View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19008_high_4 (Length: 256)
Name: NF19008_high_4
Description: NF19008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19008_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 13975328 - 13975558
Alignment:
| Q |
12 |
atgaaggcgaatccaatgaaaaccaggctgaaccaaatggaatgaatacttagcttcttgaatgaaaattctagcagttgaatatataggtgaaggaaca |
111 |
Q |
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| T |
13975328 |
atgaaggcgaatccaatgaaaaccaggctgaaccaaatggaatgaatacttagcttcttgaatgaaaattctagcagttgaatatataggtgaaggaaca |
13975427 |
T |
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| Q |
112 |
tcagcatcagttgctgaaactttgtaatcatccttagcttgtaaaaatgaatttgcttgtggatctgatttgaattgtctaccatcaggtaaagtaacta |
211 |
Q |
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| T |
13975428 |
tcagcatcagttgctgaaactttgtaatcatccttagcttgtaaaaatgaatttgcttgtggatctgatttgaattgtctaccatcaggtaaagtaacta |
13975527 |
T |
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| Q |
212 |
cattttcagaaccacaatcaataagaaaact |
242 |
Q |
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| T |
13975528 |
cattttcagaaccacaatcaataagaaaact |
13975558 |
T |
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