View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19009_high_49 (Length: 331)

Name: NF19009_high_49
Description: NF19009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19009_high_49
NF19009_high_49
[»] chr5 (33 HSPs)
chr5 (19-148)||(41305030-41305159)
chr5 (149-331)||(12179039-12179220)
chr5 (149-331)||(33843303-33843484)
chr5 (149-331)||(11811893-11812074)
chr5 (151-331)||(358996-359175)
chr5 (149-331)||(26087808-26087989)
chr5 (151-331)||(3491009-3491189)
chr5 (149-331)||(27232093-27232274)
chr5 (149-331)||(23638023-23638204)
chr5 (149-331)||(23834686-23834867)
chr5 (149-331)||(1800115-1800296)
chr5 (149-331)||(7260052-7260232)
chr5 (149-331)||(12393527-12393707)
chr5 (149-331)||(21690561-21690741)
chr5 (237-331)||(22957166-22957260)
chr5 (237-331)||(29895072-29895166)
chr5 (149-331)||(11951049-11951229)
chr5 (149-331)||(15791346-15791526)
chr5 (149-331)||(17950450-17950630)
chr5 (237-331)||(5446922-5447016)
chr5 (237-331)||(36382700-36382794)
chr5 (237-331)||(37007372-37007466)
chr5 (151-331)||(37578602-37578780)
chr5 (237-331)||(7788811-7788905)
chr5 (238-330)||(34462034-34462126)
chr5 (237-331)||(31513652-31513747)
chr5 (237-331)||(20378458-20378553)
chr5 (238-330)||(16565015-16565108)
chr5 (149-194)||(36450356-36450401)
chr5 (293-331)||(21994428-21994466)
chr5 (293-331)||(24963372-24963410)
chr5 (293-331)||(36450220-36450258)
chr5 (149-194)||(29895207-29895252)
[»] chr7 (23 HSPs)
chr7 (149-331)||(567638-567819)
chr7 (149-331)||(27974683-27974865)
chr7 (151-331)||(16228453-16228632)
chr7 (149-331)||(13833452-13833633)
chr7 (151-331)||(2549655-2549835)
chr7 (152-331)||(34137030-34137209)
chr7 (151-331)||(4830308-4830487)
chr7 (149-331)||(5207571-5207753)
chr7 (149-328)||(8812425-8812602)
chr7 (149-331)||(16400089-16400269)
chr7 (237-331)||(23884973-23885067)
chr7 (149-331)||(9462931-9463112)
chr7 (238-331)||(12586339-12586432)
chr7 (239-331)||(30376670-30376763)
chr7 (238-330)||(3430882-3430974)
chr7 (238-328)||(805133-805223)
chr7 (241-330)||(16294019-16294108)
chr7 (293-331)||(4950282-4950320)
chr7 (288-331)||(15186253-15186296)
chr7 (293-331)||(29082680-29082718)
chr7 (238-327)||(840147-840236)
chr7 (238-327)||(847323-847412)
chr7 (238-327)||(1205327-1205416)
[»] chr6 (22 HSPs)
chr6 (149-331)||(27056765-27056946)
chr6 (151-331)||(19715629-19715809)
chr6 (149-331)||(3694147-3694329)
chr6 (163-331)||(22478973-22479141)
chr6 (151-323)||(28267068-28267239)
chr6 (151-323)||(28345817-28345988)
chr6 (151-331)||(20457371-20457551)
chr6 (149-331)||(20045980-20046161)
chr6 (149-331)||(621262-621442)
chr6 (149-331)||(16823107-16823288)
chr6 (150-331)||(22777100-22777279)
chr6 (151-331)||(18911067-18911242)
chr6 (149-331)||(9143039-9143220)
chr6 (237-331)||(20056319-20056413)
chr6 (237-331)||(18219497-18219592)
chr6 (288-331)||(28269813-28269856)
chr6 (288-331)||(28348563-28348606)
chr6 (293-331)||(18112637-18112675)
chr6 (238-327)||(22325857-22325946)
chr6 (290-331)||(25700301-25700342)
chr6 (293-331)||(23982122-23982160)
chr6 (240-331)||(16636109-16636201)
[»] chr2 (13 HSPs)
chr2 (149-331)||(16275381-16275562)
chr2 (149-331)||(3764410-3764591)
chr2 (149-331)||(15950978-15951159)
chr2 (151-331)||(24692095-24692273)
chr2 (149-331)||(22942735-22942915)
chr2 (237-331)||(24700934-24701028)
chr2 (237-331)||(12377022-12377117)
chr2 (238-331)||(25493808-25493901)
chr2 (242-331)||(40388720-40388809)
chr2 (293-331)||(21858187-21858225)
chr2 (288-331)||(42386727-42386770)
chr2 (238-331)||(24287570-24287663)
chr2 (149-190)||(40388629-40388670)
[»] chr1 (15 HSPs)
chr1 (149-331)||(31554108-31554289)
chr1 (151-331)||(22473297-22473476)
chr1 (151-331)||(13470689-13470869)
chr1 (151-328)||(14818194-14818371)
chr1 (151-331)||(19370791-19370971)
chr1 (151-331)||(1957792-1957972)
chr1 (149-331)||(6203092-6203272)
chr1 (149-331)||(27168053-27168233)
chr1 (149-331)||(5635758-5635939)
chr1 (237-331)||(13452783-13452878)
chr1 (243-330)||(1066056-1066145)
chr1 (237-328)||(22429895-22429987)
chr1 (290-331)||(2387120-2387162)
chr1 (293-331)||(31541907-31541945)
chr1 (150-191)||(22430031-22430072)
[»] scaffold0047 (1 HSPs)
scaffold0047 (151-331)||(84128-84307)
[»] chr4 (14 HSPs)
chr4 (151-331)||(19760528-19760707)
chr4 (151-331)||(10787369-10787549)
chr4 (19-148)||(41740562-41740691)
chr4 (152-331)||(16726128-16726305)
chr4 (149-331)||(14883515-14883696)
chr4 (149-331)||(3842022-3842202)
chr4 (149-331)||(22705974-22706154)
chr4 (150-331)||(9186826-9187005)
chr4 (238-331)||(3359194-3359287)
chr4 (238-331)||(15080041-15080134)
chr4 (149-261)||(15900859-15900970)
chr4 (237-331)||(26218699-26218794)
chr4 (288-331)||(14736391-14736434)
chr4 (242-331)||(23994129-23994221)
[»] chr3 (40 HSPs)
chr3 (149-331)||(25265500-25265681)
chr3 (151-331)||(5143750-5143929)
chr3 (151-331)||(6564503-6564683)
chr3 (151-331)||(11932242-11932422)
chr3 (151-331)||(24215459-24215639)
chr3 (151-331)||(70121-70301)
chr3 (151-331)||(4436319-4436498)
chr3 (151-331)||(17919769-17919949)
chr3 (151-331)||(22952597-22952777)
chr3 (151-331)||(14891013-14891193)
chr3 (151-306)||(17660534-17660688)
chr3 (149-331)||(15535150-15535331)
chr3 (151-331)||(26384667-26384846)
chr3 (149-331)||(8618443-8618624)
chr3 (149-331)||(15622420-15622601)
chr3 (237-331)||(15607757-15607851)
chr3 (149-331)||(46398597-46398777)
chr3 (149-331)||(6196386-6196566)
chr3 (237-331)||(8806303-8806397)
chr3 (149-331)||(37263409-37263589)
chr3 (237-331)||(15911874-15911968)
chr3 (150-331)||(21609751-21609930)
chr3 (149-331)||(5957557-5957738)
chr3 (238-331)||(20436488-20436581)
chr3 (238-330)||(3677488-3677580)
chr3 (238-330)||(41433652-41433744)
chr3 (149-331)||(46373629-46373810)
chr3 (238-330)||(30014059-30014151)
chr3 (245-331)||(3243368-3243454)
chr3 (238-331)||(14396628-14396722)
chr3 (238-327)||(30093877-30093966)
chr3 (293-331)||(12477601-12477639)
chr3 (293-331)||(15683227-15683265)
chr3 (293-331)||(15697620-15697658)
chr3 (149-194)||(13109706-13109751)
chr3 (288-331)||(7096077-7096120)
chr3 (293-331)||(9553129-9553167)
chr3 (293-331)||(13109849-13109887)
chr3 (293-331)||(41000246-41000284)
chr3 (293-331)||(41009029-41009067)
[»] scaffold0084 (1 HSPs)
scaffold0084 (151-331)||(34189-34368)
[»] scaffold0582 (1 HSPs)
scaffold0582 (151-331)||(5270-5448)
[»] scaffold0155 (1 HSPs)
scaffold0155 (151-331)||(20893-21073)
[»] scaffold0132 (1 HSPs)
scaffold0132 (151-331)||(30836-31016)
[»] chr8 (9 HSPs)
chr8 (151-331)||(14205222-14205402)
chr8 (149-331)||(20735691-20735871)
chr8 (149-331)||(20740729-20740909)
chr8 (149-331)||(20744249-20744429)
chr8 (149-331)||(6665702-6665883)
chr8 (149-331)||(6673364-6673545)
chr8 (238-331)||(22105203-22105296)
chr8 (239-315)||(24709523-24709599)
chr8 (151-202)||(22105117-22105168)
[»] scaffold0389 (1 HSPs)
scaffold0389 (149-331)||(1676-1857)
[»] scaffold0362 (1 HSPs)
scaffold0362 (150-331)||(2001-2181)
[»] scaffold0243 (1 HSPs)
scaffold0243 (151-331)||(16504-16683)
[»] scaffold0327 (1 HSPs)
scaffold0327 (152-331)||(17005-17183)
[»] scaffold0094 (1 HSPs)
scaffold0094 (149-331)||(27858-28038)
[»] scaffold0019 (1 HSPs)
scaffold0019 (149-331)||(19720-19901)
[»] scaffold0043 (1 HSPs)
