View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19007_low_40 (Length: 254)

Name: NF19007_low_40
Description: NF19007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19007_low_40
NF19007_low_40
[»] chr1 (44 HSPs)
chr1 (18-247)||(13785691-13785920)
chr1 (20-166)||(32260742-32260888)
chr1 (18-166)||(11693609-11693757)
chr1 (89-162)||(4131799-4131872)
chr1 (91-162)||(9459932-9460003)
chr1 (91-162)||(9463759-9463830)
chr1 (91-162)||(39931772-39931843)
chr1 (91-162)||(46432555-46432626)
chr1 (91-162)||(47905966-47906037)
chr1 (91-162)||(48664862-48664933)
chr1 (93-162)||(17325148-17325217)
chr1 (91-162)||(6997224-6997295)
chr1 (91-162)||(24325357-24325428)
chr1 (91-162)||(31736034-31736105)
chr1 (91-158)||(45693943-45694010)
chr1 (91-156)||(6115636-6115701)
chr1 (91-162)||(2949734-2949805)
chr1 (91-162)||(15295358-15295429)
chr1 (91-162)||(27339649-27339720)
chr1 (91-162)||(28998763-28998834)
chr1 (91-162)||(29004479-29004550)
chr1 (91-162)||(27337451-27337522)
chr1 (45-127)||(10115517-10115599)
chr1 (91-144)||(21948702-21948755)
chr1 (91-158)||(16561145-16561212)
chr1 (18-80)||(14352751-14352813)
chr1 (26-75)||(15295310-15295359)
chr1 (26-75)||(21948654-21948703)
chr1 (26-75)||(24325427-24325476)
chr1 (26-75)||(27337403-27337452)
chr1 (26-75)||(31735986-31736035)
chr1 (26-75)||(39931842-39931891)
chr1 (26-75)||(47906036-47906085)
chr1 (27-75)||(6115589-6115637)
chr1 (61-125)||(16855230-16855296)
chr1 (26-75)||(2949686-2949735)
chr1 (26-75)||(9463711-9463760)
chr1 (18-75)||(16561211-16561268)
chr1 (26-75)||(48664932-48664981)
chr1 (91-134)||(6996067-6996110)
chr1 (26-75)||(6996109-6996158)
chr1 (27-72)||(17325099-17325144)
chr1 (26-67)||(27339597-27339638)
chr1 (26-70)||(45693895-45693939)
[»] chr4 (33 HSPs)
chr4 (23-166)||(5516700-5516843)
chr4 (18-158)||(29609843-29609983)
chr4 (63-167)||(38209160-38209264)
chr4 (91-162)||(22135138-22135209)
chr4 (91-162)||(24347969-24348040)
chr4 (91-162)||(56030199-56030270)
chr4 (91-162)||(5100753-5100824)
chr4 (91-162)||(14787940-14788011)
chr4 (91-158)||(22132906-22132973)
chr4 (95-162)||(38890624-38890691)
chr4 (91-162)||(47211227-47211298)
chr4 (91-156)||(30136331-30136396)
chr4 (18-125)||(10979626-10979733)
chr4 (91-162)||(44600347-44600418)
chr4 (91-155)||(17662745-17662809)
chr4 (18-166)||(54929123-54929271)
chr4 (101-162)||(14789500-14789561)
chr4 (94-162)||(19322418-19322487)
chr4 (18-75)||(10112702-10112759)
chr4 (26-75)||(22132858-22132907)
chr4 (26-75)||(22135090-22135139)
chr4 (26-75)||(44600299-44600348)
chr4 (91-162)||(10112636-10112703)
chr4 (62-104)||(32274322-32274364)
chr4 (36-101)||(14647175-14647240)
chr4 (26-75)||(56030269-56030318)
chr4 (26-70)||(47211179-47211223)
chr4 (58-102)||(55359200-55359244)
chr4 (91-162)||(9863509-9863580)
chr4 (26-75)||(5100823-5100872)
chr4 (26-71)||(24348042-24348087)
chr4 (26-75)||(30136395-30136444)
chr4 (24-69)||(38890588-38890633)
[»] chr8 (22 HSPs)
chr8 (18-166)||(13986231-13986378)
chr8 (89-162)||(15808972-15809045)
chr8 (91-162)||(3265671-3265742)
chr8 (91-162)||(3873760-3873831)
chr8 (91-162)||(32339104-32339175)
chr8 (91-162)||(43529881-43529952)
chr8 (91-162)||(28283732-28283803)
chr8 (94-162)||(41384503-41384571)
chr8 (91-160)||(608482-608551)
chr8 (94-162)||(41382429-41382497)
chr8 (24-75)||(608550-608601)
chr8 (70-166)||(30679163-30679260)
chr8 (26-75)||(3873830-3873879)
chr8 (26-75)||(28283684-28283733)
chr8 (26-75)||(32339174-32339223)
chr8 (29-85)||(11701401-11701457)
chr8 (26-72)||(15809045-15809091)
chr8 (63-117)||(27820121-27820175)
chr8 (26-75)||(43529951-43530000)
chr8 (26-73)||(41384575-41384622)
chr8 (27-73)||(41382501-41382547)
chr8 (52-105)||(21006560-21006613)
[»] chr2 (21 HSPs)
chr2 (18-166)||(15693579-15693726)
chr2 (23-166)||(41303483-41303627)
chr2 (18-166)||(41304828-41304968)
chr2 (18-166)||(39286884-39287028)
chr2 (91-162)||(42924013-42924084)
chr2 (94-162)||(23452751-23452819)
chr2 (91-162)||(35216103-35216174)
chr2 (91-162)||(35218484-35218555)
chr2 (89-162)||(27136422-27136495)
chr2 (91-162)||(27583826-27583897)
chr2 (91-162)||(42452459-42452530)
chr2 (92-166)||(28568670-28568744)
chr2 (97-166)||(28568342-28568411)
chr2 (91-162)||(34575622-34575693)
chr2 (26-75)||(42452529-42452578)
chr2 (24-75)||(23452698-23452749)
chr2 (18-72)||(28568613-28568667)
chr2 (30-75)||(35216059-35216104)
chr2 (30-75)||(35218440-35218485)
chr2 (26-75)||(42923965-42924014)
chr2 (25-69)||(27136367-27136411)
[»] chr6 (25 HSPs)
chr6 (18-166)||(30445225-30445375)
chr6 (18-166)||(30443018-30443166)
chr6 (91-162)||(30035115-30035186)
chr6 (91-162)||(5275847-5275918)
chr6 (91-162)||(2629398-2629469)
chr6 (91-162)||(12196023-12196094)
chr6 (91-162)||(26933077-26933148)
chr6 (91-162)||(30966933-30967004)
chr6 (18-162)||(18317761-18317888)
chr6 (94-162)||(20526556-20526624)
chr6 (91-162)||(19705084-19705155)
chr6 (24-75)||(19705034-19705085)
chr6 (91-162)||(22858455-22858526)
chr6 (99-162)||(17852277-17852341)
chr6 (26-75)||(2629350-2629399)
chr6 (26-75)||(5275799-5275848)
chr6 (26-75)||(12195975-12196024)
chr6 (26-70)||(30035067-30035111)
chr6 (58-125)||(13280640-13280707)
chr6 (26-75)||(30967003-30967052)
chr6 (27-75)||(22858408-22858456)
chr6 (119-166)||(12158524-12158571)
chr6 (63-104)||(12747239-12747280)
chr6 (26-75)||(17852346-17852395)
chr6 (58-102)||(13484340-13484384)
[»] chr3 (33 HSPs)
