q
     |||||||||    
T  7206587 gttttcgtta 7206578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 273
Target Start/End: Complemental strand, 8057194 - 8057017
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 196  Q
    |||||||||||||||| ||||||||||||| ||| ||||| | |||||||| ||||||| |||||||| ||  ||| ||| ||||  || | |||  |||    
T  8057194 ttggattgagcttatgaaaaataactaatgcaaaaaaataagtttttatttattattcataagcttgtcaaggtagcttaagaaaaaacgatttatgaag 8057095  T
Q  197 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgtaaaga-tatttttcataagctca 273  Q
    ||| ||| || |||  | | ||||||| | ||||||||||| ||||||| |||| | ||| || ||||||||||||||    
T  8057094 atacaatatttgttcgtgagaacttataaattaatataaaaacttatttgtttggatagactaattttcataagctca 8057017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 36740915 - 36741059
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | |||| || |||||||| ||| |||||||||||| ||||  | |  |||||| ||||||| ||| | | ||||||||| |    
T  36740915 aaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgagaacttatgaat 36741014  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
     || | ||||||||||||||||| | ||| |||||||||||||||    
T  36741015 caacacaaaagcttatttatttgcataagctatttttcataagct 36741059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 249
Target Start/End: Complemental strand, 38345922 - 38345776
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| | || ||  ||||||||| |||||||| |  |||||| ||| |||| ||| ||||||||||||  ||||||||  |||||| |    
T  38345922 ttgagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagataca 38345824  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 249  Q
    |||||  |||   | ||||||||| |||| ||||||||||||||||||    
T  38345823 atttttattagccagaacttatgaattaacataaaagcttatttattt 38345776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 447
Target Start/End: Complemental strand, 42718669 - 42718574
Alignment:
Q  353 aaactaaaatggattaaattactgaaaggctggcgatttctgca-caaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||  |||||||| |||| |||||| ||| |||||| ||| |||||||| ||| ||||||| ||||| |||| ||||||||    
T  42718669 aaactaaaatggattaaaaaactgaaagcctggagatttcagcaccaaggagtgctaaaaccccggctaaaagagttaattataagagtgccaaaa 42718574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 7148783 - 7148905
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  |||||| |||||  ||| |||| ||| ||| ||||||| ||| | | ||||||||| |    
T  7148783 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagtcagaacttatgaat 7148882  T
Q  228 taatataaaagcttatttatttg 250  Q
    ||  |||||||||||||||||||    
T  7148883 tagcataaaagcttatttatttg 7148905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 274
Target Start/End: Complemental strand, 12495744 - 12495572
Alignment:
Q  105 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaa--tagtttatgaaagtacaacttagaaagataaaa 202  Q
    |||||| |||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||||  ||||||||||||  ||| || |  |||||| ||    
T  12495744 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 12495645  T
Q  203 ttttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    | ||| ||| | | ||||||| | |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  12495644 tattcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaa 12495572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 23106753 - 23106842
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 439  Q
    ||||| |||||||  |||| |||||||||||  ||| |||||| ||| ||||| |||||||||||||  |||||||||||| ||||||||    
T  23106753 aagaagctaaaataaattatattactgaaagtatggagatttcagcataaggagtgccaaaaccccatttgaaagagtcaaatacaagaa 23106842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 274
Target Start/End: Original strand, 11298573 - 11298740
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 196  Q
    ||||||||||||||||||||| | || ||| || ||| || |||||||||| |||||||  ||||| ||||  ||||||||||| |           |||    
T  11298573 ttggattgagcttatgcaaaacagcttatgcaagtaattaagcttttatttattattcatgagcttcttaaggtagtttatgaatg-----------aag 11298661  T
Q  197 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||| ||||||||| | | |||||| || ||| |||||||| ||||||||||| | ||| ||||||||||||||||||    
T  11298662 ataaagttttcgttagtgagaacttaagaattattataaaagtttatttatttgcataagctatttttcataagctcaa 11298740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 43983457 - 43983362
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttat 223  Q
    ||||||||| || || || | ||||| | ||||||||||| ||||||||| |||  |||||||| ||| ||| ||||||||||||||||| |||||    
T  43983457 aaataaataagcattaatgtattatttataagcttgttaagatagtttataaaaaaacaacttataaacatacaattttcgttaataaaatcttat 43983362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 48721897 - 48721955
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 252  Q
    |||||| |||||| |||| | | ||||||||| ||||||||||||||||||||||||||    
T  48721897 aagatataatttttgttagtgagaacttatgaattaatataaaagcttatttatttgta 48721955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 948060 - 948136
Alignment:
Q  105 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 181  Q
    ||||||||||||||| || ||||||||||||| |||||||| | ||||||| ||  |||| ||  ||||||||||||    
T  948060 agcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttatgaaa 948136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 3564205 - 3564284
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 181  Q
    |||||||||||||||| | || |||||||||||||  ||||||| | ||||||| ||| |||| ||  ||||||||||||    
T  3564205 ttgagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaa 3564284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 8130563 - 8130634
Alignment:
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    |||||| |||| | ||||||||||| |||| |||||| |||||||||||| | ||| |||||||||||||||    
T  8130563 aatttttgttagtgaaaacttatgaattaacataaaaacttatttatttgcacaagctatttttcataagct 8130634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 43699584 - 43699505
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 181  Q
    ||||||||||| |||| |||| ||  ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||    
T  43699584 ttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaa 43699505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 46175902 - 46175953
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 148  Q
    |||||||||||||||| ||||||||| ||| ||||||||| || ||||||||    
T  46175902 ttggattgagcttatgaaaaataacttatgtaaataaataagcatttatttt 46175953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 14987602 - 14987528
Alignment:
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||| | | ||||||||| ||||||||||| ||||||||||| || ||| | |||||||||| |||||    
T  14987602 aattttcgttagtgagaacttatgaattaatataaaaacttatttatttatataagctgtttttcataaactcaa 14987528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 30956782 - 30956839
Alignment:
Q  215 aaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||||||||||| ||||| ||||| |||||||||||| | ||| |||||||||||||||    
T  30956782 aaaacttatgaattaatgtaaaaacttatttatttgcataagctatttttcataagct 30956839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 31022457 - 31022558
Alignment:
Q  174 ttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctc 272  Q
    ||||||||  ||| |||| ||||||| ||||||||| | | ||||||||||| ||||  |||| ||||||||||||| | ||| | |||||||||| |||    
T  31022457 ttatgaaaaaacagcttataaagatacaattttcgtcagtgaaaacttatgaattaaggtaaatgcttatttatttgcataagttgtttttcataatctc 31022556  T
Q  273 aa 274  Q
    ||    
T  31022557 aa 31022558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 35405738 - 35405838
Alignment:
Q  171 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 269  Q
    |||||||||||  ||| ||||  |||||| ||||||||||| ||| | || || | |||| ||||||||||||||||||| | ||| |||||||||||||    
T  35405738 agtttatgaaaaaacagcttatgaagatagaattttcgttagtaagacct-attaattaacataaaagcttatttatttgcataagctatttttcataag 35405836  T
Q  270 ct 271  Q
    ||    
T  35405837 ct 35405838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 42617231 - 42617158
Alignment:
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||||||| | ||||||||| | |||| |||||| |||||||||||  | ||| ||||||||||||||||||    
T  42617231 attttcgttagtgaaaacttataaattaaaataaaaacttatttatttacataagctatttttcataagctcaa 42617158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 47202902 - 47202983
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||| | | | ||||| | |||| ||||||||||| |||||| || ||| ||||||||||||||||||    
T  47202902 aagatacaattttcgttagtgagatcttataaattaaaataaaagcttacttatttatataagttatttttcataagctcaa 47202983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 22397338 - 22397258
Alignment:
Q  170 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    ||||||||||||  ||||||||  || ||| ||||||||||| ||| | ||||||| ||||  |||||||||| |||||||    
T  22397338 tagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattaacttaaaagcttaattatttg 22397258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 24031165 - 24031213
Alignment:
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    |||||| ||||||| ||||||||| |||||||||||| || ||||||||    
T  24031165 attttctttaataagaacttatgaattaatataaaagtttttttatttg 24031213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 34526323 - 34526267
Alignment:
Q  217 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctc 272  Q
    ||||||||| |||| ||||||||||||||||||| | ||  ||||||||||||||||    
T  34526323 aacttatgaattaacataaaagcttatttatttgcataaactatttttcataagctc 34526267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 102 - 249
Target Start/End: Complemental strand, 43415390 - 43415242
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||||||| | |||| ||||  || ||||||||| | |||||| | ||||||| ||| |||||||  ||||||| ||||  |||| |||  |||||| |    
T  43415390 ttgagcttaagtaaaacaacttctgcaaataaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaaacaatttatcaagatata 43415291  T