scaffold0043 (235-331)||(31325-31421)
[»] scaffold0068 (1 HSPs)
scaffold0068 (149-331)||(23169-23349)
[»] scaffold0014 (2 HSPs)
scaffold0014 (237-331)||(186067-186161)
scaffold0014 (149-194)||(185981-186026)
[»] scaffold1818 (1 HSPs)
scaffold1818 (237-331)||(312-406)
[»] scaffold0107 (1 HSPs)
scaffold0107 (237-331)||(428-522)
[»] scaffold0005 (1 HSPs)
scaffold0005 (237-329)||(300985-301077)
[»] scaffold0435 (1 HSPs)
scaffold0435 (237-331)||(14772-14866)
[»] scaffold0441 (1 HSPs)
scaffold0441 (237-331)||(9011-9105)
[»] scaffold0393 (1 HSPs)
scaffold0393 (238-331)||(3453-3546)
[»] scaffold0125 (1 HSPs)
scaffold0125 (238-331)||(11194-11287)
[»] scaffold0029 (1 HSPs)
scaffold0029 (237-331)||(22529-22623)
[»] scaffold0364 (1 HSPs)
scaffold0364 (238-331)||(512-605)
[»] scaffold0031 (1 HSPs)
scaffold0031 (238-331)||(29732-29825)
[»] scaffold0605 (1 HSPs)
scaffold0605 (288-331)||(7348-7391)
[»] scaffold0009 (1 HSPs)
scaffold0009 (284-331)||(151657-151704)
[»] scaffold0320 (2 HSPs)
scaffold0320 (293-331)||(4423-4461)
scaffold0320 (150-191)||(4281-4322)
[»] scaffold0183 (1 HSPs)
scaffold0183 (293-331)||(30402-30440)
[»] scaffold0023 (2 HSPs)
scaffold0023 (293-331)||(135936-135974)
scaffold0023 (293-331)||(144898-144936)
[»] scaffold0056 (1 HSPs)
scaffold0056 (240-331)||(11929-12023)
[»] scaffold0044 (1 HSPs)
scaffold0044 (293-331)||(74701-74739)


Alignment Details
Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 41305159 - 41305030
Alignment:
Q  19 ttcaggacgtgtcaacctatacaactagaaatcagggattatacaactaattataataaatactagtgattctaatgactcagctaataattacatttaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41305159 ttcaggacgtgtcaacctatacaactagaaatcagggattatacaactaattataataaatactagtgattctaatgactcagctaataattacatttaa 41305060  T
Q  119 tattggtgattctagtgactcacgccaaca 148  Q
    ||||||||||||||||||||||||||||||    
T  41305059 tattggtgattctagtgactcacgccaaca 41305030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 12179039 - 12179220
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  12179039 acgggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacaggagtactcccattccaatta-tattcgtcggaaagtctcgt 12179137  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  12179138 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagaggggtt 12179220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 33843303 - 33843484
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  33843303 acgggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacaggagtactcccattccaatta-tattcgtcggaaagtctcgt 33843401  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  33843402 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagaggggtt 33843484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 11811893 - 11812074
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||| |    
T  11811893 acgggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacaggagtactcccattccaatta-tattcgtcggaaagtctcat 11811991  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  11811992 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagaggggtt 11812074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 358996 - 359175
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||   ||||||| ||||||||    
T  358996 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatta-tattcgtcggaaaatctcgttt 359094  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  359095 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 359175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 26087808 - 26087989
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||| ||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||| |    
T  26087808 acgggttctaccaagttcccaaagtctttaaccactttcgaatatttatcgggtgacaggagtactcccattccaatta-tattcgtcggaaagtctcat 26087906  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  26087907 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagaggggtt 26087989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 3491009 - 3491189
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||||||||    
T  3491009 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatt-atattcgtcggaaagtctcgttt 3491107  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcg-tcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  3491108 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgttcctaaaaggccaagatgggtt 3491189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 27232093 - 27232274
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||||||| |||| |||||||||||||||||||||   ||  ||||||||||||||    
T  27232093 acgggttctaccaagttcccaaagtctttaaccacttccgaatatttatcggatgacgggagtactcccattccaattatgttcg-tcggaaagtctcgt 27232191  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  27232192 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagaggggtt 27232274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 23638204 - 23638023
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||| |||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||   |||||||||||| |    
T  23638204 acggtttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatta-tattcgtcggaaagtctcat 23638106  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  23638105 ttgagtgtagtatcgcgtatcaactaattcaagagtactctagattagccaccgcactacgtcctaaaaggccaggatgggtt 23638023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 23834686 - 23834867
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||| |||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||   |||||||||||| |    
T  23834686 acggtttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatta-tattcgtcggaaagtctcat 23834784  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  23834785 ttgagtgtagtatcgcgtatcaactaattcaagagtactctagattagccaccgcactacgtcctaaaaggccaggatgggtt 23834867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 1800296 - 1800115
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||| | |||||||||| |||||| ||| ||||||||||||||  |||||   | ||||||||||||    
T  1800296 acgggttctaccaagttcccaaagtctttaaccactttcaaatatttatccggtgacgggactactcccattccaac-aatattcgtaggaaagtctcgt 1800198  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  1800197 ttgggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 1800115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 7260052 - 7260232
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||| ||||||| ||| || |||||    |||||| || ||   |  |||||| ||||    
T  7260052 acgggttctaccaagttcccaaagtcattaaccacttccgaatatt-atcgggttacaagactactcttgatccaat-aagattcgtatgaaagtttcgt 7260149  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  7260150 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 7260232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 12393527 - 12393707
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||| ||||||| ||| || |||||    |||||| || ||   |  |||||| ||||    
T  12393527 acgggttctaccaagttcccaaagtcattaaccacttccgaatatt-atcgggttacaagactactcttgatccaat-aagattcgtatgaaagtttcgt 12393624  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12393625 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 12393707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 21690741 - 21690561
