View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19005_low_11 (Length: 369)

Name: NF19005_low_11
Description: NF19005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19005_low_11
NF19005_low_11
[»] chr4 (69 HSPs)
chr4 (103-352)||(3669588-3669837)
chr4 (9-132)||(46996415-46996535)
chr4 (102-151)||(20542834-20542883)
chr4 (102-150)||(24275278-24275326)
chr4 (103-142)||(40952571-40952610)
chr4 (102-140)||(5535745-5535783)
chr4 (102-136)||(11583782-11583816)
chr4 (102-151)||(5048466-5048515)
chr4 (102-151)||(13743918-13743967)
chr4 (102-151)||(17028264-17028313)
chr4 (102-151)||(23329401-23329450)
chr4 (102-151)||(23710895-23710944)
chr4 (102-151)||(31860682-31860731)
chr4 (102-139)||(34827544-34827581)
chr4 (102-151)||(42013206-42013255)
chr4 (102-151)||(48042651-48042700)
chr4 (102-151)||(51126165-51126214)
chr4 (102-150)||(15641284-15641332)
chr4 (102-142)||(20787625-20787665)
chr4 (110-150)||(21004001-21004041)
chr4 (102-142)||(21586987-21587027)
chr4 (102-142)||(23754223-23754263)
chr4 (102-142)||(48079547-48079587)
chr4 (102-142)||(50038481-50038521)
chr4 (102-142)||(50045703-50045743)
chr4 (102-137)||(3504108-3504143)
chr4 (102-140)||(4386393-4386431)
chr4 (102-132)||(5289733-5289763)
chr4 (102-140)||(16912470-16912508)
chr4 (100-130)||(30016954-30016984)
chr4 (102-140)||(33659803-33659841)
chr4 (97-151)||(42184699-42184753)
chr4 (102-132)||(43635867-43635897)
chr4 (102-132)||(44639825-44639855)
chr4 (106-140)||(49573914-49573948)
chr4 (102-140)||(55131567-55131605)
chr4 (102-140)||(55501233-55501271)
chr4 (102-151)||(2994752-2994801)
chr4 (102-151)||(9968332-9968381)
chr4 (102-151)||(24529604-24529653)
chr4 (102-147)||(25700521-25700566)
chr4 (102-151)||(25856041-25856090)
chr4 (102-151)||(27080103-27080151)
chr4 (102-151)||(30051403-30051452)
chr4 (102-151)||(31808353-31808402)
chr4 (102-151)||(32112345-32112394)
chr4 (97-142)||(33520610-33520655)
chr4 (102-151)||(36469902-36469951)
chr4 (102-151)||(45861065-45861114)
chr4 (102-151)||(46779354-46779403)
chr4 (110-151)||(49745502-49745543)
chr4 (102-151)||(50519322-50519371)
chr4 (102-151)||(51126136-51126185)
chr4 (95-132)||(54569435-54569472)
chr4 (95-132)||(54927129-54927166)
chr4 (102-135)||(56420507-56420540)
chr4 (102-142)||(9052000-9052040)
chr4 (97-141)||(16667090-16667134)
chr4 (102-138)||(22020147-22020183)
chr4 (103-135)||(36786182-36786214)
chr4 (102-142)||(39754130-39754170)
chr4 (102-138)||(41459487-41459523)
chr4 (102-142)||(42911646-42911686)
chr4 (102-142)||(43635905-43635945)
chr4 (102-142)||(49806389-49806429)
chr4 (103-151)||(51834591-51834639)
chr4 (102-142)||(52256773-52256813)
chr4 (103-151)||(52281150-52281198)
chr4 (103-151)||(54787014-54787062)
[»] chr8 (32 HSPs)
chr8 (102-151)||(42631810-42631859)
chr8 (103-142)||(34326277-34326316)
chr8 (100-142)||(15715096-15715138)
chr8 (102-151)||(34194620-34194669)
chr8 (95-151)||(26489665-26489721)
chr8 (102-142)||(38883977-38884017)
chr8 (103-146)||(7428957-7429000)
chr8 (97-132)||(44282344-44282379)
chr8 (102-140)||(13841918-13841956)
chr8 (102-132)||(34194591-34194621)
chr8 (102-140)||(35969733-35969771)
chr8 (102-132)||(40716777-40716807)
chr8 (102-140)||(41178029-41178067)
chr8 (102-132)||(43483963-43483993)
chr8 (102-151)||(3611800-3611849)
chr8 (103-132)||(5040100-5040129)
chr8 (102-151)||(8568880-8568929)
chr8 (102-151)||(15715384-15715433)
chr8 (102-151)||(26492340-26492389)
chr8 (102-151)||(27781944-27781993)
chr8 (102-151)||(40305072-40305121)
chr8 (102-151)||(42666148-42666197)
chr8 (102-151)||(45441162-45441211)
chr8 (102-142)||(1875719-1875759)
chr8 (102-142)||(8568851-8568891)
chr8 (102-142)||(10150900-10150940)
chr8 (103-151)||(10934635-10934683)
chr8 (103-147)||(15754467-15754511)
chr8 (103-151)||(19293048-19293096)
chr8 (102-142)||(32016843-32016883)
chr8 (102-142)||(35969693-35969733)
chr8 (102-142)||(42749086-42749126)
[»] chr7 (49 HSPs)
chr7 (102-151)||(3498325-3498374)
chr7 (102-151)||(19532013-19532062)
chr7 (102-142)||(12171690-12171730)
chr7 (103-151)||(19688131-19688179)
chr7 (103-150)||(24934583-24934630)
chr7 (102-135)||(20353153-20353186)
chr7 (103-140)||(32941848-32941885)
chr7 (102-151)||(33471521-33471570)
chr7 (102-151)||(43067055-43067104)
chr7 (102-151)||(46477164-46477213)
chr7 (102-151)||(46578325-46578374)
chr7 (97-140)||(8169167-8169210)
chr7 (103-142)||(18732244-18732283)
chr7 (103-141)||(5691546-5691584)
chr7 (102-140)||(11602838-11602876)
chr7 (97-135)||(28409598-28409636)
chr7 (102-140)||(32599694-32599732)
chr7 (102-140)||(46578296-46578334)
chr7 (102-132)||(46658811-46658841)
chr7 (95-132)||(4027242-4027279)
chr7 (97-142)||(9503965-9504010)
chr7 (106-135)||(21387611-21387640)
chr7 (95-136)||(23736074-23736115)
chr7 (102-151)||(27163225-27163274)
chr7 (102-151)||(28003238-28003287)
chr7 (102-151)||(31319576-31319625)
chr7 (102-151)||(37066242-37066291)
chr7 (103-140)||(40211184-40211221)
chr7 (102-151)||(43813156-43813205)
chr7 (102-135)||(45833266-45833299)
chr7 (110-151)||(46221117-46221158)
chr7 (102-142)||(1742234-1742274)
chr7 (102-142)||(8595178-8595218)
chr7 (102-142)||(10595522-10595562)
chr7 (102-142)||(24211582-24211622)
chr7 (110-142)||(25814721-25814753)
chr7 (102-142)||(27940776-27940816)
chr7 (102-130)||(27942356-27942384)
chr7 (110-142)||(27942394-27942426)
chr7 (103-135)||(30138864-30138896)
chr7 (103-151)||(31549853-31549901)
chr7 (102-142)||(33471559-33471599)
chr7 (102-150)||(35160780-35160828)
chr7 (103-151)||(35593701-35593749)
chr7 (110-142)||(36711578-36711610)
chr7 (103-151)||(39970189-39970237)
chr7 (102-142)||(45833221-45833261)
chr7 (102-142)||(46658763-46658803)
chr7 (103-135)||(47778505-47778537)
[»] chr5 (53 HSPs)
chr5 (102-151)||(15966016-15966065)
chr5 (97-135)||(36137041-36137079)
chr5 (102-140)||(37554418-37554456)
chr5 (102-151)||(7336915-7336964)
chr5 (102-151)||(14274194-14274243)
chr5 (102-151)||(14571068-14571117)
chr5 (95-140)||(15966667-15966712)
chr5 (102-135)||(20362008-20362041)
chr5 (102-151)||(26168248-26168297)
chr5 (102-143)||(29807109-29807150)
chr5 (102-151)||(33545842-33545891)
chr5 (102-142)||(22474007-22474047)
chr5 (95-151)||(37039752-37039808)
chr5 (103-142)||(3100437-3100476)
chr5 (103-142)||(9004979-9005018)
chr5 (103-142)||(34102144-34102183)
chr5 (102-141)||(35245622-35245661)
chr5 (102-140)||(10495242-10495280)
chr5 (102-132)||(14064889-14064919)
chr5 (102-132)||(14416437-14416467)
chr5 (102-132)||(14571039-14571069)
chr5 (102-132)||(20367339-20367369)
chr5 (102-140)||(20503300-20503338)
chr5 (102-140)||(35067950-35067988)
chr5 (102-140)||(37685041-37685079)
chr5 (102-132)||(39126093-39126123)
chr5 (102-151)||(566324-566373)
chr5 (102-151)||(3161286-3161335)
chr5 (102-151)||(5226079-5226128)
chr5 (102-151)||(18003888-18003937)
chr5 (102-151)||(18942017-18942066)
chr5 (102-135)||(20503264-20503297)
chr5 (102-151)||(21152619-21152668)
chr5 (102-151)||(21159754-21159803)
chr5 (102-151)||(21163561-21163610)
chr5 (102-151)||(21344509-21344558)
chr5 (102-151)||(24433595-24433644)
chr5 (95-132)||(34186434-34186471)
chr5 (110-151)||(36346855-36346896)
chr5 (102-151)||(36964261-36964310)
chr5 (102-151)||(38860831-38860880)
chr5 (95-132)||(42480501-42480538)
chr5 (110-142)||(6271962-6271994)
chr5 (102-130)||(8409744-8409772)
chr5 (102-142)||(11784317-11784357)
chr5 (102-142)||(12165315-12165355)
chr5 (102-149)||(22565626-22565674)
chr5 (102-142)||(27304806-27304846)
chr5 (102-142)||(27990426-27990466)
chr5 (102-142)||(31787249-31787289)
chr5 (103-135)||(36895312-36895344)
chr5 (102-142)||(39916354-39916394)
chr5 (102-142)||(43585564-43585604)
[»] chr2 (49 HSPs)
chr2 (102-151)||(32473502-32473551)
chr2 (103-151)||(4637067-4637115)
chr2 (103-151)||(9071237-9071285)
chr2 (103-151)||(10041574-10041622)
chr2 (102-142)||(27743685-27743725)
chr2 (110-151)||(324835-324876)
chr2 (102-151)||(5144299-5144348)
chr2 (102-151)||(33052202-33052251)
chr2 (102-151)||(42230553-42230602)
chr2 (103-151)||(5580282-5580330)
chr2 (103-151)||(10099584-10099632)
chr2 (102-142)||(26567667-26567707)
chr2 (103-135)||(27331835-27331867)
chr2 (102-142)||(30202553-30202593)
chr2 (102-142)||(36490510-36490550)
chr2 (102-142)||(42579088-42579128)
chr2 (103-142)||(21488096-21488135)
chr2 (102-132)||(921847-921877)
chr2 (102-140)||(1088036-1088074)
chr2 (102-132)||(20195320-20195350)
chr2 (102-132)||(28680918-28680948)
chr2 (102-132)||(29771749-29771779)
chr2 (102-140)||(41824292-41824330)
chr2 (102-151)||(4898196-4898245)
chr2 (102-151)||(4945590-4945639)
chr2 (102-151)||(9709689-9709738)
chr2 (103-132)||(11153237-11153266)
chr2 (102-151)||(15080898-15080947)
chr2 (110-151)||(17378115-17378156)
chr2 (102-151)||(17843982-17844031)
chr2 (102-151)||(22352503-22352552)
chr2 (102-135)||(24971281-24971314)
chr2 (110-151)||(30905184-30905225)
chr2 (102-135)||(34466129-34466162)
chr2 (103-132)||(40534668-40534697)
chr2 (102-135)||(44274617-44274650)
chr2 (102-151)||(44402144-44402193)
chr2 (102-142)||(85753-85793)
chr2 (102-142)||(9158005-9158045)
chr2 (100-132)||(20195368-20195400)
chr2 (102-142)||(25668480-25668520)
chr2 (110-142)||(29712526-29712558)
chr2 (102-142)||(31211782-31211822)
chr2 (106-150)||(32226640-32226684)
chr2 (102-130)||(32346109-32346137)
chr2 (103-151)||(37396236-37396284)
chr2 (102-142)||(43341160-43341200)
chr2 (110-150)||(43514795-43514835)
chr2 (102-142)||(45123864-45123904)
[»] chr1 (65 HSPs)
chr1 (102-151)||(31909809-31909858)
chr1 (102-136)||(40328947-40328981)
chr1 (102-151)||(435237-435286)
chr1 (102-151)||(5852719-5852768)
chr1 (95-132)||(7230033-7230070)
chr1 (95-132)||(12447533-12447570)
chr1 (102-147)||(15278629-15278674)
chr1 (102-151)||(15311532-15311581)
chr1 (102-151)||(21909901-21909950)
chr1 (102-151)||(24807951-24808000)
chr1 (102-151)||(33738223-33738272)
chr1 (102-151)||(38847362-38847411)
chr1 (102-151)||(46518005-46518054)
chr1 (95-151)||(4682961-4683017)
chr1 (102-142)||(6763403-6763443)
chr1 (102-141)||(3606292-3606331)
chr1 (102-141)||(8751502-8751541)
chr1 (102-141)||(15055025-15055064)
chr1 (102-140)||(19580264-19580302)
chr1 (102-140)||(29673875-29673913)
chr1 (102-140)||(36163989-36164027)
chr1 (102-132)||(37255157-37255187)
chr1 (102-132)||(39181080-39181110)
chr1 (102-132)||(47293281-47293311)
chr1 (102-132)||(52879915-52879945)
chr1 (95-132)||(1252155-1252192)
chr1 (102-135)||(2349832-2349865)
chr1 (105-142)||(4838378-4838415)
chr1 (102-151)||(4974105-4974154)
chr1 (95-132)||(5431419-5431456)
chr1 (102-139)||(8751463-8751500)
chr1 (102-139)||(23944068-23944105)
chr1 (110-151)||(24478725-24478766)
chr1 (102-151)||(25378288-25378337)
chr1 (102-151)||(26660675-26660724)
chr1 (102-135)||(27206790-27206823)
chr1 (102-151)||(27549105-27549154)
chr1 (102-151)||(34037980-34038029)
chr1 (102-151)||(34062003-34062052)
chr1 (102-151)||(37255186-37255235)
chr1 (102-151)||(38149395-38149444)
chr1 (110-151)||(38824330-38824371)
chr1 (103-132)||(38824370-38824399)
chr1 (102-151)||(39015623-39015672)
chr1 (102-151)||(42761264-42761313)
chr1 (102-151)||(44673946-44673994)
chr1 (102-151)||(45239022-45239071)
chr1 (102-151)||(45925304-45925353)
chr1 (102-151)||(47011304-47011353)
chr1 (104-132)||(7230070-7230098)
chr1 (102-142)||(9135587-9135627)
chr1 (102-142)||(9947823-9947863)
chr1 (102-142)||(17988253-17988293)
chr1 (102-142)||(23392606-23392646)
chr1 (103-151)||(23394750-23394798)
chr1 (102-130)||(26453061-26453089)
chr1 (95-151)||(31327591-31327647)
chr1 (102-130)||(34598943-34598971)
chr1 (102-142)||(37215203-37215243)
chr1 (102-142)||(39181120-39181160)
chr1 (103-135)||(40341762-40341794)
chr1 (102-142)||(42788397-42788437)
chr1 (103-151)||(43384543-43384591)
chr1 (102-142)||(46590908-46590948)
chr1 (102-142)||(52253569-52253609)
[»] scaffold0635 (1 HSPs)
scaffold0635 (103-151)||(5448-5496)
[»] scaffold0340 (2 HSPs)
scaffold0340 (102-150)||(14094-14142)
scaffold0340 (102-130)||(14064-14092)
[»] scaffold0110 (2 HSPs)
scaffold0110 (95-150)||(10148-10203)
scaffold0110 (95-150)||(17885-17940)
[»] chr3 (40 HSPs)
chr3 (105-151)||(26770745-26770791)
chr3 (102-151)||(16127808-16127857)
chr3 (102-151)||(51256598-51256647)
chr3 (103-151)||(22528912-22528960)
chr3 (102-142)||(40326507-40326547)
chr3 (95-142)||(48906151-48906198)
chr3 (102-148)||(7672724-7672770)
chr3 (102-140)||(7672764-7672802)
chr3 (102-132)||(29076604-29076634)
chr3 (102-132)||(32589346-32589376)
chr3 (102-132)||(42595816-42595846)
chr3 (103-132)||(3972500-3972529)
chr3 (103-132)||(3994565-3994594)
chr3 (103-132)||(3997349-3997378)
chr3 (102-151)||(13927455-13927504)
chr3 (102-151)||(25990709-25990758)
chr3 (102-139)||(26770793-26770830)
chr3 (110-151)||(32833719-32833760)
chr3 (102-151)||(44435205-44435254)
chr3 (102-139)||(44544189-44544226)
chr3 (102-139)||(45819559-45819596)
chr3 (103-132)||(52638112-52638141)
chr3 (102-135)||(54680565-54680598)
chr3 (102-151)||(55198641-55198690)
chr3 (103-135)||(4980349-4980381)
chr3 (103-151)||(5919465-5919513)
chr3 (102-142)||(8126199-8126239)