Q  202 attttcgttaat-aaaaacttatgagttaatataaaagcttatttattt 249  Q
    || || |||| | |||||||||||| |||| ||||||  ||||||||||    
T  43415290 atatttgttagtgaaaaacttatgaattaacataaaaatttatttattt 43415242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 46175988 - 46175904
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    |||||| |||||||| || ||| | ||||| | |||| ||||| ||||||||||||  | ||| |||||||||||||||||||||    
T  46175988 aagatacaattttcgctagtaagagcttataaattaaaataaatgcttatttatttacataagttatttttcataagctcaatcc 46175904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 422
Target Start/End: Complemental strand, 48640836 - 48640764
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaa 422  Q
    |||||||||||||||| || ||||||||| | |||  |||||| ||||||||| ||| |||| ||||| ||||    
T  48640836 aagaaactaaaatggaatatattactgaacgcctgaagatttcagcacaaggagtgctaaaaacccagttgaa 48640764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 54898895 - 54898975
Alignment:
Q  357 taaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaag 437  Q
    ||||||| | || |||||||||||  ||| |||||  | | ||||| || ||||||| |||||||||||||||||||||||    
T  54898895 taaaatgaaatatattactgaaagtttggagattttagtataaggagtgtcaaaacctcagctgaaagagtcaattacaag 54898975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 8e-32; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 97 - 277
Target Start/End: Complemental strand, 9572891 - 9572709
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaa 195  Q
    ||||||||||||||||||||| | ||  || ||||||||| |||||| |||| ||||||| ||| |||||||  ||||||||||||  |||| |||  ||    
T  9572891 ttggattgagcttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaa 9572792  T
Q  196 gataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    |||||| |||| |||| | | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  9572791 gataaagtttttgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 9572709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 19227887 - 19227976
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 439  Q
    ||||| ||||||||||||| ||||||||||| |||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  19227887 aagaagctaaaatggattatattactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaaatacaagaa 19227976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 33766456 - 33766359
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| |||||||||||||| | |||||||||||||||||| || |||||    
T  33766456 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgccaaaaccccagttaaaagagtcaattacaagagtgtcaaaa 33766359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 97 - 277
Target Start/End: Complemental strand, 46689656 - 46689475
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 196  Q
    ||||||||||||||||||||| |  | ||| ||||||| | |||||||||| |||||||  ||||||||||  || ||||| | |  ||||||||  ||     
T  46689656 ttggattgagcttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaa 46689557  T
Q  197 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||||||||||||||| | | ||||||||| ||||||||| || ||||||||||| | ||| |||||||||||||||||||||    
T  46689556 ataaaattttcgttagtgagaacttatgaattaatataatagtttatttatttgcataagttatttttcataagctcaatcc 46689475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 51534478 - 51534575
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||||| ||| ||||| |||| |||||| ||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||    
T  51534478 aagaaactaaaatggattaaaataccgaaagcctggagatttcagcacaaggagtgccaaaacccctgctaaaagagtcaattacaagagtgccaaaa 51534575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 4532087 - 4532175
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaaga 438  Q
    ||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| |||||||||||||| | ||||||||||||||||||    
T  4532087 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgccaaaaccccaggtaaaagagtcaattacaaga 4532175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 102 - 250
Target Start/End: Original strand, 46473079 - 46473227
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| | ||  || ||||||||| |||||||||| |||||||  || || ||||  |||| |||||||  ||||||||  ||||||||    
T  46473079 ttgagcttatgcaaaacagcttgtgtaaataaataagcttttatttattattcatgaggtttttaaggtagtatatgaaaaaacaacttatgaagataaa 46473178  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
     ||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  46473179 gttttcgttaataagaacttatgaattaatataaaatcttatttatttg 46473227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 13038932 - 13039105
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||| ||||||||||   || ||| ||||||||| |||||||| | |||||||  ||||||||||  ||||||||||||  ||||||||  ||||||||    
T  13038932 ttgaggttatgcaaaacggctgatgcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaa 13039031  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
     ||||||||| | | || |||||| |||||||||||| ||||||||||| | ||| ||||||||||||| ||||    
T  13039032 gttttcgttagtgagaagttatgaattaatataaaagtttatttatttgcataagctatttttcataagttcaa 13039105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 128 - 274
Target Start/End: Original strand, 26988159 - 26988306
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||| |||||| ||||||||||||| |    
T  26988159 aaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgttagtaaaaacttatgaat 26988258  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||| ||||||||| ||||||||| | ||  ||||||||||||||||||    
T  26988259 taacataaaagctaatttatttgcataaactatttttcataagctcaa 26988306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 128 - 274
Target Start/End: Original strand, 28122627 - 28122776
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaata--aaaacttatga 225  Q
    ||||||||  |||||||||| |||||||  ||||| ||||  ||||||||||||  | |||||| ||||||||||||||||||| ||  ||||||| |||    
T  28122627 aaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattttcgttagtaagaaaacttctga 28122726  T
Q  226 gttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
     |||||||||||||||||||||||  | ||  ||||||||||||||||||    
T  28122727 attaatataaaagcttatttattttcataaactatttttcataagctcaa 28122776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 105 - 250
Target Start/End: Original strand, 4068103 - 4068248
Alignment:
Q  105 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 204  Q
    ||||| ||||||||| ||  || ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  ||||||  |||    
T  4068103 agcttttgcaaaatagcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactatt 4068202  T
Q  205 ttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    ||||||| | | ||||||||| |||||||||||| |||||||||||    
T  4068203 ttcgttagtgagaacttatgaattaatataaaagtttatttatttg 4068248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 34549463 - 34549383
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaa 430  Q
    ||||| ||||||||||||| |||||| |||| |||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  34549463 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 34549383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 350 - 430
Target Start/End: Original strand, 45432374 - 45432454
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaa 430  Q
    ||||| ||||||||||||| |||||| |||| |||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  45432374 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 45432454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 357 - 433
Target Start/End: Complemental strand, 33936526 - 33936450
Alignment:
Q  357 taaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaatta 433  Q
    |||||||||||| ||||||||||| |||| |||||| | ||||||| |||||||| |||||||||||||||||||||    
T  33936526 taaaatggattatattactgaaagtctggagatttcaggacaaggagtgccaaaatcccagctgaaagagtcaatta 33936450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 128 - 277
Target Start/End: Complemental strand, 36423056 - 36422906
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||||| ||||||| ||| |||||||  |||||||||||   ||||||||  ||||||||| |||||||| | | || |||| |      
T  36423056 aaataaataagcttttatttattattcataagtttgttaaggtagtttatgaataaacaacttatgaagataaaaatttcgttagtgagaagttataaaa 36422957  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||||||||||| ||||||||||| | ||| |||| |||||||| |||||||    
T  36422956 taatataaaagtttatttatttgcataagttattcttcataagatcaatcc 36422906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 13182744 - 13182647
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    |||||| |||||| ||||||| ||||||||| ||||  ||||| | | ||||| ||||||||||||| || |||||||||||||||||||| ||||||    
T  13182744 aagaaattaaaatagattaaaatactgaaagcctggaaatttcagtataaggagtgccaaaaccccaactaaaagagtcaattacaagaattccaaaa 13182647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 129 - 273
Target Start/End: Complemental strand, 15515421 - 15515276
Alignment:
Q  129 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 228  Q
    |||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  | | ||||  |||||| ||||||||||| | | ||||||||| ||    
T  15515421 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaacttatgaatt 15515322  T
Q  229 aatataaaagcttatttattt-gtaaagatatttttcataagctca 273  Q
    || || |||||||||||||||  | ||| |||||||||||||||||    
T  15515321 aacatgaaagcttatttatttacttaagctatttttcataagctca 15515276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 150 - 274
Target Start/End: Original strand, 37712100 - 37712225
Alignment:
Q  150 tattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttattt 249  Q
    |||||| |||||||| ||  ||||||||||||  ||||||||  |||||| || |||||||| ||| ||||||||| |||| ||||||| ||||||||||    
T  37712100 tattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatacaactttcgttagtaagaacttatgaattaacataaaagtttatttattt 37712199  T
Q  250 gta-aagatatttttcataagctcaa 274  Q
    | | ||| |||||||| |||||||||    
T  37712200 gcataagctatttttcgtaagctcaa 37712225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 250