chr3 (30-166)||(11072640-11072776)
chr3 (89-162)||(53918167-53918240)
chr3 (91-162)||(746432-746503)
chr3 (91-162)||(41848814-41848885)
chr3 (68-166)||(53974103-53974201)
chr3 (18-140)||(54287505-54287627)
chr3 (89-162)||(1313092-1313165)
chr3 (26-162)||(25533117-25533236)
chr3 (91-162)||(455583-455654)
chr3 (91-162)||(457960-458031)
chr3 (91-162)||(10622046-10622117)
chr3 (91-162)||(51943052-51943123)
chr3 (91-162)||(53916001-53916072)
chr3 (18-166)||(11066251-11066400)
chr3 (94-162)||(42989962-42990030)
chr3 (91-162)||(42991963-42992034)
chr3 (91-156)||(27636131-27636196)
chr3 (98-162)||(4104409-4104473)
chr3 (98-162)||(6561623-6561687)
chr3 (24-75)||(4104352-4104403)
chr3 (28-126)||(12019168-12019267)
chr3 (26-75)||(746502-746551)
chr3 (28-125)||(5535882-5535982)
chr3 (26-75)||(41848884-41848933)
chr3 (26-76)||(42990031-42990081)
chr3 (26-75)||(455653-455702)
chr3 (26-75)||(458030-458079)
chr3 (26-75)||(10621998-10622047)
chr3 (26-75)||(27636083-27636132)
chr3 (26-75)||(42992033-42992082)
chr3 (26-75)||(51943122-51943171)
chr3 (26-75)||(53915953-53916002)
chr3 (27-70)||(53974034-53974077)
[»] chr7 (64 HSPs)
chr7 (28-125)||(12484976-12485074)
chr7 (28-125)||(12506407-12506505)
chr7 (18-155)||(12310471-12310608)
chr7 (91-162)||(443336-443407)
chr7 (91-162)||(3035425-3035496)
chr7 (91-162)||(7092687-7092758)
chr7 (91-162)||(7094934-7095005)
chr7 (91-162)||(7472493-7472564)
chr7 (91-162)||(11756935-11757006)
chr7 (91-162)||(18345247-18345318)
chr7 (91-162)||(20625744-20625815)
chr7 (91-162)||(20629635-20629706)
chr7 (91-162)||(20642054-20642125)
chr7 (91-162)||(37412635-37412706)
chr7 (28-125)||(12657600-12657698)
chr7 (91-163)||(21470802-21470874)
chr7 (91-162)||(3677007-3677078)
chr7 (91-162)||(20299165-20299236)
chr7 (91-162)||(28487259-28487330)
chr7 (91-162)||(38395996-38396067)
chr7 (91-162)||(47865338-47865409)
chr7 (91-162)||(1849675-1849746)
chr7 (91-162)||(7349786-7349857)
chr7 (91-162)||(7352165-7352236)
chr7 (91-162)||(7470540-7470611)
chr7 (91-162)||(24258168-24258239)
chr7 (91-162)||(31156419-31156490)
chr7 (91-162)||(42331512-42331583)
chr7 (96-162)||(21989863-21989929)
chr7 (91-155)||(38393700-38393764)
chr7 (91-162)||(1606181-1606252)
chr7 (91-158)||(28485275-28485342)
chr7 (91-166)||(10690680-10690754)
chr7 (26-85)||(43253986-43254045)
chr7 (41-125)||(6628853-6628938)
chr7 (109-162)||(20297108-20297161)
chr7 (89-162)||(40281907-40281982)
chr7 (24-75)||(1849745-1849796)
chr7 (26-75)||(1606251-1606300)
chr7 (26-75)||(3035495-3035544)
chr7 (26-75)||(7094886-7094935)
chr7 (26-75)||(7470492-7470541)
chr7 (26-75)||(11757005-11757054)
chr7 (26-75)||(20299235-20299284)
chr7 (26-75)||(20625814-20625863)
chr7 (26-75)||(20629705-20629754)
chr7 (26-75)||(20642124-20642173)
chr7 (26-75)||(28485341-28485390)
chr7 (26-75)||(31156371-31156420)
chr7 (26-75)||(47865408-47865457)
chr7 (26-75)||(7092639-7092688)
chr7 (26-75)||(7349738-7349787)
chr7 (26-75)||(7352117-7352166)
chr7 (26-75)||(21470754-21470803)
chr7 (26-75)||(28487329-28487378)
chr7 (26-75)||(38393763-38393812)
chr7 (26-75)||(38396066-38396115)
chr7 (119-159)||(43254024-43254064)
chr7 (24-75)||(24258238-24258289)
chr7 (26-72)||(21989934-21989980)
chr7 (18-72)||(40281853-40281907)
chr7 (26-75)||(443406-443455)
chr7 (26-75)||(13099936-13099985)
chr7 (26-70)||(18345322-18345366)
[»] chr5 (34 HSPs)
chr5 (89-162)||(18596336-18596409)
chr5 (91-162)||(25803717-25803788)
chr5 (91-162)||(27912229-27912300)
chr5 (91-162)||(15551935-15552006)
chr5 (91-162)||(18468708-18468779)
chr5 (91-162)||(26098760-26098831)
chr5 (91-162)||(27910145-27910216)
chr5 (92-162)||(26097431-26097501)
chr5 (94-162)||(17415822-17415890)
chr5 (91-162)||(3373549-3373620)
chr5 (91-162)||(18509826-18509897)
chr5 (91-162)||(18511721-18511792)
chr5 (91-160)||(21288541-21288610)
chr5 (89-162)||(6661950-6662023)
chr5 (91-152)||(10586549-10586610)
chr5 (93-162)||(40221292-40221361)
chr5 (91-166)||(5779146-5779221)
chr5 (26-85)||(18466443-18466502)
chr5 (18-76)||(17415763-17415821)
chr5 (26-75)||(3373501-3373550)
chr5 (26-75)||(10586609-10586658)
chr5 (26-75)||(18468778-18468827)
chr5 (26-75)||(25803787-25803836)
chr5 (27-75)||(27912299-27912347)
chr5 (119-162)||(15143230-15143273)
chr5 (18-85)||(15143252-15143319)
chr5 (119-162)||(18466421-18466464)
chr5 (26-75)||(15552005-15552054)
chr5 (26-75)||(18509778-18509827)
chr5 (26-75)||(18511673-18511722)
chr5 (26-75)||(27910215-27910264)
chr5 (77-125)||(2532736-2532784)
chr5 (26-73)||(26097503-26097550)
chr5 (18-85)||(32520231-32520300)
[»] scaffold1674 (1 HSPs)
scaffold1674 (91-162)||(14-85)
[»] scaffold0468 (1 HSPs)
scaffold0468 (91-162)||(2104-2175)
[»] scaffold0005 (3 HSPs)
scaffold0005 (91-162)||(51719-51790)
scaffold0005 (101-162)||(50169-50230)
scaffold0005 (36-101)||(170050-170115)
[»] scaffold0154 (2 HSPs)
scaffold0154 (91-158)||(11980-12047)
scaffold0154 (26-75)||(11932-11981)
[»] scaffold0511 (1 HSPs)
scaffold0511 (18-162)||(1745-1872)
[»] scaffold0031 (2 HSPs)
scaffold0031 (94-162)||(78893-78961)
scaffold0031 (26-70)||(78968-79012)
[»] scaffold0133 (2 HSPs)
scaffold0133 (95-160)||(4558-4623)
scaffold0133 (18-75)||(4626-4683)
[»] scaffold0008 (1 HSPs)
scaffold0008 (26-166)||(57859-57999)
[»] scaffold0533 (1 HSPs)
scaffold0533 (36-125)||(2173-2263)
[»] scaffold0809 (1 HSPs)
scaffold0809 (36-104)||(497-565)


Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 13785691 - 13785920
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13785691 aaatcttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 13785790  T
Q  118 catatttttagcgacaatattctccattcatcaaattttgagtcaattttgatgtgaatgaatgaataaactggctgcaaactcacgtgagtgattccga 217  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13785791 catatttttagcgacaatattctccatccatcaatttttgagtcaattttgatgtgaatgaatgaataaactggctgcaaactcacgtgagtgattccga 13785890  T
Q  218 ttcatttttacattgccttctgatgatgtc 247  Q
    ||||||||||||||||||||| ||||||||    
T  13785891 ttcatttttacattgccttcttatgatgtc 13785920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 32260888 - 32260742
Alignment:
Q  20 attttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatctttca 119  Q
    |||| |||||||||| |||||||||||||||| | |  ||||||||||||||||||||||| ||||  ||||||||||||||||| |||||| ||||| |    
T  32260888 atttgccttcatacggtacaaaaatatatttattgttcataaatatattttcagcaacaatcttctgaaaacacaaaatatattttaaacaattctttta 32260789  T
Q  120 tatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    |||||||||| ||||| |||| ||| |||||||||||||||||||||    
T  32260788 tatttttagcaacaatcttcttcatccatcaaattttgagtcaattt 32260742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 11693609 - 11693757
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| |||||||||||| |||||||||||||||| | || ||||||||||||||||||||||| || |  || ||| |||||||||| |||||||  |||    
T  11693609 aaatcttccttcatacggtacaaaaatatatttattgtccataaatatattttcagcaacaatcttttgaaagcacgaaatatatttaaaacaaaatttt 11693708  T
Q  118 catatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
     ||| ||||||| | ||| |||| ||| |||||||||||||||||||||    
T  11693709 tataattttagcaataatcttcttcatccatcaaattttgagtcaattt 11693757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 4131799 - 4131872
Alignment:
Q  89 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  4131799 aacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 4131872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 9459932 - 9460003
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  9459932 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 9460003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 9463759 - 9463830
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  9463759 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 9463830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 39931843 - 39931772
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  39931843 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 39931772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 46432555 - 46432626
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  46432555 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 46432626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 47906037 - 47905966
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  47906037 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 47905966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 48664933 - 48664862
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  48664933 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 48664862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 17325148 - 17325217
Alignment:
Q  93 caaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  17325148 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 17325217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 6997295 - 6997224
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||    
T  6997295 cacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtca 6997224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 24325428 - 24325357
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  24325428 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 24325357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 31736034 - 31736105
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||||||||||||||    
T  31736034 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccttccatcaaattttgagtca 31736105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 45693943 - 45694010
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttga 158  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||    
T  45693943 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttga 45694010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 6115636 - 6115701
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaatttt 156  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  6115636 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 6115701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 2949734 - 2949805
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||| |||||||||||||    
T  2949734 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatgaaattttgagtca 2949805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 15295358 - 15295429
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| | | |||||||||||||||||    
T  15295358 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 15295429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 27339649 - 27339720
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||| ||||||    
T  27339649 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccgtcaaatttggagtca 27339720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 28998763 - 28998834
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||| |||||||||||| ||| ||||||| |||||||||||||| |||||||||||||||||    
T  28998763 cacaaaatatattttaaacaaatcttttatagttttagcaacaatattctccatccatcaaattttgagtca 28998834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 29004479 - 29004550
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||| |||||||||||| ||| ||||||| |||||||||||||| |||||||||||||||||    
T  29004479 cacaaaatatattttaaacaaatcttttatagttttagcaacaatattctccatccatcaaattttgagtca 29004550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 27337451 - 27337522
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||| |||| |||||||||| ||||||    
T  27337451 cacaaaatatatttgaaacaaatcttatatatttttagcaacaatattccccatccatcaaatttggagtca 27337522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 10115599 - 10115517
Alignment:
Q  45 atatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatctttcatattttta 127  Q
    ||||||| | || ||||||||||||||| ||||||| || | ||| ||||||||||||||||||||||||||| |||||||||    
T  10115599 atatttattgtccataaatatattttcaacaacaatcttatggaagcacaaaatatatttgaaacaaatcttttatattttta 10115517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 21948702 - 21948755
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccat 144  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  21948702 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccat 21948755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 16561212 - 16561145
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttga 158  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||| ||| || ||||||||||    
T  16561212 cacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccaacaaattttga 16561145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 14352813 - 14352751
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaat 80  Q
    |||| |||||||||||| ||||||||||||||||||||  ||||||||||||||| |||||||    
T  14352813 aaatcttccttcatacggtacaaaaatatatttactattcataaatatattttcaacaacaat 14352751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 15295310 - 15295359
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  15295310 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 15295359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 21948654 - 21948703
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  21948654 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 21948703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 24325476 - 24325427
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  24325476 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 24325427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 27337403 - 27337452
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  27337403 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 27337452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 31735986 - 31736035
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  31735986 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 31736035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 39931891 - 39931842
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  39931891 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 39931842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 47906085 - 47906036
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  47906085 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 47906036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 6115589 - 6115637
Alignment:
Q  27 ttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||||||||||||||||||| | || ||||||||||||||||||    
T  6115589 ttcatacgatacaaaaatatatttattgtccataaatatattttcagca 6115637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 16855230 - 16855296
Alignment:
Q  61 aatatattttcagcaacaatattctagaaacac--aaaatatatttgaaacaaatctttcatatttt 125  Q
    |||||||||||||||||||| |||| ||| ||   |||||||||||||||||||||||| |||||||    
T  16855230 aatatattttcagcaacaatcttcttgaagcattaaaaatatatttgaaacaaatcttttatatttt 16855296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 2949686 - 2949735
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||| ||||||||||||||||| | || ||||||||||||||||||    
T  2949686 cttcatacaatacaaaaatatatttattgtccataaatatattttcagca 2949735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 9463711 - 9463760
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||| ||||||||||||| | || ||||||||||||||||||    
T  9463711 cttcatacgatataaaaatatatttattgtccataaatatattttcagca 9463760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 16561268 - 16561211
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||| |||||||||||| |||||||| ||||||| | || ||||||||||||||||||    
T  16561268 aaatattccttcatacggtacaaaaagatatttattgtcaataaatatattttcagca 16561211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 48664981 - 48664932
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||||    
T  48664981 cttcatacggtacaaaaatatatttattgtccataaatatattttcagca 48664932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 6996110 - 6996067
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaa 134  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||    
T  6996110 cacaaaatatatttgaaacaagtcttttatatttttagcaacaa 6996067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 6996158 - 6996109
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| ||||||||||||| || | || ||||||||||||||||||    
T  6996158 cttcatacggtacaaaaatatatgtattgtccataaatatattttcagca 6996109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 17325099 - 17325144
Alignment:
Q  27 ttcatacgatacaaaaatatatttactatctataaatatattttca 72  Q
    |||||||| |||||||||||||||| | || |||||||||||||||    
T  17325099 ttcatacggtacaaaaatatatttattgtccataaatatattttca 17325144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 27339597 - 27339638
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatat 67  Q
    |||||||||||||||||||||||||| | || ||||||||||    
T  27339597 cttcatacgatacaaaaatatatttattgtccataaatatat 27339638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 45693895 - 45693939
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatatttt 70  Q
    ||||||||| |||||||||||||||| | || |||||||||||||    
T  45693895 cttcatacggtacaaaaatatatttattgtccataaatatatttt 45693939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 5516700 - 5516843
Alignment:
Q  23 ttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatctttcatat 122  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| || ||| | ||||| |||||||||||||||||| || || ||||    
T  5516700 ttccttcatacgataaaaaaatatatttattatctataaatatatttttagcaacgatcttccaaaaacataaaatatatttgaaacaattcatttatat 5516799  T
Q  123 ttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    ||||||| |||||||||||||||||||||||||| | |||||||    
T  5516800 ttttagcaacaatattctccattcatcaaattttaaatcaattt 5516843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 29609843 - 29609983
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| |||||||||||| |||||||||||||||||| |  ||||||||||||||| ||||||| |||||||| |||||||||||||||||| |||||       
T  29609843 aaatcttccttcatacggtacaaaaatatatttactcttcataaatatattttcatcaacaatcttctagaagcacaaaatatatttgaaaaaaatcaag 29609942  T
Q  118 catatttttagcgacaatattctccattcatcaaattttga 158  Q
     ||| ||||||| |||||||||| ||| |||||||||||||    
T  29609943 aatacttttagcaacaatattcttcatccatcaaattttga 29609983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 38209160 - 38209264
Alignment:
Q  63 tatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||| ||||||| |||| ||| |||||||||||||| |||||||||||| ||||||||| | |||||||| | ||| |||||||||||||||||    
T  38209160 tatattttcaacaacaatcttcttgaagcacaaaatatatttaaaacaaatcttttatatttttaacaacaatatttttcatccatcaaattttgagtca 38209259  T
Q  163 atttt 167  Q
    |||||    
T  38209260 atttt 38209264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 22135138 - 22135209
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  22135138 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 22135209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 24348040 - 24347969
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  24348040 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 24347969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 56030270 - 56030199
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  56030270 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 56030199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 5100824 - 5100753
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  5100824 cacaaaatatatttaaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 5100753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 14787940 - 14788011
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||    
T  14787940 cacaaaatatatttgaaacaaatcttttatatttttagcaacattattctccatccatcaaattttgagtca 14788011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 22132906 - 22132973
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttga 158  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||    
T  22132906 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttga 22132973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 38890624 - 38890691
Alignment:
Q  95 aaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  38890624 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 38890691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 47211227 - 47211298
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||    
T  47211227 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttaagtca 47211298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 30136396 - 30136331
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaatttt 156  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  30136396 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccattcatcaaatttt 30136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 10979733 - 10979626
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| |||||||||||   ||||||||||||||  | || ||||||||||||||||||||||| |||| ||| |||||||||||||||||  ||||||||    
T  10979733 aaatcttccttcatacagcacaaaaatatatttgttgtccataaatatattttcagcaacaatcttcttgaagcacaaaatatatttgaagtaaatcttt 10979634  T
Q  118 catatttt 125  Q
     |||||||    
T  10979633 tatatttt 10979626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 44600347 - 44600418
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||||||    
T  44600347 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtca 44600418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 17662745 - 17662809
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattt 155  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  17662745 cacaaaatatatttaaaacaaatcttttatatttttagcaacaatattctccatccatcaaattt 17662809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 54929123 - 54929271
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaa--acacaaaatatatttgaaacaaatct 115  Q
    |||| |||||||||||| |||||||||||||||  | || ||||||||||||||||||| ||| |||   ||  |||||||||| |||| || |||||||    
T  54929123 aaatcttccttcatacggtacaaaaatatattttttgtccataaatatattttcagcaataatcttccgaaagcacacaaaatacatttaaatcaaatct 54929222  T
Q  116 ttcatatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    || ||||||||||| |||||||| |   | ||||||||||| |||||||||    
T  54929223 tttatatttttagcaacaatattat--ttccatcaaattttaagtcaattt 54929271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 14789500 - 14789561
Alignment:
Q  101 atttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||| ||||||||||| ||| |||||| ||| |||||||||||||||||    
T  14789500 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtca 14789561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 19322487 - 19322418
Alignment:
Q  94 aaaatatatttgaaacaaatctttcatatttttagc-gacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||| |||||||||||| |||||||||||  | |||||||||||| |||||||||||||||||    
T  19322487 aaaatatatttaaaacaaatcttttatatttttagcaaaaaatattctccatccatcaaattttgagtca 19322418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 10112759 - 10112702
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||| ||||||||||||||||||||||||||||| | || ||||||||| ||||||||    
T  10112759 aaatcttccttcatacgatacaaaaatatatttattgtccataaatatagtttcagca 10112702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 22132858 - 22132907
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  22132858 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 22132907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 22135090 - 22135139
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  22135090 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 22135139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 44600299 - 44600348
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  44600299 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 44600348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 10112703 - 10112636
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||||    |||| ||||||||||| |||||||||| |||||| |||||||| |||||    
T  10112703 cacaaaatatatttgaaac----cttttatatttttagcaacaatattcttcattcaacaaattttaagtca 10112636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 32274322 - 32274364
Alignment:
Q  62 atatattttcagcaacaatattctagaaacacaaaatatattt 104  Q
    ||||||||||||||||||| |||||||| ||||||||||||||    
T  32274322 atatattttcagcaacaattttctagaagcacaaaatatattt 32274364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 14647175 - 14647240
Alignment:
Q  36 tacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatata 101  Q
    |||||||||||||||  | || || |||||||||||||||||||| || ||||| |||||||||||    
T  14647175 tacaaaaatatatttgttgtccatgaatatattttcagcaacaattttttagaagcacaaaatata 14647240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 56030318 - 56030269
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||||    
T  56030318 cttcatacggtacaaaaatatatttattgtccataaatatattttcagca 56030269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 47211179 - 47211223
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatatttt 70  Q
    |||||||||||||||||||||||||| | || |||||||||||||    
T  47211179 cttcatacgatacaaaaatatatttattgtccataaatatatttt 47211223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 55359200 - 55359244
Alignment:
Q  58 ataaatatattttcagcaacaatattctagaaacacaaaatatat 102  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||    
T  55359200 ataattatattttcaacaacaatcttctagaaacacaaaatatat 55359244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 9863580 - 9863509
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||| ||||||||||||| || ||||||||||  |||||||  | ||| || ||||||||||||||    
T  9863580 cacaaaatatgtttgaaacaaatcatttatatttttagtaacaatatatttcatccaacaaattttgagtca 9863509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 5100872 - 5100823
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| |||||||||||||||  | || ||||||||||||||||||    
T  5100872 cttcatacggtacaaaaatatatttgttgtccataaatatattttcagca 5100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 24348087 - 24348042
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttc 71  Q
    |||||||| ||||||||||||||||| | || ||||||||||||||    
T  24348087 cttcatacaatacaaaaatatatttattgtccataaatatattttc 24348042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 30136444 - 30136395
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||  |||||||||||||||| | || ||||||||||||||||||    
T  30136444 cttcatacagtacaaaaatatatttattgtccataaatatattttcagca 30136395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 38890588 - 38890633
Alignment:
Q  24 tccttcatacgatacaaaaatatatttactatctataaatatattt 69  Q
    |||||||||| ||||||||||||||||| | || ||||||||||||    
T  38890588 tccttcatacaatacaaaaatatatttattgtccataaatatattt 38890633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 8e-36; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 13986231 - 13986378
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| ||| ||||| || ||||||||| |||| |||||| ||||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||    
T  13986231 aaatcttctttcatgcggtacaaaaatttattaactatccataaatatattttcaacaacaatcttctagaaccacaaaatatatttaaaacaaatcttt 13986330  T
Q  118 catatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
     ||||||||||| ||||| |||| ||| ||| |||||||||||||||||    
T  13986331 -atatttttagcaacaatcttcttcatccataaaattttgagtcaattt 13986378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 15809045 - 15808972
Alignment:
Q  89 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  15809045 aacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 15808972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 3265671 - 3265742
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  3265671 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 3265742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 3873831 - 3873760
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  3873831 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 3873760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 32339175 - 32339104
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  32339175 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 32339104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 43529952 - 43529881
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  43529952 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 43529881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 28283732 - 28283803
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||    
T  28283732 cacaaaatatatttgaaacaaatcttttatatttttagcaaaaatattctccatccatcaaattttgagtca 28283803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 41384571 - 41384503
Alignment:
Q  94 aaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  41384571 aaaatatattcgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 41384503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 608551 - 608482
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagt 160  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| | | |||||||||||||||    
T  608551 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagt 608482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 41382497 - 41382429
Alignment:
Q  94 aaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||| ||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||    
T  41382497 aaaatatattcgaaacaaatcttttatatttttaacaacaatattctccatccatcaaattttgagtca 41382429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 608601 - 608550
Alignment:
Q  24 tccttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  608601 tccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 608550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 30679163 - 30679260
Alignment:
Q  70 tcagcaacaatattctagaa--acacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    ||||||||||| |||| |||  ||||||||||||| | ||||||||||||  |||||||| | ||| |||||| ||| |||||||||||||||||||||    
T  30679163 tcagcaacaatcttctggaagcacacaaaatatatctaaaacaaatcttttttatttttaccaaca-tattcttcatccatcaaattttgagtcaattt 30679260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 3873879 - 3873830
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  3873879 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 3873830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 28283684 - 28283733
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  28283684 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 28283733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 32339223 - 32339174
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  32339223 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 32339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 11701401 - 11701457
Alignment:
Q  29 catacgatacaaaaatatatttactatctataaatatattttcagcaacaatattct 85  Q
    |||||| ||||||||||||||||||  | ||||||||||||||||||||||| ||||    
T  11701401 catacggtacaaaaatatatttactgaccataaatatattttcagcaacaatcttct 11701457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 15809091 - 15809045
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttca 72  Q
    |||||||||||||||||||||||||| | || |||||||||||||||    
T  15809091 cttcatacgatacaaaaatatatttattgtccataaatatattttca 15809045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 27820121 - 27820175
Alignment:
Q  63 tatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    ||||||||| | | |||| ||||| ||||||||||||||||||||||||||||||    
T  27820121 tatattttcggtaccaatcttctaaaaacacaaaatatatttgaaacaaatcttt 27820175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 43530000 - 43529951
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||| ||||||||||||||||| | || ||||||||||||||||||    
T  43530000 cttcatacaatacaaaaatatatttattgtccataaatatattttcagca 43529951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 41384622 - 41384575
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcag 73  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||    
T  41384622 cttcatacggtacaaaaatatatttattgtccataaatatattttcag 41384575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 41382547 - 41382501
Alignment:
Q  27 ttcatacgatacaaaaatatatttactatctataaatatattttcag 73  Q
    |||||||| |||||||||||||||| | || ||||||||||||||||    
T  41382547 ttcatacggtacaaaaatatatttattgtccataaatatattttcag 41382501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 21006613 - 21006560
Alignment:
Q  52 ctatctataaatatattttcagcaacaatattctagaaacacaaaatatatttg 105  Q
    ||||| |||| |||||||||| ||||||| || ||||| |||||||||||||||    
T  21006613 ctatccataattatattttcaacaacaatcttttagaagcacaaaatatatttg 21006560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 15693726 - 15693579
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| |||||||||||| |||||||||||||||| |  | ||||||||||||||||||||||  || | ||| |||||||||||||||||||||||||||    
T  15693726 aaatcttccttcatacggtacaaaaatatatttattgcccataaatatattttcagcaacaagtttttggaagcacaaaatatatttgaaacaaatcttt 15693627  T
Q  118 catatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
     ||||||||||| |||||||| | ||| ||||||||||| |||||||||    
T  15693626 -atatttttagcaacaatattattcatccatcaaattttaagtcaattt 15693579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 41303483 - 41303627
Alignment:
Q  23 ttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatctttcata- 121  Q
    |||||||| ||| ||||||| |||||||||| || ||||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||| |||     
T  41303483 ttccttcacacggtacaaaattatatttactgtccataaatatattttcagcaacaatcttatggaagcacaaaatatatttgaaacaaatcttttatat 41303582  T
Q  122 tttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    |||||||| ||||| |||| ||| ||||||||| |||||||||||    
T  41303583 tttttagcaacaatcttcttcatccatcaaattctgagtcaattt 41303627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 41304828 - 41304968
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| |||||||||| | ||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||| |||||||||||||||  ||||||||||    
T  41304828 aaatcttccttcatatg-tacaaaaatatatttactatccataaatatattgtcagcaacaatcttctggaagcacaaaatatatttg--acaaatcttt 41304924  T
Q  118 catatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
     |||||||||     ||| |||| ||| |||||||||||||||||||||    
T  41304925 tatattttta-----aatcttcttcatccatcaaattttgagtcaattt 41304968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 39287028 - 39286884
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| ||| |||||| | |||||||||||||||| | || ||||||||||||| ||||||||| |||| ||| || ||||||||||||||||||||| ||    
T  39287028 aaatcttcattcatatggtacaaaaatatatttattgtccataaatatattttaagcaacaatcttctggaatcataaaatatatttgaaacaaatcatt 39286929  T
Q  118 catatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
     ||||||||||| ||||| |    ||| ||||||||||||| |||||||    
T  39286928 tatatttttagcaacaatct----catccatcaaattttgaatcaattt 39286884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 42924013 - 42924084
