View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19005_high_21 (Length: 268)
Name: NF19005_high_21
Description: NF19005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19005_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 16 - 254
Target Start/End: Original strand, 7594394 - 7594632
Alignment:
| Q |
16 |
tttatatgacaatgtggtgaattatcattggatgtcgctgtaaaatggtcttacaccaacaatgcacttctattaaactcgtatgaattgatagttnnnn |
115 |
Q |
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| T |
7594394 |
tttatatgacaatgtggtgacttatcattggatgtcgctgtaaaatggtcttacaccaacaatgcacttctattaaactcgtatgaattgatagttaaaa |
7594493 |
T |
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| Q |
116 |
nnnnnnnnnnnnntacacatgcattcatacaaactactctaagatatcactttgttatgttagatgcataaaatatttattttatcatatgtcactagat |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7594494 |
aaaagtaaaaaaatacacatgcattcatacaaactactctaagatatcactttgttatgttagatgcataaaatatttattttatcatatgtcactagat |
7594593 |
T |
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| Q |
216 |
gcatgtgtaaacataatttatgctcacatttgaaacaat |
254 |
Q |
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|||||||||||||||||||||||||||||| || ||||| |
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| T |
7594594 |
gcatgtgtaaacataatttatgctcacattagatacaat |
7594632 |
T |
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