Target Start/End: Complemental strand, 35282686 - 35282547
Alignment:
Q  111 tgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgtt 210  Q
    ||||||| | || ||| ||||||||| || ||||||| ||||| | || | ||||||  ||||||||||||  ||||||||  |||||||||||||  ||    
T  35282686 tgcaaaacagcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaacaacttatgaagataaaattttaatt 35282587  T
Q  211 aataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    | | ||||||||||| ||||||||||||  ||||||||||    
T  35282586 agtgaaaacttatgaattaatataaaagtctatttatttg 35282547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 274
Target Start/End: Complemental strand, 37329487 - 37329340
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||  |||||||| | ||||||| || ||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||  | | ||||||| | |    
T  37329487 aaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaacttataaat 37329388  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  37329387 taacataaaagcttatttatttgcataagttatttttcataagctcaa 37329340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 104 - 250
Target Start/End: Original strand, 51162256 - 51162402
Alignment:
Q  104 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 203  Q
    ||||||||||||| || || ||| ||||||||| || || || | ||||| ||||| |||||||  ||||||||||||  ||||||||  || ||| |||    
T  51162256 gagcttatgcaaagtagcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaat 51162355  T
Q  204 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    |||||||||||| | ||||| | |||| ||||||| ||| |||||||    
T  51162356 tttcgttaataagatcttataaattaacataaaagtttaattatttg 51162402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 104 - 252
Target Start/End: Original strand, 12256594 - 12256741
Alignment:
Q  104 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 203  Q
    |||||||||||||| |||| ||| |||||| || |||||||| | ||||| | ||| ||||| |  ||||||||||||  |||| |||  ||| || |||    
T  12256594 gagcttatgcaaaacaacttatgtaaataattatgcttttatatattatttataagattgttgatgtagtttatgaaaa-acaatttatgaaggtacaat 12256692  T
Q  204 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 252  Q
    |||||||| ||| ||||||||| |||| ||||||  |||||||||||||    
T  12256693 tttcgttagtaagaacttatgaattaaaataaaaatttatttatttgta 12256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 102 - 249
Target Start/End: Complemental strand, 26946206 - 26946058
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 200  Q
    ||||||||||||||||   || ||| ||||||||| |||||| || | ||||||| |||||||||||  ||||||||||||  ||||||||  ||||||     
T  26946206 ttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatac 26946107  T
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttattt 249  Q
    ||||||| ||| | | ||||| ||| ||| || |||||||| |||||||    
T  26946106 aattttccttagtgacaacttgtgaattagtacaaaagcttgtttattt 26946058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 48819310 - 48819454
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||  ||||| || | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| | |||| |||| | | ||||||||| |    
T  48819310 aaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaacttatgaat 48819409  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||| ||||||||||||||||||| | ||| |||||||||||||||    
T  48819410 taacataaaagcttatttatttgcataagctatttttcataagct 48819454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 271
Target Start/End: Original strand, 10365159 - 10365325
Alignment:
Q  105 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 204  Q
    |||||||| ||||||| | ||| |||| ||||  ||||||| | ||||| | |||||||| ||| ||||||||||||  |||||  |  || ||| ||||    
T  10365159 agcttatgtaaaataatttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatgaaaa-acaaccgatgaatatacaatt 10365257  T
Q  205 ttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||||||| ||||||||| | | |||| ||||||||||||| ||||| | ||| |||||||||||||||    
T  10365258 ttcgttagtaaaaacttttaaattaacataaaagcttattcatttgcataagctatttttcataagct 10365325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 274
Target Start/End: Complemental strand, 16889040 - 16888897
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||| ||| | | || |||||| |    
T  16889040 aaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaatttatgact 16888942  T
Q  228 taatataaaagcttatttatttgtaaagatatttttcataagctcaa 274  Q
    ||| |||||||||||||||||||   | | |||||||||||||||||    
T  16888941 taacataaaagcttatttatttg--cataaatttttcataagctcaa 16888897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 211
Target Start/End: Original strand, 49971238 - 49971345
Alignment:
Q  104 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 203  Q
    |||||||||||||| |||| ||| |||||||||  | ||||||| ||||| | |||||||||||  ||||||||||||  ||| ||||  |||||| |||    
T  49971238 gagcttatgcaaaacaacttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacgaagatacaat 49971337  T
Q  204 tttcgtta 211  Q
    ||||||||    
T  49971338 tttcgtta 49971345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 6337831 - 6337709
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| ||||   | ||||||||| |    
T  6337831 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaacttatgaat 6337732  T
Q  228 taatataaaagcttatttatttg 250  Q
    ||| |||||||||||||| ||||    
T  6337731 taacataaaagcttatttgtttg 6337709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 10850068 - 10849999
Alignment:
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 269  Q
    ||||||||||||| ||||||||| | |||| || |||||||||||||||||| ||| |||||||||||||    
T  10850068 aattttcgttaatgaaaacttataaattaacatgaaagcttatttatttgtataagttatttttcataag 10849999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 12828145 - 12828257
Alignment:
Q  140 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaa--gataaaattttcgttaataaaaacttatgagttaatataaaa 237  Q
    |||||||| ||||||| ||  || ||||  ||||||||||||  |||||||| |||  |||||||||||||||||| |||||||||   |||||||||||    
T  12828145 ttttatttgttattcataaaatttttaaggtagtttatgaaaaaacaacttataaaaagataaaattttcgttaatgaaaacttatagattaatataaaa 12828244  T
Q  238 gcttatttatttg 250  Q
    | |||| ||||||    
T  12828245 gtttatctatttg 12828257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 25485728 - 25485881
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 196  Q
    ||||||||| ||||| ||||| | || ||| |||||||||   |||||||| |||||||  | ||| ||||  ||||||||||||  |||| |||  |||    
T  25485728 ttggattgaacttatacaaaagagcttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaag 25485827  T
Q  197 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    |||||||||||| || | |||| |||| | |||||||||||  |||||||||||    
T  25485828 ataaaattttcgctagtgaaaatttataaattaatataaaaatttatttatttg 25485881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 36259324 - 36259244
Alignment:
Q  170 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    ||||||||||||  |||  ||| ||| ||| ||||||||||||| || |||||| | ||||||||||||||||||||||||    
T  36259324 tagtttatgaaaaaacagtttataaacatacaattttcgttaatgaagacttataaattaatataaaagcttatttatttg 36259244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 274
Target Start/End: Complemental strand, 1565345 - 1565303
Alignment:
Q  232 ataaaagcttatttatttgtaaagatatttttcataagctcaa 274  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  1565345 ataaaagcttatttatttgcaaagctatttttcataagctcaa 1565303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 274
Target Start/End: Complemental strand, 35897718 - 35897547
Alignment:
Q  108 ttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttat----gaaagtacaacttagaaagataaaat 203  Q
    |||||||||| |||| ||| ||||||||| | |||||||| ||||||| |||||| | ||| ||||||||    ||||  | |||||| || |||| |||    
T  35897718 ttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaaggaaaaaaaaacttataacgatacaat 35897619  T
Q  204 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||| ||| | |||| |||| | |||| ||||||| ||||||||||  | ||| ||||||||||||| ||||    
T  35897618 tttcattagtgaaaatttataaattaacataaaagtttatttatttacataagctatttttcataagttcaa 35897547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 15791460 - 15791541
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||||| | | ||||| | |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  15791460 aagatacaattttcgttaatgagagcttataaattaaaataaaagcttatttatttacataagctatttttcataagctcaa 15791541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 26542970 - 26543106
Alignment:
Q  114 aaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactt-agaaagataaaattttcgttaa 212  Q
    |||| |||| ||| ||||||||| |||||||| | ||||  | ||| |||||||  ||||||||||||  ||||||| |||||| || |||||||||||     
T  26542970 aaaacaacttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaacaacttaagaaag-tacaattttcgttag 26543068  T
Q  213 taaaaacttatgagttaatataaaagcttatttatttg 250  Q
    | ||||||||| |||||| || |||  |||||||||||    
T  26543069 tgaaaacttataagttaagattaaaatttatttatttg 26543106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 248
Target Start/End: Complemental strand, 3069929 - 3069809
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    |||||| || ||||| || | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||||  || | | ||||||||| |    
T  3069929 aaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaacttatgaat 3069830  T
Q  228 taatataaaagcttatttatt 248  Q
    ||| |||||||||||||||||    
T  3069829 taacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 19395851 - 19395935
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    |||||| ||||||||||| | ||| ||||| | |||| |||||| ||||||||| | || ||| |||||||||||||||||||||    
T  19395851 aagatacaattttcgttagtgaaagcttataaattaaaataaaaacttatttatatatataagctatttttcataagctcaatcc 19395935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 50919564 - 50919620
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    |||||| |||||||||||||||||||| || | |||| || ||||||||||||||||    
