View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19002_low_22 (Length: 246)
Name: NF19002_low_22
Description: NF19002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19002_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 37307130 - 37307355
Alignment:
| Q |
1 |
acaatggtgaaccctcctttattttgaaatgggaggtttcaagtttcccgaagcataaattaaaccaacaaaaccagtctctaacggctcagtgtaattt |
100 |
Q |
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| T |
37307130 |
acaatggtgaaccctcctttattttgaaatgggaggtttcaagtttcccgaagcataaattaaaccaacaaaaccagtctctaacggctcagtgtaattt |
37307229 |
T |
|
| Q |
101 |
aatttagctacactacgccacctgtctactggtacatttcatttcatttttgcacaccccttcttgaatt-agttttttacttaattagtgtttgataat |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |
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| T |
37307230 |
aatttagctacactacgccacctgtctactggtacatttcatttcatttttgcacaccccttcttgaattaatttttttacttaattagtgtttgataat |
37307329 |
T |
|
| Q |
200 |
ttgtctaattaaaccaatatttattt |
225 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
37307330 |
ttgtctaattaaaccaatatttattt |
37307355 |
T |
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