chr3 (102-142)||(11582780-11582820)
chr3 (102-142)||(11582840-11582880)
chr3 (102-142)||(14626697-14626737)
chr3 (102-142)||(17005029-17005069)
chr3 (102-142)||(17501474-17501514)
chr3 (102-142)||(21831497-21831537)
chr3 (102-142)||(22995727-22995767)
chr3 (103-147)||(24596923-24596967)
chr3 (102-142)||(32827459-32827499)
chr3 (103-135)||(43333951-43333983)
chr3 (102-130)||(43898124-43898152)
chr3 (103-151)||(54726115-54726163)
chr3 (104-136)||(54985556-54985588)
[»] scaffold0121 (1 HSPs)
scaffold0121 (102-151)||(17494-17543)
[»] scaffold0011 (1 HSPs)
scaffold0011 (102-151)||(239-288)
[»] chr6 (21 HSPs)
chr6 (102-151)||(7418906-7418955)
chr6 (102-147)||(10731537-10731582)
chr6 (102-151)||(21478584-21478633)
chr6 (102-142)||(31577508-31577548)
chr6 (102-132)||(6047987-6048017)
chr6 (102-132)||(6048035-6048065)
chr6 (102-136)||(17181366-17181400)
chr6 (102-132)||(17854867-17854897)
chr6 (102-136)||(19687498-19687532)
chr6 (102-151)||(14173421-14173470)
chr6 (102-151)||(14177957-14178006)
chr6 (102-147)||(15467637-15467682)
chr6 (102-139)||(19687539-19687576)
chr6 (102-151)||(30507059-30507108)
chr6 (103-151)||(1302779-1302827)
chr6 (103-151)||(3012420-3012468)
chr6 (102-142)||(3750270-3750310)
chr6 (102-130)||(10258385-10258413)
chr6 (115-151)||(11400756-11400792)
chr6 (110-142)||(14804204-14804236)
chr6 (102-142)||(26295405-26295445)
[»] scaffold0756 (1 HSPs)
scaffold0756 (103-151)||(3550-3598)
[»] scaffold0542 (1 HSPs)
scaffold0542 (103-151)||(3474-3522)
[»] scaffold0236 (1 HSPs)
scaffold0236 (102-132)||(13726-13756)
[»] scaffold0321 (1 HSPs)
scaffold0321 (102-151)||(1664-1713)
[»] scaffold0172 (1 HSPs)
scaffold0172 (102-151)||(11644-11693)
[»] scaffold1786 (1 HSPs)
scaffold1786 (102-142)||(541-581)
[»] scaffold1266 (1 HSPs)
scaffold1266 (102-142)||(199-239)
[»] scaffold0047 (1 HSPs)
scaffold0047 (102-142)||(65951-65991)


Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 103 - 352
Target Start/End: Original strand, 3669588 - 3669837
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccaccctctagtttataatagtgacaggagggtgtannnnnnngtgcttgcaatg 202  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       ||||||||||||    
T  3669588 ttttagattcattcaattaatgacgtatgtagtttataatgtagaccaccctctggtttataatagtgacaggagggtgtatttttttgtgcttgcaatg 3669687  T
Q  203 ctaatttgcatgaagtaccaatatatatttttgaggttgatttcaatatcactaatttatgattcttattattgtaggaaaggagagaatgaaaatgata 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3669688 ctaatttgcatgaagtaccaatatatatttttgaggttgatttcaatatcactaatttatgattcttattattgtaggaaaggagagaatgaaaatgata 3669787  T
Q  303 gctattcttactccacagaagggtgtagaactgttaaggaaccaagagtt 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3669788 gctattcttactccacagaagggtgtagaactgttaaggaaccaagagtt 3669837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 46996415 - 46996535
Alignment:
Q  9 gaataatatgtaaagatactaggtttatgataggttgaaagtatgcaaagttaaaatattgtactacttaatcatcatgagatactaattaagtttttag 108  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||   |||||||||| ||||||||||||||||    
T  46996415 gaatattatgtaaggatactaggtttatgataggttgaaagtatgcaaggttaaagtattgtactactta---atcatgagatgctaattaagtttttag 46996511  T
Q  109 attcattcaattaatgatgtatgt 132  Q
     || ||| ||||||||||||||||    
T  46996512 gtttatttaattaatgatgtatgt 46996535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 20542834 - 20542883
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||||||||||| | ||||||| ||||||||    
T  20542834 tttttagattcattcaattaatgatgtatgtgggttataatatagaccac 20542883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 24275326 - 24275278
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagacca 150  Q
    |||||| |||||||||||||||||||||||| || ||||||||||||||    
T  24275326 tttttaaattcattcaattaatgatgtatgtggtctataatgtagacca 24275278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 40952571 - 40952610
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  40952571 ttttagattcattcaattaatgatgtatgtagtctataat 40952610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 5535745 - 5535783
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  5535745 tttttagattcattcaataaatgatgtatgtagtttata 5535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 136
Target Start/End: Complemental strand, 11583816 - 11583782
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtt 136  Q
    |||||||||||||||||||||||||||||||||||    
T  11583816 tttttagattcattcaattaatgatgtatgtagtt 11583782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 5048466 - 5048515
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||| |||||||||| ||||||||||||||| | ||||||    
T  5048466 tttttagattcatttaattaatgatatatgtagtttataatatggaccac 5048515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 13743967 - 13743918
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  13743967 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 13743918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 17028264 - 17028313
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||| ||||||||||||||| | ||||||    
T  17028264 tttttaggttcattcaattaatgatatatgtagtttataatatggaccac 17028313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 23329401 - 23329450
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  23329401 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 23329450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 23710944 - 23710895
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  23710944 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 23710895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 31860682 - 31860731
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||| |||||||||||||| ||| ||||| ||||||||    
T  31860682 tttttagattcattcatttaatgatgtatgtggttcataatatagaccac 31860731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 34827581 - 34827544
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttat 139  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  34827581 tttttagattcattcaattaatgatgtatgtggtttat 34827544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 42013255 - 42013206
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| || |||||||||||||||||||| ||||||||| ||||||||    
T  42013255 tttttaggtttattcaattaatgatgtatgtggtttataatatagaccac 42013206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 48042700 - 48042651
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||||||| ||| | ||||||||    
T  48042700 tttttaggttcattcaattaatgatgtatgtagttcatattatagaccac 48042651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 51126214 - 51126165
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| || |||||| ||||||||    
T  51126214 tttttaggttcattcaattaatgatgtatgtggtctataatatagaccac 51126165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 15641332 - 15641284
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagacca 150  Q
    ||||||| |||||||| |||||||||||||||||| ||||| |||||||    
T  15641332 tttttaggttcattcatttaatgatgtatgtagttcataatatagacca 15641284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 20787665 - 20787625
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  20787665 tttttagattcattcatttaatgatgtatgtggtttataat 20787625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 21004041 - 21004001
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataatgtagacca 150  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  21004041 ttcattcaattaatgatgtatgtggtctataatgtagacca 21004001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 21587027 - 21586987
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  21587027 tttttagattcattcaataaatgatgtatgtagtctataat 21586987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 23754223 - 23754263
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  23754223 tttttaggttcattcaattaatgatgtatgtggtttataat 23754263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 48079547 - 48079587
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  48079547 tttttaggttcattcaattaatgatgtatgtggtttataat 48079587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 50038481 - 50038521
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  50038481 tttttagattcattcaattaatgatgtatgtggttcataat 50038521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 50045703 - 50045743
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  50045703 tttttagattcattcaattaatgatgtatgtggttcataat 50045743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 3504108 - 3504143
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagttt 137  Q
    |||||||||||||||||||||||||||||| |||||    
T  3504108 tttttagattcattcaattaatgatgtatgcagttt 3504143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 4386431 - 4386393
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  4386431 tttttagattcattcaataaatgatctatgtagtttata 4386393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 5289733 - 5289763
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  5289733 tttttagattcattcaattaatgatgtatgt 5289763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 16912470 - 16912508
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  16912470 tttttagattcattcaataaatgatgtatgtagtctata 16912508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 130
Target Start/End: Complemental strand, 30016984 - 30016954
Alignment:
Q  100 agtttttagattcattcaattaatgatgtat 130  Q
    |||||||||||||||||||||||||||||||    
T  30016984 agtttttagattcattcaattaatgatgtat 30016954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 33659803 - 33659841
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  33659803 tttttaggttcattcaattaatgatgtatgtagtatata 33659841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 42184753 - 42184699
Alignment:
Q  97 ttaagtttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||| |||||||||||||||||||||| ||||||||  |||||||| || |||||    
T  42184753 ttaattttttagattcattcaattaataatgtatgtgatttataatataaaccac 42184699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 43635867 - 43635897
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  43635867 tttttagattcattcaattaatgatgtatgt 43635897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 44639855 - 44639825
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  44639855 tttttagattcattcaattaatgatgtatgt 44639825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 49573914 - 49573948
Alignment:
Q  106 tagattcattcaattaatgatgtatgtagtttata 140  Q
    ||||||||||||||||||||||||||| |||||||    
T  49573914 tagattcattcaattaatgatgtatgtggtttata 49573948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 55131567 - 55131605
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  55131567 tttttaggttcattcaattaatgatgtatgttgtttata 55131605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 55501233 - 55501271
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  55501233 tttttaggttcattcaattaatgatgtatgtggtttata 55501271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 2994752 - 2994801
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||||||| ||||| | ||||||    
T  2994752 tttttaggttcattcatttaatgatgtatgtagttcataatatggaccac 2994801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 9968332 - 9968381
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| | ||||||    
T  9968332 tttttaggttcattcaattaatgatgtatgtggttaataatatggaccac 9968381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 24529604 - 24529653
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||| | ||||||||    
T  24529604 tttttaggttcattcaattaatgatgtatgtggttcatattatagaccac 24529653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 25700566 - 25700521
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtaga 147  Q
    |||||||||||||||||| |||||||||||| || |||| ||||||    
T  25700566 tttttagattcattcaataaatgatgtatgtggtctatattgtaga 25700521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 25856041 - 25856090
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||| ||| |||||||||||| ||| ||||| ||||||||    
T  25856041 tttttagattcatttaatcaatgatgtatgtggttcataatatagaccac 25856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 27080151 - 27080103
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||||||||| |||||||| ||||||||| ||||||||    
T  27080151 tttttaggttcattcaattaat-atgtatgtggtttataatatagaccac 27080103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 30051452 - 30051403
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||| ||||||||||||||||||| ||| ||||| | ||||||    
T  30051452 tttttagattcgttcaattaatgatgtatgtggttcataatatggaccac 30051403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 31808353 - 31808402
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  31808353 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 31808402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 32112345 - 32112394
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| | ||||||    
