View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19007_low_47 (Length: 241)
Name: NF19007_low_47
Description: NF19007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19007_low_47 |
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Alignment Details
Target: chr4 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 18 - 201
Target Start/End: Original strand, 6021239 - 6021425
Alignment:
| Q |
18 |
aatcatatagtattaatatatgtgaaactttgaaaagttcatacctcatggtaaatttagccaacacaagaaggtgctgatgaattacatttccatttat |
117 |
Q |
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| T |
6021239 |
aatcatatagtattaatatatgtgaaactttgaaaagttcatacctcatggtaaatttagccaacacaagaaggtgctaatgaattacatttccatttat |
6021338 |
T |
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| Q |
118 |
aatctcgtattctgactttcataacaaagacatttttcaaagaagacttttataataaagcatat---tacttactatctttttgac |
201 |
Q |
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| T |
6021339 |
aatctcgtattctgactttcataacaaagacatttttcaaagaagacttttataataaagcatattactacttactatctttttgac |
6021425 |
T |
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