View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19007_low_1 (Length: 677)

Name: NF19007_low_1
Description: NF19007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19007_low_1
NF19007_low_1
[»] chr5 (28 HSPs)
chr5 (18-669)||(32874353-32875004)
chr5 (141-215)||(42861231-42861305)
chr5 (138-210)||(1538456-1538528)
chr5 (138-224)||(24653822-24653907)
chr5 (137-210)||(9805029-9805102)
chr5 (139-224)||(12081919-12082004)
chr5 (138-215)||(18294494-18294571)
chr5 (138-223)||(20682627-20682712)
chr5 (138-214)||(8513540-8513616)
chr5 (138-210)||(42086352-42086424)
chr5 (143-210)||(9168268-9168335)
chr5 (138-196)||(20525877-20525935)
chr5 (138-220)||(38897729-38897811)
chr5 (138-224)||(40117426-40117512)
chr5 (139-196)||(24875384-24875441)
chr5 (138-210)||(19572749-19572821)
chr5 (138-210)||(23383682-23383754)
chr5 (138-210)||(42291515-42291587)
chr5 (147-210)||(7336645-7336708)
chr5 (138-221)||(43399142-43399225)
chr5 (138-224)||(4016265-4016351)
chr5 (489-562)||(6641016-6641089)
chr5 (138-215)||(37263260-37263337)
chr5 (138-210)||(3653924-3653996)
chr5 (138-210)||(11845811-11845883)
chr5 (138-210)||(25417193-25417265)
chr5 (138-182)||(36783296-36783340)
chr5 (138-210)||(39099789-39099861)
[»] chr7 (29 HSPs)
chr7 (459-570)||(27153288-27153399)
chr7 (138-217)||(48804703-48804782)
chr7 (138-224)||(37514934-37515020)
chr7 (138-210)||(21530775-21530847)
chr7 (138-210)||(39474967-39475039)
chr7 (139-223)||(41945488-41945571)
chr7 (138-224)||(34659239-34659325)
chr7 (138-211)||(42210272-42210345)
chr7 (138-210)||(10047886-10047958)
chr7 (138-210)||(17748392-17748464)
chr7 (138-210)||(28396170-28396242)
chr7 (138-210)||(38578877-38578949)
chr7 (139-196)||(3603398-3603455)
chr7 (138-202)||(4195212-4195276)
chr7 (138-210)||(5069825-5069897)
chr7 (144-196)||(24983435-24983487)
chr7 (138-210)||(28744189-28744261)
chr7 (145-196)||(22573853-22573904)
chr7 (139-210)||(47341903-47341974)
chr7 (138-224)||(23658192-23658278)
chr7 (138-196)||(29151981-29152039)
chr7 (138-215)||(3353446-3353523)
chr7 (138-210)||(8734696-8734768)
chr7 (138-210)||(13095885-13095957)
chr7 (184-224)||(14537879-14537919)
chr7 (138-210)||(16802150-16802222)
chr7 (138-210)||(29805450-29805522)
chr7 (144-196)||(36619270-36619322)
chr7 (138-210)||(42032123-42032195)
[»] chr2 (43 HSPs)
chr2 (459-565)||(14653674-14653780)
chr2 (138-224)||(37560183-37560269)
chr2 (138-210)||(11069902-11069974)
chr2 (138-210)||(25540414-25540486)
chr2 (138-224)||(12455320-12455406)
chr2 (138-215)||(35946757-35946834)
chr2 (138-210)||(42770661-42770733)
chr2 (463-562)||(16322497-16322596)
chr2 (138-224)||(6358161-6358247)
chr2 (138-224)||(12864234-12864320)
chr2 (138-224)||(34356216-34356302)
chr2 (138-281)||(10046487-10046641)
chr2 (465-569)||(177549-177653)
chr2 (468-568)||(573245-573345)
chr2 (138-210)||(10669616-10669688)
chr2 (138-210)||(10823084-10823156)
chr2 (138-210)||(41220659-41220731)
chr2 (138-210)||(44139508-44139580)
chr2 (138-210)||(44945617-44945689)
chr2 (138-213)||(9360758-9360833)
chr2 (138-224)||(10026626-10026712)
chr2 (146-224)||(29653637-29653714)
chr2 (138-224)||(38962773-38962859)
chr2 (161-222)||(18846254-18846315)
chr2 (484-565)||(42403214-42403295)
chr2 (138-210)||(3643897-3643969)
chr2 (468-568)||(3779042-3779142)
chr2 (138-210)||(16325619-16325691)
chr2 (140-196)||(22593172-22593228)
chr2 (138-210)||(27725964-27726036)
chr2 (138-214)||(28525465-28525541)
chr2 (139-191)||(29422258-29422310)
chr2 (138-217)||(38005419-38005498)
chr2 (143-210)||(45263682-45263749)
chr2 (138-196)||(14169619-14169677)
chr2 (138-210)||(20612544-20612617)
chr2 (459-512)||(26791365-26791418)
chr2 (138-210)||(8410155-8410227)
chr2 (468-548)||(19265469-19265549)
chr2 (138-194)||(21641990-21642046)
chr2 (468-568)||(35135213-35135313)
chr2 (468-568)||(40328231-40328331)
chr2 (138-210)||(41031916-41031988)
[»] chr3 (43 HSPs)
chr3 (459-565)||(11897195-11897301)
chr3 (138-217)||(47219161-47219240)
chr3 (459-565)||(26432692-26432798)
chr3 (138-215)||(15795505-15795582)
chr3 (138-215)||(47471850-47471927)
chr3 (138-214)||(50405614-50405690)
chr3 (138-224)||(2029278-2029364)
chr3 (138-196)||(49021214-49021272)
chr3 (138-224)||(49543529-49543615)
chr3 (138-224)||(51060292-51060378)
chr3 (139-216)||(8164571-8164648)
chr3 (138-215)||(47749116-47749193)
chr3 (138-210)||(22909807-22909879)
chr3 (138-214)||(25294980-25295056)
chr3 (138-214)||(28572222-28572298)
chr3 (138-210)||(29127943-29128015)
chr3 (468-562)||(15473446-15473540)
chr3 (138-224)||(29762166-29762252)
chr3 (138-224)||(30767258-30767344)
chr3 (138-224)||(31072888-31072974)
chr3 (138-220)||(35998582-35998664)
chr3 (138-212)||(37319900-37319974)
chr3 (138-224)||(45877464-45877550)
chr3 (138-224)||(54237458-54237544)
chr3 (138-215)||(10040575-10040652)
chr3 (138-210)||(3507544-3507616)
chr3 (138-210)||(29135937-29136009)
chr3 (138-210)||(49198375-49198447)
chr3 (138-210)||(54261250-54261322)
chr3 (138-210)||(55069690-55069762)
chr3 (138-217)||(26361978-26362057)
chr3 (138-212)||(4638176-4638250)
chr3 (143-221)||(7648753-7648831)
chr3 (138-224)||(19146971-19147057)
chr3 (144-214)||(43330749-43330819)
chr3 (140-210)||(52364813-52364883)
chr3 (138-223)||(13893937-13894022)
chr3 (137-210)||(48342044-48342117)
chr3 (138-186)||(22405554-22405602)
chr3 (139-175)||(24146340-24146376)
chr3 (138-241)||(24506659-24506762)
chr3 (138-182)||(36043685-36043729)
chr3 (138-210)||(51682965-51683037)
[»] chr8 (18 HSPs)
chr8 (459-565)||(23132579-23132685)
chr8 (138-210)||(23895596-23895668)
chr8 (138-224)||(8141116-8141202)
chr8 (138-207)||(3692864-3692933)
chr8 (138-215)||(4479306-4479383)
chr8 (138-215)||(15884566-15884643)
chr8 (459-568)||(38348514-38348623)
chr8 (138-210)||(6940586-6940657)
chr8 (138-210)||(10927634-10927706)
chr8 (462-526)||(26587274-26587338)
chr8 (138-214)||(34710577-34710653)
chr8 (138-210)||(43032929-43033001)
chr8 (138-197)||(8803095-8803154)
chr8 (138-196)||(3567946-3568004)
chr8 (138-191)||(68108-68161)
chr8 (144-217)||(6042842-6042915)
chr8 (138-210)||(18374038-18374110)
chr8 (138-210)||(44893288-44893360)
[»] chr4 (33 HSPs)
chr4 (138-224)||(38075448-38075534)
chr4 (138-224)||(40780871-40780957)
chr4 (139-214)||(29588761-29588836)
chr4 (139-217)||(49260676-49260754)
chr4 (138-223)||(5472858-5472943)
chr4 (138-210)||(2559336-2559408)
chr4 (459-562)||(14307827-14307930)
chr4 (138-224)||(20128324-20128410)
chr4 (138-210)||(3159479-3159551)
chr4 (138-210)||(3507299-3507371)
chr4 (138-210)||(7246656-7246728)
chr4 (459-523)||(14291778-14291842)
chr4 (138-210)||(29895816-29895888)
chr4 (138-210)||(30317262-30317334)
chr4 (138-210)||(38166056-38166128)
chr4 (138-210)||(47078487-47078559)
chr4 (138-224)||(20421788-20421874)
chr4 (138-210)||(4738647-4738719)
chr4 (138-210)||(8889051-8889123)
chr4 (138-210)||(55921063-55921135)
chr4 (138-210)||(1940787-1940856)
chr4 (138-224)||(10541031-10541116)
chr4 (138-224)||(26237432-26237518)
chr4 (138-224)||(40272341-40272427)
chr4 (138-224)||(48317285-48317371)
chr4 (138-192)||(50485990-50486044)
chr4 (138-210)||(16450329-16450401)
chr4 (138-210)||(20354666-20354738)
chr4 (531-567)||(24133240-24133276)
chr4 (138-214)||(36145225-36145301)
chr4 (138-210)||(36262777-36262849)
chr4 (138-210)||(42722587-42722659)
chr4 (138-202)||(54946286-54946350)
[»] chr6 (24 HSPs)
chr6 (138-214)||(12635838-12635914)
chr6 (138-224)||(3601098-3601184)
chr6 (138-210)||(9633635-9633707)
chr6 (459-570)||(27852947-27853058)
chr6 (138-224)||(13036014-13036100)
chr6 (138-210)||(5253233-5253305)
chr6 (138-202)||(14783430-14783494)
chr6 (145-224)||(19230576-19230654)
chr6 (138-224)||(6606107-6606193)
chr6 (138-224)||(8888896-8888982)
chr6 (459-568)||(12645975-12646084)
chr6 (138-210)||(8932689-8932761)
chr6 (138-210)||(8944155-8944227)
chr6 (138-210)||(13468961-13469033)
chr6 (138-210)||(19089526-19089598)
chr6 (138-210)||(21898676-21898748)
chr6 (138-210)||(29444775-29444847)
chr6 (138-210)||(30788863-30788935)
chr6 (138-224)||(34954629-34954715)
chr6 (138-175)||(13584456-13584493)
chr6 (468-565)||(24893836-24893933)
chr6 (138-210)||(2271313-2271385)
chr6 (138-182)||(8938767-8938811)
chr6 (148-224)||(12606444-12606520)
[»] chr1 (37 HSPs)
chr1 (138-210)||(26325837-26325909)
chr1 (138-224)||(14254279-14254365)
chr1 (459-568)||(1525014-1525123)
chr1 (138-210)||(8764016-8764088)
chr1 (138-210)||(17642015-17642087)
chr1 (138-210)||(41663867-41663939)
chr1 (138-224)||(5504042-5504128)
chr1 (138-224)||(32142857-32142943)
chr1 (138-215)||(21849216-21849293)
chr1 (138-210)||(10507723-10507795)
chr1 (139-210)||(12036756-12036827)
chr1 (138-209)||(26258721-26258792)
chr1 (138-209)||(33418126-33418197)
chr1 (138-196)||(4581693-4581751)
chr1 (138-224)||(10336527-10336613)
chr1 (459-565)||(20284896-20285002)
chr1 (138-224)||(33004026-33004112)
chr1 (138-224)||(42710149-42710235)
chr1 (139-224)||(48761187-48761272)
chr1 (138-210)||(10172982-10173054)
chr1 (154-214)||(31734309-31734369)
chr1 (138-210)||(43959832-43959904)
chr1 (137-224)||(12744533-12744620)
chr1 (137-224)||(12755523-12755610)
chr1 (149-224)||(17092499-17092574)
chr1 (138-209)||(37339846-37339917)
chr1 (138-196)||(14357794-14357852)
chr1 (138-224)||(32150933-32151019)
chr1 (138-192)||(35211183-35211237)
chr1 (138-196)||(50503372-50503430)
chr1 (138-202)||(35908791-35908853)
chr1 (157-214)||(38791640-38791697)
chr1 (459-512)||(50236615-50236668)
chr1 (138-210)||(32896-32968)
chr1 (138-210)||(5855547-5855619)
chr1 (138-210)||(18915892-18915964)
chr1 (138-210)||(44969689-44969761)
[»] scaffold0170 (1 HSPs)
scaffold0170 (138-224)||(9858-9944)
[»] scaffold0010 (1 HSPs)
scaffold0010 (140-210)||(155723-155793)
[»] scaffold0384 (1 HSPs)
scaffold0384 (138-209)||(6000-6071)
[»] scaffold0086 (1 HSPs)
scaffold0086 (138-224)||(26196-26282)
[»] scaffold0029 (1 HSPs)
scaffold0029 (138-224)||(41057-41143)
[»] scaffold0011 (1 HSPs)
scaffold0011 (138-196)||(224358-224416)
[»] scaffold0016 (1 HSPs)
scaffold0016 (138-210)||(8711-8783)
[»] scaffold0009 (1 HSPs)
scaffold0009 (138-210)||(42842-42914)
[»] scaffold0002 (2 HSPs)
scaffold0002 (227-279)||(319369-319421)
scaffold0002 (138-210)||(319449-319521)
[»] scaffold0006 (1 HSPs)
scaffold0006 (138-210)||(68544-68613)
[»] scaffold0214 (1 HSPs)
scaffold0214 (459-512)||(9011-9064)
[»] scaffold0036 (1 HSPs)
scaffold0036 (475-568)||(75967-76060)
[»] scaffold0291 (1 HSPs)
scaffold0291 (138-210)||(6882-6954)
[»] scaffold0223 (1 HSPs)
scaffold0223 (138-214)||(16902-16978)
[»] scaffold0155 (1 HSPs)
scaffold0155 (138-210)||(19282-19354)


