View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19007_low_28 (Length: 323)
Name: NF19007_low_28
Description: NF19007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19007_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 32223333 - 32223025
Alignment:
| Q |
1 |
aagtgactgattggagggatcttgacaagtttgtggcttctcagttgagtcaagaagatcataggcatgaaacaagctcagacatgtcattgttcctact |
100 |
Q |
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| T |
32223333 |
aagtgactgattggagggatcttgacaagtttgtggcttctcagttgagtcaagaagatcataggcatgaaacaagctcagacatgtcattgttcctact |
32223234 |
T |
|
| Q |
101 |
tcaaagtagtaaggatgatgaagagaacaagttaagctcatttttaactacaaggtcagattgtgacattggaatatgtgtatttgaaaattaaatgcat |
200 |
Q |
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| T |
32223233 |
tcagagtagtaaggatgatgaagagaacaagttaagctcatttttaactacaaggtcagattgtgacattggaatatgtgtatttgaaaattaaatgcat |
32223134 |
T |
|
| Q |
201 |
gtagaagggactaactttgttgcatttgtagtatctatatgaatatgaatgtttgatggatgctttgagaatgatatataat---aatattatggttttg |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |
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| T |
32223133 |
gtagaagggactaactttgttgcatttgtagtatctatatgaatatgaatgtttgatggatgctttgaggatgatatataataataatattatggttttg |
32223034 |
T |
|
| Q |
298 |
tcaaacatg |
306 |
Q |
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||||||||| |
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| T |
32223033 |
tcaaacatg |
32223025 |
T |
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