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||| ||||||| ||| || |||||    |||||| || ||   |  |||||| ||||    
T  21690741 acgggttctaccaagttcccaaagtcattaaccacttccgaatatt-atcgggttacaagactactcttgatccaat-aagattcgtatgaaagtttcgt 21690644  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  21690643 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 21690561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 22957166 - 22957260
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||| |||||||| ||||||||||  |||||||||||||||||| |||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  22957166 ggaaagactcgtttgggtgtagtatcgcgtatcaaccaattcaagactactcttgattaggcaccgcactacgtcctaaaaggccaagatgggtt 22957260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 29895166 - 29895072
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||||||| ||||||| ||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  29895166 ggaaagtctcgtttgagtgtagtctcgcgtatcaactaattcaagattactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 29895072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 11951049 - 11951229
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||| | ||||||||||||  |||||||| ||||||| || ||| ||| ||| || |||||    |||||| ||||||  | ||||||| || |    
T  11951049 acgggttctatccagttcccaaagtcatcaactacctccgaatgtt-atcaggttacaagactactcttgatccaat-aatatccgtaggaaagtttcat 11951146  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  11951147 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 11951229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 15791346 - 15791526
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||  |||||||||||||  |||||||||||||||  || ||| ||| ||| || ||||| |  |||||| ||||||  |  |||||| || |    
T  15791346 acgggttctattaagttcccaaagtcatcaactacttccgaacgtt-atcaggttacaagactactctcgatccaat-aatatccgtaagaaagtttcat 15791443  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  15791444 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 15791526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 17950630 - 17950450
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||| | ||||||||||||  |||||||| ||||||| || ||| ||| ||| || |||||    |||||| ||||||  | ||||||| || |    
T  17950630 acgggttctatccagttcccaaagtcatcaactacctccgaatgtt-atcaggttacaagactactcttgatccaat-aatatccgtaggaaagtttcat 17950533  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  17950532 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 17950450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 5446922 - 5447016
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||| || |||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  5446922 ggaaagtttcatttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 5447016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 36382700 - 36382794
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||| || |||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  36382700 ggaaagtttcatttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 36382794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 37007372 - 37007466
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||| || |||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  37007372 ggaaagtttcatttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 37007466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 37578780 - 37578602
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| | |||| |||||| |||||| ||| ||| ||| || |||||    |||||| |  || | | ||||||||| ||||    
T  37578780 gggttctaccaagttcccaaagtctacaaccacttccaaatatt-atcaggttacaagattactcttgatccaatgac-atttgtaggaaagtcttgttt 37578683  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  ||||| || ||||||||| |||||| ||||| |||||||||| |||||||| |||||||||||||||    
T  37578682 gggtgtagtatcgcgtatcgactaattcaagattactcttgattacccaccgcactacgtcctaagaggccaagatgggtt 37578602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 7788905 - 7788811
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||| || |||| ||||||||||  |||||||| || |||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  7788905 ggaaagtttcatttgagtgtagtatcgcgtatcaactaaatcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 7788811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 34462126 - 34462034
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggt 330  Q
    ||||||||||| || ||||||||||  |||||||| |   ||||| |||||| |||||||||||||||| |||||||||||||||||||||||    
T  34462126 gaaagtctcgtctgagtgtagtatcgcgtatcaactagaccaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggt 34462034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 31513747 - 31513652
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcct-aaaaggccaagatgggtt 331  Q
    ||||||| || |||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| |||||| ||||||| ||||||||||    
T  31513747 ggaaagtttcttttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaaggctaagatgggtt 31513652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 20378553 - 20378458
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattca-agagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||| |||| ||||||||||  ||||| || |||||  |||  || | || |||||||||||||| ||||||||||||||||||||||||    
T  20378553 ggaaagtctcatttgagtgtagtatcgcgtatcgactaattccgagaaaacacccggttagccaccgcactacgtcctaaaaggccaagatgggtt 20378458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 16565108 - 16565015
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaatt-caagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggt 330  Q
    ||||||||| |||| ||||||| ||  || ||||| |||| ||||| |||||| |||||| ||||||||| || ||||||| ||||||||||||    
T  16565108 gaaagtctcatttgagtgtagtttcgcgtgtcaactaatttcaagactactcttgattagtcaccgcactacgccctaaaatgccaagatgggt 16565015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 36450401 - 36450356
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatt 194  Q
    |||||||||||||||||||||||||  || ||||||||||||||||    
T  36450401 acgggttctaccaagttcccaaagtcctcgactacttccgaatatt 36450356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 21994428 - 21994466
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  21994428 ttagccaccgcactacatcctaaaaggccaagatgggtt 21994466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 24963372 - 24963410
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  24963372 ttagccaccacactacgtcctaaaaggccaagatgggtt 24963410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 36450258 - 36450220
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  36450258 ttagccaccgcactacgtcctaaaaggccaggatgggtt 36450220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 29895252 - 29895207
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatt 194  Q
    ||||||||||||||||||||||||| || ||| |||||| ||||||    
T  29895252 acgggttctaccaagttcccaaagtctttaaccacttccaaatatt 29895207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 567638 - 567819