Alignment Details
Target: chr5 (Bit Score: 596; Significance: 0; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 596; E-Value: 0
Query Start/End: Original strand, 18 - 669
Target Start/End: Complemental strand, 32875004 - 32874353
Alignment:
Q  18 agtgtaacaatgtttttatatcgaagtaaagttatttgaacattcaaataaaattactctttaacaacaattcactagagaataaacaaccattatttct 117  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32875004 agtgtaacaatgtttttatatcgaaataaagttatttgaacattcaaataaaattactctttaacaacaattcactagagaataaacaaccattatttct 32874905  T
Q  118 cactattaacaaccggtaatgtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttg 217  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  32874904 cactattaacaatcggtaatgtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactagtcaagcgttgttccccttg 32874805  T
Q  218 aaaatcgttccggatacgttcttggaagaagcttcttgtcattggagcctagcaacttggttactgataatgttatttgaaagtacaaaaatcaatgtat 317  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32874804 aaaatcgttccggatacgtctttggaagaagcttcttgtcactggagcccagcaacttggttactgataatgttatttgaaagtacaaaaatcaatgtgt 32874705  T
Q  318 ttgacgacggacaaaatgcatcatttataactattgatattcattaacaagaaaaaactaattctatgactaagggggcgagagttagggaataatacat 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32874704 ttgacgacggacaaaatgcatcatttataactattgatattcattaacaagaaaaaactaattctatgactaagggggcgagagttagggaataatacat 32874605  T
Q  418 atatctcatttaatacatgtcattaattatttccatcactatctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgcca 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32874604 atatctcatttaatacatgtcattaattatttccatcactatctatcctttgaaatgggaacaagttgcctcctttcaagccttctcatggcctccgcca 32874505  T
Q  518 aggagacccgctctctccctatttattcatcatttgcatggaaaagctctccacaactatcaacagcgccgttcagggaggttcttgggatctcatccaa 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32874504 aggagacccgctctctccctatttattcatcatttgcatggaaaagctctccacaactatcaacagcgccgttcaggcaggttcttgggatctcatccaa 32874405  T
Q  618 atctctgctaacggacctcatatatctcaccttctctttgcagatgatgtcc 669  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  32874404 atctctgctaacagacctcatatatctcaccttctctttgcatatgatgtcc 32874353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 42861231 - 42861305
Alignment:
Q  141 tccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||  ||||| |||||||||||    
T  42861231 tccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccct 42861305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 1538528 - 1538456
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||  ||||| ||||||    
T  1538528 gtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 1538456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 24653822 - 24653907
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||| |||||||||||||||||||||||||| |||||  |||||| ||||||||||||| |||||| ||||||  || |||||||||    
T  24653822 gttttcgacccaccaatggtggacgattaatccggct-atgcgtagaggtatgcgcactgaccaagtgttgttctccctgaaaatcg 24653907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 9805102 - 9805029
Alignment:
Q  137 tgtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||||||| ||||||||| |||| |||||| |||||| ||| |||||||||  ||||||||||||    
T  9805102 tgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 9805029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 12082004 - 12081919
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||| |||||| ||||||||| |||||||||||||||||| | | |||||||||  |||||||||||| ||| ||| |||||    
T  12082004 tttccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcg 12081919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 18294494 - 18294571
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    |||||||||||||||| | ||| |||||||| ||| || || ||| ||||||||||||| ||||||||||||| ||||    
T  18294494 gtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactgaccaagcgttgttcccct 18294571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 20682627 - 20682712
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatc 223  Q
    |||||| |||||| || ||||| |||||||| ||||||||||||| ||| |||||||||  |||||||||||| ||| || |||||    
T  20682627 gtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatc 20682712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 8513616 - 8513540
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    |||||||||||||||| ||||||||| ||||  |||||||||||| ||| ||| |||||  |||||| |||||||||    
T  8513616 gtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttccc 8513540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 42086424 - 42086352
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||||||| |||| |||||| |||||| ||| |||||||||   |||||||||||    
T  42086424 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgtt 42086352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 9168268 - 9168335
Alignment:
Q  143 cgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||| || ||||||||| |||| |||||| |||||| |||||||||||||  ||||||||||||    
T  9168268 cgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgtt 9168335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 20525935 - 20525877
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||| ||||||||||||||||| |||| |||||| |||||| ||| |||||||||    
T  20525935 gtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 20525877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 38897729 - 38897811
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaa 220  Q
    |||||||| ||||||| ||||| | | |||| ||||||||||||| ||| |||||||||  |||||||||||| |||| ||||    
T  38897729 gtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctggaaa 38897811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 40117512 - 40117426
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||| ||| ||||||| |||| ||||||||| |||||| |||||| ||| |||||||||  |||||||||||| ||| || ||||||    
T  40117512 gttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcg 40117426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 24875441 - 24875384
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||| ||  |||||||||    
T  24875441 tttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcact 24875384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 19572821 - 19572749
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||| |||||||||||||| |||| |||| |||||| |||||| ||| |||||||||  ||||| ||||||    
T  19572821 gtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 19572749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 23383754 - 23383682
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||||||| |||| | |||| |||||| ||| | |||||||  ||||||||||||    
T  23383754 gtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgtt 23383682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 42291515 - 42291587
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||| ||| ||| ||||||||| |||| ||||||||||||| ||| ||| |||||  ||||||||||||    
T  42291515 gtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgtt 42291587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 7336708 - 7336645
Alignment:
Q  147 ccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||| ||| |||||||||| ||||||||||||| ||| ||||||||| |  ||||||||||    
T  7336708 ccaccaaaggtagacgattaatccggctcgtgcgtagaggcatgcgcactgataaagcgttgtt 7336645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 221
Target Start/End: Complemental strand, 43399225 - 43399142
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaa 221  Q
    |||||||||| |||||  |||||||| |||| | ||||||||||| ||| |||||||||  ||||||||| || ||| ||||||    
T  43399225 gtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttattccccctgaaaa 43399142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 4016265 - 4016351
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||||||||  | | |||| ||||||||| ||| ||| |||||||||  ||||| |||||| ||| ||| |||||    
T  4016265 gtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccctgataatcg 4016351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 6641089 - 6641016
Alignment:
Q  489 cctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatggaaaa 562  Q
    |||||||||||  |||||||||||||  |||| || ||||||||||||||  | ||||| || |||||||||||    
T  6641089 cctttcaagcccactcatggcctccgaaaaggtgatccgctctctccctacctcttcattatgtgcatggaaaa 6641016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 37263337 - 37263260
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    |||||||| |||  || ||||||||| |||| ||||||||||||| ||| ||||||| |  |||||||||||| ||||    
T  37263337 gtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttcccct 37263260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 3653924 - 3653996
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||| ||| ||||||| ||||||||| |||| || |||||||||| ||| |||||||||   |||||||||||    
T  3653924 gttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgtt 3653996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 11845811 - 11845883
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||| ||||| ||| ||||| ||||||||||||||| | |||| ||| |||||||||  |||| |||||||    
T  11845811 gtttccaacccatcaaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgtt 11845883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 25417193 - 25417265
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||| ||||||||||||||  | || |||| |||||||| |||| ||| |||||||||  ||||||||||||    
T  25417193 gtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgtt 25417265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 36783340 - 36783296
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgta 182  Q
    |||||| ||||||||||||||||||| |||| |||||| ||||||    
T  36783340 gtttccaacccaccaatggtggacgactaatccggctcatgcgta 36783296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 39099789 - 39099861
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| |||| |||||| |||||| ||| ||| |||||  ||||| ||||||    
T  39099789 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtt 39099861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 459 - 570
Target Start/End: Original strand, 27153288 - 27153399
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg 558  Q
    |||||||| ||||||||||| ||| | |||||||||||||||| ||||||||| || ||||||||||  ||||||||||||||||| ||| |||| ||||    
T  27153288 tctatcctatggaatgggaataagattcctcctttcaagccttatcatggccttcggcaaggagaccatctctctccctatttatttatcctttgtatgg 27153387  T
Q  559 aaaagctctcca 570  Q
    ||||||||||||    
T  27153388 aaaagctctcca 27153399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 48804782 - 48804703
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttg 217  Q
    |||||||||||||||||||||||||| |||| |||||| |||||| ||| |||||||||  ||||| |||||| ||||||    
T  48804782 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttg 48804703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 37515020 - 37514934
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||| ||  ||||||||| ||||| ||||||| ||  |||||||||    
T  37515020 gtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcg 37514934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 21530847 - 21530775
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||  |||||||||||||||||||||| ||| ||| ||||| |||||| ||||||    
T  21530847 gtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgtt 21530775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 39475039 - 39474967
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||| |||||||| || ||||||||| |||| |||||| |||||| ||||||||||||| |||||||||||||    
T  39475039 gttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgtt 39474967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 41945571 - 41945488
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatc 223  Q
    |||||||| |||||| ||||||||| |||| ||||||||||||| ||| |||||||||  |||||||||  ||||||||||||||    
T  41945571 tttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt-attcccttgaaaatc 41945488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 34659325 - 34659239
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||| |||| |||||||||||| ||| |||| ||||||||||||| ||| |||||||||   ||||||||||| ||||||| |||||    
T  34659325 gttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcg 34659239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 42210272 - 42210345
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgttt 211  Q
    |||||||||||||||| |||||  ||||||| ||||||||||||| ||| |||||||||  |||| ||||||||    
T  42210272 gtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttt 42210345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 10047886 - 10047958
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||||||||||||| |||||| |||| |||||| |||  ||||||||  ||||| ||||||    
T  10047886 gtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgtt 10047958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 17748392 - 17748464
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||| ||| ||||||||| |||| |||||||| |||| ||| |||||||||  ||||||||||||    
T  17748392 gtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgtt 17748464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 28396170 - 28396242
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||| ||||| |||| |||||| |||||||||| |||||||| | | ||||||||||    
T  28396170 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcaccagctaagcgttgtt 28396242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 38578877 - 38578949
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| |||| |||||| |||||| ||| |||||||||  ||||||||||||    
T  38578877 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 38578949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 3603455 - 3603398
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||||||||||  ||| ||||||||| ||||||||||||| ||| |||||||||    
T  3603455 tttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcact 3603398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 4195212 - 4195276
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaa 202  Q
    |||||| ||||||||||||||||||  |||| |||||| |||||| ||| |||||||||| ||||    
T  4195212 gtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaa 4195276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 5069825 - 5069897
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| |||| ||||| ||||||| ||| |||| ||||| | ||||||||||    
T  5069825 gtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgtt 5069897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 24983435 - 24983487
Alignment:
Q  144 gacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||||||||||||||| |||| |||||| |||||| ||| |||||||||    
T  24983435 gacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 24983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 28744261 - 28744189
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||||||| |||| ||||||||  ||| ||||||||| |||  |||||| |||||    
T  28744261 gtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaagcattgtt 28744189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 22573904 - 22573853
Alignment:
Q  145 acccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    ||||| ||||| |||||||||||| |||||| |||||||||| |||||||||    
T  22573904 acccatcaatgatggacgattaatccggctcatgcgtaaaggcatgcgcact 22573853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 47341974 - 47341903
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||||||| ||||  ||| | ||||||||||| ||| |||||||||  ||||| ||||||    
T  47341974 tttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgtt 47341903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 23658278 - 23658192
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||| |||||||||| | ||||||| |||| ||||||||| ||| ||| |||| ||||  |||||||||||| ||| || ||||||    
T  23658278 gtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcg 23658192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 29152039 - 29151981
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||||||| ||||||| |||||||||| ||| ||||| ||| ||| |||||||||    
T  29152039 gtttccgacccatcaatggtagacgattaatccggatcgtgtgtagaggcatgcgcact 29151981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 3353523 - 3353446
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    ||||| || ||| ||| ||||||||| |||| ||||||||||||| ||| |||||||||  ||||  |||||||||||    
T  3353523 gtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtttccct 3353446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 8734696 - 8734768
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| ||||  |||||||||||  ||| |||||||||  |||||| |||||    
T  8734696 gtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgtt 8734768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 13095957 - 13095885
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||  ||| |||| |||||| |||||| ||| |||||||||  ||||| ||||||    
T  13095957 gtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 13095885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 14537919 - 14537879
Alignment:
Q  184 aggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||||||||||| ||||| |||| ||||||||||||||||    
T  14537919 aggtatgcgcactgaccaaacgttatttcccttgaaaatcg 14537879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 16802222 - 16802150
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||| ||||||||||||||||  ||| |||| ||||||||||||| ||| || ||||||  |||| |||||||    
T  16802222 gttttcgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgtt 16802150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 29805450 - 29805522
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||| ||| || ||| ||||||||||| ||||| |||||| ||  ||||||||| ||||| |||||||    
T  29805450 gtttccgactcactaaaggtagacgattaatttggctcatgcgtagagacatgcgcactgaccaaacgttgtt 29805522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 36619270 - 36619322
Alignment:
Q  144 gacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||||||||||||||| |||| |||||| |||||| ||| |||| ||||    
T  36619270 gacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacact 36619322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 42032195 - 42032123
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||| ||| ||||||| | ||||||||||| |||||| | ||||| |||||  |||| |||||||    
T  42032195 gtttccgacccatcaaaggtggacaactaattcggctcatgcgtagatgtatgtgcactggccaaacgttgtt 42032123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 459 - 565
Target Start/End: Complemental strand, 14653780 - 14653674
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg 558  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||| || ||| | || || ||||| |||||| |||||||||    
T  14653780 tctatactttggaatgggaacaagttgccgcctttcaagccttctcatggcctccaacaaggtgatccgttgtccccttattttttcatcctttgcatgg 14653681  T
Q  559 aaaagct 565  Q
    |||||||    
T  14653680 aaaagct 14653674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 37560269 - 37560183
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||| ||||||| ||| |||||||||||||| ||||||||||||| ||| ||||||||| ||||| ||||||| ||||||| |||||    
T  37560269 gttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcg 37560183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 11069974 - 11069902
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||||  |||| |||||||    
T  11069974 gtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgtt 11069902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 25540414 - 25540486
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||  ||||||||||||    
T  25540414 gtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 25540486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 12455406 - 12455320
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||||||||  ||| |||| ||||||||||||| ||| |||||||||  | |||||||||||||| || ||||||    
T  12455406 gtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcg 12455320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 35946834 - 35946757
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| ||| |||| || |  |||||||||||| ||||    
T  35946834 gtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgttcccct 35946757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 42770661 - 42770733
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||| ||||||||||| |||||||||||||| ||||||||||| | ||| |||||||||  ||||||||||||    
T  42770661 gttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgtt 42770733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 463 - 562
Target Start/End: Original strand, 16322497 - 16322596
Alignment:
Q  463 tcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatggaaaa 562  Q
    |||| |||||||| |||||| ||||||||||||||||  |||||||||| || ||||| |||||||| ||||| ||  | |||||  |||||||||||||    
T  16322497 tcctatggaatggaaacaagatgcctcctttcaagcccactcatggccttcgacaaggtgacccgctttctccgtaccttttcatactttgcatggaaaa 16322596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 6358161 - 6358247
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||| ||||||||||||||||||||| |||| |||||| |||||| ||| |||||||||  ||||| |||||| ||| || ||||||    
T  6358161 gttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcg 6358247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 12864320 - 12864234
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||||||||||||| ||||  ||||| |||| | ||| ||||||||| |||||| |||||| ||| || ||||||    
T  12864320 gtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcg 12864234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 34356302 - 34356216
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||| |||||||| ||||||||| |||||| ||| || ||| ||||||||| |||||| |||||| ||| || ||||||    
T  34356302 gtttccgacccatcaatggtgcacgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcg 34356216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 281
Target Start/End: Original strand, 10046487 - 10046641
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg-----------tt 226  Q
    |||||||||||||||| ||||| ||| |||| |||||| |||||| ||| |||||||||   ||| ||||||||||||||| |||||            |    
T  10046487 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcact-gtcaaacgttgtttcccttgagaatcgaacccggtattct 10046585  T
Q  227 ccggatacgttcttggaagaagcttcttgtcattggag-cctagcaacttggttac 281  Q
    ||||||||||||||||||| |||| |||| |||||||| || ||||||||||||||    
T  10046586 ccggatacgttcttggaaggagctccttgccattggagcccaagcaacttggttac 10046641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 569
Target Start/End: Original strand, 177549 - 177653
Alignment:
Q  465 ctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatggaaaagc 564  Q
    ||||||||||| ||||| | ||||||| |||||||| ||||||| ||  | ||||| |||||  | ||||| ||  |||||||||| |||||||||||||    
T  177549 ctttggaatggaaacaaatggcctcctatcaagcctactcatggtctaagacaaggtgaccctttgtctccttacctattcatcatctgcatggaaaagc 177648  T
Q  565 tctcc 569  Q
    |||||    
T  177649 tctcc 177653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 568
Target Start/End: Original strand, 573245 - 573345
Alignment:
Q  468 tggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatggaaaagctct 567  Q
    |||||||| |||||  ||| |||||| || ||||| ||||||||| | ||||| || ||||||||||| ||  |||||||| |||||||||| |||||||    
T  573245 tggaatggtaacaaaatgcatccttttaaaccttcccatggcctcagacaaggtgatccgctctctccttacctattcatcctttgcatggagaagctct 573344  T
Q  568 c 568  Q
    |    
T  573345 c 573345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 10669688 - 10669616
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| |||| ||||||||| || |||||||||| ||  |||||||||  ||||||||||||    
T  10669688 gtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgtt 10669616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 10823156 - 10823084
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||| || ||||| ||| |||| ||||||||||||| ||| |||||||||  ||||||||||||    
T  10823156 gtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 10823084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 41220731 - 41220659
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||| || |||| |||| ||||||||||| |||||| ||| |||||||||  ||||||||||||    
T  41220731 gtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtt 41220659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 44139580 - 44139508
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||||| |||||| ||| |||| ||||||||||||| ||| | |||||||  ||||||||||||    
T  44139580 gtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgtt 44139508  T