T  50919564 aagatacaattttcgttaataaaaactaataaattaacatgaaagcttatttatttg 50919620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 274
Target Start/End: Complemental strand, 41196773 - 41196638
Alignment:
Q  140 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 239  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| |||| | | | ||| ||| |||| ||||| ||    
T  41196773 ttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggc 41196674  T
Q  240 ttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||| | ||| |||||| |||||||||||    
T  41196673 ttatttatttgcataagctattttacataagctcaa 41196638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 201 - 274
Target Start/End: Original strand, 5347238 - 5347312
Alignment:
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||||| | |||||||   |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  5347238 aattttcgttaatcagaacttatagattaaaataaaagcttatttatttacataagctatttttcataagctcaa 5347312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 10082351 - 10082385
Alignment:
Q  217 aacttatgagttaatataaaagcttatttatttgt 251  Q
    ||||||||| |||||||||||||||||||||||||    
T  10082351 aacttatgaattaatataaaagcttatttatttgt 10082385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 3116071 - 3115990
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||| ||| | ||||| | |||| ||||||||||| ||||||  | ||| ||||||||||||||||||    
T  3116071 aagatacaattttcgttagtaagatcttataaattaaaataaaagcttacttatttacataagttatttttcataagctcaa 3115990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 9572707 - 9572755
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 145  Q
    |||||||||||||||| |||||| || ||| ||||||||| ||||||||    
T  9572707 ttggattgagcttatgaaaaatagcttatgcaaataaataagcttttat 9572755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 102 - 250
Target Start/End: Original strand, 20169249 - 20169397
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||||||||| |||| | || ||| ||||||||| |||||||| | ||||| | ||| || | || |||||||||||||  |||  ||| ||| ||| |    
T  20169249 ttgagcttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttataaatataca 20169348  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    |||| ||| ||| | ||||||  | |||| |||||| ||||||||||||    
T  20169349 atttccgtcaatgagaacttaaaaattaacataaaaacttatttatttg 20169397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 28690114 - 28690162
Alignment:
Q  227 ttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  28690114 ttaacataaaagcttatttatttgcataagctatttttcataagctcaa 28690162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 42591459 - 42591543
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    |||||| | ||||||||| | ||| ||||| | |||| |||||| |||||||||||  | ||| |||||||||||||||||||||    
T  42591459 aagatacacttttcgttagtgaaagcttataaattaaaataaaaacttatttatttacataagctatttttcataagctcaatcc 42591543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 47413482 - 47413530
Alignment:
Q  227 ttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  47413482 ttaacataaaagcttatttatttgcataagctatttttcataagctcaa 47413530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 7e-29; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 32901242 - 32901073
Alignment:
Q  109 tatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcg 208  Q
    ||||||||| |||| ||| ||||||||| |||||||||| ||||||||||  ||||||| ||||||||| | |  ||||||||  |||||||||||||||    
T  32901242 tatgcaaaacaacttatgtaaataaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcg 32901143  T
Q  209 ttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||| | | |||||||   ||||||||||| | |||||||||| | ||| |||||||||||||||||||||    
T  32901142 ttagtgagaacttatattttaatataaaaacatatttatttgcataagctatttttcataagctcaatcc 32901073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 128 - 274
Target Start/End: Complemental strand, 43971922 - 43971775
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |  |||| |||  |||||||||||||||||| | | |||||||   |    
T  43971922 aaataaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgttagtgagaacttatattt 43971823  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||| ||||| | |||||||||| | ||| ||||||||||||||||||    
T  43971822 taatttaaaaacatatttatttgcataagttatttttcataagctcaa 43971775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 97 - 274
Target Start/End: Complemental strand, 3876369 - 3876191
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 196  Q
    ||||||||||||||| ||||| | || ||| ||||||||  |||||||||| ||||||| || || |||||  ||||||||||||  ||||||||  |||    
T  3876369 ttggattgagcttatacaaaacagcttatgtaaataaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaacaacttaagaag 3876270  T
Q  197 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
     |||| |||| |||| |   ||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||||||    
T  3876269 gtaaagtttttgttagttctaacttatgaattaatataaaaacttatttatttgcataagctatttttcataagctcaa 3876191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 102 - 277
Target Start/End: Complemental strand, 33946643 - 33946475
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||||| || ||| ||||||||| |||||||||| |||||         |||||  || |||||||||   |||||||   |||||||    
T  33946643 ttgagcttatgcaaaatagcttatgcaaataaataagcttttatttattatta--------gttaaggtaatttatgaaaaaccaacttatgtagataaa 33946552  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    |||||||||||| | ||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||||||||    
T  33946551 attttcgttaatgagaacttatgaattaatataaaagctcatttatttgcataagctatttttcataagctcaatcc 33946475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 102 - 270
Target Start/End: Complemental strand, 34707814 - 34707645
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| |||| | | ||||| ||| |||||||| | ||||||| |||||||||||  ||||||||||||  ||| || |  |||||| |    
T  34707814 ttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttatgaaaaaacagctaacgaagataca 34707715  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg-taaagatatttttcataagc 270  Q
    ||||||||||   | |||||| || |||| |||||| |||||||||||| | ||| ||||||||||||||    
T  34707714 attttcgttagcgagaacttacgaattaacataaaaacttatttatttgcttaagttatttttcataagc 34707645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 128 - 272
Target Start/End: Complemental strand, 43080009 - 43079864
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||| | | | ||||||||| |    
T  43080009 aaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtgattgagaacttatgaat 43079910  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctc 272  Q
    |||  |||||||||||||||||| | ||| ||||||||||||||||    
T  43079909 taacttaaaagcttatttatttgaataagctatttttcataagctc 43079864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 51409378 - 51409550
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||||||||| |||||| || ||| |||||||||  ||||||||| |||||||  || |||| ||  ||||||||||||  ||||||||  ||||||||    
T  51409378 ttgagcttatggaaaatagcttatgcaaataaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaacaacttatgaagataaa 51409477  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||| |  || | |||| |||||| ||||||||||| |||||||||||||| ||| || ||||||||| |||||    
T  51409478 atttccaatactgaaaaattatgaattaatataaaa-cttatttatttgtataagctacttttcataatctcaa 51409550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 274
Target Start/End: Complemental strand, 40240652 - 40240505
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||| | |||||||| | ||||||| |||| |||  |  ||||||||||||  ||||||||  |||||| ||||||||||| | | | ||||||| |    
T  40240652 aaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgagagcttatgaat 40240553  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  40240552 taagataaaagcttatttatttgcataagctatttttcataagctcaa 40240505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 22809295 - 22809121
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 200  Q
    ||||| |||||||||| | || ||| ||||||||| |||||| || | ||||||| |||||||| ||  ||||||||||||  ||  ||||  ||||||     
T  22809295 ttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatgaagatac 22809196  T
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||||||||| || ||||||||| |||| |||||| |||||||||||| | ||| | | ||||||||||||||    
T  22809195 aattttcgttaagaagaacttatgaattaacataaaaacttatttatttgcacaagctttatttcataagctcaa 22809121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 102 - 266
Target Start/End: Complemental strand, 40581178 - 40581012
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-aaagtacaacttagaaagataa 200  Q
    |||||||||||||||| |||| ||| ||||||||| |||||||| | ||||| | |||||||| ||  ||||||||| |||  ||| | ||  |||| |     
T  40581178 ttgagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacagcgtatgaagaaac 40581079  T
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcat 266  Q
    ||||||||||| | | ||||||||| |||| |||||| |||||||||||| | ||||||||||||||    
T  40581078 aattttcgttagtgagaacttatgaattaacataaaatcttatttatttgcataagatatttttcat 40581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 245
Target Start/End: Complemental strand, 53218138 - 53217998
Alignment:
Q  105 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 204  Q
    ||||||||||||| |||| |||  |||||||| | |||||| | ||||||| |||||||| ||  ||||||||||||  |||||||   |||||| ||||    
T  53218138 agcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaatt 53218039  T
Q  205 ttcgttaataaaaacttatgagttaatataaaagcttattt 245  Q
    ||||||| | | ||||||| | |||| ||||||||||||||    
T  53218038 ttcgttagtgagaacttataaattaaaataaaagcttattt 53217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 36266307 - 36266392
Alignment:
Q  193 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    |||||||  |||||||||||||||||||||| | |||| |||||| |||||||||||| | ||  |||||||||||||||||||||    