T  32112345 tttttaggttcattcaattaatgatgtatgtggttcataatatggaccac 32112394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 33520655 - 33520610
Alignment:
Q  97 ttaagtttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||| |||||||||||||| |||||||||||||||| || ||||||    
T  33520655 ttaactttttagattcatttaattaatgatgtatgtggtctataat 33520610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 36469902 - 36469951
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||| |||||| |||||||||||||| ||| ||||| ||||||||    
T  36469902 tttttagatccattcatttaatgatgtatgtggttcataatatagaccac 36469951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 45861114 - 45861065
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||| |||||||||||||| ||| ||||| | ||||||    
T  45861114 tttttagattcattcatttaatgatgtatgtggttcataatatggaccac 45861065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 46779403 - 46779354
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||| |||||||||||||||| ||| ||||| || |||||    
T  46779403 tttttagattcatttaattaatgatgtatgtggttcataatataaaccac 46779354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 49745502 - 49745543
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  49745502 ttcattcaattaatgatgtatgtggtttataatatggaccac 49745543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 50519371 - 50519322
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||| | ||||||||    
T  50519371 tttttaggttcattcaattaatgatgtatgtggttcatattatagaccac 50519322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 51126136 - 51126185
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| || |||| | ||||||||    
T  51126136 tttttaggttcattcaattaatgatgtatgtggtctatattatagaccac 51126185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 54569472 - 54569435
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgt 132  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  54569472 aattaattttttaggttcattcaattaatgatgtatgt 54569435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 54927129 - 54927166
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgt 132  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  54927129 aattcagtttttagattcattcatttaatgatgtatgt 54927166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 56420540 - 56420507
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||||| ||||||||||||||||||||||||||    
T  56420540 tttttaggttcattcaattaatgatgtatgtagt 56420507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 9052040 - 9052000
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||| ||||||||||||||||||||||||| ||| |||||    
T  9052040 tttttcgattcattcaattaatgatgtatgtggttcataat 9052000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 16667090 - 16667134
Alignment:
Q  97 ttaagtttttagattcattcaattaatgatgtatgtagtttataa 141  Q
    |||| |||||||||| ||||||| ||||||||||||| |||||||    
T  16667090 ttaactttttagattgattcaataaatgatgtatgtaatttataa 16667134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 22020147 - 22020183
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagttta 138  Q
    |||||||||||||||||| |||||| |||||||||||    
T  22020147 tttttagattcattcaataaatgatatatgtagttta 22020183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 36786182 - 36786214
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagt 135  Q
    |||||||||||||||||||||||||||| ||||    
T  36786182 ttttagattcattcaattaatgatgtatatagt 36786214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 39754130 - 39754170
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| || ||||||||||||||||||||||| ||||||    
T  39754130 tttttaggtttattcaattaatgatgtatgtagtctataat 39754170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 41459523 - 41459487
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagttta 138  Q
    |||||||||||||||||| |||||| |||||||||||    
T  41459523 tttttagattcattcaataaatgatttatgtagttta 41459487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 42911646 - 42911686
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||| |||||||||||||| |||||||||    
T  42911646 tttttaggttcattcatttaatgatgtatgtggtttataat 42911686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 43635945 - 43635905
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| || |||||||||||||||||||||||| |||||    
T  43635945 tttttaggttgattcaattaatgatgtatgtagttcataat 43635905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 49806389 - 49806429
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||| |||||||||||||| ||||| |||||    
T  49806389 tttttagattcatttaattaatgatgtatatagttcataat 49806429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 51834639 - 51834591
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||||| ||||||||||| |||||  || ||||||||    
T  51834639 ttttagattcattcaattgatgatgtatgtggtttaatatttagaccac 51834591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 52256773 - 52256813
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||||||| |||||||||| |||||||||    
T  52256773 tttttaggttcattcaattattgatgtatgtggtttataat 52256813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 52281150 - 52281198
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||| ||||||||||| ||||||||||||||| ||||||  |||||||    
T  52281150 ttttatattcattcaataaatgatgtatgtagtatataataaagaccac 52281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 54787014 - 54787062
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| |||||||||| |||||||||||| ||||||| | ||||||||    
T  54787014 ttttaggttcattcaatcaatgatgtatgtggtttatattatagaccac 54787062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 42631810 - 42631859
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  42631810 tttttagattcattcaattaatgatgtatgtggtttataatatggaccac 42631859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 34326277 - 34326316
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  34326277 ttttagattcattcaattaatgatgtatgttgtttataat 34326316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 15715138 - 15715096
Alignment:
Q  100 agtttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  15715138 agtttttaggttcattcaattaatgatgtatgtggtttataat 15715096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 34194669 - 34194620
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||||||| ||||| | ||||||    
T  34194669 tttttaggttcattcaattaatgatgtatgtagttcataatatggaccac 34194620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 26489721 - 26489665
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| ||||||| |||||||||||||| |||||||| ||||||||| | ||||||    
T  26489721 aattaattttttaggttcattcaattaattatgtatgtggtttataatatggaccac 26489665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 38883977 - 38884017
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  38883977 tttttaggttcattcaattaatgatgtatgtggtttataat 38884017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 7429000 - 7428957
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtag 146  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||    
T  7429000 ttttagattcattcaataaatgatgtatgtgatttataatgtag 7428957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 44282379 - 44282344
Alignment:
Q  97 ttaagtttttagattcattcaattaatgatgtatgt 132  Q
    |||| |||||||||||||||||||||||||||||||    
T  44282379 ttaattttttagattcattcaattaatgatgtatgt 44282344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 13841956 - 13841918
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  13841956 tttttaggttcattcaataaatgatgtatgtagtttata 13841918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 34194591 - 34194621
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  34194591 tttttagattcattcaattaatgatgtatgt 34194621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 35969771 - 35969733
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  35969771 tttttaggttcattcaattaataatgtatgtagtttata 35969733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 40716777 - 40716807
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  40716777 tttttagattcattcaattaatgatgtatgt 40716807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 41178067 - 41178029
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  41178067 tttttagattcattcaattaatgatgcatgtggtttata 41178029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 43483963 - 43483993
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  43483963 tttttagattcattcaattaatgatgtatgt 43483993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 3611800 - 3611849
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||| | ||||||||    
T  3611800 tttttaggttcattcaattaatgatgtatgtggttcatattatagaccac 3611849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 5040100 - 5040129
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgt 132  Q
    ||||||||||||||||||||||||||||||    
T  5040100 ttttagattcattcaattaatgatgtatgt 5040129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 8568929 - 8568880
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||| | ||||||||    
T  8568929 tttttaggttcattcaattaatgatgtatgtggttcatattatagaccac 8568880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 15715384 - 15715433
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||| ||||||||||||||  || ||||| ||||||||    
T  15715384 tttttagattcattcatttaatgatgtatgtgattcataatatagaccac 15715433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 26492340 - 26492389
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| | ||||||    
T  26492340 tttttaggttcattcaattaatgatgtatgtggttcataatatggaccac 26492389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 27781993 - 27781944
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||  |||||||||||||||||||||| ||||||||| | ||||||    
T  27781993 tttttagggtcattcaattaatgatgtatgtggtttataatatggaccac 27781944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 40305121 - 40305072
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||||||||| || |||||    
T  40305121 tttttaggttcattcatttaatgatgtatgtggtttataatatacaccac 40305072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 42666148 - 42666197
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  42666148 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 42666197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 45441211 - 45441162
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  45441211 tttttagtttcattcatttaatgatgtatgtggttcataatatagaccac 45441162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 1875719 - 1875759
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| || ||||||    
T  1875719 tttttaggttcattcaattaatgatgtatgtggtctataat 1875759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 8568851 - 8568891
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| || ||||||    
T  8568851 tttttaggttcattcaattaatgatgtatgtggtctataat 8568891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 10150900 - 10150940
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  10150900 tttttaggttcattcaattaatgatgtatgtggttcataat 10150940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 10934635 - 10934683
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||| ||||||| ||||||||||||||||||| | || ||||||||||    
T  10934635 ttttacattcatttaattaatgatgtatgtagtctttattgtagaccac 10934683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 15754467 - 15754511
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtaga 147  Q
    |||||| |||||||| |||||||||||||||||| ||||| ||||    
T  15754467 ttttaggttcattcatttaatgatgtatgtagttcataatataga 15754511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 19293048 - 19293096
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| |||||||||| |||||||||||| ||||||| | ||||||||    
T  19293048 ttttaggttcattcaatcaatgatgtatgtggtttatattatagaccac 19293096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 32016883 - 32016843
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||| |||||||||||||| |||||||||    
T  32016883 tttttaggttcattcatttaatgatgtatgtggtttataat 32016843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 35969693 - 35969733
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||| | |||||||||    
T  35969693 tttttaggttcattcaattaatgatgtatatggtttataat 35969733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 42749086 - 42749126
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||| | ||||||||||||||| ||||||    
T  42749086 tttttagattcattcattaaatgatgtatgtagtctataat 42749126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 3498325 - 3498374
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  3498325 tttttagattcattcaattaatgatgtatgtggtttataatatggaccac 3498374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 19532062 - 19532013
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  19532062 tttttaggttcattcaattaatgatgtatgtagtttataatatggaccac 19532013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 12171690 - 12171730