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Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 44945689 - 44945617
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||| |||| || ||||| ||| |||| ||||||||||||| ||| |||||||||| ||||||||||||    
T  44945689 gtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgtt 44945617  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 9360758 - 9360833
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcc 213  Q
    ||||||| ||||| || ||||| ||| |||||||||||||||||| ||| |||||||||  |||| ||||||||||    
T  9360758 gtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcc 9360833  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 10026626 - 10026712
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||| ||||| ||| |||| |||||| |||||| ||| |||||||||  |||| ||||||| ||| ||| |||||    
T  10026626 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcg 10026712  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 29653714 - 29653637
Alignment:
Q  146 cccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||| ||||| ||| |||||||||||||||||| ||| |||||||||  ||||||||||||| || || ||||||    
T  29653714 cccaccaaaggtgg-cgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcg 29653637  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 38962859 - 38962773
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||| |||||||||| ||||||||| |||| ||| || |||||| ||| |||||||||  |||||||||||| | | |||||||||    
T  38962859 gtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcg 38962773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 18846254 - 18846315
Alignment:
Q  161 cgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaat 222  Q
    ||||||||  ||||||| |||||||| |||||||||  |||||||||||||||| |||||||    
T  18846254 cgattaatctggctcgtacgtaaaggcatgcgcactgcccaagcgttgtttcccctgaaaat 18846315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 565
Target Start/End: Complemental strand, 42403295 - 42403214
Alignment:
Q  484 tgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatggaaaagct 565  Q
    ||||||||||||||||  ||||||||||||| ||||| ||||| ||||| || ||| |||| ||  | ||||||||||||||    
T  42403295 tgcctcctttcaagcccactcatggcctccggcaaggtgaccctctctcaccttatctatttatactgtgcatggaaaagct 42403214  T