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  567638 acgggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacaggagtactcccattccaatta-tattcgtcggaaagtctcgt 567736  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  567737 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagaggggtt 567819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 27974683 - 27974865
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||    
T  27974683 acgggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacaggagtactcccattccaatt-atattcgtcggaaagtctcgt 27974781  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcg-tcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  27974782 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgttcctaaaaggccaagatgggtt 27974865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 16228632 - 16228453
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||| ||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||   ||||||||||||||||    
T  16228632 gggttctactaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatta-tattcgtcggaaagtctcgttt 16228534  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16228533 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 16228453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 13833633 - 13833452
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  || || || ||||||||||||||||||||| ||||||||||||||||||||| |||   ||||||||||||||    
T  13833633 acgggttctaccaagttcccaaagtcctcgaccacctccgaatatttatcgggtgacgggagtactcccattccaatta-tattcgtcggaaagtctcgt 13833535  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13833534 ttgagtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 13833452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 2549835 - 2549655
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||||||||    
T  2549835 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatt-atattcgtcggaaagtctcgttt 2549737  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcg-tcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  2549736 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgttcctaaaaggccaagatgggtt 2549655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 152 - 331
Target Start/End: Original strand, 34137030 - 34137209
Alignment:
Q  152 ggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgtttg 251  Q
    |||||||||||||||||||||| || ||| ||||||||| |||||||||||||  |||||||||||||||||||||| |||  |||||||||||||||||    
T  34137030 ggttctaccaagttcccaaagtctttaaccacttccgaacatttatcgggtgatgggagtactcccattccaattaacatccgtcggaaagtctcgtttg 34137129  T
Q  252 cgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
     ||||||||||  |||||||| || |||||||||||||||||||||||||||||| ||||||||| | ||||||||||||    
T  34137130 ggtgtagtatcgcgtatcaactaaatcaagagtactctcgattagccaccgcactacgtcctaaaggaccaagatgggtt 34137209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 4830308 - 4830487
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||||  |||||   | |||||||||  |||    
T  4830308 gggttctaccaagttccaaaagttttcaaccactttcgaatatttatcgggtgacgggactactcccattccaac-aatattcgtaggaaagtctacttt 4830406  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |  |||||||||  |||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  4830407 ggatgtagtatcgcgtatcaaccaattcaagactactcttgattagccatcgcactacgtcctaaaaggccaagatgggtt 4830487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 5207571 - 5207753
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||    
T  5207571 acgggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacaggagtactcccattccaatt-atattcgtcggaaagtctcgt 5207669  T
Q  249 ttgcgtgtagtatcatgtatcaaccaatt-caagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  || || || | || | |||  || | || |||||||||||||| ||||||||||||||||||||||||    
T  5207670 ttgggtgtagtatcgcgtgtcgactagttccgagaaaacacccggttagccaccgcactacgtcctaaaaggccaagatgggtt 5207753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 149 - 328
Target Start/End: Complemental strand, 8812602 - 8812425
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||| ||| ||| ||| || |||||    |||||| || ||   | ||||||| ||||    
T  8812602 acgggttctaccaagttcccaaagtcattaaccacttccgaatatt-atcaggttacaagactactcttgatccaat-aagattcgtaggaaagtttcgt 8812505  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgg 328  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  8812504 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgg 8812425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 16400089 - 16400269
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||| | ||||||||||||  |||||||| ||||||| || ||| ||| ||| || |||||    |||||| ||||||  | ||||||| || |    
T  16400089 acgggttctatccagttcccaaagtcatcaactacctccgaatgtt-atcaggttacaagactactcttgatccaat-aatatccgtaggaaagtttcat 16400186  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  || ||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  16400187 ttgagtgtagtatcgcgtgtcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 16400269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 23884973 - 23885067
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||| || |||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  23884973 ggaaagtttcatttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 23885067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 9463112 - 9462931
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||| | ||||||||||||  |||||||| ||||||| || ||| ||| ||| || |||||    |||||| ||||||  | ||||||| || |    
T  9463112 acgggttctatccagttcccaaagtcatcaactacctccgaatgtt-atcaggttacaagactactcttgatccaat-aatatccgtaggaaagtttcat 9463015  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcct-aaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| |||||| ||||||| ||||||||||    
T  9463014 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaaggctaagatgggtt 9462931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 12586432 - 12586339
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||| | || ||||||||||  |||||||| ||  ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12586432 gaaagtctcttctgagtgtagtatcgcgtatcaactaaaccaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 12586339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 30376670 - 30376763
Alignment:
Q  239 aaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcct-aaaaggccaagatgggtt 331  Q
    ||||| ||||||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| |||||| ||||||| ||||||||||    
T  30376670 aaagtttcgtttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaaggctaagatgggtt 30376763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 330
Target Start/End: Original strand, 3430882 - 3430974
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggt 330  Q
    ||||||||||| || ||||||||||  |||||||| |   ||||| |||||| |||||||||||||||| |||||||||||||||||||||||    
T  3430882 gaaagtctcgtctgagtgtagtatcgcgtatcaactagaccaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggt 3430974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 805133 - 805223
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgg 328  Q
    ||||||||||| || ||||||||||  |||||||| |   ||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  805133 gaaagtctcgtctgagtgtagtatcgcgtatcaactagaccaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgg 805223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 16294019 - 16294108