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  12171690 tttttagattcatttaattaatgatgtatgtagtttataat 12171730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 19688131 - 19688179
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  19688131 ttttaggttcattcaataaatgatgtatgtagtttattatgtagaccac 19688179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 24934583 - 24934630
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagacca 150  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||||    
T  24934583 ttttaggttcattcaataaatgatgtatgtggtttataatgtagacca 24934630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 20353186 - 20353153
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||||||||||||||||||||||||||||||||    
T  20353186 tttttagattcattcaattaatgatgtatgtagt 20353153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 32941885 - 32941848
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttata 140  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  32941885 ttttagattcattcaatcaatgatgtatgtagtttata 32941848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 33471521 - 33471570
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||||||||||| ||| ||| | ||||||||    
T  33471521 tttttagattcattcaattaatgatgtatgtggttcatattatagaccac 33471570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 43067055 - 43067104
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| ||||||||    
T  43067055 tttttaggttcattcaattaatgatgtatgtggttcataatatagaccac 43067104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 46477164 - 46477213
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  46477164 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 46477213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 46578374 - 46578325
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||||||| ||||| || |||||    
T  46578374 tttttaggttcattcaattaatgatgtatgtagttcataatataaaccac 46578325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 8169210 - 8169167
Alignment:
Q  97 ttaagtttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||    
T  8169210 ttaactttttagattcattcaataaatgatgtatgtagtctata 8169167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 18732244 - 18732283
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  18732244 ttttaggttcattcaattaatgatgtatgtggtttataat 18732283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 5691584 - 5691546
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataa 141  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  5691584 ttttaaattcattcaattaatgatgtatgtggtttataa 5691546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 11602876 - 11602838
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  11602876 tttttagattcattcaataaatgatgtatgtagtctata 11602838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 28409598 - 28409636
Alignment:
Q  97 ttaagtttttagattcattcaattaatgatgtatgtagt 135  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  28409598 ttaactttttagattcattcaataaatgatgtatgtagt 28409636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 32599694 - 32599732
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  32599694 tttttagattcattcaataaatgatgtatgtagtctata 32599732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 46578296 - 46578334
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  46578296 tttttaaattcattcaattaatgatgtatgtggtttata 46578334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 46658841 - 46658811
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  46658841 tttttagattcattcaattaatgatgtatgt 46658811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 4027242 - 4027279
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgt 132  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  4027242 aattgagtttttagattcattcatttaatgatgtatgt 4027279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 9504010 - 9503965
Alignment:
Q  97 ttaagtttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||| |||||||||||||| |||||||||||||||| || ||||||    
T  9504010 ttaactttttagattcatttaattaatgatgtatgtggtatataat 9503965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 21387611 - 21387640
Alignment:
Q  106 tagattcattcaattaatgatgtatgtagt 135  Q
    ||||||||||||||||||||||||||||||    
T  21387611 tagattcattcaattaatgatgtatgtagt 21387640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 23736115 - 23736074
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgtagtt 136  Q
    |||||| ||||||| |||||| ||||||||||||||||||||    
T  23736115 aattaactttttaggttcatttaattaatgatgtatgtagtt 23736074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 27163274 - 27163225
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||| | ||| |||||||||||| ||||||||| ||||||||    
T  27163274 tttttagattcactaaataaatgatgtatgtggtttataatatagaccac 27163225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 28003287 - 28003238
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||||||||||||||||||  |||||||| | ||||||    
T  28003287 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccac 28003238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 31319625 - 31319576
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||||  ||||||||||||||| ||||||  |||||||    
T  31319625 tttttagattcattcaaaaaatgatgtatgtagtctataataaagaccac 31319576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 37066291 - 37066242
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||  ||||| ||||||||    
T  37066291 tttttaggttcattcaattaatgatgtatgtggtccataatatagaccac 37066242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 40211184 - 40211221
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttata 140  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  40211184 ttttagattcattcaatcaatgatgtatgtggtttata 40211221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 43813156 - 43813205
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||||| ||||| ||||||||| |||||| | ||||||    
T  43813156 tttttagattcattcaataaatgaagtatgtagtctataatattgaccac 43813205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 45833299 - 45833266
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagt 135  Q
    |||||||||||||||||||||||||||| |||||    
T  45833299 tttttagattcattcaattaatgatgtacgtagt 45833266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 46221117 - 46221158
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  46221117 ttcattcaattaatgatgtatgtggtttataatatggaccac 46221158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 1742274 - 1742234
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||| |||||||||||||||||||||| || ||||||    
T  1742274 tttttagactcattcaattaatgatgtatgtggtctataat 1742234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 8595178 - 8595218
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||| | ||||||||||||||| ||||||    
T  8595178 tttttagattcattcattaaatgatgtatgtagtctataat 8595218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 10595522 - 10595562
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||| |||| ||||||    
T  10595522 tttttaggttcattcaattaatgatgtatctagtctataat 10595562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 24211582 - 24211622
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||||||||| |||||||| ||| |||||    
T  24211582 tttttagattcattcaattaataatgtatgtggttcataat 24211622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 25814721 - 25814753
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||| ||||||||||||||||||||||||    
T  25814721 ttcattcatttaatgatgtatgtagtttataat 25814753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 27940776 - 27940816
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  27940776 tttttaggttcattcaattaatgatgtatgtggttcataat 27940816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Original strand, 27942356 - 27942384
Alignment:
Q  102 tttttagattcattcaattaatgatgtat 130  Q
    |||||||||||||||||||||||||||||    
T  27942356 tttttagattcattcaattaatgatgtat 27942384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 142
Target Start/End: Complemental strand, 27942426 - 27942394
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||||||||||| |||||||||    
T  27942426 ttcattcaattaatgatgtatgtggtttataat 27942394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 30138896 - 30138864
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagt 135  Q
    |||||||||||||||||||||||||||| ||||    
T  30138896 ttttagattcattcaattaatgatgtatatagt 30138864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 31549901 - 31549853
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| |||||||||| |||||||||||| ||||||||| || |||||    
T  31549901 ttttaggttcattcaatcaatgatgtatgtggtttataatataaaccac 31549853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 33471599 - 33471559
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| || ||||||    
T  33471599 tttttaggttcattcaattaatgatgtatgtggtctataat 33471559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 35160780 - 35160828
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagacca 150  Q
    ||||||| ||||||||||||||||||||||| ||| ||| | |||||||    
T  35160780 tttttaggttcattcaattaatgatgtatgtggttcatattatagacca 35160828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 35593749 - 35593701
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| ||||||||||||||||||||||| ||| ||||| | ||||||    
T  35593749 ttttaggttcattcaattaatgatgtatgtggttcataatatggaccac 35593701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 36711578 - 36711610
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||||||||||| |||||||||    
T  36711578 ttcattcaattaatgatgtatgtggtttataat 36711610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 39970189 - 39970237
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| |||||||||| |||||||||||| ||||||| | ||||||||    
T  39970189 ttttaggttcattcaatcaatgatgtatgtggtttatattatagaccac 39970237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 45833221 - 45833261
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  45833221 tttttaggttcattcaattaatgatgtatgtggttcataat 45833261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 46658763 - 46658803
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||||||||||||||||||| || |||||    
T  46658763 tttttaggttcattcaattaatgatgtatgtaattcataat 46658803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 47778537 - 47778505
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||| |||||||||||||||||||||||||||    
T  47778537 ttttaaattcattcaattaatgatgtatgtagt 47778505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 15966065 - 15966016
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  15966065 tttttaggttcattcaattaatgatgtatgtggtttataatatagaccac 15966016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 36137041 - 36137079
Alignment:
Q  97 ttaagtttttagattcattcaattaatgatgtatgtagt 135  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  36137041 ttaactttttagattcattcaattaatgatgtatgtagt 36137079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 37554456 - 37554418
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  37554456 tttttagattcattcaattaataatgtatgtagtttata 37554418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 7336964 - 7336915
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  7336964 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 7336915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 14274243 - 14274194
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||||||||||||| | ||||||    
T  14274243 tttttaggttcattcatttaatgatgtatgtagtttataatatggaccac 14274194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 14571117 - 14571068
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||||||||||| ||| ||||| | ||||||    
T  14571117 tttttagattcattcaattaatgatgtatgtggttcataatatggaccac 14571068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 15966667 - 15966712
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||    
T  15966667 aattaactttttaggttcattcaattaatgatgtatgtggtttata 15966712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 20362008 - 20362041
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||||||||||||||||||||||||||||||||    
T  20362008 tttttagattcattcaattaatgatgtatgtagt 20362041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 26168297 - 26168248
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  26168297 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 26168248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 29807109 - 29807150
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatg 143  Q
    ||||||||||||||||||||||||||||||| || |||||||    
T  29807109 tttttagattcattcaattaatgatgtatgtggtctataatg 29807150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 33545842 - 33545891
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||||||| ||||| ||||||||    
T  33545842 tttttaggttcattcatttaatgatgtatgtagttcataatatagaccac 33545891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 22474047 - 22474007