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Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 3643897 - 3643969
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||| |||||||| ||||||||| |||| | |||| |||||| ||| |||||||||  ||||||||||||    
T  3643897 gtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgtt 3643969  T

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Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 568
Target Start/End: Complemental strand, 3779142 - 3779042
Alignment:
Q  468 tggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatggaaaagctct 567  Q
    |||||||| |||||| |  |||||||||||||| ||||||| || || ||||| |||||||| ||||| ||| | |||||| | || |||||||| ||||    
T  3779142 tggaatggaaacaagctctctcctttcaagcctactcatggacttcgtcaaggtgacccgctgtctccttatcttttcatcctctgtatggaaaaactct 3779043  T
Q  568 c 568  Q
    |    
T  3779042 c 3779042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 16325691 - 16325619
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||||||||||||| ||||  ||||| |||||| ||| |||| ||||  ||||| ||||||    
T  16325691 gtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgtt 16325619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 22593228 - 22593172
Alignment:
Q  140 ttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||||||||| ||||||||| |||| |||||| |||||| ||| |||||||||    
T  22593228 ttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcact 22593172  T

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Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 27726036 - 27725964
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||||| |||||| ||| |||| ||||| ||||||| ||| |||||||||  |||||| |||||    
T  27726036 gtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgtt 27725964  T

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Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 28525465 - 28525541
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    ||||||||||||  || |||||| || |||| ||||||||||||| ||| |||||||||  ||||| ||||||||||    
T  28525465 gtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtttccc 28525541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 29422310 - 29422258
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgc 191  Q
    ||||||| ||| ||| ||||||||| |||| ||||||||||||||||||||||    
T  29422310 tttccgatccatcaaaggtggacgactaatccggctcgtgcgtaaaggtatgc 29422258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 38005498 - 38005419
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttg 217  Q
    |||||||| ||||||| ||||| ||| |||| |||||| || ||| ||| |||||||||  |||||||||||| ||||||    
T  38005498 gtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttg 38005419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 45263682 - 45263749
Alignment:
Q  143 cgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||| | ||  |||||||| ||||||||||||| ||| |||||||||  ||||||||||||    
T  45263682 cgacccaccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 45263749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 14169619 - 14169677
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||||||||||||||| ||||| |||| |||||| |||||| ||  |||||||||    
T  14169619 gtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcact 14169677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 20612544 - 20612617
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaat-tcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||||||||||||| ||||  |||||| ||| || ||| |||||||||  ||||| ||||||    
T  20612544 gtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgtt 20612617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 512
Target Start/End: Original strand, 26791365 - 26791418
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctc 512  Q
    ||||| ||||||||||| || | ||||||||||||| ||||| |||||||||||    
T  26791365 tctattctttggaatggaaataggttgcctcctttcgagcctactcatggcctc 26791418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 8410227 - 8410155
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||| ||||  |||| ||| |||| ||||||||||||| ||| |||||||||  ||||| ||||||    
T  8410227 gtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtt 8410155  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 468 - 548
Target Start/End: Original strand, 19265469 - 19265549
Alignment:
Q  468 tggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatc 548  Q
    |||||||| |||||| |  |||||||||||||| ||||||| || || ||||| |||||||| ||||| ||| | ||||||    
T  19265469 tggaatggaaacaagctctctcctttcaagcctactcatggacttcgtcaaggtgacccgctgtctccttatcttttcatc 19265549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 21642046 - 21641990
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgca 194  Q
    |||| ||||||||||| || || ||||||||||||||| |||||| ||| |||||||    
T  21642046 gttttcgacccaccaaaggcgggcgattaattcggctcatgcgtagaggcatgcgca 21641990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 468 - 568
Target Start/End: Complemental strand, 35135313 - 35135213
Alignment:
Q  468 tggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatggaaaagctct 567  Q
    |||||||| |||||| |  |||||||||||||| ||||||| || || ||||| |||||| | ||||| ||| | |||||| | || |||||||| ||||    
T  35135313 tggaatggaaacaagctctctcctttcaagcctactcatggacttcgtcaaggtgacccgttgtctccttatcttttcatcctatgtatggaaaaactct 35135214  T
Q  568 c 568  Q
    |    
T  35135213 c 35135213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 468 - 568
Target Start/End: Original strand, 40328231 - 40328331
Alignment:
Q  468 tggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatggaaaagctct 567  Q
    |||||||| |||||| |  |||||||||||||| ||||||| || || ||||| |||||| | ||||| ||| | |||||| | || |||||||| ||||    
T  40328231 tggaatggaaacaagctttctcctttcaagcctactcatggacttcgtcaaggtgacccgttgtctccttatcttttcatcctatgtatggaaaaactct 40328330  T
Q  568 c 568  Q
    |    
T  40328331 c 40328331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 41031916 - 41031988
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| |||||  || |||| ||||||||||||| ||| |||| ||||  ||||| ||||||    
T  41031916 gtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgtt 41031988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 459 - 565
Target Start/End: Original strand, 11897195 - 11897301
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg 558  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| || ||| | || || ||| | |||||| |||||||||    
T  11897195 tctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaaggtgatccgttgtccccttatcttttcatcctttgcatgg 11897294  T
Q  559 aaaagct 565  Q
    |||||||    
T  11897295 aaaagct 11897301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 47219240 - 47219161
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttg 217  Q
    |||||||||||| ||| ||||||||| |||| |||||| |||||| ||| |||||||||| |||||||||||||||||||    
T  47219240 gtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttg 47219161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 565
Target Start/End: Complemental strand, 26432798 - 26432692
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg 558  Q
    ||||| |||||||||||||||||||||||  ||||||| ||||||||||| ||||| ||||| || ||  | || || ||| | ||||||||||||||||    
T  26432798 tctatactttggaatgggaacaagttgccgtctttcaaaccttctcatggtctccgacaaggtgatccattgtccccttatctcttcatcatttgcatgg 26432699  T
Q  559 aaaagct 565  Q
    |||||||    
T  26432698 aaaagct 26432692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 15795505 - 15795582
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    |||| |||||||||| |||||| ||| |||||| ||||||||||| ||| ||||||||| ||||||||||||| ||||    
T  15795505 gttttcgacccaccattggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgttcccct 15795582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 47471927 - 47471850
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||| | | |||||||||| |||||| ||||| ||||    
T  47471927 gtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgttcccct 47471850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 50405614 - 50405690
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    |||||||||||||||||||||| ||| |||| || |||||||||| ||| |||||||||   |||||||||||||||    
T  50405614 gtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttccc 50405690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 2029278 - 2029364
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||| ||||||| ||||||||| ||| |||| | |||| |||||| ||| ||||| ||||||||||||||||||| | |||||||||    
T  2029278 gtttgcgacccatcaatggtgggcgactaatccagctcatgcgtagaggcatgcgtactaaccaagcgttgtttctcctgaaaatcg 2029364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 49021214 - 49021272
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||||||||||||||||||||| |||| |||||| |||||| ||| |||||||||    
T  49021214 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 49021272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 49543615 - 49543529
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||||||||||| || ||||| ||| |||||||||||||||||| ||| |||| |||| ||||| ||||||| ||| ||| |||||    
T  49543615 gtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcg 49543529  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 51060292 - 51060378
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||||||||||||| |||| | | || |||||| ||| ||||||||| |||||| |||||| ||| ||| |||||    
T  51060292 gtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcg 51060378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 8164648 - 8164571
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccctt 216  Q
    ||||||| ||||||| ||||| ||| |||| || |||||||||||||| |||||||||  |||||||||||| |||||    
T  8164648 tttccgatccaccaaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttcccctt 8164571  T