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  42924013 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 42924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 23452751 - 23452819
Alignment:
Q  94 aaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  23452751 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 23452819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 35216103 - 35216174
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||    
T  35216103 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtca 35216174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 35218484 - 35218555
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||    
T  35218484 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtca 35218555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 27136422 - 27136495
Alignment:
Q  89 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||||||||| ||| |||||||||||||||||    
T  27136422 aacacaaaatatatttgaaacaaatcttttatatttttagcaccaatattcttcatccatcaaattttgagtca 27136495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 27583826 - 27583897
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||| |||||||||    
T  27583826 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaaatttgagtca 27583897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 42452530 - 42452459
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||| |||||    
T  42452530 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttaagtca 42452459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 28568670 - 28568744
Alignment:
Q  92 acaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||||| |||  ||||||||||||||||||||    
T  28568670 acaaaatatatttgaaacaaatcttttatagttttagcaacaatattcttcatctatcaaattttgagtcaattt 28568744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 28568411 - 28568342
Alignment:
Q  97 atatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    ||||||||||||||||||||| ||||||||| | |||||||||| ||| |||||||||||||||||||||    
T  28568411 atatatttgaaacaaatcttttatatttttaacaacaatattcttcatccatcaaattttgagtcaattt 28568342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 34575622 - 34575693
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||  ||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||    
T  34575622 cacaaaatatatttagaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtca 34575693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 42452578 - 42452529
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  42452578 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 42452529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 23452698 - 23452749
Alignment:
Q  24 tccttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||||| | || |||||| |||||||||||    
T  23452698 tccttcatacgatacaaaaatatatttattgtccataaatttattttcagca 23452749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 28568613 - 28568667
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttca 72  Q
    |||| |||||||| |||||||||||||||||||| | || |||||||||||||||    
T  28568613 aaatcttccttcacacgatacaaaaatatatttattgtccataaatatattttca 28568667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 35216059 - 35216104
Alignment:
Q  30 atacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||| | || ||||||||||||||||||    
T  35216059 atacgatacaaaaatatatttattgtccataaatatattttcagca 35216104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 35218440 - 35218485
Alignment:
Q  30 atacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||| | || ||||||||||||||||||    
T  35218440 atacgatacaaaaatatatttattgtccataaatatattttcagca 35218485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 42923965 - 42924014
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||||    
T  42923965 cttcatacggtacaaaaatatatttattgtccataaatatattttcagca 42924014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 27136367 - 27136411
Alignment:
Q  25 ccttcatacgatacaaaaatatatttactatctataaatatattt 69  Q
    |||||||||| |||||||||||||||| | || ||||||||||||    
T  27136367 ccttcatacggtacaaaaatatatttattttccataaatatattt 27136411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 30445375 - 30445225
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| |||||||||| | |||||||||||||||| | |  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||    
T  30445375 aaatcttccttcatatggtacaaaaatatatttattgttcataaatatattttcagcaacaatattctggaagcacaaaatatatttgaaacaaatattt 30445276  T
Q  118 catatttttagcgacaatattctccattcatc--aaattttgagtcaattt 166  Q
     |||||| |||| |||||||||| ||| ||||  | |||||||||||||||    
T  30445275 tatatttctagcaacaatattcttcatccatcatagattttgagtcaattt 30445225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 30443166 - 30443018
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| |||||| ||||| |||||| ||||||||  | || ||||||||||||||||||||||| |||| ||| || |||||||||||||||||||||| |    
T  30443166 aaatcttcctttatacggtacaaacatatattt--tgtccataaatatattttcagcaacaatcttctggaagcaaaaaatatatttgaaacaaatctct 30443069  T
Q  118 catatttttagcgacaatattctccattcatc--aaattttgagtcaattt 166  Q
     ||||||||| | |||||||||| ||| ||||  |||||||||||||||||    
T  30443068 tatatttttaacaacaatattcttcatccatcataaattttgagtcaattt 30443018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 30035115 - 30035186
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  30035115 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 30035186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 5275847 - 5275918
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  5275847 cacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 5275918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 2629398 - 2629469
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| | | |||||||||||||||||    
T  2629398 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 2629469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 12196023 - 12196094
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||||||    
T  12196023 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtca 12196094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 26933077 - 26933148
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||||||    
T  26933077 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtca 26933148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 30967004 - 30966933
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||| ||||||    
T  30967004 cacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaatttggagtca 30966933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 18317888 - 18317761
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| ||||||||||||||||||||||||||||| | || ||||||||||||||||||                 |||||||||||||||||||||||||    
T  18317888 aaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagca-----------------caaaatatatttgaaacaaatcttt 18317806  T
Q  118 catatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
     ||||||||||| |||||||||| | | | |||||||||||||||    
T  18317805 tatatttttagcaacaatattcttcttccttcaaattttgagtca 18317761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 20526624 - 20526556
Alignment:
Q  94 aaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| ||  |||||||||||||||||    
T  20526624 aaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcacccatcaaattttgagtca 20526556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 19705084 - 19705155
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||| |||||||||||||||| ||||||||||| |||||||||| | | |||||||||||||||||    
T  19705084 cacaaaatatctttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 19705155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 19705034 - 19705085
Alignment:
Q  24 tccttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  19705034 tccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 19705085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 22858455 - 22858526
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||| ||||||| |||||||||||| |||||||||   |||||||||| ||| |||||||||||||||||    
T  22858455 cacaaagtatatttaaaacaaatcttttatatttttattaacaatattcttcatccatcaaattttgagtca 22858526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 17852341 - 17852277
Alignment:
Q  99 atatttgaaacaaatctttcatatttttagc--gacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||| |||||||||||   ||||||||||||| ||||||||||||||||||    
T  17852341 atatttgaaacaaatcttttatatttttagcaacacaatattctcca-tcatcaaattttgagtca 17852277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 2629350 - 2629399
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  2629350 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 2629399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 5275799 - 5275848
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  5275799 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 5275848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 12195975 - 12196024
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  12195975 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 12196024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 30035067 - 30035111
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatatttt 70  Q
    |||||||||||||||||||||||||| | ||||||||||||||||    
T  30035067 cttcatacgatacaaaaatatatttattgtctataaatatatttt 30035111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 13280707 - 13280640
Alignment:
Q  58 ataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatctttcatatttt 125  Q
    |||| |||||||||| ||||||| ||||| ||||||||||||||||| || ||||||| | |||||||    
T  13280707 ataattatattttcatcaacaatcttctataaacacaaaatatattttaaccaaatctattatatttt 13280640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 30967052 - 30967003
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||| ||||||||||||||||| | || ||||||||||||||||||    
T  30967052 cttcatacaatacaaaaatatatttattgtccataaatatattttcagca 30967003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 22858408 - 22858456
Alignment:
Q  27 ttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||| |||||||||||||||| | || ||||||||||||||||||    
T  22858408 ttcatacggtacaaaaatatatttattgtccataaatatattttcagca 22858456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 12158571 - 12158524
Alignment:
Q  119 atatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    ||||||||||| ||||| |||| ||||||||||||||||| |||||||    
T  12158571 atatttttagcaacaatcttcttcattcatcaaattttgactcaattt 12158524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 12747239 - 12747280
Alignment:
Q  63 tatattttcagcaacaatattctagaaacacaaaatatattt 104  Q
    ||||||||||||| |||| |||||||| ||||||||||||||    
T  12747239 tatattttcagcagcaatcttctagaagcacaaaatatattt 12747280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 17852395 - 17852346
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||| | |||||||||||||||| | || ||||||||||||||||||    
T  17852395 cttcataaggtacaaaaatatatttattgtccataaatatattttcagca 17852346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 13484340 - 13484384
Alignment:
Q  58 ataaatatattttcagcaacaatattctagaaacacaaaatatat 102  Q
    ||||||||||||||||||||||| ||| | || ||||||||||||    
T  13484340 ataaatatattttcagcaacaatcttccaaaagcacaaaatatat 13484384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 11072776 - 11072640
Alignment:
Q  30 atacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatctttcatatttttagc 129  Q
    ||||| ||||||||| |||||  | || |||||| |||||||||||||||| |||| ||| ||||| |||||||||||||||||| || |||||||| ||    
T  11072776 atacggtacaaaaatctatttgttgtccataaatgtattttcagcaacaatcttctggaagcacaagatatatttgaaacaaatcatttatattttttgc 11072677  T
Q  130 gacaatattctccattcatcaaattttgagtcaattt 166  Q
     ||||| |||| ||| |||||||||||||||||||||    
T  11072676 aacaatcttcttcatccatcaaattttgagtcaattt 11072640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 53918167 - 53918240
Alignment:
Q  89 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  53918167 aacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 53918240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 746503 - 746432
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  746503 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 746432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 41848885 - 41848814
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  41848885 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 41848814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 53974103 - 53974201
Alignment:
Q  68 tttcagcaacaatattctagaaacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    ||||||||||||| |||| ||| ||||||||||| ||||||||||||||| ||||||||| | |||| ||||| ||| |||||||||||||||||||||    
T  53974103 tttcagcaacaatcttctggaagcacaaaatataattgaaacaaatcttttatatttttaacaacaacattcttcatccatcaaattttgagtcaattt 53974201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 54287505 - 54287627
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| |||||||||||  ||||||||| |||||| |||| ||||||||||||||| || |||| || | ||| ||| |||||||||||||||||||||||    
T  54287505 aaatattccttcatacagtacaaaaatgtatttattatccataaatatattttcaacagcaatcttttggaagcacgaaatatatttgaaacaaatcttt 54287604  T
Q  118 catatttttagcgacaatattct 140  Q
     ||||||||||| ||||| ||||    
T  54287605 tatatttttagcaacaatcttct 54287627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 1313165 - 1313092
Alignment:
Q  89 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||||||    
T  1313165 aacacaaaatatatttgaaacaaatcatttatatttttagcaacaatattctccatccatcaaattttgagtca 1313092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 25533236 - 25533117
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatctttcatatttt 125  Q
    |||||||||||||||||||||||||| | || |||||||||||||||||||                 |||||||||||||||||||||||| |||||||    
T  25533236 cttcatacgatacaaaaatatatttattgtccataaatatattttcagcaa-----------------aaaatatatttgaaacaaatcttttatatttt 25533154  T
Q  126 tagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||| |||||||||||||| |||||||||||||||||    
T  25533153 tagcaacaatattctccatccatcaaattttgagtca 25533117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 455654 - 455583
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||||||    
T  455654 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattccccatccatcaaattttgagtca 455583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 458031 - 457960
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||||||    
T  458031 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattccccatccatcaaattttgagtca 457960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 10622046 - 10622117
