View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19007_low_11 (Length: 404)
Name: NF19007_low_11
Description: NF19007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19007_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 18 - 389
Target Start/End: Original strand, 38926234 - 38926605
Alignment:
| Q |
18 |
aataatctacaagatttataattaatacaagaccagttttctttataactaaaccagcaagaaggattttgtttcttgctttttcttcctacgcaccaaa |
117 |
Q |
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| T |
38926234 |
aataatctacaagatttataattaatacaagaccagttttctttataattaaaccagcaagaaggattttgtttcttgctttttcttcctacgcaccaaa |
38926333 |
T |
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| Q |
118 |
caatcaaccttattacacaaaaacaagaacatgttctacaaatttcttgctaatctttcctgtgccgccatctgttttctgaacctgttaatgaactcct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38926334 |
caatcaaccttattacacaaaaacaagaacatgttctacaaatttcttgctaatctttcctgtgccgccatctgttttctgaacctgttaatgaactcct |
38926433 |
T |
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| Q |
218 |
ctgctcgttcatcaattccttgcatttgaggtgaagctaatgctaccgactcccacatatcatctgatgtattagttctgtcacatgatcgattgcttgc |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38926434 |
ctgctcgttcatcaattccttgcatttgaggtgaagctaatgctaccgactcccacatatcatctgatgtattagttctgtcacatgatcgattgcttgc |
38926533 |
T |
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| Q |
318 |
tccttctagcacgtcttttttctctcgttgataatcaccaatcttcgcagttatttcaatttgtggtctttg |
389 |
Q |
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||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
38926534 |
tccttctggcacgtcttttttctctagttgataatcaccaatcttcgcagttatttcgatttgtggtctttg |
38926605 |
T |
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