View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19007_low_56 (Length: 211)
Name: NF19007_low_56
Description: NF19007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19007_low_56 |
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Alignment Details
Target: chr3 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 19 - 196
Target Start/End: Complemental strand, 52593728 - 52593551
Alignment:
| Q |
19 |
atgattggcgcttaaatttaccaattatttattcctttttaccaataaataactagcagtagtagttggtgttaagcaagtaaaggagttaatattattt |
118 |
Q |
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| T |
52593728 |
atgattggcgcttaaatttaccaattatttattcctttttaccaataaataactagcagtagtagttggtgttaagcaagtaaaggagttaatattattt |
52593629 |
T |
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| Q |
119 |
aattggttggtaccgttcttccaatgataaggtggtcggtctttctttttgtttgaaattaaaaacatatactctctg |
196 |
Q |
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| T |
52593628 |
aattggttggtaccgttcttccaatgataaggtggtcggtctttctttttgtttgaaattaaaaacatatactctctg |
52593551 |
T |
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