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  22474047 tttttagattcattcatttaatgatgtatgttgtttataat 22474007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 37039808 - 37039752
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  37039808 aattaaatttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 37039752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 3100437 - 3100476
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  3100437 ttttagattcattcaataaatgatgtatgtagtctataat 3100476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 9004979 - 9005018
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  9004979 ttttagattcatttaattaatgatgtatgtagtctataat 9005018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 34102183 - 34102144
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||||||||||||||||| ||| |||||    
T  34102183 ttttagattcattcaattaatgatgtatgtggttcataat 34102144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 141
Target Start/End: Original strand, 35245622 - 35245661
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataa 141  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  35245622 tttttaggttcattcaattaatgatgtatgtggtttataa 35245661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 10495242 - 10495280
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  10495242 tttttagattcattcaataaatgatgtatgtggtttata 10495280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 14064919 - 14064889
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  14064919 tttttagattcattcaattaatgatgtatgt 14064889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 14416437 - 14416467
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  14416437 tttttagattcattcaattaatgatgtatgt 14416467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 14571039 - 14571069
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  14571039 tttttagattcattcaattaatgatgtatgt 14571069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 20367339 - 20367369
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  20367339 tttttagattcattcaattaatgatgtatgt 20367369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 20503338 - 20503300
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  20503338 tttttaggttaattcaattaatgatgtatgtagtttata 20503300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 35067950 - 35067988
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  35067950 tttttaggttcattcaattaatgatgtatgtagtctata 35067988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 37685079 - 37685041
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  37685079 tttttagattcattcaattaataatgtatgtagtctata 37685041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 39126123 - 39126093
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  39126123 tttttagattcattcaattaatgatgtatgt 39126093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 566324 - 566373
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||| ||||||||| |||| ||| ||||| ||||||||    
T  566324 tttttagattcattcatttaatgatgcatgtggttcataatatagaccac 566373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 3161335 - 3161286
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||| | ||||||||| | ||||||    
T  3161335 tttttaggttcattcaattaatgatgtatatggtttataatatggaccac 3161286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 5226128 - 5226079
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||| |||||||||||||| ||| ||||| | ||||||    
T  5226128 tttttagattcattcatttaatgatgtatgtggttcataatatggaccac 5226079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 18003888 - 18003937
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  18003888 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 18003937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 18942017 - 18942066
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||| | ||| ||||| ||||||||    
T  18942017 tttttaggttcattcaattaatgatgtatatggttcataatatagaccac 18942066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 20503264 - 20503297
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||||| ||||||||||||||||||||||||||    
T  20503264 tttttaggttcattcaattaatgatgtatgtagt 20503297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 21152619 - 21152668
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||||||||||||||||||  |||||||| | ||||||    
T  21152619 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccac 21152668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 21159754 - 21159803
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||||||||||||||||||  |||||||| | ||||||    
T  21159754 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccac 21159803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 21163561 - 21163610
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||||||||||||||||||  |||||||| | ||||||    
T  21163561 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccac 21163610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 21344558 - 21344509
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||| |||||||||||||| ||| ||||| | ||||||    
T  21344558 tttttagattcattcatttaatgatgtatgtggttcataatatggaccac 21344509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 24433644 - 24433595
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| | ||||||    
T  24433644 tttttaggttcattcaattaatgatgtatgtggttcataatatggaccac 24433595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 34186471 - 34186434
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgt 132  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  34186471 aattgagtttttaggttcattcaattaatgatgtatgt 34186434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 36346896 - 36346855
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  36346896 ttcattcaattaatgatgtatgtggtttataatatggaccac 36346855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 36964261 - 36964310
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||| | ||||||||    
T  36964261 tttttaggttcattcaattaatgatgtatgtggttcatattatagaccac 36964310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 38860831 - 38860880
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||| | ||||||||    
T  38860831 tttttaggttcattcaattaatgatgtatgtggttcatattatagaccac 38860880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 42480501 - 42480538
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgt 132  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  42480501 aattaattttttaaattcattcaattaatgatgtatgt 42480538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 6271962 - 6271994
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||| ||||||||||||||||||||||    
T  6271962 ttcattcaataaatgatgtatgtagtttataat 6271994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 8409772 - 8409744
Alignment:
Q  102 tttttagattcattcaattaatgatgtat 130  Q
    |||||||||||||||||||||||||||||    
T  8409772 tttttagattcattcaattaatgatgtat 8409744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 11784317 - 11784357
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||||||||| |||||||||||| |||||    
T  11784317 tttttaggttcattcaattaataatgtatgtagttcataat 11784357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 12165315 - 12165355
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||| |||||||||||||||| || ||||||    
T  12165315 tttttagattcatttaattaatgatgtatgtggtatataat 12165355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 22565626 - 22565674
Alignment:
Q  102 tttttagattcattcaa-ttaatgatgtatgtagtttataatgtagacc 149  Q
    ||||||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  22565626 tttttaggttcattcaaattaatgatgtatgtggtttataatatagacc 22565674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 27304846 - 27304806
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  27304846 tttttaggttcattcaattaatgatgtatgtggttcataat 27304806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 27990466 - 27990426
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||||||||||||||||||| | ||||||    
T  27990466 tttttaggttcattcaattaatgatgtatgtaatctataat 27990426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 31787249 - 31787289
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  31787249 tttttaggttcattcaattaatgatgtatgtggttcataat 31787289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 36895344 - 36895312
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||||||||||||||| |||||||||||||||    
T  36895344 ttttagattcattcaataaatgatgtatgtagt 36895312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 39916394 - 39916354
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||||||||| |||||||| |||||||||    
T  39916394 tttttaggttcattcaattaataatgtatgtggtttataat 39916354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 43585604 - 43585564
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  43585604 tttttaggttcattcaattaatgatgtatgtggttcataat 43585564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 32473502 - 32473551
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  32473502 tttttagattcattcaattaatgatgtatgtggttcataatatagaccac 32473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 4637115 - 4637067
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  4637115 ttttagattcattcaattaatgatgtatgtggtttatattatagaccac 4637067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 9071237 - 9071285
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||||||||||||| |||||| || |||||    
T  9071237 ttttagattcattcaattaatgatgtatgtagtctataatataaaccac 9071285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 10041574 - 10041622
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  10041574 ttttagattcatttaattaatgatgtatgtggtttataatatagaccac 10041622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 27743725 - 27743685
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  27743725 tttttagattcattcaattaatgatgtatgtggtttataat 27743685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 324835 - 324876
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  324835 ttcattcaattaatgatgtatgtagtttataatatggaccac 324876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 5144299 - 5144348
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  5144299 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 5144348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 33052251 - 33052202
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||| |||||||||||||| ||||||||| | ||||||    
T  33052251 tttttagattcattcatttaatgatgtatgtggtttataatatggaccac 33052202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 42230553 - 42230602
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||| |||||||||||||| ||||||||| | ||||||    
T  42230553 tttttagattcattcatttaatgatgtatgtggtttataatatggaccac 42230602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 5580282 - 5580330
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||||||||||||||||| |||||  || ||||||||    
T  5580282 ttttagattcattcaattaatgatgtatgtggtttaatatttagaccac 5580330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 10099584 - 10099632
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| |||||| |||||||||||||||| ||||||||| ||||||||    
T  10099584 ttttaggttcatttaattaatgatgtatgtggtttataatatagaccac 10099632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 26567667 - 26567707
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  26567667 tttttaggttcattcaattaatgatgtatgtggtttataat 26567707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 27331867 - 27331835
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagt 135  Q
    |||||||||||||||||||||||||||||||||    
T  27331867 ttttagattcattcaattaatgatgtatgtagt 27331835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 30202593 - 30202553
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  30202593 tttttaggttcattcaattaatgatgtatgtagtctataat 30202553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 36490510 - 36490550
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  36490510 tttttagattcattcaattaatgatgtatgtggttcataat 36490550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 42579128 - 42579088
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  42579128 tttttagattcattcaattaatgatgtatgtggttcataat 42579088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 21488135 - 21488096
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  21488135 ttttagattcattcatttaatgatgtatgtggtttataat 21488096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 921847 - 921877
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  921847 tttttagattcattcaattaatgatgtatgt 921877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 1088036 - 1088074
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  1088036 tttttagattcattcatttaatgatgtatgtggtttata 1088074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 20195320 - 20195350