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Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 47749116 - 47749193
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||| ||| |||||||||  ||||| |||||| ||||    
T  47749116 gtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttgttcccct 47749193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 22909879 - 22909807
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||| ||| |||| |||| ||||||||||| |||||| | |||||||||||| || |||||||||    
T  22909879 gtttccgacccatcaaaggtgcacgactaattcggctcatgcgtagaagtatgcgcactagcctagcgttgtt 22909807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 25295056 - 25294980
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    |||||| ||||||||||||||||||| |||| |||||| ||| || ||| |||||||||  ||||| ||||||||||    
T  25295056 gtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccc 25294980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 28572222 - 28572298
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    |||||||||||||||| ||||| ||| |||| ||||||||||||| ||| ||||  |||  ||||||||||||||||    
T  28572222 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttccc 28572298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 29128015 - 29127943
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| |||| |||||| |||||| ||| ||||||||| |||||| ||||||    
T  29128015 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtt 29127943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 562
Target Start/End: Complemental strand, 15473540 - 15473446
Alignment:
Q  468 tggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatggaaaa 562  Q
    |||||||| |||||  ||||||||||||||||  ||||||||||||| ||||| ||||| || ||||| ||   ||||||  |||||||||||||    
T  15473540 tggaatggaaacaaaatgcctcctttcaagcccactcatggcctccgacaaggtgacccactttctccataccaattcatactttgcatggaaaa 15473446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 29762166 - 29762252
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||||||||||||| |||| | |||| ||| || ||| |||||||||  ||||| |||||| ||| ||| |||||    
T  29762166 gtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcg 29762252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 30767258 - 30767344
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||| ||||| ||| |||| ||||||||||||| ||| |||| ||||  ||||| |||||| ||| || ||||||    
T  30767258 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcg 30767344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 31072974 - 31072888
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||| ||| ||||| ||||||||||||||  || ||||||||| ||| ||| ||||| ||||||||||||| ||| || ||||||    
T  31072974 gtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcg 31072888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 35998582 - 35998664
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaa 220  Q
    ||||| ||||||| || |||||||||||||| |  |||||||||| ||| ||| ||||| | |||||||||||||||| ||||    
T  35998582 gtttctgacccactaaaggtggacgattaatccaactcgtgcgtagaggcatgtgcactgatcaagcgttgtttccctcgaaa 35998664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 37319900 - 37319974
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttc 212  Q
    |||||| ||||| ||| |||||||||||||||| ||||||||||| ||| |||| ||||   |||||||||||||    
T  37319900 gtttccaacccatcaacggtggacgattaattcagctcgtgcgtagaggcatgcacacttgtcaagcgttgtttc 37319974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 45877550 - 45877464
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||| |||||||| |||| |||| |||||| |||||| ||| ||| |||||  ||||| |||||||||| || ||||||    
T  45877550 gtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcg 45877464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 54237544 - 54237458
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||||||||||| |||||||||||| | || |||||| |||||| ||  ||||||||| |||||| ||||||  || |||||||||    
T  54237544 gtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaagtgttgttctccctgaaaatcg 54237458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 10040652 - 10040575
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    |||||| ||||||||| |||||||||  | | ||||||||||||| ||| |||||||||  |||||||||||| ||||    
T  10040652 gtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccct 10040575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 3507544 - 3507616
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||  ||| |||| ||||||||||||| ||| |||||||||  ||||| ||||||    
T  3507544 gtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtt 3507616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 29136009 - 29135937
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||| |||||||||||||||| || |||| |||||| |||||| ||| |||||||||  ||||| ||||||    
T  29136009 gtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 29135937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 49198447 - 49198375
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||| || ||||||||||||||||| |||| |||||| |||||| ||| |||||||||  ||||| ||||||    
T  49198447 gtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 49198375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 54261322 - 54261250
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||| || |||| |||| |||| |||||| |||||| ||| |||||||||  ||||||||||||    
T  54261322 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 54261250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 55069690 - 55069762
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||  |||||||| ||||||||||||| ||| ||| |||||  |||| |||||||    
T  55069690 gtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgtt 55069762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 26361978 - 26362057
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttg 217  Q
    |||||||||||| ||| ||||  ||| |||| ||||||||||||| ||| |||| |||| ||||| ||||||| ||||||    
T  26361978 gtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccttg 26362057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 4638250 - 4638176
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttc 212  Q
    ||||||||||||  || ||||| | | |||| ||||||||||||| |||||||||||||   |||||||||||||    
T  4638250 gtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttc 4638176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 7648831 - 7648753
Alignment:
Q  143 cgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaa 221  Q
    ||||||| ||| ||||| ||| |||| ||||||||||||| |||||||||||||   ||| ||||||| ||| ||||||    
T  7648831 cgacccaacaaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgttgttccccctgaaaa 7648753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 19147057 - 19146971
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||| ||||||||| |||| | |||||||| || ||| || | ||||  |||||||||||| | | |||||||||    
T  19147057 gtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatacacactggccaagcgttgttcctcctgaaaatcg 19146971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 43330749 - 43330819
Alignment:
Q  144 gacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    |||||||||| ||||| ||| |||| ||||||||||||| ||| |||||||||   |||| ||||||||||    
T  43330749 gacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgtttccc 43330819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 52364813 - 52364883
Alignment:
Q  140 ttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||| ||| ||| |||||||||| | ||||||||||| ||| |||||||||   |||||||||||    
T  52364813 ttccgacccatcaaaggtagacgattaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtt 52364883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 13894022 - 13893937
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatc 223  Q
    |||| ||| ||||||| ||||| ||| |||| ||||||||| ||| ||| ||||||| | ||||||||||||| ||| || |||||    
T  13894022 gttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatc 13893937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 48342117 - 48342044
Alignment:
Q  137 tgtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||| ||||||| | ||||||| ||||  || || |||||| ||| |||||||||| ||||||||||||    
T  48342117 tgtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgtt 48342044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 22405554 - 22405602
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaagg 186  Q
    ||||||||| |||||| | |||||||||||| |||||||||| ||||||    
T  22405554 gtttccgacgcaccaaagatggacgattaatccggctcgtgcataaagg 22405602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 24146340 - 24146376
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctc 175  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  24146340 tttccgacccatcaatggtggacgactaattcggctc 24146376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 24506659 - 24506762
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg-ttccggatacgt 236  Q
    |||||||||||||||||||||  ||| ||||  | ||| |||||| ||| ||| |||||   ||||||||||||||| |||||||||   ||||||||||    
T  24506659 gtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtttccc-tgaaaatcgaacccggatacgt 24506757  T
Q  237 tcttg 241  Q
    |||||    
T  24506758 tcttg 24506762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 36043685 - 36043729
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgta 182  Q
    |||||||||||||||| ||||| ||| |||| |||||||||||||    
T  36043685 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgta 36043729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 51682965 - 51683037
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||||| |||||| ||| |||| ||||||||| | | ||| |||||||||   |||||||||||    
T  51682965 gtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgtt 51683037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 7e-20; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 459 - 565
Target Start/End: Complemental strand, 23132685 - 23132579
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg 558  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| ||  || | || || ||| | |||||| |||||||||    
T  23132685 tctatactttggaacgggaacaagttgccgcctttcaagccttctcatggcctccgacaaggtgatacgttgtccccttatcttttcatcctttgcatgg 23132586  T
Q  559 aaaagct 565  Q
    |||||||    
T  23132585 aaaagct 23132579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 23895668 - 23895596
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||| ||| |||||||||||||| |  |||||||||| |||||||||||||  ||||||||||||    
T  23895668 gtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagcgttgtt 23895596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 8141202 - 8141116
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||| ||||||||||  |||||||| |||||| |||| |||||| ||| |||||||||  |||||||||||||||| || ||||||    
T  8141202 gtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcg 8141116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 3692933 - 3692864
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgtt 207  Q
    |||| ||||| ||||| |||| |||||||||||||||| |||||| ||||||||||||| ||||| ||||    
T  3692933 gttttcgacctaccaaaggtgaacgattaattcggctcatgcgtagaggtatgcgcactgaccaaacgtt 3692864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 4479306 - 4479383
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    |||||||||||||||| ||||||||| |||| | |||| |||||| ||| |||||||||  |||||||||||| ||||    
T  4479306 gtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcccct 4479383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 15884566 - 15884643
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    |||||||||||||||| ||||| ||| |||| ||||||||||||| ||| |||||||||  ||||| |||||| ||||    
T  15884566 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttcccct 15884643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 568
Target Start/End: Original strand, 38348514 - 38348623
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg 558  Q
    ||||||||||||||||| ||||  ||| |||||||||||||||| || |  || || ||||| |||| ||| ||||  |||||||| ||  |||| ||||    
T  38348514 tctatcctttggaatggcaacagattgtctcctttcaagccttcccacgatcttcgtcaaggtgacctgctatctctatatttatttattctttgtatgg 38348613  T
Q  559 aaaagctctc 568  Q
    ||||||||||    
T  38348614 aaaagctctc 38348623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 6940657 - 6940586
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||| ||||||||| |||||| || ||||||| ||| || |||||| ||||||||||| ||||||||||||    
T  6940657 gtttcctacccaccaaaggtggatgactaattcgactcatgtgtaaag-tatgcgcactagccaagcgttgtt 6940586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 10927706 - 10927634
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||| || |||| |||| |||| |||||| |||||| ||| |||||||||  ||||||||||||    
T  10927706 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 10927634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 526
Target Start/End: Original strand, 26587274 - 26587338
Alignment:
Q  462 atcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagaccc 526  Q
    |||||||| ||||| ||||| ||||| || ||||||||| ||||||||||||| ||||| |||||    
T  26587274 atcctttgaaatggtaacaaattgccccccttcaagcctactcatggcctccgacaaggtgaccc 26587338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 34710577 - 34710653
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    |||| ||||||||||||| ||||||| || | || || ||| ||||||| |||||||||| ||||| ||||||||||    
T  34710577 gttttcgacccaccaatgatggacgactagtccgacttgtgtgtaaaggcatgcgcactagccaagtgttgtttccc 34710653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 43033001 - 43032929
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||| |||||||||| ||||| ||| |||| ||||||||| ||| ||| |||||||||  ||||||||||||    
T  43033001 gtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgtt 43032929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 8803154 - 8803095
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcacta 197  Q
    ||||||||||||||| || ||| ||| |||| ||||||||||||| |||| |||||||||    
T  8803154 gtttccgacccaccattgatgggcgactaatccggctcgtgcgtagaggtctgcgcacta 8803095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 3568004 - 3567946
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||||||||||| |||||| || ||||| ||||| |||||| ||||||| |||||    
T  3568004 gtttccgacccaccaaaggtggatgactaatttggctcatgcgtagaggtatgtgcact 3567946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 68108 - 68161
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgc 191  Q
    |||||||||||| ||| |||| ||||||||| ||||||||| ||||||| ||||    
T  68108 gtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgc 68161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 6042915 - 6042842
Alignment:
Q  144 gacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttg 217  Q
    ||||||||| |||||| ||| |||| |||||| |||||  ||| |||||||||  |||||||||||| ||||||    
T  6042915 gacccaccagtggtgggcgactaatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttg 6042842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 18374110 - 18374038
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||| ||||||||||| | ||||||| |||| |||||| |||||| ||| |||||||||   |||||||||||    
T  18374110 gttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgtt 18374038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 44893288 - 44893360
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||| ||| ||||  |||||||| ||||||||||||| ||| |||| ||||  |||||| |||||    
T  44893288 gtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgtt 44893360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 7e-20; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 38075534 - 38075448
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||| ||| |||||||||  |||||||||||||||| ||| |||||    
T  38075534 gtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcg 38075448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 40780871 - 40780957
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||| ||||||||| |||| |||||| |||||| ||| ||||||||| ||||||||||||| ||||||| |||||    
T  40780871 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcg 40780957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 29588836 - 29588761
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    ||||||||||||||||||||||  | |||| ||||||||||||| ||| |||||||||| |||||| |||||||||    
T  29588836 tttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttccc 29588761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 49260676 - 49260754
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttg 217  Q
    ||||||||||||||| ||||| ||| |||| ||||||||||||| ||| |||||||||  |||||||||||| ||||||    
T  49260676 tttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccttg 49260754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 5472858 - 5472943
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatc 223  Q
    |||| ||||||||||| ||||| ||| |||| ||||||||||||| ||| |||||||||  |||||||||||||||| ||| ||||    
T  5472858 gttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatc 5472943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 2559408 - 2559336
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||||||| |||| ||||| ||||||| ||| |||||||||  ||||||||||||    
T  2559408 gtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgtt 2559336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 562
Target Start/End: Original strand, 14307827 - 14307930
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg 558  Q
    ||||| |||||||||||||||||| ||| |||||| |||||||| ||||||||| | |||||||| || | ||| || ||  | ||||||||||| ||||    
T  14307827 tctattctttggaatgggaacaagatgcatccttttaagccttcccatggcctcagacaaggagatcctccctcgccttaccttttcatcatttgtatgg 14307926  T
Q  559 aaaa 562  Q
    ||||    
T  14307927 aaaa 14307930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 20128410 - 20128324
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||| |||||||||||||||||||| ||||   ||||||||||||||| |||||||||  |||||| ||||| ||| ||| |||||    
T  20128410 gtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcg 20128324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 3159479 - 3159551
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||||||||  ||| ||||  |||||||||||| ||| |||||||||  ||||||||||||    
T  3159479 gtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 3159551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 3507371 - 3507299
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||| ||||||| ||||||||| |||| ||||||||| ||| ||| | |||||||| ||||||||||||    
T  3507371 gtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgttgtt 3507299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 7246656 - 7246728
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| |||| |||||| |||||| ||| |||||||||  ||||||||||||    
T  7246656 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 7246728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 459 - 523
Target Start/End: Original strand, 14291778 - 14291842
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggaga 523  Q
    ||||| |||||||||||||||||| ||| |||||| |||||||| ||||||||| | ||||||||    
T  14291778 tctattctttggaatgggaacaagatgcatccttttaagccttcccatggcctcagacaaggaga 14291842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 29895888 - 29895816
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||| ||||||||||||||||| |||| |||||| |||||| ||| |||||||||  ||||| ||||||    
T  29895888 gtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 29895816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 30317334 - 30317262
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||| ||| || || |||  ||||||||||||    
T  30317334 gtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgtt 30317262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 38166128 - 38166056
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| |||| ||||||||||||| ||  |||||||||  ||||||||||||    
T  38166128 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgtt 38166056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 47078559 - 47078487
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||||||||  ||| |||| ||||||||||||| ||| ||| |||||  ||||||||||||    
T  47078559 gtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgtt 47078487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 20421874 - 20421788
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||| ||||| ||||||||||||  ||||| |||||| ||| |||||||||  ||||| |||||| ||| || ||||||    
T  20421874 gtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcg 20421788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 4738719 - 4738647