Alignment:
Q  241 agtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggt 330  Q
    |||||||| || ||||||||||  |||||||| |   ||||| |||||| |||||||||||||||| ||||||||||||||| |||||||    
T  16294019 agtctcgtctgagtgtagtatcgcgtatcaactagaccaagactactcttgattagccaccgcactacgtcctaaaaggccaggatgggt 16294108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 4950282 - 4950320
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  4950282 ttagccaccgcactacgtcctaaaaggccaagatgggtt 4950320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 15186296 - 15186253
Alignment:
Q  288 ctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||| |||||||||||||| | ||||||||||||||||||||||    
T  15186296 ctcggttagccaccgcactacatcctaaaaggccaagatgggtt 15186253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 29082718 - 29082680
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  29082718 ttagccaccgcactacatcctaaaaggccaagatgggtt 29082680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 840236 - 840147
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatg 327  Q
    ||||||||||| |  ||||||||||  |||||||| ||  ||||| |||||  |  ||||||||||||| || |||||||||||||||||    
T  840236 gaaagtctcgtctaagtgtagtatcgcgtatcaactaaaccaagattactcaaggctagccaccgcactacgccctaaaaggccaagatg 840147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 847412 - 847323
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatg 327  Q
    ||||||||||| |  ||||||||||  |||||||| ||  ||||| |||||  |  ||||||||||||| || |||||||||||||||||    
T  847412 gaaagtctcgtctaagtgtagtatcgcgtatcaactaaaccaagattactcaaggctagccaccgcactacgccctaaaaggccaagatg 847323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 1205416 - 1205327
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatg 327  Q
    ||||||||||| |  ||||||||||  |||||||| ||  ||||| |||||  |  ||||||||||||| || |||||||||||||||||    
T  1205416 gaaagtctcgtctaagtgtagtatcgcgtatcaactaaaccaagattactcaaggctagccaccgcactacgccctaaaaggccaagatg 1205327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 27056765 - 27056946
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  27056765 acgggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacaggagtactcccattccaatta-tattcgtcggaaagtctcgt 27056863  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  27056864 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagaggggtt 27056946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 19715809 - 19715629
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||| |  | ||| ||||| |||||||||||||||||| |||||||||||||| ||||||| |||  ||||||||||||||||    
T  19715809 gggttctaccaagttcccaaactcattaaccacttctgaatatttatcgggtgacgggagtactcccattgcaattaacatccgtcggaaagtctcgttt 19715710  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19715709 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 19715629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 3694329 - 3694147
Alignment:
Q  149 acgggttctaccaag-ttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcg 247  Q
    ||||||||||||||| |||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||||   ||  ||||||||||||     
T  3694329 acgggttctaccaaggttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaattacattcg-tcggaaagtctca 3694231  T
Q  248 tttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3694230 tttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 3694147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 163 - 331
Target Start/End: Original strand, 22478973 - 22479141
Alignment:
Q  163 gttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgtttgcgtgtagtatc 262  Q
    |||||||||||  | |||  |||| || ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  22478973 gttcccaaagtcattaaccccttctgagtatttatcgggtgacgggagtactcccattccaattaatatccgtcggaaagtctcgtttgggtgtagtatc 22479072  T
Q  263 atgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
      |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22479073 gcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 22479141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 151 - 323
Target Start/End: Original strand, 28267068 - 28267239
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||  ||||||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||    
T  28267068 gggttctaccaagttcccaaagtctttaaccacttcaaaatatttatcgggtgacgggagtactcccattccaatta-tatttgtcggaaagtctcgttt 28267166  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaa 323  Q
    | |||||| |||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28267167 gggtgtagcatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaa 28267239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 151 - 323
Target Start/End: Original strand, 28345817 - 28345988
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||  ||||||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||    
T  28345817 gggttctaccaagttcccaaagtctttaaccacttcaaaatatttatcgggtgacgggagtactcccattccaatta-tatttgtcggaaagtctcgttt 28345915  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaa 323  Q
    | |||||| |||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28345916 gggtgtagcatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaa 28345988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 20457371 - 20457551
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    |||||||||||||||||||||||  | ||| ||||| ||||||||||||||||||  |||||||| |||||||||||| |||  ||||||||||||||||    
T  20457371 gggttctaccaagttcccaaagtcattaaccacttctgaatatttatcgggtgacgagagtactctcattccaattaacatccgtcggaaagtctcgttt 20457470  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||| |||||||||| |||| |||||| |||||||||||||||||    
T  20457471 gggtgtagtatcgcgtatcaactaattcaagagtactctcaattagccaccacactacgtcctgaaaggccaagatgggtt 20457551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 20045980 - 20046161
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| |||| | |||||||||| |||||| ||| ||||||||||||||| ||||| | | ||||||||||||    
T  20045980 acgggttctaccaagttcccaaagtccttaaccactttcaaatatttatcaggtgacgggactactcccattccaat-aatatttgtaggaaagtctcgt 20046078  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||||||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||||    
T  20046079 ttgggtgtagtatcgcgtatcaaccaattcaagactactcttggttagccaccgcactacgtcctaaaaggccaagatgggtt 20046161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 621262 - 621442
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||| ||| ||| ||| || |||||    |||||| || ||   | ||||||| ||||    
T  621262 acgggttctaccaagttcccaaagtcattaaccacttccgaatatt-atcaggttacaagactactcttgatccaat-aagattcgtaggaaagtttcgt 621359  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  621360 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 621442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 16823107 - 16823288
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||| ||||||| ||| || |||||    |||||| || ||   | ||||||| ||||    