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  20195320 tttttagattcattcaattaatgatgtatgt 20195350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 28680948 - 28680918
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  28680948 tttttagattcattcaattaatgatgtatgt 28680918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 29771749 - 29771779
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  29771749 tttttagattcattcaattaatgatgtatgt 29771779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 41824292 - 41824330
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  41824292 tttttagattcattcaataaattatgtatgtagtttata 41824330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 4898196 - 4898245
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||||||||||||||||||  |||||||| | ||||||    
T  4898196 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccac 4898245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 4945590 - 4945639
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||||||||||||||||||  |||||||| | ||||||    
T  4945590 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccac 4945639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 9709689 - 9709738
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| || |||||||||||||||||||| ||||||||| | ||||||    
T  9709689 tttttaggttaattcaattaatgatgtatgtggtttataatatggaccac 9709738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 11153237 - 11153266
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgt 132  Q
    ||||||||||||||||||||||||||||||    
T  11153237 ttttagattcattcaattaatgatgtatgt 11153266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 15080947 - 15080898
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  15080947 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 15080898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 17378156 - 17378115
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||    
T  17378156 ttcattcaattaatgatgtatgtggttcatattgtagaccac 17378115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 17843982 - 17844031
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||| | ||||||||| | ||||||    
T  17843982 tttttaggttcattcaattaatgatgtatatggtttataatatggaccac 17844031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 22352552 - 22352503
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  22352552 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 22352503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 24971314 - 24971281
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||||| ||||||||||||||||||||||||||    
T  24971314 tttttaggttcattcaattaatgatgtatgtagt 24971281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 30905225 - 30905184
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  30905225 ttcattcaattaatgatgtatgtggtttataatatggaccac 30905184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 34466129 - 34466162
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||||| ||||||||||||||||||||||||||    
T  34466129 tttttaggttcattcaattaatgatgtatgtagt 34466162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Complemental strand, 40534697 - 40534668
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgt 132  Q
    ||||||||||||||||||||||||||||||    
T  40534697 ttttagattcattcaattaatgatgtatgt 40534668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 44274650 - 44274617
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagt 135  Q
    |||||||||||||||||| |||||||||||||||    
T  44274650 tttttagattcattcaataaatgatgtatgtagt 44274617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 44402193 - 44402144
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  44402193 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 44402144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 85793 - 85753
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  85793 tttttaggttcattcaattaatgatgtatgtggttaataat 85753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 9158005 - 9158045
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||| ||||||||||||||||||| ||| |||||    
T  9158005 tttttagattctttcaattaatgatgtatgtggttcataat 9158045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 20195400 - 20195368
Alignment:
Q  100 agtttttagattcattcaattaatgatgtatgt 132  Q
    ||||||||| |||||||||||||||||||||||    
T  20195400 agtttttaggttcattcaattaatgatgtatgt 20195368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 25668520 - 25668480
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||| |||||||||||||||| |||||||||    
T  25668520 tttttaggttcatttaattaatgatgtatgtggtttataat 25668480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 29712526 - 29712558
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||||||||||| |||||||||    
T  29712526 ttcattcaattaatgatgtatgtggtttataat 29712558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 31211822 - 31211782
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||| ||||||||||||||| ||| |||||    
T  31211822 tttttagattcattccattaatgatgtatgtggttcataat 31211782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 32226684 - 32226640
Alignment:
Q  106 tagattcattcaattaatgatgtatgtagtttataatgtagacca 150  Q
    ||||||||||||||||||||||||| |||||| || | |||||||    
T  32226684 tagattcattcaattaatgatgtatatagtttttattatagacca 32226640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Original strand, 32346109 - 32346137
Alignment:
Q  102 tttttagattcattcaattaatgatgtat 130  Q
    |||||||||||||||||||||||||||||    
T  32346109 tttttagattcattcaattaatgatgtat 32346137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 37396236 - 37396284
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||||||||||||||| |  |||||| | ||||||||    
T  37396236 ttttagattcattcaattaatgatgtatatgatttatattatagaccac 37396284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 43341160 - 43341200
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||||| ||||||| |||| |||||||||    
T  43341160 tttttagattcattcaataaatgatgcatgtggtttataat 43341200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 43514795 - 43514835
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataatgtagacca 150  Q
    ||||||||||||||||||||||| ||| ||||| |||||||    
T  43514795 ttcattcaattaatgatgtatgtggttcataatatagacca 43514835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 45123904 - 45123864
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||||||||| |||||||| |||||||||    
T  45123904 tttttaggttcattcaattaataatgtatgtggtttataat 45123864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 31909858 - 31909809
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  31909858 tttttaggttcattcaattaatgatgtatgtggtttataatatagaccac 31909809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 136
Target Start/End: Complemental strand, 40328981 - 40328947
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtt 136  Q
    |||||||||||||||||||||||||||||||||||    
T  40328981 tttttagattcattcaattaatgatgtatgtagtt 40328947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 435237 - 435286
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||| |||||||||||||| ||||||||| | ||||||    
T  435237 tttttagattcattcatttaatgatgtatgtggtttataatatggaccac 435286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 5852719 - 5852768
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  5852719 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 5852768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 7230033 - 7230070
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgt 132  Q
    |||||| |||||||||||||||||||||||||||||||    
T  7230033 aattaactttttagattcattcaattaatgatgtatgt 7230070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 12447570 - 12447533
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgt 132  Q
    |||||| |||||||||||||||||||||||||||||||    
T  12447570 aattaactttttagattcattcaattaatgatgtatgt 12447533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 15278674 - 15278629
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtaga 147  Q
    ||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  15278674 tttttaggttcattcaattaatgatgtatgtggtttataatataga 15278629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 15311581 - 15311532
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||||||||||||| | ||||||    
T  15311581 tttttaggttcattcatttaatgatgtatgtagtttataatatggaccac 15311532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 21909950 - 21909901
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||| |||||||||||||||||||||||| ||||| | ||||||    
T  21909950 tttttagatttattcaattaatgatgtatgtagttcataatatggaccac 21909901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 24808000 - 24807951
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||||| ||||||||||| ||| ||| |||||||||||    
T  24808000 tttttagattcattcaataaatgatgtatgcagtctattatgtagaccac 24807951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 33738272 - 33738223
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  33738272 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 33738223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 38847411 - 38847362
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||||||||| ||||||||    
T  38847411 tttttaggttcattcatttaatgatgtatgtggtttataatatagaccac 38847362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 46518054 - 46518005
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  46518054 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 46518005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 4682961 - 4683017
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| |||||||||| |||||||||||||||||||| ||| ||| | ||||||||    
T  4682961 aattaactttttagatttattcaattaatgatgtatgtggttcatattatagaccac 4683017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 6763443 - 6763403
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  6763443 tttttaggttcattcaattaatgatgtatgtggtttataat 6763403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 141
Target Start/End: Original strand, 3606292 - 3606331
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataa 141  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  3606292 tttttagattcattcaattaatgatgtatgtggttcataa 3606331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 8751541 - 8751502
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataa 141  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  8751541 tttttaggttcattcaattaatgatgtatgtggtttataa 8751502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 15055064 - 15055025
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataa 141  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  15055064 tttttagattcattcaattaatgatatatgtggtttataa 15055025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 19580302 - 19580264
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  19580302 tttttagattcattcaataaatgatgtatgtagtgtata 19580264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 29673913 - 29673875
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  29673913 tttttagattcattcatttaatgatgtatgtagtctata 29673875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 36163989 - 36164027
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  36163989 tttttagatttattcaataaatgatgtatgtagtttata 36164027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 37255157 - 37255187
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  37255157 tttttagattcattcaattaatgatgtatgt 37255187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 39181080 - 39181110
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  39181080 tttttagattcattcaattaatgatgtatgt 39181110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 47293281 - 47293311
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  47293281 tttttagattcattcaattaatgatgtatgt 47293311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 52879915 - 52879945
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  52879915 tttttagattcattcaattaatgatgtatgt 52879945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 1252155 - 1252192
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgt 132  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  1252155 aattaactttttaggttcattcaattaatgatgtatgt 1252192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 2349865 - 2349832
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||||||| ||||||||||||||||||||||||    
T  2349865 tttttagatacattcaattaatgatgtatgtagt 2349832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 4838415 - 4838378
Alignment:
Q  105 ttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  4838415 ttaggttcattcaattaatgatgtatgtggtttataat 4838378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 4974154 - 4974105
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||| |||||||||||||| ||| ||||| | ||||||    