T  36266307 aaagatatgattttcgttaataaaaacttataaattaaaataaaaacttatttatttgcataaattatttttcataagctcaatcc 36266392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 128 - 274
Target Start/End: Original strand, 585031 - 585177
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| ||||||||   ||||||| |||||| || |  ||||||||||||  ||||||||  |||||| ||||||||||| |   |||||| || |    
T  585031 aaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtttgaacttaagaat 585130  T
Q  228 taatataaaagcttatttatttgtaaagatatttttcataagctcaa 274  Q
    ||| ||| ||||||||| ||||| | |  ||||||||||||||||||    
T  585131 taacatataagcttattgatttgaataactatttttcataagctcaa 585177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 277
Target Start/End: Original strand, 38524172 - 38524249
Alignment:
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||||||||||| ||| | ||||||| |||| ||||||||||||||||||| | ||| | |||||||||||||||||||    
T  38524172 aattttcgttagtaagatcttatgaattaacataaaagcttatttatttgcataagctctttttcataagctcaatcc 38524249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 29270346 - 29270457
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| |||| ||   |||||||| |||||||| | ||||||| |||||| | || ||| |||||||||  ||| ||||  |||||| |    
T  29270346 ttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacagcttatgaagataca 29270445  T
Q  202 attttcgttaat 213  Q
    ||||||||||||    
T  29270446 attttcgttaat 29270457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 25341347 - 25341429
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaat 275  Q
    ||||||||||||||||||   ||||||| ||| ||||||||||| |||||||||||  | ||| | |||||||||||||||||    
T  25341347 aagataaaattttcgttagggaaaacttgtgaattaatataaaaacttatttatttacataagctctttttcataagctcaat 25341429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 42956254 - 42956132
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| | |||||| | ||||||| || |||||  || |||||||||| |  ||| |||| ||||||| ||||||||||| | | ||||||| | |    
T  42956254 aaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgagaacttataaat 42956155  T
Q  228 taatataaaagcttatttatttg 250  Q
    ||| |||||| ||||||||||||    
T  42956154 taacataaaaacttatttatttg 42956132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 45331370 - 45331248
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    |||||||||  ||||||| | |||| || ||||||||||| | |||||||||||  ||| ||||  |||||| |||||||| ||  || ||| ||||| |    
T  45331370 aaataaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattttcgctagcaagaacatatgaat 45331271  T
Q  228 taatataaaagcttatttatttg 250  Q
    ||| ||||||| |||||||||||    
T  45331270 taacataaaagtttatttatttg 45331248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 4974407 - 4974472
Alignment:
Q  213 taaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||||| ||||||| |||| ||||||||||||||||||| | ||| | |||||||||||||||||||    
T  4974407 taaaatcttatgaattaacataaaagcttatttatttgcataagctctttttcataagctcaatcc 4974472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 10448761 - 10448838
Alignment:
Q  104 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 181  Q
    |||||||||||||| |||| ||| ||||||||| || ||||| | ||||| | |||||||||||  ||||||||||||    
T  10448761 gagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaa 10448838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 17752140 - 17752059
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||||||| ||||||||||  | ||| ||||||||||||||||||    
T  17752140 aagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagctcaa 17752059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 19053460 - 19053379
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||||||| ||||||||||  | ||| ||||||||||||||||||    
T  19053460 aagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagctcaa 19053379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 170 - 274
Target Start/End: Complemental strand, 20174973 - 20174868
Alignment:
Q  170 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 268  Q
    ||||||||||||  ||||||||  || ||| ||||||||||| ||| | ||||||| |||  ||||||||||||||||||| | ||| | ||||||||||    
T  20174973 tagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttcataa 20174874  T
Q  269 gctcaa 274  Q
     |||||    
T  20174873 cctcaa 20174868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 201 - 277
Target Start/End: Original strand, 43376779 - 43376856
Alignment:
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    ||||||||  ||| ||||||||||| ||||||||||| |||||||| ||| | ||| | |||||||||||||||||||    
T  43376779 aattttcgcaaatgaaaacttatgaattaatataaaaacttatttagttgcataagctctttttcataagctcaatcc 43376856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 27769736 - 27769782
Alignment:
Q  204 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    |||||||||| ||||||||| | |||| |||||||||||||||||||    
T  27769736 tttcgttaatgaaaacttataaattaacataaaagcttatttatttg 27769782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 170 - 274
Target Start/End: Complemental strand, 48597900 - 48597794
Alignment:
Q  170 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaactta-tgagttaatataaaagcttatttatttgtaaaga-tatttttcata 267  Q
    |||| |||||||  ||||||||  |||||| ||||||||| | | | |||||| ||| |||| ||||||||||||||||||| ||| | |||||||| ||    
T  48597900 tagtgtatgaaaaaacaacttatgaagatacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttatttgcaaacactatttttcgta 48597801  T
Q  268 agctcaa 274  Q
    |||||||    
T  48597800 agctcaa 48597794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 422
Target Start/End: Original strand, 50642392 - 50642457
Alignment:
Q  357 taaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaa 422  Q
    ||||||| |||| ||||||||||  |||| |||||| ||| ||||| |||| ||||||||||||||    
T  50642392 taaaatgaattatattactgaaaacctggagatttcagcataaggagtgccgaaaccccagctgaa 50642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 53787798 - 53787705
Alignment:
Q  157 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    |||||| |||| |||||||| ||||  |||  ||| ||||||| |||||| |||| | | ||||||||| |||| |||||| ||||||||||||    
T  53787798 aagctttttaatatagtttacgaaaaaacagtttataaagatataatttttgttattgagaacttatgaattaagataaaaacttatttatttg 53787705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 3870297 - 3870189
Alignment:
Q  132 aaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaat 231  Q
    ||||| |||||||| |||| |||| |||||||| ||  ||||||||||||  ||||| ||  | |||| | ||||| ||||| | ||||||||| ||||     
T  3870297 aaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaacaacatatgatgatacacttttcattaatgagaacttatgaattaac 3870198  T
Q  232 ataaaagct 240  Q
    |||||||||    
T  3870197 ataaaagct 3870189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 203 - 274
Target Start/End: Original strand, 31787608 - 31787680
Alignment:
Q  203 ttttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||  | ||||||||| |||||||||| | ||||||||||| | ||  ||||||||||||||||||    
T  31787608 ttttcgttaaagagaacttatgaattaatataaacgtttatttatttgcataaactatttttcataagctcaa 31787680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 52895407 - 52895333
Alignment:
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttg--taaagatatttttcataagctcaa 274  Q
    ||||||||||| | | || |||||| |||| |||||||||||||||||||  |||| | |||||||||||||||||    
T  52895407 aattttcgttagtgagaatttatgaattaacataaaagcttatttatttgcctaaaca-atttttcataagctcaa 52895333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 7e-26; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 6758607 - 6758783
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 196  Q
    ||||||||||||||||||||| |||| ||| ||||||||| |||||| ||| |||| || |||||||||||  ||||||||||||    ||||||  |||    
T  6758607 ttggattgagcttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaag 6758706  T
Q  197 ataaaattttcgttaataaaaacttatgagttaatat-aaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||| || |||||||| | | ||||||||| ||||||| ||||||||||||||||| | ||| ||||||||| |||||    
T  6758707 atacaaatttcgttagtgagaacttatgaattaatataaaaagcttatttatttgcataagctatttttcagaagct 6758783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 102 - 277
Target Start/End: Original strand, 23239232 - 23239408
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||||||||| ||||||||| ||  ||||||||| |||||||||| ||||||| |||||||||||  | |||||| |||   ||| |||  | |||| |    
T  23239232 ttgagcttatgaaaaataacttatacaaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaagcaaattatgacgataca 23239331  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    | |||| ||| | | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  23239332 actttccttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 23239408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 100 - 274
Target Start/End: Complemental strand, 29623580 - 29623406
Alignment:
Q  100 gattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagata 199  Q
    |||||||||||||||||| |||| ||| |||||||||  ||||||||| ||||| |  || |||||||  ||||||||||||  ||||||||  || |||    
T  29623580 gattgagcttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaata 29623481  T
Q  200 aaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    || ||||||||| | | ||||||||| |||| || ||| |||||||||||| | ||| |||||||||||| |||||    
T  29623480 aagttttcgttagtgagaacttatgaattaacat-aaatcttatttatttgcataagctatttttcataaactcaa 29623406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 119 - 273
Target Start/End: Complemental strand, 32675973 - 32675818
Alignment:
Q  119 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 218  Q
    |||| ||| ||||||||| |||||||||| ||||||| ||||||  |||  | ||||||||||  | ||||||  |||||| ||||||| ||| | | ||    
T  32675973 aacttatgcaaataaataagcttttatttattattcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgagaa 32675874  T
Q  219 cttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctca 273  Q
    ||||||| ||||||||||| |||||||||||| | ||| |||||||||||||||||    