T  16823107 acgggttctaccaagttcccaaagtcattaaccacttccgaatatt-atcgggttacaagactactcttgatccaat-aagattcgtaggaaagtttcgt 16823204  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattca-agagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  ||||||||||||||| ||| |||||| | |||||||||||||| ||||||||||||||||||||||||    
T  16823205 ttgagtgtagtatcgcgtatcaaccaattcagagactactcttggttagccaccgcactacgtcctaaaaggccaagatgggtt 16823288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 22777100 - 22777279
Alignment:
Q  150 cgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgtt 249  Q
    |||||||||||||||||||||||| | |||| |||||| |||||| ||| ||| ||| || |||||    |||||| |  || | | |||||||||||||    
T  22777100 cgggttctaccaagttcccaaagtctacaaccacttccaaatatt-atcaggttacaagattactcttgatccaat-atcatttgtaggaaagtctcgtt 22777197  T
Q  250 tgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    || ||||||| ||  |||||||| |||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  22777198 tgagtgtagtctcgcgtatcaactaattcatgattactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 22777279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 18911242 - 18911067
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcg---gaaagtctcg 247  Q
    ||||||||||||||| |||||||| ||||| |||||| ||| |||||||||| |||||| ||||||| |||||||    |||  |||   ||||||||||    
T  18911242 gggttctaccaagtttccaaagttgtcaaccacttccaaat-tttatcgggttacaggactactcccgttccaat----atcattcgtaagaaagtctcg 18911148  T
Q  248 tttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||| ||||||||||  |||||||| || |||||| |||||| ||||||   |||||||  |||||||||| ||||||||||||    
T  18911147 tttgggtgtagtatcgcgtatcaactaaatcaagactactcttgattag---ccgcactatgtcctaaaagaccaagatgggtt 18911067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 9143039 - 9143220
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||| | ||||||||||||  |||||||| ||||||| || ||| ||| ||| || |||||    |||||| ||||||  | ||||||| || |    
T  9143039 acgggttctatccagttcccaaagtcatcaactacctccgaatgtt-atcaggttacaagactactcttgatccaat-aatatccgtaggaaagtttcat 9143136  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcct-aaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| |||||| ||||||| ||||||||||    
T  9143137 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaaggctaagatgggtt 9143220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 20056319 - 20056413
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||| |||| ||||||| |   |||||||| ||||||||| |||||| |||||||||||||||| | ||||||||||||||||||||||    
T  20056319 ggaaagtctcatttgagtgtagtcttgcgtatcaactaattcaagattactcttgattagccaccgcactacatcctaaaaggccaagatgggtt 20056413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 18219497 - 18219592
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattca-agagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||| |||| ||||||||||  || ||||| |||||  |||  || |||| |||||||||||||| | ||||||||||||||||||||||    
T  18219497 ggaaagtctcatttgagtgtagtatcgcgtgtcaactaattccgagaaaacactcggttagccaccgcactacatcctaaaaggccaagatgggtt 18219592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 28269856 - 28269813
Alignment:
Q  288 ctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  28269856 ctcggttagccaccgcactacgtcctaaaaggccaagatgggtt 28269813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 28348606 - 28348563
Alignment:
Q  288 ctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  28348606 ctcggttagccaccgcactacgtcctaaaaggccaagatgggtt 28348563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 18112675 - 18112637
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  18112675 ttagccaccgcactacgtcctaaaaggccaagatgggtt 18112637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 22325946 - 22325857
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatg 327  Q
    ||||||||||| || ||||||||||  |||||||| ||  ||||| |||||  |  ||||||||||||| || |||||||||||||||||    
T  22325946 gaaagtctcgtctgagtgtagtatcgcgtatcaactaaaccaagattactcaaggctagccaccgcactacgccctaaaaggccaagatg 22325857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 25700342 - 25700301
Alignment:
Q  290 cgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  25700342 cgattagccactgcactacgtcctaaaaggccaagatgggtt 25700301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 23982122 - 23982160
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  23982122 ttagccaccgcactacatcctaaaaggccaagatgggtt 23982160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 16636201 - 16636109
Alignment:
Q  240 aagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcct-aaaaggccaagatgggtt 331  Q
    ||||||||| || ||||||||||  |||||||| ||  ||||| |||||  |  ||||||||||||| || ||| ||||||||||||||||||    
T  16636201 aagtctcgtctgagtgtagtatcgcgtatcaactaaaccaagattactcaaggctagccaccgcactacgccctaaaaaggccaagatgggtt 16636109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 16275562 - 16275381
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  16275562 acgggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacaggagtactcccattccaatta-tattcgtcggaaagtctcgt 16275464  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  16275463 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagaggggtt 16275381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 3764410 - 3764591
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||| |||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  3764410 acgggttctaccaaattcccaaagtctttaaccacttccgaatatttatcgggtgacaggagtactcccattccaatta-tattcgtcggaaagtctcgt 3764508  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  3764509 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagaggggtt 3764591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 15950978 - 15951159
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||| ||||||  || || || | ||||||||||||||||||  ||||| ||||||||||||||| |||   | ||||||||||||    
T  15950978 acgggttctaccaagttctcaaagtcctcgaccaccttcgaatatttatcgggtgaggggagtgctcccattccaatta-tattcgttggaaagtctcgt 15951076  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  15951077 ttgagtgtagtatcgcgtatcaactaattcaagagtactctcaattagccaccgcactacgtcctaaaaggccaagatgggtt 15951159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 24692273 - 24692095
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| | |||| |||||| |||||| ||| ||| ||| || |||||    |||||| || ||   | ||||||||||||||    
T  24692273 gggttctaccaagttcccaaagtctacaaccacttccaaatatt-atcaggttacaagattactcttgatccaat-aacattcgtaggaaagtctcgttt 24692176  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| | ||||||||||||||||||||||    
T  24692175 gagtgtagtatcgcgtatcaactaattcaagattactcttgattagccaccgcactacctcctaaaaggccaagatgggtt 24692095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 22942915 - 22942735
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||| | ||||||||||||  |||||||| ||||||| || ||| ||| ||| || |||||    |||||| ||||||  | ||||||| || |    
T  22942915 acgggttctatccagttcccaaagtcatcaactacctccgaatgtt-atcaggttacaagactactcttgatccaat-aatatccgtaggaaagtttcat 22942818  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  22942817 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 22942735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 24701028 - 24700934