T  4974154 tttttagattcattcatttaatgatgtatgtggttcataatatggaccac 4974105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 5431456 - 5431419
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgt 132  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  5431456 aattaactttttagattcattcaataaatgatgtatgt 5431419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 8751463 - 8751500
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttat 139  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  8751463 tttttaggttcattcaattaatgatgtatgtggtttat 8751500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 23944068 - 23944105
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttat 139  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  23944068 tttttagatacattcaattaatgatgtatgtggtttat 23944105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 24478766 - 24478725
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| |||||||||||||||| ||||||||| ||||||||    
T  24478766 ttcatttaattaatgatgtatgtggtttataatatagaccac 24478725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 25378288 - 25378337
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| | ||||||    
T  25378288 tttttaggttcattcaattaatgatgtatgtggttcataatattgaccac 25378337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 26660675 - 26660724
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| | ||||||    
T  26660675 tttttaggttcattcaattaatgatgtatgtggttcataatatggaccac 26660724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 27206790 - 27206823
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||||||| ||||||||||||||||||||||||    
T  27206790 tttttagatacattcaattaatgatgtatgtagt 27206823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 27549154 - 27549105
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| | ||||||    
T  27549154 tttttaggttcattcaattaatgatgtatgtggttcataatatggaccac 27549105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 34038029 - 34037980
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||| | ||||||||    
T  34038029 tttttaggttcattcaattaatgatgtatgtggttcatattatagaccac 34037980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 34062052 - 34062003
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||| ||| ||||||    
T  34062052 tttttaggttcattcaattaatgatgtatgtggttcatattgttgaccac 34062003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 37255235 - 37255186
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| | ||||||    
T  37255235 tttttaggttcattcaattaatgatgtatgtggttaataatatggaccac 37255186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 38149395 - 38149444
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||| ||||||||||| | ||||||    
T  38149395 tttttaggttcattcatttaatgatgtatatagtttataatatggaccac 38149444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 38824330 - 38824371
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||    
T  38824330 ttcattcaattaatgatgtatgtggttcataatatagaccac 38824371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Complemental strand, 38824399 - 38824370
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgt 132  Q
    ||||||||||||||||||||||||||||||    
T  38824399 ttttagattcattcaattaatgatgtatgt 38824370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 39015672 - 39015623
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| | ||||||    
T  39015672 tttttaggttcattcaattaatgatgtatgtggttcataatattgaccac 39015623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 42761264 - 42761313
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  42761264 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 42761313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 44673994 - 44673946
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||||| |||||| |||||||||||| || ||||||||    
T  44673994 tttttagattcattcaat-aatgatatatgtagtttattatatagaccac 44673946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 45239022 - 45239071
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||| ||| |||||||||||| ||| ||||| ||||||||    
T  45239022 tttttagattcatttaatcaatgatgtatgtggttcataatatagaccac 45239071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 45925353 - 45925304
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  45925353 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 45925304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 47011353 - 47011304
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||||||||||||||||||  |||||||| | ||||||    
T  47011353 tttttaggttcattcaattaatgatgtatgtgatttataatatggaccac 47011304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 7230070 - 7230098
Alignment:
Q  104 tttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||    
T  7230070 tttagattcattcaattaatgatgtatgt 7230098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 9135627 - 9135587
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||| |||||||||||||| ||| |||||    
T  9135627 tttttagattcattcatttaatgatgtatgtggttcataat 9135587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 9947863 - 9947823
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||| |||||||||||||| ||| |||||    
T  9947863 tttttagattcattcatttaatgatgtatgtggttcataat 9947823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 17988253 - 17988293
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  17988253 tttttaggttcattcaattaatgatgtatgtggttcataat 17988293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 23392646 - 23392606
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||| ||||| |||||||||| |||||||||    
T  23392646 tttttagattcatttaattattgatgtatgtggtttataat 23392606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 23394798 - 23394750
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||| |||  |||||||||||  |||||||||||||||||    
T  23394798 ttttagattcatttaatagatgatgtatgtgatttataatgtagaccac 23394750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 26453089 - 26453061
Alignment:
Q  102 tttttagattcattcaattaatgatgtat 130  Q
    |||||||||||||||||||||||||||||    
T  26453089 tttttagattcattcaattaatgatgtat 26453061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 31327591 - 31327647
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||| ||||||||| |||||||| |||||||||||| | ||| ||||| ||||||||    
T  31327591 aattcagtttttaggttcattcatttaatgatgtatatggttcataatatagaccac 31327647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 34598971 - 34598943
Alignment:
Q  102 tttttagattcattcaattaatgatgtat 130  Q
    |||||||||||||||||||||||||||||    
T  34598971 tttttagattcattcaattaatgatgtat 34598943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 37215203 - 37215243
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||| |||||||||||||| ||| |||||    
T  37215203 tttttagattcattcatttaatgatgtatgtggttcataat 37215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 39181160 - 39181120
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  39181160 tttttaggttcattcaattaatgatgtatgtggttcataat 39181120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 40341762 - 40341794
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagt 135  Q
    |||||| ||||||||||||||||||||||||||    
T  40341762 ttttaggttcattcaattaatgatgtatgtagt 40341794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 42788437 - 42788397
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||| |||||||||||||| ||| |||||    
T  42788437 tttttagattcattcatttaatgatgtatgtggttcataat 42788397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 43384591 - 43384543
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||| ||| |||||||| ||||||| | ||||||||    
T  43384591 ttttagattcattcaatcaattatgtatgtggtttatattatagaccac 43384543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 46590948 - 46590908
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||| ||||||| |||||||||    
T  46590948 tttttaggttcattcaattaatgttgtatgtggtttataat 46590908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 52253569 - 52253609
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||| ||||||||||||||||||||||||  ||||||||    
T  52253569 tttttatattcattcaattaatgatgtatgtgatttataat 52253609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 5496 - 5448
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  5496 ttttagattcatttaattaatgatgtatgtggtttataatatagaccac 5448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 14142 - 14094
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagacca 150  Q
    ||||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  14142 tttttaggttcattcaattaatgatctatgtagtttataatatagacca 14094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Original strand, 14064 - 14092
Alignment:
Q  102 tttttagattcattcaattaatgatgtat 130  Q
    |||||||||||||||||||||||||||||    
T  14064 tttttagattcattcaattaatgatgtat 14092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 10203 - 10148
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgtagtttataatgtagacca 150  Q
    |||||| |||||||||||||||| |||||||||||||| ||| ||||| |||||||    
T  10203 aattaattttttagattcattcatttaatgatgtatgtggttcataatatagacca 10148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 17940 - 17885
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgtagtttataatgtagacca 150  Q
    |||||| |||||||||||||||| |||||||||||||| ||| ||||| |||||||    
T  17940 aattaattttttagattcattcatttaatgatgtatgtggttcataatatagacca 17885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 26770745 - 26770791
Alignment:
Q  105 ttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  26770745 ttaggttcattcaattaatgatgtatgtggtttataatatagaccac 26770791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 16127857 - 16127808
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  16127857 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 16127808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 51256598 - 51256647
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  51256598 tttttaggttcattcaattaatgatgtatgttgtttataatatggaccac 51256647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 22528960 - 22528912
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||| |||||||||||| ||||||| | ||||||||    
T  22528960 ttttagattcattcaatcaatgatgtatgtggtttatattatagaccac 22528912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 40326547 - 40326507
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  40326547 tttttaggttcattcaattaatgatgtatgtggtttataat 40326507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 48906151 - 48906198
Alignment:
Q  95 aattaagtttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||| |||| |||||||| |||||||||||||| |||||||||    
T  48906151 aattaagttgttaggttcattcatttaatgatgtatgtggtttataat 48906198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 7672724 - 7672770
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagac 148  Q
    ||||||||||||||||||||||||| ||| ||||| ||||| |||||    
T  7672724 tttttagattcattcaattaatgatatatctagttcataatatagac 7672770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 7672802 - 7672764
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttata 140  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  7672802 tttttagattcattcaattaatgatttatgtagtctata 7672764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 29076634 - 29076604
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  29076634 tttttagattcattcaattaatgatgtatgt 29076604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 32589346 - 32589376
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  32589346 tttttagattcattcaattaatgatgtatgt 32589376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 42595846 - 42595816
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  42595846 tttttagattcattcaattaatgatgtatgt 42595816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 3972500 - 3972529
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgt 132  Q
    ||||||||||||||||||||||||||||||    
T  3972500 ttttagattcattcaattaatgatgtatgt 3972529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Complemental strand, 3994594 - 3994565
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgt 132  Q
    ||||||||||||||||||||||||||||||    
T  3994594 ttttagattcattcaattaatgatgtatgt 3994565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Complemental strand, 3997378 - 3997349
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgt 132  Q
    ||||||||||||||||||||||||||||||    
T  3997378 ttttagattcattcaattaatgatgtatgt 3997349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 13927504 - 13927455
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  13927504 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 13927455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 25990758 - 25990709
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  25990758 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 25990709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 26770830 - 26770793