T  32675873 cttatgaattaatataaaaacttatttatttgcataagttatttttcataagctca 32675818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 97 - 276
Target Start/End: Complemental strand, 2040292 - 2040107
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-----aaagtacaactta 191  Q
    ||||||||||||||||||||| |||| ||  ||||||||| |||||||||| ||||||| ||| |||||||  || ||||||     |||  |||| |||    
T  2040292 ttggattgagcttatgcaaaacaacttatataaataaataagcttttatttattattcataagtttgttaaggtaatttatgaagaaaaaaaacaattta 2040193  T
Q  192 gaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatc 276  Q
     |||| || ||||||| ||| | | ||||||| | ||||||||||| |||||||||||| | ||| |||||||||| |||||||||    
T  2040192 taaagttacaattttcattagttagaacttataaattaatataaaaacttatttatttgcataagttatttttcatgagctcaatc 2040107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 102 - 270
Target Start/End: Complemental strand, 21891439 - 21891270
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||||||||||| |||| || ||| ||||||||| | ||| || | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |    
T  21891439 ttgagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaataacaacttatgaagataga 21891340  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagc 270  Q
    |||||||||   || ||||||||| |||| ||||||||||||| ||| | | ||| ||||||||||||||    
T  21891339 attttcgttcgcaagaacttatgaattaacataaaagcttattcattcgcataagctatttttcataagc 21891270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 3830020 - 3829885
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||||||||| ||||   || ||| |||||||||||||||||||| ||||||| ||  || |||   ||||||||||||  ||||||||  ||||||||    
T  3830020 ttgagcttatgaaaaacggcttatgcaaataaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagataaa 3829921  T
Q  202 attttcgttaataaaaacttatgagttaatataaaa 237  Q
    ||||| |||||||| ||||||||| |||| ||||||    
T  3829920 atttttgttaataagaacttatgaattaacataaaa 3829885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 128 - 272
Target Start/End: Complemental strand, 2034304 - 2034159
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||||| | ||| |||| ||  ||||||||||||  ||||||||  |||||| ||||||||| | ||| ||||||||| |    
T  2034304 aaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattttcgtaagtaataacttatgatt 2034205  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctc 272  Q
     || ||||||||||||||||||| | ||| ||||| ||||||||||    
T  2034204 caacataaaagcttatttatttgcataagctatttatcataagctc 2034159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 430
Target Start/End: Original strand, 12912248 - 12912328
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaa 430  Q
    ||||| ||||||||||||| |||||| |||| |||| |||||| ||||||||| || ||||||||||| ||||||||||||    
T  12912248 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgtcaaaaccccagatgaaagagtcaa 12912328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 439
Target Start/End: Complemental strand, 24394009 - 24393921
Alignment:
Q  351 agaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 439  Q
    |||| ||||||| ||||| |||||| |||| || | |||||| ||||||||| ||||||||||  ||||||||||||||||||||||||    
T  24394009 agaagctaaaattgattatattactaaaagccttgagatttcagcacaaggagtgccaaaaccttagctgaaagagtcaattacaagaa 24393921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 250
Target Start/End: Original strand, 10873971 - 10874117
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||| |||||||||||| || ||| | ||||||| |||||||| ||  ||| | |||||||||||  |||||||||| |  ||| ||||  |||||| |    
T  10873971 ttgagattatgcaaaatagcttatgcatataaataagcttttatatt--attaataagcttgttaaggtagtttatgagaaaacagcttatgaagataca 10874068  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    ||||| |||  | ||||||||||| |||| |||||||||||||||||||    
T  10874069 attttagttggtgaaaacttatgaattaacataaaagcttatttatttg 10874117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 101 - 249
Target Start/End: Original strand, 2255718 - 2255866
Alignment:
Q  101 attgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 200  Q
    |||||||||||||||||  ||| ||| ||||||||  |||||||| | | ||||| |||||||||||  || |||||||||  ||| ||||  ||||||     
T  2255718 attgagcttatgcaaaacgacttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatac 2255817  T
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttattt 249  Q
    |||||| | || | | ||| ||||| |||| ||||||||||||||||||    
T  2255818 aatttttggtagtgagaacatatgaattaacataaaagcttatttattt 2255866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 10184363 - 10184255
Alignment:
Q  170 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 268  Q
    ||||||||||||  |||| |||  |||| | ||||||||||| ||| | ||||| | |||| |||||||||||||||||| || ||| ||||||||||||    
T  10184363 tagtttatgaaaaaacaatttatgaagaaacaattttcgttagtaagagcttataaattaaaataaaagcttatttatttatataagctatttttcataa 10184264  T
Q  269 gctcaatcc 277  Q
    |||||||||    
T  10184263 gctcaatcc 10184255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 430
Target Start/End: Complemental strand, 165610 - 165531
Alignment:
Q  351 agaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaa 430  Q
    |||||||||||||||||| |||| | |||| || | |||||| ||||||| | || ||||||||||||||||||||||||    
T  165610 agaaactaaaatggattatattattaaaagtcttgagatttcagcacaagaagtgtcaaaaccccagctgaaagagtcaa 165531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 357 - 439
Target Start/End: Original strand, 18972621 - 18972703
Alignment:
Q  357 taaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 439  Q
    |||||| ||||| |||||| |||| || | |||||| ||||||||| ||||||||||  ||||||||||| ||||||||||||    
T  18972621 taaaattgattatattactaaaagccttgagatttcagcacaaggagtgccaaaaccttagctgaaagagacaattacaagaa 18972703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 6752915 - 6752972
Alignment:
Q  220 ttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatc 276  Q
    |||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  6752915 ttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatc 6752972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 271
Target Start/End: Complemental strand, 2027251 - 2027107
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| ||||||||   ||||||| ||| |||| || | |||||||||||  ||| ||||  |||||| || ||| |||| ||| ||||||||| |    
T  2027251 aaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttagtaagaacttatgaat 2027152  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||| ||||||| |||| |||||| | ||| |||||||||||||||    
T  2027151 taacataaaagtttatctatttgcataagctatttttcataagct 2027107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 7576915 - 7576812
Alignment:
Q  149 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 248  Q
    ||||||| ||||||||||| ||| ||||| |||  |||  |||  |||||| |||||||||| |||| ||||||| | |||| |||||| ||||||||||    
T  7576915 ttattcataagcttgttaacataatttataaaaaaacagtttatgaagatataattttcgttgataagaacttattaattaacataaaaacttatttatt 7576816  T
Q  249 tgta 252  Q
    ||||    
T  7576815 tgta 7576812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 10755285 - 10755211
Alignment:
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||| ||| ||||||||| |||| ||||||||||||||||||| | ||  ||||||||| ||||||||    
T  10755285 aattttcgttagtaagaacttatgaattaacataaaagcttatttatttgcataaactatttttcagaagctcaa 10755211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 9764400 - 9764319
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| ||||||||||||| || |||||| | |||| ||||||||||||||||||| | ||  ||||||||||||| ||||    
T  9764400 aagatacaattttcgttaatgaacacttataaattaacataaaagcttatttatttgcataaattatttttcataagttcaa 9764319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 24625862 - 24625915
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 181  Q
    |||||||||||||||||| | ||||||| |||||||||||  ||||||||||||    
T  24625862 aaataaatacgcttttatgtattattcataagcttgttaaggtagtttatgaaa 24625915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 10730210 - 10730142
Alignment:
Q  201 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 268  Q
    |||||| |||||||| ||||||||| |||| |||||| |||||||||||||| |||  |||||||||||    
T  10730210 aatttttgttaataagaacttatgaattaagataaaaacttatttatttgtataagtcatttttcataa 10730142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 6632646 - 6632733
Alignment:
Q  104 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 191  Q
    |||||||| ||||| |||| ||| ||||||||| |||||||| | ||||| | || ||||||||  ||||||||||||  ||||||||    
T  6632646 gagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaacaactta 6632733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 274
Target Start/End: Complemental strand, 23239275 - 23239232
Alignment:
Q  232 ataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  23239275 ataaaagcttatttatttgtataagttatttttcataagctcaa 23239232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 35071414 - 35071359
Alignment:
Q  217 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||||||||| |||| ||||||||||||||||||| | ||| |||||||||||||||    
T  35071414 aacttatgaattaacataaaagcttatttatttgcataagctatttttcataagct 35071359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 250
Target Start/End: Original strand, 10687292 - 10687443
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttat---tttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagat 198  Q
    |||||||||| ||||| | || ||| ||||||||| ||||| ||   |||||||||| |||| | ||||  ||||||||| ||  ||||||||   ||||    
T  10687292 ttgagcttattcaaaacagcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgtaaaaacaacttatggagat 10687391  T
Q  199 aaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    | |||||||||||   | |||||||||  | | |||||||||||||||||||    
T  10687392 acaattttcgttagcgagaacttatgaactgacataaaagcttatttatttg 10687443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 23239410 - 23239362
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 145  Q