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||||||| ||||||||||  |||||||| ||||||||  |||||| |||||||||||||||| | ||||||||||||||||||||||    
T  24701028 ggaaagtctcgtttgagtgtagtatcgcgtatcaactaattcaaggttactcttgattagccaccgcactacctcctaaaaggccaagatgggtt 24700934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 12377117 - 12377022
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcct-aaaaggccaagatgggtt 331  Q
    ||||||| || |||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  12377117 ggaaagtttcatttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaaggccaagatgggtt 12377022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 25493901 - 25493808
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||| || ||||||||||  |||||||| ||  ||||| |||||  |  ||||||||||||| || |||||||||||||||||||||    
T  25493901 gaaagtctcgtctgagtgtagtatcgcgtatcaactaaaccaagattactcaaggctagccaccgcactacgccctaaaaggccaagatgggtt 25493808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 40388720 - 40388809
Alignment:
Q  242 gtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||| || ||||||||||  |||||||  ||  ||||| |||||  |||||||||||||||| |||||||||||||||||| |||||    
T  40388720 gtctcgtctgagtgtagtatcgcgtatcaattaaaccaagattactcatgattagccaccgcactacgtcctaaaaggccaagaggggtt 40388809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 21858187 - 21858225
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  21858187 ttagccaccgcactacgtcctaaaaggccaagatgggtt 21858225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 42386770 - 42386727
Alignment:
Q  288 ctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||| |||||||||||||| | ||||||||||||||||||||||    
T  42386770 ctcggttagccaccgcactacatcctaaaaggccaagatgggtt 42386727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 24287663 - 24287570
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||| || ||||||||||   ||||||| ||  ||||| |||||  |  ||||||||||||| || ||||||||| |||||||||||    
T  24287663 gaaagtctcgtctgagtgtagtatcgcatatcaactaaaccaagattactcaaggctagccaccgcactacgccctaaaaggtcaagatgggtt 24287570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 40388629 - 40388670
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaa 190  Q
    ||||||||||||||||||||| |||| ||||| |||||||||    
T  40388629 acgggttctaccaagttcccagagttatcaaccacttccgaa 40388670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 31554289 - 31554108
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  31554289 acgggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacaggagtactcccattccaatta-tattcgtcggaaagtctcgt 31554191  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  31554190 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagaggggtt 31554108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 22473476 - 22473297
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||   ||||||||||||||||    
T  22473476 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatta-tattcgtcggaaagtctcgttt 22473378  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22473377 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 22473297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 13470869 - 13470689
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||||||||    
T  13470869 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatt-atattcgtcggaaagtctcgttt 13470771  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcg-tcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  13470770 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgttcctaaaaggccaagatgggtt 13470689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 151 - 328
Target Start/End: Original strand, 14818194 - 14818371
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||| |||||||||||||||  | ||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||||    
T  14818194 gggttctgccaagttcccaaagtcattaaccacttctgaatatttatcgggtgacgggagtactcccattccaattaacatccgtcggaaagtctcgttt 14818293  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgg 328  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14818294 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgg 14818371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 19370971 - 19370791
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    |||||||||||| ||| |||||| || ||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||  || |||||||||||||    
T  19370971 gggttctaccaaattcacaaagtctttaaccacttctgaatatttatcgggtgacgggagtactcccattccaattaacatccgtcagaaagtctcgttt 19370872  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19370871 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 19370791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 1957972 - 1957792
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    |||||||||||||||||||||||  | ||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  1957972 gggttctaccaagttcccaaagtcattaaccacttctgaatatttatcgggtgacgggagtactcccattccaattaacatctgtcggaaagtctcgttt 1957873  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  ||||||||  |||||||||||||||| |||||||||| |||| |||||| |||||||||||||||||    
T  1957872 gggtgtagtatcgcgtatcaacttattcaagagtactctctattagccaccacactacgtcctgaaaggccaagatgggtt 1957792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 6203092 - 6203272
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| |||| | |||||||||| |||||| ||| ||||||||||||||| |||||   | ||||||||||||    
T  6203092 acgggttctaccaagttcccaaagtccttaaccactttcaaatatttatcaggtgacgggactactcccattccaat-aatattcgtaggaaagtctcgt 6203190  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||| |||||| ||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  6203191 ttgggtgtagtatcacgtatca-ccaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 6203272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 27168233 - 27168053
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| | |||| |||||| |||| ||||| ||| ||| || ||||     ||||| | | || | | ||||||||||||    
T  27168233 acgggttctaccaagttcccaaagtctacaaccacttccaaata-ttatcaggttacaagattactattgatccaa-tgacatttgtaggaaagtctcgt 27168136  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  27168135 ttgggtgtagtatcgcgtatcaactaattcaagattactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 27168053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 5635758 - 5635939
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||| | ||||||||||||  |||||||| ||||||| || ||| ||| ||| || |||||    |||||| ||||||  | ||||||| || |    
T  5635758 acgggttctatccagttcccaaagtcatcaactacctccgaatgtt-atcaggttacaagactactcttgatccaat-aatatccgtaggaaagtttcat 5635855  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcct-aaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  5635856 ttgagtgtagtatcgcgtatcaactaattcaagactactctcgattagccaccgcactacgtcctaaaaaggctaagatgggtt 5635939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 13452878 - 13452783
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattc-aagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||| |||| ||||||||||  || ||||| | ||| ||||  || | || |||||||||||||| ||||||||||||||||||||||||    
T  13452878 ggaaagtctcatttgagtgtagtatcgcgtgtcaactagttccaagaaaacacccggttagccaccgcactacgtcctaaaaggccaagatgggtt 13452783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 330