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttat 139  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  26770830 tttttaggttcattcaattaatgatgtatgtggtttat 26770793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 32833719 - 32833760
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||||||| ||||| | ||||||    
T  32833719 ttcattcaattaatgatgtatgtagttcataatatggaccac 32833760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 44435205 - 44435254
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| | ||||||    
T  44435205 tttttaggttcattcaattaatgatgtatgtggttcataatatggaccac 44435254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 44544189 - 44544226
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttat 139  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  44544189 tttttaggttcattcaattaatgatgtatgtggtttat 44544226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 45819559 - 45819596
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttat 139  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  45819559 tttttagattcattcaataaatgatgtatgtggtttat 45819596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Complemental strand, 52638141 - 52638112
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgt 132  Q
    ||||||||||||||||||||||||||||||    
T  52638141 ttttagattcattcaattaatgatgtatgt 52638112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 54680598 - 54680565
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||||| ||||||||||||||||||||||||||    
T  54680598 tttttaggttcattcaattaatgatgtatgtagt 54680565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 55198641 - 55198690
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||| |||||||||||||| ||| ||||| | ||||||    
T  55198641 tttttagattcattcatttaatgatgtatgttgttaataatatggaccac 55198690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 4980381 - 4980349
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagt 135  Q
    ||||||||||||||||| |||||||||||||||    
T  4980381 ttttagattcattcaataaatgatgtatgtagt 4980349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 5919465 - 5919513
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||| |||||||||||| ||||| |||  |||||||    
T  5919465 ttttagattcattcaataaatgatgtatgttgtttacaataaagaccac 5919513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 8126239 - 8126199
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||| ||||| |||||||||    
T  8126239 tttttaggttcattcaattaatgatatatgtggtttataat 8126199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 11582780 - 11582820
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||| |||||||||||||| |||||||||    
T  11582780 tttttaggttcattcatttaatgatgtatgtggtttataat 11582820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 11582880 - 11582840
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||| |||||||||||||| |||||||||    
T  11582880 tttttaggttcattcatttaatgatgtatgtggtttataat 11582840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 14626737 - 14626697
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||| |||||||||||||||||||||||| ||| |||||    
T  14626737 tttttaaattcattcaattaatgatgtatgtggttcataat 14626697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 17005069 - 17005029
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| || ||||||    
T  17005069 tttttaggttcattcaattaatgatgtatgtggtctataat 17005029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 17501514 - 17501474
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||| ||||||||||||||||||||||||| || ||||||    
T  17501514 ttttttgattcattcaattaatgatgtatgtggtctataat 17501474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 21831497 - 21831537
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||||| |||||||||||||| |||||||||    
T  21831497 tttttaggttcattcatttaatgatgtatgtggtttataat 21831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 22995727 - 22995767
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| |||||| |||||||||||||||| |||||||||    
T  22995727 tttttaggttcatttaattaatgatgtatgtggtttataat 22995767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 24596923 - 24596967
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtaga 147  Q
    ||||||||||||||||| || |||||||||  |||||||||||||    
T  24596923 ttttagattcattcaataaacgatgtatgtgatttataatgtaga 24596967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 32827459 - 32827499
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  32827459 tttttaggttcattcaattaatgatgtatgtggttcataat 32827499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 43333951 - 43333983
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagt 135  Q
    |||||| ||||||||||||||||||||||||||    
T  43333951 ttttaggttcattcaattaatgatgtatgtagt 43333983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Original strand, 43898124 - 43898152
Alignment:
Q  102 tttttagattcattcaattaatgatgtat 130  Q
    |||||||||||||||||||||||||||||    
T  43898124 tttttagattcattcaattaatgatgtat 43898152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 54726163 - 54726115
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||| |||||||||| |||||  |||||||| ||||||||    
T  54726163 ttttagattcatttaattaatgatatatgtgatttataatatagaccac 54726115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 136
Target Start/End: Original strand, 54985556 - 54985588
Alignment:
Q  104 tttagattcattcaattaatgatgtatgtagtt 136  Q
    ||||| |||||||||||||||||||||||||||    
T  54985556 tttaggttcattcaattaatgatgtatgtagtt 54985588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 17543 - 17494
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||||||||| ||||||||    
T  17543 tttttaggttcattcatttaatgatgtatgtggtttataatatagaccac 17494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 288 - 239
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  288 tttttaggttcattcaattaatgatgtatgtggtttataatatggaccac 239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 7418906 - 7418955
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| ||||||||    
T  7418906 tttttaggttcattcaattaatgatgtatgtggttcataatatagaccac 7418955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 10731582 - 10731537
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtaga 147  Q
    ||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  10731582 tttttaggttcattcaattaatgatgtatgtggtttataatataga 10731537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 21478584 - 21478633
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||||||||||||||||| ||| ||| | ||||||||    
T  21478584 tttttagattcattcaattaatgatgtatgtggttcatattatagaccac 21478633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 31577548 - 31577508
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  31577548 tttttaggttcattcaattaatgatgtatgtagttcataat 31577508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 6047987 - 6048017
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  6047987 tttttagattcattcaattaatgatgtatgt 6048017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 6048065 - 6048035
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  6048065 tttttagattcattcaattaatgatgtatgt 6048035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 136
Target Start/End: Complemental strand, 17181400 - 17181366
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtt 136  Q
    ||||||||||||||||||||||| |||||||||||    
T  17181400 tttttagattcattcaattaatgttgtatgtagtt 17181366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 17854867 - 17854897
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  17854867 tttttagattcattcaattaatgatgtatgt 17854897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 136
Target Start/End: Original strand, 19687498 - 19687532
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtt 136  Q
    ||||||| |||||||||||||||||||||||||||    
T  19687498 tttttaggttcattcaattaatgatgtatgtagtt 19687532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 14173421 - 14173470
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||||| ||||| ||||||||| |||||| | ||||||    
T  14173421 tttttagattcattcaataaatgaagtatgtagtctataatattgaccac 14173470  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 14177957 - 14178006
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||||||||||||||| ||||| ||||||||| |||||| | ||||||    
T  14177957 tttttagattcattcaataaatgaagtatgtagtctataatattgaccac 14178006  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 15467682 - 15467637
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtaga 147  Q
    |||| ||||||||||||||||||||||||||  |||||||| ||||    
T  15467682 ttttcagattcattcaattaatgatgtatgtgatttataatataga 15467637  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 19687576 - 19687539
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttat 139  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  19687576 tttttaggttcattcaattaatgatgtatgtggtttat 19687539  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 30507108 - 30507059
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  30507108 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 30507059  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 1302779 - 1302827
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    |||||| |||||||||| |||| ||||||| |||||| |||||||||||    
T  1302779 ttttagtttcattcaataaatgttgtatgtggtttatgatgtagaccac 1302827  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 3012468 - 3012420
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||| |||||||||||| ||||| |||  |||||||    
T  3012468 ttttagattcattcaataaatgatgtatgttgtttacaataaagaccac 3012420  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 3750310 - 3750270
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||| |||||||||||||| ||| |||||    
T  3750310 tttttagattcattcatttaatgatgtatgtggttcataat 3750270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 10258413 - 10258385
Alignment:
Q  102 tttttagattcattcaattaatgatgtat 130  Q
    |||||||||||||||||||||||||||||    
T  10258413 tttttagattcattcaattaatgatgtat 10258385  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 11400756 - 11400792
Alignment:
Q  115 tcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  11400756 tcaattaattatgtatgtagtttataatatagaccac 11400792  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 14804204 - 14804236
Alignment:
Q  110 ttcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||||||||||||| |||||||||    
T  14804204 ttcattcaattaatgatgtatgtggtttataat 14804236  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 26295405 - 26295445
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    ||||||||||||| ||||||||||||||||| ||| |||||    
T  26295405 tttttagattcatgcaattaatgatgtatgtggttcataat 26295445  T

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Target: scaffold0756 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 3550 - 3598
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||| |||||||||||| ||||||| | ||||||||    
T  3550 ttttagattcattcaatcaatgatgtatgtggtttatattatagaccac 3598  T

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Target: scaffold0542 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 3522 - 3474
Alignment:
Q  103 ttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||||||||||||| |||||||||||| ||||||| | ||||||||    
T  3522 ttttagattcattcaatcaatgatgtatgtggtttatattatagaccac 3474  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 13726 - 13756
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgt 132  Q
    |||||||||||||||||||||||||||||||    
T  13726 tttttagattcattcaattaatgatgtatgt 13756  T

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Target: scaffold0321 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 1664 - 1713
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  1664 tttttaggttcattcatttaatgatgtatgtggttcataatatagaccac 1713  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 11693 - 11644
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataatgtagaccac 151  Q
    ||||||| ||||||||||||||||||||||| || |||||| | ||||||    
T  11693 tttttaggttcattcaattaatgatgtatgtggtctataatatggaccac 11644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 541 - 581
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||| ||||| |||||||||| |||||||||    
T  541 tttttagattcatttaattattgatgtatgtggtttataat 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 239 - 199
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||||| |||||||||||| || ||||||    
T  239 tttttagattcattcaataaatgatgtatgtggtctataat 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 65951 - 65991
Alignment:
Q  102 tttttagattcattcaattaatgatgtatgtagtttataat 142  Q
    |||||||||||||||| |||||||||||||| ||| |||||    
T  65951 tttttagattcattcatttaatgatgtatgtggttcataat 65991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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