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||||||| |||||| |||| |||||| ||  |||||||||  | ||||||||||    
T  4738719 gtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaagcgttgtt 4738647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 8889123 - 8889051
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||||||| |||| |||||| |||||| ||  |||||||||  ||||| ||||||    
T  8889123 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgtt 8889051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 55921135 - 55921063
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||  |||||||| |||||| | |||| ||| ||||||||| |||||| ||||||    
T  55921135 gtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgtt 55921063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 1940787 - 1940856
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||| ||||||||||| ||||| ||| |||| ||||||||||||| ||| ||||||||   ||||||||||||    
T  1940787 gttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgtt 1940856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 10541116 - 10541031
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||| ||| ||| ||||| ||||||||  |||||||||||| ||| |||| ||||  |||||||||||||||| || ||||||    
T  10541116 gtttccgatccatcaaaggtgg-cgattaatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcg 10541031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 26237432 - 26237518
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||| ||||||||||| | |||| || ||| |||||||||  || |||||| | ||| ||||||||||| ||| |||||    
T  26237432 gtttccgacccatcaatggtggactactaatccgactcatgcgtaaagacatacgcactgatcaaacgttgtttcccctgagaatcg 26237518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 40272341 - 40272427
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||||||||||||||||||| ||||  ||| || ||  |||||| ||| |||||||||  |||||||||||| ||| || ||||||    
T  40272341 gtttccgacccaccaatggtgaacgacaaatccgacttatgcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcg 40272427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 48317285 - 48317371
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||| ||||| ||| ||||| ||| |||| ||||||||||||| ||| || | |||| ||||||||||||| | | |||||||||    
T  48317285 gtttccaacccatcaacggtgggcgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcg 48317371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 50486044 - 50485990
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcg 192  Q
    ||||||||||||| |||||||| ||| |||| ||||||||||||| ||| |||||    
T  50486044 gtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcatgcg 50485990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 16450401 - 16450329
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||| ||||| ||||||||| ||||  ||||| |||||| ||| ||| |||||  ||||||||||||    
T  16450401 gtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgtt 16450329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 20354738 - 20354666
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||| || || |||| |||||||| |||| || ||| |||||| ||| |||||||||| ||||||||||||    
T  20354738 gtttccaactcatcaatagtggacgactaatccgactcatgcgtagaggcatgcgcactagccaagcgttgtt 20354666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 531 - 567
Target Start/End: Complemental strand, 24133276 - 24133240
Alignment:
Q  531 tctccctatttattcatcatttgcatggaaaagctct 567  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  24133276 tctccttatttattcattatttgcatggaaaagctct 24133240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 36145225 - 36145301
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    ||||||||  || ||| ||||||||| |||| |||||| || ||| ||| ||||||||| | |||||||||||||||    
T  36145225 gtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttccc 36145301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 36262777 - 36262849
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||| |||||||||| ||||| ||| |||| || |||||||||| ||| ||| |||||  ||||||||||||    
T  36262777 gtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgtt 36262849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 42722587 - 42722659
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||| |||||||| || |||| |||| |||| |||||| |||||| ||| |||||||||  ||||||||||||    
T  42722587 gttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 42722659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 54946350 - 54946286
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaa 202  Q
    |||||||||||||||||| ||| ||| |||| |||||| |||||| ||| ||||| ||| |||||    
T  54946350 gtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatgcggactgaccaa 54946286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 12635914 - 12635838
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    ||||||||||||||||| |||| ||| |||| ||||| ||||||| ||| |||||||||| ||||||||||||||||    
T  12635914 gtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttccc 12635838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 3601184 - 3601098
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||| ||||||||| |||| ||||||||| ||| ||| |||||||||  |||||||||||| ||| ||| |||||    
T  3601184 gtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatcg 3601098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 9633635 - 9633707
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| |||| ||||||||||||| ||| |||||||||  ||||||||||||    
T  9633635 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 9633707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 570
Target Start/End: Complemental strand, 27853058 - 27852947
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg 558  Q
    ||||| |||||||| || |||||  ||||| ||||||||||||||||||| ||  | ||||| |||||  | ||||| || ||||||||| |||| ||||    
T  27853058 tctattctttggaacggaaacaaaatgccttctttcaagccttctcatggtctaagacaaggggaccctttatctccttacttattcatcctttgtatgg 27852959  T
Q  559 aaaagctctcca 570  Q
    ||||||||||||    
T  27852958 aaaagctctcca 27852947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 13036014 - 13036100
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||||||||||||||| |||||||| ||||  ||||| |||||| ||| |||||||||  ||||| |||||| ||| |||||||||    
T  13036014 gtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcg 13036100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 5253233 - 5253305
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| |||||||| |||||| |||||| ||| |||||||||  ||||| ||||||    
T  5253233 gtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 5253305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 14783430 - 14783494
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaa 202  Q
    |||||||||||||||||||||||||| |||| |||||| |||||| ||| |||| ||||| ||||    
T  14783430 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactagccaa 14783494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 19230576 - 19230654
Alignment:
Q  145 acccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||||||||| || |||| |||| ||||||||||||| ||| ||||  ||| ||||||||||| |||||||||||||||    
T  19230576 acccaccaatgatgaacgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttg-ttcccttgaaaatcg 19230654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 6606107 - 6606193
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||||||||||||||||| |||| |||||| |||||| ||| |||  ||||  ||||| |||||| ||| ||| |||||    
T  6606107 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcg 6606193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 8888982 - 8888896
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||| ||| ||| ||| ||||||||| |||| || ||| |||||| |||||||||||||  |||| ||||||||||||| |||||||    
T  8888982 gttttcgatccatcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgttgtttcccttaaaaatcg 8888896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 568
Target Start/End: Complemental strand, 12646084 - 12645975
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg 558  Q
    ||||||||||||||||||||||   |||||| ||||||||| |||||||| ||| |  |||| || || ||||| || ||||| || ||  |||| ||||    
T  12646084 tctatcctttggaatgggaacattatgcctcttttcaagccatctcatggtctcaggtaaggggatcccctctccccttatttgtttattctttgtatgg 12645985  T
Q  559 aaaagctctc 568  Q
    ||||||||||    
T  12645984 aaaagctctc 12645975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 8932761 - 8932689
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||| ||| |||||  ||||||| |||||| |||||| ||| |||||||||| ||||| ||||||    
T  8932761 gtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgtt 8932689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 8944227 - 8944155
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||| ||| |||||  ||||||| |||||| |||||| ||| |||||||||| ||||| ||||||    
T  8944227 gtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgtt 8944155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 13469033 - 13468961
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||| ||||||||||||||| ||| ||||  |||||||||||| ||| ||| ||||| ||||| |||||||    
T  13469033 gtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgtt 13468961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 19089598 - 19089526
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||| ||||| |||| ||||||||||||| ||| |||| ||||  ||||| ||||||    
T  19089598 gtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgtt 19089526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 21898748 - 21898676
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||| || |||| |||| |||| |||||| |||||| ||| |||||||||  ||||||||||||    
T  21898748 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 21898676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 29444775 - 29444847
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| | ||||| | |||| |||||| |||||| ||| |||||||||  ||||||||||||    
T  29444775 gtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 29444847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 30788863 - 30788935
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| |||| |||||||||| || ||| |||||||||  |||| |||||||    
T  30788863 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgtt 30788935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 34954629 - 34954715
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||| ||| ||||||||| ||||  ||||| |||||| ||||||| |||||  |||| ||||||| ||| ||| |||||    
T  34954629 gtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcg 34954715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 13584456 - 13584493
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctc 175  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  13584456 gtttccgacccaccaaaggtggacgattaatccggctc 13584493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 565
Target Start/End: Complemental strand, 24893933 - 24893836
Alignment:
Q  468 tggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatggaaaagct 565  Q
    |||||||| |||||  |||| |||||||||||  | ||||| ||| | ||||| |||||||||||||| ||| | |||||  | ||||||||||||||    
T  24893933 tggaatggtaacaaaatgccccctttcaagcccacacatggtctcagacaaggtgacccgctctctccttatcttttcatactatgcatggaaaagct 24893836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 2271313 - 2271385
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||| |||||| ||| ||||||||| |||| ||||||||||||| ||  |||||||||  | ||||||||||    
T  2271313 gtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgtt 2271385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 8938811 - 8938767
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgta 182  Q
    |||||||||||| ||| ||||||||| ||||||||||| ||||||    
T  8938811 gtttccgacccatcaaaggtggacgactaattcggctcatgcgta 8938767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 12606520 - 12606444
Alignment:
Q  148 caccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||| ||||| ||| |||| ||||||||||||| ||| |||||||||  |||| ||||||| ||| || ||||||    
T  12606520 caccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcg 12606444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 26325909 - 26325837
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||||||||||||| |||| |||||| |||||| ||| ||||||||| |||||| ||||||    
T  26325909 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtt 26325837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 14254279 - 14254365
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||| ||| ||||||||| |||| |||||| |||||||||| ||||| |||  |||||||||||| ||| |||||||||    
T  14254279 gtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcg 14254365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 459 - 568
Target Start/End: Original strand, 1525014 - 1525123
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg 558  Q
    ||||| ||||||||||| ||||| || ||||||||||||||||| || || || || ||||| |||||||| |||||||| ||||| ||  | || ||||    
T  1525014 tctattctttggaatggtaacaaattacctcctttcaagccttcccacggtcttcggcaaggtgacccgctatctccctacttatttattctctgtatgg 1525113  T
Q  559 aaaagctctc 568  Q
    ||||||||||    
T  1525114 aaaagctctc 1525123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 8764088 - 8764016
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||  ||||| ||||||    
T  8764088 gtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtt 8764016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 17642015 - 17642087
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||  ||||| ||||||    
T  17642015 gtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtt 17642087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 41663867 - 41663939
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||||||||||||| |||| | |||| |||||| ||| ||||||||| |||||| ||||||    
T  41663867 gtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgtt 41663939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 5504128 - 5504042
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||| ||| ||||||||| |||| |||||| |||||| ||| ||| ||||||| |||||||||||| || ||| |||||    
T  5504128 gtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcg 5504042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 32142857 - 32142943
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||||||| ||| ||||  ||| ||||||||||| |||||||||| |||||||||  ||||| |||||| ||| |||||||||    
T  32142857 gtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcg 32142943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 21849216 - 21849293
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccct 215  Q
    |||| |||||||||||| |||  ||| |||| ||||||||||||| ||| |||||||||| |||||||||||| ||||    
T  21849216 gttttcgacccaccaatagtgagcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttcccct 21849293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 10507795 - 10507723
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||| |||||||| ||||  |||| |||||||    
T  10507795 gtttccgacccaccagtggtggacgactaatccggctcatgcgtagaggtatgcacactggccaaacgttgtt 10507723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 12036756 - 12036827
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||| ||||||| ||||||||||||||  |||||||||||| ||| |||||||||  |||||| |||||    
T  12036756 tttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactggccaagcattgtt 12036827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 26258792 - 26258721
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgt 209  Q
    |||||| |||||| || |||||||||||||| || ||| |||||||||| ||| ||||| ||||||||||||    
T  26258792 gtttccaacccactaaaggtggacgattaatccgactcatgcgtaaaggcatgtgcactgaccaagcgttgt 26258721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 33418126 - 33418197
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgt 209  Q
    |||||||||| ||||| ||||||||| |||| |||||||||| || ||| |||||||||  |||||||||||    
T  33418126 gtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgt 33418197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 4581693 - 4581751
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||||||||||| ||||||||| || | ||||||||||||| ||| |||||||||    
T  4581693 gtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcact 4581751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 10336613 - 10336527
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||| ||| ||| ||| |||||||||||||| |||||| |||||| ||| |||||||||   ||||||||||| ||| |||||||||    
T  10336613 gttttcgatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcg 10336527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 565
Target Start/End: Original strand, 20284896 - 20285002
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatgg 558  Q
    ||||| |||||||| |||||   |||||| |||||| |||||||||||||||| || ||||| || ||| | || || ||| | |||||| |||||||||    
T  20284896 tctatactttggaacgggaaagggttgccgcctttcgagccttctcatggcctgcgacaaggtgatccgttgtccccttatcttttcatcctttgcatgg 20284995  T
Q  559 aaaagct 565  Q
    |||||||    
T  20284996 aaaagct 20285002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 33004026 - 33004112
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||| |||||||||| ||||||  || |||| ||||||||||||| ||| |||||||||  |||||| ||||||||| || ||||||    
T  33004026 gttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcg 33004112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 42710149 - 42710235
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||||| | ||||||||||||||| |||||||| |  |||||| ||| |||||||||  |||||  ||||||||| |||||||||    
T  42710149 gtttccgatctaccaatggtggacgactaattcggtttatgcgtagaggcatgcgcactggccaagtattgtttcccctgaaaatcg 42710235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 48761272 - 48761187
Alignment:
Q  139 tttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||||||| ||||| ||||||||| |||| | ||||||||||| ||| |||  |||| ||||| ||||||| | |||||||||||    
T  48761272 tttccgaccgaccaaaggtggacgactaatccagctcgtgcgtagaggcatgtccactgaccaaacgttgttcctcttgaaaatcg 48761187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 10172982 - 10173054
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| |||| |||||| |||||| ||| ||| |||||  ||||||||||||    
T  10172982 gtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgtt 10173054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 31734369 - 31734309
Alignment:
Q  154 tggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    |||||||||||||||| ||||||| |||| ||| |||||||||  |||| |||||||||||    
T  31734369 tggtggacgattaatttggctcgtacgtagaggcatgcgcactggccaatcgttgtttccc 31734309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 43959832 - 43959904
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||| |||| || ||||| ||| |||| ||||||||||||| ||| |||||||||  ||||||||||||    
T  43959832 gtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 43959904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 12744533 - 12744620
Alignment:
Q  137 tgtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||| ||||||||||  |||  ||| ||||||||||| |||||| ||  ||||||||||  ||||||||||| ||| |||||||||    
T  12744533 tgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcg 12744620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 12755523 - 12755610
Alignment:
Q  137 tgtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||||| ||||||||||  |||  ||| ||||||||||| |||||| ||  ||||||||||  ||||||||||| ||| |||||||||    
T  12755523 tgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcg 12755610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 17092499 - 17092574
Alignment:
Q  149 accaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||| ||||||||| |||| ||||||||||||| ||| || | ||||  |||| ||||||||||| |||||||||    
T  17092499 accaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcg 17092574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 37339917 - 37339846
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgt 209  Q
    |||||| ||||||||| ||||| ||| |||| ||||||||||||  ||| |||||||||  |||||||||||    
T  37339917 gtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgt 37339846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 14357852 - 14357794
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||||||| |||||||  ||||||||| ||| ||||||||| ||| |||||||||    
T  14357852 gtttccgacccatcaatggtaaacgattaatccggttcgtgcgtagaggcatgcgcact 14357794  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 32150933 - 32151019
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    |||| ||||||| ||| ||||  ||| ||||||||||| |||||||||| ||||||||| |||||  |||||| ||| || ||||||    
T  32150933 gttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcg 32151019  T

