View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19002_low_17 (Length: 291)
Name: NF19002_low_17
Description: NF19002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19002_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 42303609 - 42303886
Alignment:
| Q |
1 |
catttccgttgaaggtaaatttgagtatcggacaccaaatgacattgacacttgtaattacatacaatcattattaatttttcaaatcattactggtgtc |
100 |
Q |
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| T |
42303609 |
catttccgttgaaggtaaatttgagtatctgacaccaaatgacattgacacttgtaattacatacaatcattattaatttttcaaatcattactggtgtc |
42303708 |
T |
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| Q |
101 |
tacatgtcagtgttgtgtgcatcataccaaacactgtattgagtgaaacaaaaataaagtgtgaatttggcacttacgtgtcttgaaacttaacaaaagc |
200 |
Q |
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||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42303709 |
tacatgtcagtgttgtgtgcatcataccaaacactctaatgagtgaaacaaaaataaagtgtgaatttggcacttacgtgtcttgaaacttaacaaaagc |
42303808 |
T |
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| Q |
201 |
ataaccaaaaggaactgatttttgtcccaatgcctcagaaacattaagaggaagttgaaaatcatcaagttggtccct |
278 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42303809 |
ataaccaaaaggaacagatttttgtcccaatgcctcagaaacattaagaggaagttgaaaatcatcaagttggtccct |
42303886 |
T |
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