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  10622046 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 10622117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 51943123 - 51943052
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||    
T  51943123 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtca 51943052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 53916001 - 53916072
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||    
T  53916001 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccctcaaattttgagtca 53916072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 11066400 - 11066251
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| |||||||||| | || ||||||||||||| | || |||||| |||||||| ||||||| |||   || ||||| |||||||||||||||||| ||    
T  11066400 aaatattccttcatatggtaaaaaaatatatttattgtccataaatgtattttcaacaacaatcttccgaaagcacaagatatatttgaaacaaatcatt 11066301  T
Q  118 cat-atttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
     ||  |||||||| |||||||||| ||| ||||||||| |||||||||||    
T  11066300 tatcttttttagcaacaatattcttcatccatcaaattatgagtcaattt 11066251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 42990030 - 42989962
Alignment:
Q  94 aaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  42990030 aaaatatatttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttgagtca 42989962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 42992034 - 42991963
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||||||| |||| ||||||||| | |||||||||||||| |||||||||||||||||    
T  42992034 cacaaaatatatttgaaacaaaccttttatatttttaacaacaatattctccatccatcaaattttgagtca 42991963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 27636131 - 27636196
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaatttt 156  Q
    ||||||||||||||||||| ||| ||| ||||||||||| |||||||||||||| |||||||||||    
T  27636131 cacaaaatatatttgaaactaatattttatatttttagcaacaatattctccatccatcaaatttt 27636196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 4104409 - 4104473
Alignment:
Q  98 tatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||||| ||||||||||| |||||||||| | | |||||||||||||||||    
T  4104409 tatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 4104473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 6561687 - 6561623
Alignment:
Q  98 tatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||| ||||||    
T  6561687 tatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaatttcgagtca 6561623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 4104352 - 4104403
Alignment:
Q  24 tccttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  4104352 tccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 4104403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 12019267 - 12019168
Alignment:
Q  28 tcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaa-tatatttgaaacaaatctttcatattttt 126  Q
    ||||||||||| |||||||||||  | || ||||||||| ||| ||||||||| | || ||||| ||||| ||||||||||||||||||||  |||||||    
T  12019267 tcatacgatactaaaatatatttgatgtccataaatataattttagcaacaatctccttgaaacgcaaaattatatttgaaacaaatcttttctattttt 12019168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 746551 - 746502
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  746551 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 746502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 5535882 - 5535982
Alignment:
Q  28 tcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaaca-caaaatatatttgaa--acaaatctttcatattt 124  Q
    |||||||||||||| |||| ||| || || ||||||||||||||||||||||| | || ||| ||  ||||||||||||||  |||||||||| ||||||    
T  5535882 tcatacgatacaaatatatcttttctgtccataaatatattttcagcaacaatctccttgaagcataaaaatatatttgaaacacaaatcttttatattt 5535981  T
Q  125 t 125  Q
    |    
T  5535982 t 5535982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 41848933 - 41848884
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  41848933 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 41848884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 42990081 - 42990031
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagcaa 76  Q
    |||||||||||||||||||||||||| | || ||||||||| |||||||||    
T  42990081 cttcatacgatacaaaaatatatttattgtccataaatatactttcagcaa 42990031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 455702 - 455653
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || | ||||||||||||||||    
T  455702 cttcatacgatacaaaaatatatttattgtccacaaatatattttcagca 455653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 458079 - 458030
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || | ||||||||||||||||    
T  458079 cttcatacgatacaaaaatatatttattgtccacaaatatattttcagca 458030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 10621998 - 10622047
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || |||||||||| |||||||    
T  10621998 cttcatacgatacaaaaatatatttattgtccataaatatatcttcagca 10622047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 27636083 - 27636132
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||||    
T  27636083 cttcatacggtacaaaaatatatttattgtccataaatatattttcagca 27636132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 42992082 - 42992033
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||| ||||||||||||||||| | || ||||||||||||||||||    
T  42992082 cttcatacaatacaaaaatatatttattgtccataaatatattttcagca 42992033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 51943171 - 51943122
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||||    
T  51943171 cttcatacggtacaaaaatatatttattgtccataaatatattttcagca 51943122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 53915953 - 53916002
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||||    
T  53915953 cttcatacggtacaaaaatatatttattgtccataaatatattttcagca 53916002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 53974034 - 53974077
Alignment:
Q  27 ttcatacgatacaaaaatatatttactatctataaatatatttt 70  Q
    |||||||| |||||||||||||||| | ||||||||||||||||    
T  53974034 ttcatacggtacaaaaatatatttattgtctataaatatatttt 53974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 12484976 - 12485074
Alignment:
Q  28 tcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacaca-aaatatatttgaaacaaatctttcatatttt 125  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | || ||| |||| ||||||||||||||||||||||| |||||||    
T  12484976 tcatacgatacaaaaatatatttgctatccataaatatattttcagcaacaatctccttgaagcacacaaatatatttgaaacaaatcttttatatttt 12485074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 12506407 - 12506505
Alignment:
Q  28 tcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacaca-aaatatatttgaaacaaatctttcatatttt 125  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | || ||| |||| ||||||||||||||||||||||| |||||||    
T  12506407 tcatacgatacaaaaatatatttgctatccataaatatattttcagcaacaatctccttgaagcacacaaatatatttgaaacaaatcttttatatttt 12506505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 12310471 - 12310608
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| |||||||||||| |||||||||||||| ||| ||  ||| |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  12310471 aaatcttccttcatacggtacaaaaatatattaactgtccttaagtataatttcagcaacaatcttctagaagcacaaaatatatttgaaacaaatcttt 12310570  T
Q  118 catatttttagcgacaatattctccattcatcaaattt 155  Q
     ||||   |||| ||||| |||| ||| ||| ||||||    
T  12310571 tatatcagtagcaacaatcttcttcatccattaaattt 12310608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 443407 - 443336
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  443407 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 443336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 3035496 - 3035425
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  3035496 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 3035425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 7092687 - 7092758
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  7092687 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 7092758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 7094934 - 7095005
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  7094934 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 7095005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 7472493 - 7472564
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  7472493 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 7472564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 11757006 - 11756935
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  11757006 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 11756935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 18345318 - 18345247
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  18345318 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 18345247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 20625815 - 20625744
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  20625815 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20625744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 20629706 - 20629635
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  20629706 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20629635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 20642125 - 20642054
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  20642125 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20642054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 37412635 - 37412706
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  37412635 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 37412706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 12657600 - 12657698
Alignment:
Q  28 tcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacac-aaaatatatttgaaacaaatctttcatatttt 125  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||||||||| | || ||| ||| |||||||||||||||||||||||| |||||||    
T  12657600 tcatacgatacaaaaatatatttgctatccatgaatatattttcagcaacaatctccttgaagcacaaaaatatatttgaaacaaatcttttatatttt 12657698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 21470802 - 21470874
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtcaa 163  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| |||||||    
T  21470802 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcaa 21470874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 3677078 - 3677007
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||    
T  3677078 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatctatcaaattttgagtca 3677007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 20299236 - 20299165
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  20299236 cacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20299165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 28487330 - 28487259
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  28487330 cacaaaatatatttgaagcaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 28487259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 38396067 - 38395996
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||||    
T  38396067 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtca 38395996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 47865409 - 47865338
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||||    
T  47865409 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtca 47865338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 1849746 - 1849675
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| | | |||||||||||||||||    
T  1849746 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 1849675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 7349786 - 7349857
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||||||    
T  7349786 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtca 7349857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 7352165 - 7352236
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||||||    
T  7352165 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtca 7352236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 7470540 - 7470611
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||| ||| ||||||||||| | |||||||||||| |||||||||||||||||    
T  7470540 cacaaaatatatttgaaacaaatgttttatatttttagcaataatattctccatccatcaaattttgagtca 7470611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 24258239 - 24258168
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| | | |||||||||||||||||    
T  24258239 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 24258168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 31156419 - 31156490
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||||||    
T  31156419 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtca 31156490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 42331512 - 42331583
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||    
T  42331512 cacaaaatatatttaaaacaaatcttttatatttttagcaacaatattcttcattcatcaaattttaagtca 42331583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 21989929 - 21989863
Alignment:
Q  96 aatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||    
T  21989929 aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgggtca 21989863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 38393764 - 38393700
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattt 155  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||    
T  38393764 cacaaaatatatttgaaacaaatcttatatatttttagcaacaatattctccatccatcaaattt 38393700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 1606252 - 1606181
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||| | | |||||||||||||||||    
T  1606252 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 1606181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 28485342 - 28485275
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttga 158  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||| ||| |||||||||||||    
T  28485342 cacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaaattttga 28485275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 10690754 - 10690680
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    |||||||||||||||||||| | |||| ||||||||||| ||||| |||||| | |||||||||||||||||||||    
T  10690754 cacaaaatatatttgaaacata-cttttatatttttagcaacaatcttctccctccatcaaattttgagtcaattt 10690680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 43253986 - 43254045
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattct 85  Q
    |||||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||    
T  43253986 cttcatacgatacaaaaatatatttattgtccataaatatatttttagcaacaatattct 43254045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 6628938 - 6628853
Alignment:
Q  41 aaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaa-tatatttgaaacaaatctttcatatttt 125  Q
    ||||||||||  | |||||||||||||||| ||||||||| | || ||| ||||||| |||||||||||||||||||| |||||||    
T  6628938 aaatatatttgttgtctataaatatatttttagcaacaatctccttgaagcacaaaaatatatttgaaacaaatcttttatatttt 6628853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 20297161 - 20297108
Alignment:
Q  109 caaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  20297161 caaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20297108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 40281907 - 40281982
Alignment:
Q  89 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaa--tattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||  | |||| ||| |||||||||||||||||    
T  40281907 aacacaaaatatatttgaaacaaatattttatatttttagcaacaaattcttcttcatccatcaaattttgagtca 40281982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 1849796 - 1849745
Alignment:
Q  24 tccttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  1849796 tccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 1849745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 1606300 - 1606251
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  1606300 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 1606251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 3035544 - 3035495
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  3035544 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 3035495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 7094886 - 7094935
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  7094886 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 7094935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 7470492 - 7470541
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  7470492 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 7470541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 11757054 - 11757005
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  11757054 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 11757005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 20299284 - 20299235
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  20299284 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 20299235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 20625863 - 20625814
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  20625863 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 20625814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 20629754 - 20629705
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  20629754 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 20629705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 20642173 - 20642124
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  20642173 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 20642124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 28485390 - 28485341
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  28485390 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 28485341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 31156371 - 31156420
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  31156371 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 31156420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 47865457 - 47865408
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  47865457 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 47865408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 7092639 - 7092688
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || |||||||||| |||||||    
T  7092639 cttcatacgatacaaaaatatatttattgtccataaatatatcttcagca 7092688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 7349738 - 7349787
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||| ||||||||||||||||||| | || ||||||||||||||||||    
T  7349738 cttcatgcgatacaaaaatatatttattgtccataaatatattttcagca 7349787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 7352117 - 7352166
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||| ||||||||||||||||||| | || ||||||||||||||||||    
T  7352117 cttcatgcgatacaaaaatatatttattgtccataaatatattttcagca 7352166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 21470754 - 21470803
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||| ||||||||||||| | || ||||||||||||||||||    
T  21470754 cttcatacgatataaaaatatatttattgtccataaatatattttcagca 21470803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 28487378 - 28487329
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||||||||||| |||||||| | || ||||||||||||||||||    
T  28487378 cttcatacgatacaaaattatatttattgtccataaatatattttcagca 28487329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 38393812 - 38393763
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||| ||||||||||    
T  38393812 cttcatacgatacaaaaatatatttattgtccataaataaattttcagca 38393763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 38396115 - 38396066
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | |  ||||||||||||||||||    
T  38396115 cttcatacgatacaaaaatatatttattgtacataaatatattttcagca 38396066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 43254024 - 43254064
Alignment:
Q  119 atatttttagcgacaatattctccattcatcaaattttgag 159  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  43254024 atatttttagcaacaatattctccatccatcaaattttgag 43254064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 24258289 - 24258238
Alignment:
Q  24 tccttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||||  |||||||||||||||| | || ||||||||||||||||||    
T  24258289 tccttcatactgtacaaaaatatatttattgtccataaatatattttcagca 24258238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 21989980 - 21989934
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttca 72  Q
    ||||||||| |||||||||||||||| | || |||||||||||||||    
T  21989980 cttcatacggtacaaaaatatatttattgtccataaatatattttca 21989934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 40281853 - 40281907
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttca 72  Q
    |||| ||| |||||||| |||||||||||||||| | || |||||||||||||||    
T  40281853 aaatattctttcatacggtacaaaaatatatttattttccataaatatattttca 40281907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 443455 - 443406
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||| ||| |||||||||||||||| | || ||||||||||||||||||    
T  443455 cttcagacggtacaaaaatatatttattgtccataaatatattttcagca 443406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 13099936 - 13099985
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| ||| |||||||||||| | || ||||||||||||||||||    
T  13099936 cttcatacggtacgaaaatatatttattgtccataaatatattttcagca 13099985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 18345366 - 18345322
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatatttt 70  Q
    ||||||||| |||||||||||||||| | || |||||||||||||    
T  18345366 cttcatacggtacaaaaatatatttattgtcaataaatatatttt 18345322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 18596409 - 18596336
Alignment:
Q  89 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  18596409 aacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 18596336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 25803788 - 25803717
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  25803788 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 25803717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 27912300 - 27912229
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  27912300 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 27912229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 15552006 - 15551935
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  15552006 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 15551935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 18468779 - 18468708
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||    
T  18468779 cacaaaatatatttgaaacaaatcttttatatttttagcaaaaatattctccatccatcaaattttgagtca 18468708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 26098760 - 26098831
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||    
T  26098760 cacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtca 26098831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 27910216 - 27910145
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||    
T  27910216 cacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtca 27910145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 26097501 - 26097431
Alignment:
Q  92 acaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  26097501 acaaaatatatttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttgagtca 26097431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 17415822 - 17415890
Alignment:
Q  94 aaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||    
T  17415822 aaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtca 17415890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 3373549 - 3373620
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| |||||||    
T  3373549 cacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattctgagtca 3373620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 18509826 - 18509897
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||| |||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  18509826 cacaaaatatattcgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 18509897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 18511721 - 18511792
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||    
T  18511721 cacaaaatatattcgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtca 18511792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 21288610 - 21288541
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagt 160  Q
    |||||||||||||| ||||||||||||  |||||||||| |||||||||||||| |||||||||||||||    
T  21288610 cacaaaatatattttaaacaaatcttttttatttttagcaacaatattctccatccatcaaattttgagt 21288541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 6661950 - 6662023
Alignment:
Q  89 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||| ||| ||||||||||| |||||||||| ||| |||||| |||| |||||    
T  6661950 aacacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaagttttaagtca 6662023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 10586610 - 10586549
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaa 152  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||    
T  10586610 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattccccatccatcaaa 10586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 162
Target Start/End: Complemental strand, 40221361 - 40221292
Alignment:
Q  93 caaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| |||  || |||||||||||||    
T  40221361 caaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatcaattaaattttgagtca 40221292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 5779146 - 5779221
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||| |||| |||  |||||||||| |||||||||    
T  5779146 cacaaaatatatttgaaacaaatcttttatatttttagcaataatcttcttcatctatcaaattttaagtcaattt 5779221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 18466502 - 18466443
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattct 85  Q
    |||||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||    
T  18466502 cttcatacgatacaaaaatatatttattgtccataaatatatttttagcaacaatattct 18466443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 17415763 - 17415821
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaa 76  Q
    ||||||||||||||||  |||||||||||||||| | || |||||||||||||||||||    
T  17415763 aaattttccttcatacagtacaaaaatatatttattgtccataaatatattttcagcaa 17415821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 3373501 - 3373550
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  3373501 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 3373550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 10586658 - 10586609
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  10586658 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 10586609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 18468827 - 18468778
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  18468827 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 18468778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 25803836 - 25803787
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  25803836 cttcatacgatacaaaaatatatttattgtccataaatatattttcagca 25803787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 27912347 - 27912299
Alignment:
Q  27 ttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||||||||||||||||||| | || ||||||||||||||||||    
T  27912347 ttcatacgatacaaaaatatatttattgtccataaatatattttcagca 27912299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 15143273 - 15143230
Alignment:
Q  119 atatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  15143273 atatttttagcaacaatattctccatccatcaaattttgagtca 15143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 15143319 - 15143252
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattct 85  Q
    |||| |||||||||| | ||||||||| |||||| | || ||||||||||||| ||||||||||||||    
T  15143319 aaatcttccttcatatggtacaaaaatgtatttattgtccataaatatatttttagcaacaatattct 15143252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 18466464 - 18466421
Alignment:
Q  119 atatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  18466464 atatttttagcaacaatattctccatccatcaaattttgagtca 18466421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 15552054 - 15552005
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||||||||||||||||||||| | || |||||||||| |||||||    
T  15552054 cttcatacgatacaaaaatatatttattgtccataaatatatcttcagca 15552005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 18509778 - 18509827
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||||    
T  18509778 cttcatacggtacaaaaatatatttattgtccataaatatattttcagca 18509827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 18511673 - 18511722
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||||    
T  18511673 cttcatacggtacaaaaatatatttattgtccataaatatattttcagca 18511722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 27910264 - 27910215
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    |||||||| ||||||||||||||||| | || ||||||||||||||||||    
T  27910264 cttcatacaatacaaaaatatatttattgtccataaatatattttcagca 27910215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 2532736 - 2532784
Alignment:
Q  77 caatattctagaaacacaaaatatatttgaaacaaatctttcatatttt 125  Q
    |||| ||||||| |||||| ||||||||||||||||||||| |||||||    
T  2532736 caattttctagagacacaagatatatttgaaacaaatcttttatatttt 2532784  T