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Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 35211183 - 35211237
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcg 192  Q
    |||||||||||||||| ||||||||| |||||| |||| |||||| ||| |||||    
T  35211183 gtttccgacccaccaaaggtggacgactaattcagctcatgcgtagaggcatgcg 35211237  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 50503372 - 50503430
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    ||||||||||||||| |||||| |||  ||| ||||||||||||| ||| |||||||||    
T  50503372 gtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcact 50503430  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 35908853 - 35908791
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaa 202  Q
    |||||||||||||  ||||||||||| |||| |||||| |||||| ||| ||||||||| |||||    
T  35908853 gtttccgacccac--atggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaa 35908791  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 38791640 - 38791697
Alignment:
Q  157 tggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    ||||||| ||||||||||| |||||| ||| |||||||||  |||| |||||||||||    
T  38791640 tggacgactaattcggctcatgcgtagaggcatgcgcacttgccaatcgttgtttccc 38791697  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 512
Target Start/End: Complemental strand, 50236668 - 50236615
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctc 512  Q
    |||||| | ||||| ||||||||| |||| |||||||||||| |||||||||||    
T  50236668 tctatcttatggaacgggaacaagatgccccctttcaagcctactcatggcctc 50236615  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 32968 - 32896
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||| ||| |||  || ||||| ||||||||||| |||||| ||| ||| ||||| |||||||||||||    
T  32968 gtttccgatccatcaaaagtagacgactaattcggctcatgcgtagaggcatgtgcactgaccaagcgttgtt 32896  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 5855619 - 5855547
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||||||||| || |||| |||| |||| || ||| |||||| ||| |||||||||  ||||||||||||    
T  5855619 gtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgtt 5855547  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 18915964 - 18915892
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||| ||||||||||||||  ||| |||| ||||||||||||| ||| |||| ||||  ||||| ||||||    
T  18915964 gtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgtt 18915892  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 44969761 - 44969689
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||| ||||||||| ||||||| |||| |||||| ||||||  || |||| ||||  ||||||||||||    
T  44969761 gtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttgtt 44969689  T