    |||||||||||||||| |||||| || ||| ||||||||| ||||||||    
T  23239410 ttggattgagcttatgaaaaatagcttatgcaaataaataagcttttat 23239362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 2e-23; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 128 - 266
Target Start/End: Complemental strand, 13625596 - 13625456
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatga-aagtacaacttagaaagataaaattttcgttaataaaaacttatgag 226  Q
    ||||||||| |||||||||| ||||||| ||||||||| |  |||||||||| ||  ||| |||| ||||||||||||||||||| | ||||||||| |     
T  13625596 aaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgttagtgaaaacttataaa 13625497  T
Q  227 ttaatataaaagcttatttatttgta-aagatatttttcat 266  Q
    |||||||||||| ||||||||||| | ||| ||||||||||    
T  13625496 ttaatataaaagtttatttatttgcataagctatttttcat 13625456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 443
Target Start/End: Complemental strand, 19021489 - 19021396
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgcc 443  Q
    |||||||||||||||||||||||| ||||||  ||| |||||| | | ||||| |||||||||||||||| |||||||||||||||||| ||||    
T  19021489 aagaaactaaaatggattaaattattgaaagcttggagatttcagtataaggagtgccaaaaccccagctaaaagagtcaattacaagagtgcc 19021396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 350 - 446
Target Start/End: Complemental strand, 22639659 - 22639563
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 446  Q
    ||||||||||||||||||||| |||||||||  ||| ||||||  |||||||| |||||||||||||| | ||||||||| |||||||| |||||||    
T  22639659 aagaaactaaaatggattaaaatactgaaagtttggagatttcatcacaaggagtgccaaaaccccagttaaaagagtcagttacaagagtgccaaa 22639563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 42852011 - 42852150
Alignment:
Q  106 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattt 205  Q
    |||||||||||| | || ||  ||||||||| |||||||| | ||||||| |||||||| || |||||||||||||  |||||||| ||| ||| |||||    
T  42852011 gcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaacaacttataaa-atacaattt 42852109  T
Q  206 tcgttaataaaaacttatgagttaatataaaagcttattta 246  Q
    |||||| | | ||||||||| |||| |||||||||||||||    
T  42852110 tcgttagtgagaacttatgaattaacataaaagcttattta 42852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 274
Target Start/End: Complemental strand, 40152951 - 40152804
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| | |||||||| |||| || ||  ||||||| |||||||||||||  |||| |||  |||||||||||||||||  | | ||||||||| |    
T  40152951 aaataaataagtttttatttattatccataaatttgttaagatagtttatgaaaaaacaatttatgaagataaaattttcgttcttgagaacttatgaat 40152852  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||| ||||||||||| | ||||| ||||||||||| ||||    
T  40152851 taatataaaagattatttatttgcataagatgtttttcataagttcaa 40152804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 39143220 - 39143317
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||||||| ||| ||||| |||| |||||| ||| ||||| |||||||| |  |||| |||||||||||||||||| ||||||||    
T  39143220 aagaaactaaaatggattaaaataccgaaagcctggagatttcagcataaggagtgccaaaatcatagctaaaagagtcaattacaagagtgccaaaa 39143317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 7364410 - 7364262
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    ||||||||||| |||| | || ||| ||| ||||| |||| ||||| ||||||| |||||||||||  |||||||| ||   ||||||||  |||||| |    
T  7364410 ttgagcttatgtaaaacagctgatgcaaaaaaataagcttctatttattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagataca 7364311  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    || || |||| | | ||||||||| ||||||||||||||||||||||||    
T  7364310 atatttgttagtgagaacttatgaattaatataaaagcttatttatttg 7364262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 28625491 - 28625635
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||  | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| | | ||| ||||| |    
T  28625491 aaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacctatgaat 28625590  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||| ||||||||||||||||||| | ||| |||||||||||||||    
T  28625591 taacataaaagcttatttatttgcataagttatttttcataagct 28625635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 24030226 - 24030369
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||||||| |||||||| ||| ||||||||||||  ||| |||   | |||| ||||||||||| | | ||||||||| |    
T  24030226 aaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaaca-cttgcgaggatacaattttcgttagtgagaacttatgaat 24030324  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||| ||||||||||||||||||| | ||| ||||||| |||||||    
T  24030325 taacataaaagcttatttatttgcataagctatttttaataagct 24030369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 250
Target Start/End: Complemental strand, 13060697 - 13060555
Alignment:
Q  108 ttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttc 207  Q
    ||||| |||| |||| ||| ||||||||| |||||||| | || |||| |||||||| ||  ||||||||||||  ||| ||||  ||| ||  ||||||    
T  13060697 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttc 13060598  T
Q  208 gttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    |||| | | ||||||||| |||| |||||||||||||||||||    
T  13060597 gttagtgagaacttatgaattaacataaaagcttatttatttg 13060555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 35536885 - 35537002
Alignment:
Q  157 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aag 255  Q
    |||||||| || |||||||||||||  ||| ||||  |||||| ||||||||||| | | |||||||||  ||||||||||||||||||||||| | |||    
T  35536885 aagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgttactgagaacttatga-ataatataaaagcttatttatttgcataag 35536983  T
Q  256 atatttttcataagctcaa 274  Q
     |||||||||||| |||||    
T  35536984 ctatttttcataatctcaa 35537002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 6537176 - 6537080
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 447  Q
    ||||||||||||||||| ||||||||||||  |||| |||||| ||| ||||| |||||||| |  |||| |||||||||||||||| |||| |||||    
T  6537176 aagaaactaaaatggatgaaattactgaaactctggagatttcagcataaggagtgccaaaatctaagct-aaagagtcaattacaaaaatgtcaaaa 6537080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 29922290 - 29922117
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| |  | ||| ||||||||| | |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||   | ||| |    
T  29922290 ttgagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgcatataca 29922191  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||  ||| | | | ||||||| |||||||||||||||||||||||| | ||| |||||||||||| |||||    
T  29922190 attttttttagtgagagcttatgaattaatataaaagcttatttatttgcataagctatttttcataaactcaa 29922117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 40697083 - 40697164
Alignment:
Q  194 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| |||||| |||  | ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  40697083 aagatacaatttttgttcctgaaaacttatgaattaacataaaagcttatttatttgtataagctatttttcataagctcaa 40697164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 129 - 272
Target Start/End: Complemental strand, 11912176 - 11912032
Alignment:
Q  129 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 228  Q
    |||||||| |||||||| | || |||| || ||||| ||| |||||| |||||  | | ||||  |||||| |||||| |||| | | ||||||||| ||    
T  11912176 aataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgagaacttatgaatt 11912077  T
Q  229 aatataaaagcttatttatttg-taaagatatttttcataagctc 272  Q
    || || |||||||||||||||| | ||||||||||||||||||||    
T  11912076 aacatgaaagcttatttatttgctcaagatatttttcataagctc 11912032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 43318990 - 43319132
Alignment:
Q  104 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 203  Q
    |||||||||||||| |||| ||| ||||||||| |  ||||| | ||||| | |||||||||||  ||||||||||||  |||  |||  ||| || |||    
T  43318990 gagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataat 43319089  T
Q  204 tttcgttaataaaaacttatgagttaatataaaagcttattta 246  Q
    |||||||| | | ||||||||| |||| |||||| ||||||||    
T  43319090 tttcgttagtgagaacttatgaattaagataaaaacttattta 43319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 102 - 249
Target Start/End: Complemental strand, 2878777 - 2878631
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||| ||| | || ||| ||||||||| |||||||| | ||||||| ||| |||| ||  | ||||||||||  |||  |||||| |||| |    
T  2878777 ttgagcttatgctaaacagcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagtttagaa-gataca 2878679  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 249  Q
    ||||| |||| | ||||||| | | |||| ||||||||||||||||||    
T  2878678 atttttgttagtgaaaacttttaaattaacataaaagcttatttattt 2878631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 17657244 - 17657375
Alignment:
Q  119 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 218  Q
    |||| ||| ||||||||| |||||||| | ||||||| |||||||  |   ||||||||||||  ||| ||||  ||||||  |||||||||| | | ||    
T  17657244 aacttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaa 17657343  T
Q  219 cttatgagttaatataaaagcttatttatttg 250  Q
    ||||||| |||| ||||||| |||||||||||    
T  17657344 cttatgaattaacataaaaggttatttatttg 17657375  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 1868858 - 1868940
Alignment:
Q  129 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgtta 211  Q
    |||||||| |||||||| | |||||||||||||||| ||  ||||||||||||   |||||||  |||||| |||||||||||    
T  1868858 aataaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgtta 1868940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 22202037 - 22201959
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaa 180  Q
    |||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||  |||||||||||    
T  22202037 ttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 22201959  T

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Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 11163292 - 11163231
Alignment:
Q  193 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgtaaa 254  Q
    ||||||| ||||||||||| |   ||||||||| |||| |||||||||||||||||||||||    
T  11163292 aaagatacaattttcgttagtgcgaacttatgaattaacataaaagcttatttatttgtaaa 11163231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 17128263 - 17128348
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaa 187  Q
    |||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| || ||| | ||| |||||||||||| |||||    
T  17128263 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaatacaa 17128348  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 28357181 - 28357274
Alignment:
Q  157 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    |||||||| ||  ||||||||||||  |||  |||  |||||| ||||||||||||  ||||||||| | |||| |||||||||||||||||||    
T  28357181 aagcttgtcaatgtagtttatgaaaaaacaggttatgaagatacaattttcgttaacgaaaacttataaattaacataaaagcttatttatttg 28357274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 277
Target Start/End: Complemental strand, 1372094 - 1371921
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||||||||||| |  | ||| |||||||||| ||||||| | ||||| | |||||||| ||  | ||||||||||  |||  | |  |||||  |    
T  1372094 ttgagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagcttgtaaatgtggtttatgaaaa-acagttgatgaagattta 1371996  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 277  Q
    |||||||||||| | | ||||| | |||| |||||| |||||||||||||| ||| |||||||||||||||||||||    
T  1371995 attttcgttaatgaga-cttataaattaacataaaa-cttatttatttgtataagttatttttcataagctcaatcc 1371921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 10537321 - 10537241
Alignment:
Q  101 attgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 181  Q
    |||||||||||| |||| | || ||| ||||||||| |||||||| | ||||| | |||||||| || |||||||||||||    
T  10537321 attgagcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaa 10537241  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 41419533 - 41419633
Alignment:
Q  149 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 248  Q
    ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| | | ||||||| | |||| |||||| ||||||||||    
T  41419533 ttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacttatcaattaacataaaaacttatttatt 41419632  T
Q  249 t 249  Q
    |    
T  41419633 t 41419633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 416
Target Start/End: Complemental strand, 926818 - 926759
Alignment:
Q  357 taaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaacccca 416  Q
    |||||||||||| ||||||||||   ||| |||||| ||||||||| |||||||||||||    
T  926818 taaaatggattatattactgaaaatttggagatttcagcacaaggagtgccaaaacccca 926759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 6125389 - 6125444
Alignment:
Q  220 ttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||| |||||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  6125389 ttatgaattaatataaaagcttatttatttgcataagctatttttcataagttcaa 6125444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 274
Target Start/End: Original strand, 6144749 - 6144896
Alignment:
Q  128 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 227  Q
    ||||||||| |||||||| | ||| ||| |||||||| ||  || |||||||||  | | ||||  || ||| |||||| ||||   | ||||||||| |    
T  6144749 aaataaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgagaacttatgaat 6144848  T
Q  228 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||||||||||| |||||||| | ||  ||||||||||||||||||    
T  6144849 taatataaaagcttgtttatttgcataaactatttttcataagctcaa 6144896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 11991294 - 11991369
Alignment:
Q  106 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 181  Q
    |||||||||||| |||| ||| ||||||||| |||||||| | ||||| | |||||||| || || ||||||||||    
T  11991294 gcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaa 11991369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 38498623 - 38498699
Alignment:
Q  170 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 248  Q
    ||||||||||||  |||| ||| ||||||| |||||| |||| | ||||||||| | |||| |||||||||||||||||    
T  38498623 tagtttatgaaa--acaatttataaagatataatttttgttagtgaaaacttataaattaaaataaaagcttatttatt 38498699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 274
Target Start/End: Complemental strand, 40452532 - 40452405
Alignment:
Q  149 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatttt-cgttaataaaaacttatgagttaatataaaagcttatttat 247  Q
    ||||||| |||||||| ||  |||||||||||   ||| ||||  |||||| |||||| ||||| | | ||||||||| | || |||| |||||||||||    
T  40452532 ttattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgagaacttatgaataaacataatagcttatttat 40452433  T
Q  248 ttgta-aagatatttttcataagctcaa 274  Q
    ||| | ||| ||||||||||||||||||    
T  40452432 ttgcataagctatttttcataagctcaa 40452405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 41059860 - 41059717
Alignment:
Q  132 aaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaat 231  Q
    ||||| |||||||| | ||||||| |||||| | ||  | ||||||||||   || ||||  |||||  ||||||||||| | | ||||||||| ||||     
T  41059860 aaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattttcgttagtgagaacttatgaattaac 41059761  T
Q  232 ataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    ||||||||||||||||||| | ||  | ||||||||||||||||    
T  41059760 ataaaagcttatttatttgcataaactgtttttcataagctcaa 41059717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 140 - 246
Target Start/End: Complemental strand, 23087842 - 23087736
Alignment:
Q  140 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 239  Q
    |||||| | ||||| | ||||||||||| |||||||||||||  |||||| |  ||| || |||||| |||| | | ||||||||| ||||||||||| |    
T  23087842 ttttatgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgttagtgagaacttatgaattaatataaaaac 23087743  T
Q  240 ttattta 246  Q
    | |||||    
T  23087742 taattta 23087736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 27805968 - 27806048
Alignment:
Q  170 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 250  Q
    ||||||||||||  |||  ||| ||||||| |||||| |||| | ||||||||| | |||| ||||||| |||||||||||    
T  27805968 tagtttatgaaaaaacatgttataaagatacaatttttgttagtgaaaacttataaattaacataaaagtttatttatttg 27806048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 192 - 274
Target Start/End: Original strand, 41125748 - 41125832
Alignment:
Q  192 gaaagata-aaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg-taaagatatttttcataagctcaa 274  Q
    |||||||| ||||||| |||| | | ||||||||| |||| |||||||||||| ||||||  |||| |||||||||||| |||||    
T  41125748 gaaagatacaaattttagttagtgagaacttatgaattaacataaaagcttatatatttgcaaaagctatttttcataaactcaa 41125832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 42558693 - 42558645
Alignment:
Q  227 ttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  42558693 ttaaaataaaagcttatttatttgcataagctatttttcataagctcaa 42558645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 446
Target Start/End: Complemental strand, 9677 - 9581
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 446  Q
    ||||||||||||||||||||| |||| |||| |||  |||||| ||||||| | || ||||| ||||||| ||||||||| |||||||| |||||||    
T  9677 aagaaactaaaatggattaaaatactaaaagcctgaagatttcagcacaagaagtgtcaaaatcccagctaaaagagtcagttacaagagtgccaaa 9581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 94980 - 94900
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaa 430  Q
    ||||| ||||||||||||| |||| | |||| |||| |||||| ||||||||| |||||||| ||||||||||||||||||    
T  94980 aagaagctaaaatggattatattattaaaagcctggagatttcagcacaaggagtgccaaaatcccagctgaaagagtcaa 94900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 1038 - 1213
Alignment:
Q  97 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 196  Q
    |||||||  |||||| ||||| |||| ||| ||||||||| |||||||||| |||| || ||| |||||||  || |||||| ||  | ||||||  |||    
T  1038 ttggattaggcttatacaaaacaacttatgcaaataaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaag 1137  T
Q  197 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 271  Q
    ||| || |||| ||| | | |||||||   |||||||||||||||||||||||| | ||| |||||||||||||||    
T  1138 atacaaatttcattagtgagaacttatactttaatataaaagcttatttatttgcataagttatttttcataagct 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 1077 - 997
Alignment:
Q  350 aagaaactaaaatggattaaattactgaaaggctggcgatttctgcacaaggattgccaaaaccccagctgaaagagtcaa 430  Q
    ||||| ||||||||||||| |||||  |||| |||| |||||| ||| ||||| || ||||||||||||||||||||||||    
T  1077 aagaagctaaaatggattatattacaaaaagtctggagatttcagcataaggagtgacaaaaccccagctgaaagagtcaa 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 274
Target Start/End: Original strand, 24733 - 24905
Alignment:
Q  105 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaa--tagtttatgaaagtacaacttagaaagataaaa 202  Q
    |||||| |||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||||  ||||||||||||  ||| || |  |||||| ||    
T  24733 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 24832  T
Q  203 ttttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    | ||| ||| | | ||||||| | |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  24833 tattcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaa 24905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 24489 - 24317
Alignment:
Q  102 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 201  Q
    |||||||| | ||||| | || ||| ||||||||| |||| ||| | ||||||| |||||||| ||  ||||| || |||  ||||||||  |||||| |    
T  24489 ttgagcttctacaaaacagcttatgcaaataaata-gcttgtatgtattattcataagcttgtcaaggtagttgataaaataacaacttacgaagatata 24391  T
Q  202 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 274  Q
    |||||||||| ||||||||| ||| |||  |||||||| |||||||||| | ||  || |||||||||||||||    
T  24390 attttcgttagtaaaaacttgtgaattatcataaaagcctatttatttgcataaactacttttcataagctcaa 24317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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