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Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 26097550 - 26097503
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcag 73  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||    
T  26097550 cttcatacggtacaaaaatatatttattgtccataaatatattttcag 26097503  T

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Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 32520300 - 32520231
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatattt--actatctataaatatattttcagcaacaatattct 85  Q
    ||||||| |||| |||| |||||||||||||||  ||| |  ||||||||||||||||||||||| ||||    
T  32520300 aaatttttcttcgtacggtacaaaaatatatttttactctacataaatatattttcagcaacaatcttct 32520231  T

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Target: scaffold1674 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 14 - 85
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  14 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 85  T

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Target: scaffold0468 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 2104 - 2175
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  2104 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 2175  T

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Target: scaffold0005 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 51790 - 51719
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||    
T  51790 cacaaaatatatttgaaacaaatcttttatatttttagcaacattattctccatccatcaaattttgagtca 51719  T

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Target: scaffold0005; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 50230 - 50169
Alignment:
Q  101 atttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||||||| ||||||||||| ||| |||||| ||| |||||||||||||||||    
T  50230 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtca 50169  T

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Target: scaffold0005; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 170115 - 170050
Alignment:
Q  36 tacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatata 101  Q
    |||||||||||||||  | || || |||||||||||||||||||| || ||||| |||||||||||    
T  170115 tacaaaaatatatttgttgtccatgaatatattttcagcaacaattttttagaagcacaaaatata 170050  T

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Target: scaffold0154 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 11980 - 12047
Alignment:
Q  91 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttga 158  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||||    
T  11980 cacaaaatatatttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttga 12047  T

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Target: scaffold0154; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 11932 - 11981
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||||    
T  11932 cttcatacggtacaaaaatatatttattgtccataaatatattttcagca 11981  T

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Target: scaffold0511 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 1872 - 1745
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatatttgaaacaaatcttt 117  Q
    |||| ||||||||||||||||||||||||||||| | || ||||||||||||||||||                 |||||||||||||||||||||||||    
T  1872 aaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagca-----------------caaaatatatttgaaacaaatcttt 1790  T
Q  118 catatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
     ||||||||||| |||||||||| | | | |||||||||||||||    
T  1789 tatatttttagcaacaatattcttcttccttcaaattttgagtca 1745  T

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Target: scaffold0031 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 78961 - 78893
Alignment:
Q  94 aaaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagtca 162  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||    
T  78961 aaaatatatttgagacaaatcttttatatttttagcaacaatattctccatccatcaaattttaagtca 78893  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 79012 - 78968
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatatttt 70  Q
    ||||||||  |||||||||||||||| |||| |||||||||||||    
T  79012 cttcatacagtacaaaaatatatttattatccataaatatatttt 78968  T

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Target: scaffold0133 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 4623 - 4558
Alignment:
Q  95 aaatatatttgaaacaaatctttcatatttttagcgacaatattctccattcatcaaattttgagt 160  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||    
T  4623 aaatatattcgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagt 4558  T

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Target: scaffold0133; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 4683 - 4626
Alignment:
Q  18 aaattttccttcatacgatacaaaaatatatttactatctataaatatattttcagca 75  Q
    ||||| ||||||||||  ||||||||||||| || | || ||||||||||||||||||    
T  4683 aaattgtccttcatacagtacaaaaatatatatattgtccataaatatattttcagca 4626  T

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Target: scaffold0008 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 57859 - 57999
Alignment:
Q  26 cttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctagaa--acacaaaatatatttgaaacaaatctttcatatt 123  Q
    ||||||||| |||||||||||||||| | |  ||| ||||||||||| ||||||| |||| |||  |||||||| |||| | |||||||||||| ||| |    
T  57859 cttcatacggtacaaaaatatatttattgttcatacatatattttcaacaacaatcttctggaagcacacaaaaaatatataaaacaaatcttttatact 57958  T
Q  124 tttagcgacaatattctccattcatcaaattttgagtcaattt 166  Q
    |||||  |||  ||||  ||| |||||||||||||||||||||    
T  57959 tttagaaaca--attcatcatccatcaaattttgagtcaattt 57999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 2173 - 2263
Alignment:
Q  36 tacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaa-tatatttgaaacaaatctttcatatttt 125  Q
    |||||||||||||||  |  | ||||||||||||||||||||||| | || |||||| |||| |||||||||||||||||||| |||||||    
T  2173 tacaaaaatatatttgatgcccataaatatattttcagcaacaatctacttgaaacataaaaatatatttgaaacaaatcttttatatttt 2263  T

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Target: scaffold0809 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 497 - 565
Alignment:
Q  36 tacaaaaatatatttactatctataaatatattttcagcaacaatattctagaaacacaaaatatattt 104  Q
    |||||||||||||||  | || |  ||||| |||||||||| ||| |||||||| ||||||||||||||    
T  497 tacaaaaatatatttgttgtccaagaatattttttcagcaataattttctagaagcacaaaatatattt 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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