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Target: scaffold0170 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 9944 - 9858
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||| |||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||  |||||||||||| ||| || ||||||    
T  9944 gtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcg 9858  T

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Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 155723 - 155793
Alignment:
Q  140 ttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||| ||||| ||| |||| ||||||||||||| ||| |||||||||| ||||||||||||    
T  155723 ttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgtt 155793  T

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Target: scaffold0384 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 6071 - 6000
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgt 209  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||| ||| ||| |||||  |||||||||||    
T  6071 gtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttgt 6000  T

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Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 26282 - 26196
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||||||| || |||| |||||||| |||| ||||||||||||| ||| |||| ||||  |||||||||||| ||| || ||||||    
T  26282 gtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcg 26196  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 41143 - 41057
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttcccttgaaaatcg 224  Q
    ||||||||| |||||| | ||| ||| |||| ||||||||||||| ||| |||| |||| |||||| |||||| ||||||| |||||    
T  41143 gtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcg 41057  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 224416 - 224358
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcact 196  Q
    |||||||||||||||| | ||||||| |||| ||||||||||||| ||||||| |||||    
T  224416 gtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcact 224358  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 8711 - 8783
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||||||| |||| | |||| |||||| ||| | |||||||  ||||||||||||    
T  8711 gtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgtt 8783  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 42842 - 42914
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||| ||| |||| |||||| || ||| ||| ||||||||| ||||||| |||||    
T  42842 gtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgtt 42914  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 319421 - 319369
Alignment:
Q  227 ccggatacgttcttggaagaagcttcttgtcattggagcctagcaacttggtt 279  Q
    |||||||||| |||||||| |||| |||| || ||||||||||||||||||||    
T  319421 ccggatacgtccttggaaggagctccttgccactggagcctagcaacttggtt 319369  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 319521 - 319449
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    ||||||| |||||||| ||||||||| |||| | |||| ||| || ||| |||||||||  ||||||||||||    
T  319521 gtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgtt 319449  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 68613 - 68544
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||| ||||||||||| ||||| ||| |||| ||||||||||||| ||| ||||||||   ||||||||||||    
T  68613 gttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgtt 68544  T

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Target: scaffold0214 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 512
Target Start/End: Original strand, 9011 - 9064
Alignment:
Q  459 tctatcctttggaatgggaacaagttgcctcctttcaagccttctcatggcctc 512  Q
    ||||| ||||||||||| || | | ||||||||||| |||||||||||||||||    
T  9011 tctattctttggaatggtaataggctgcctcctttcgagccttctcatggcctc 9064  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 568
Target Start/End: Original strand, 75967 - 76060
Alignment:
Q  475 ggaacaagttgcctcctttcaagccttctcatggcctccgccaaggagacccgctctctccctatttattcatcatttgcatggaaaagctctc 568  Q
    |||||||| ||||| | ||||||||| ||||||| ||| | ||||| |||| | | || || ||| | |||||| |||||||||||||||||||    
T  75967 ggaacaagctgccttccttcaagcctactcatggtctcagacaaggtgaccagttgtccccttatcttttcatcctttgcatggaaaagctctc 76060  T

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Target: scaffold0291 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 6954 - 6882
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||||||||||| ||||  ||| |||| |||||| |||||| ||| |||||||||  ||||| ||||||    
T  6954 gtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 6882  T

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Target: scaffold0223 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 16978 - 16902
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtttccc 214  Q
    |||||| ||||||||| ||||  ||| ||||  |||||||||||| ||  || |||||| |||||||||||||||||    
T  16978 gtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtttccc 16902  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 19354 - 19282
Alignment:
Q  138 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactaaccaagcgttgtt 210  Q
    |||||||| |||| |||  ||| ||| |||| |||||| |||||| |||| ||||||||| ||||||||||||    
T  19354 gtttccgatccactaataatggccgactaatccggctcatgcgtagaggtctgcgcactagccaagcgttgtt 19282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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