Target Start/End: Original strand, 1066056 - 1066145
Alignment:
Q  243 tctcgtttgcgtgtagtatcatgtatcaaccaatt-caagagtactctcgattagccaccgcacttcgtcct-aaaaggccaagatgggt 330  Q
    ||||||||| ||||||  || ||||||||| |||| ||||| |||| | |||||||||||||||| | |||| |||||||||||||||||    
T  1066056 tctcgtttgagtgtagcttcgtgtatcaactaatttcaagactacttttgattagccaccgcactacatcctaaaaaggccaagatgggt 1066145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 328
Target Start/End: Complemental strand, 22429987 - 22429895
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattca-agagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgg 328  Q
    ||||||||||||||| ||||||||||  || || || |||||  |||  || | || |||||||||||||| |||||||||||||||||||||    
T  22429987 ggaaagtctcgtttgagtgtagtatcgcgtgtcgactaattccgagaaaacacccggttagccaccgcactacgtcctaaaaggccaagatgg 22429895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 2387162 - 2387120
Alignment:
Q  290 cgattagccaccgcacttcgtcct-aaaaggccaagatgggtt 331  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  2387162 cgattagccaccgcactacgtcctaaaaaggccaagatgggtt 2387120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 31541945 - 31541907
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  31541945 ttagccaccacactacgtcctaaaaggccaagatgggtt 31541907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 22430072 - 22430031
Alignment:
Q  150 cgggttctaccaagttcccaaagttttcaactacttccgaat 191  Q
    |||||||||||||||||||||||| | |||| ||||||||||    
T  22430072 cgggttctaccaagttcccaaagtctacaaccacttccgaat 22430031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 84307 - 84128
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||   ||||||||||||||||    
T  84307 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatta-tattcgtcggaaagtctcgttt 84209  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  84208 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 84128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 19760707 - 19760528
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||   ||||||||||||||||    
T  19760707 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatta-tattcgtcggaaagtctcgttt 19760609  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19760608 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 19760528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 10787549 - 10787369
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||||||||    
T  10787549 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatt-atattcgtcggaaagtctcgttt 10787451  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcg-tcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  10787450 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgttcctaaaaggccaagatgggtt 10787369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 41740691 - 41740562
Alignment:
Q  19 ttcaggacgtgtcaacctatacaactagaaatcagggattatacaactaattataataaatactagtgattctaatgactcagctaataattacatttaa 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  41740691 ttcatgacgtgtcaacctatacaactagaaatcagggattatacaactaattataataaatactaatgattttaatgactcagctaataattacatttaa 41740592  T
Q  119 tattggtgattctagtgactcacgccaaca 148  Q
    ||||||||||||||||||||||||||||||    
T  41740591 tattggtgattctagtgactcacgccaaca 41740562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 152 - 331
Target Start/End: Original strand, 16726128 - 16726305
Alignment:
Q  152 ggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgtttg 251  Q
    ||||||||||||||||||||||  | ||| |||||| |||||| ||| |||||| ||| ||||||||||||||  |||||   | |||||||||||||||    
T  16726128 ggttctaccaagttcccaaagtcattaaccacttccaaatatt-atcaggtgacgggactactcccattccaac-aatattcgtaggaaagtctcgtttg 16726225  T
Q  252 cgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
     ||||||||||  ||||||||||||| |||| |||||| |||||||||||||||| | ||||||||||||||||||||||    
T  16726226 ggtgtagtatcgcgtatcaaccaatttaagactactcttgattagccaccgcactacatcctaaaaggccaagatgggtt 16726305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 14883696 - 14883515
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||| |||||||||| ||||||||| || ||| |||| | |||||||||  |||||| ||| ||||||||||||||  |||||  || ||||||||| ||    
T  14883696 acggattctaccaagatcccaaagtctttaaccactttcaaatatttattaggtgacgggactactcccattccaac-aatattcataggaaagtcttgt 14883598  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| || ||| |||  |||||||||||||||||| |||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  14883597 ttgggtatagcatcgcgtatcaaccaattcaagactactcttgattaggcaccgcactacgtcctaaaaggccaagatgggtt 14883515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 3842022 - 3842202
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| |||| | |||||| ||| |||||| ||| ||||||||||||||  | |||   | ||||||||||||    
T  3842022 acgggttctaccaagttcccaaagtcattaaccactttcaaatatt-atcaggtgacgggactactcccattccaaa-agtattcgtaggaaagtctcgt 3842119  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  || ||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  3842120 ttgggtgtagtatcgcgtgtcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 3842202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 22706154 - 22705974
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||| ||||||| ||| || |||||    |||||| || ||   |  |||||| ||||    
T  22706154 acgggttctaccaagttcccaaagtcattaaccacttccgaatatt-atcgggttacaagactactcttgatccaat-aagattcgtatgaaagtttcgt 22706057  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  22706056 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 22705974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 9187005 - 9186826
Alignment:
Q  150 cgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgtt 249  Q
    |||||||||||||||||||||||| | |||| |||||| |||||| ||| ||| ||| || |||||    |||||| |  || | | |||||||||||||    
T  9187005 cgggttctaccaagttcccaaagtctacaaccacttccaaatatt-atcaggttacaagattactcttgatccaat-atcatttgtaggaaagtctcgtt 9186908  T
Q  250 tgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    || ||||||| ||  |||||||| ||||||||| |||||| |||||||||| ||||| | ||||||||||||||||||||||    
T  9186907 tgagtgtagtctcgcgtatcaactaattcaagattactcttgattagccactgcactacatcctaaaaggccaagatgggtt 9186826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 3359287 - 3359194
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||| || ||||||||||  |||||||| ||  ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  3359287 gaaagtctcgtctgagtgtagtatcgcgtatcaactaaaccaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 3359194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 238 - 331
Target Start/End: Original strand, 15080041 - 15080134
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||||||  |||||||||  |||||||| || |||||| |||||| |||||||||||||||| |||| |||||||||||||||||||    
T  15080041 gaaagtctcgtttgaatgtagtatcgcgtatcaactaagtcaagactactcttgattagccaccgcactacgtcataaaaggccaagatgggtt 15080134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 15900859 - 15900970
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||| | |||||||||| |||||| ||| ||||||||||||||  |||||   | |||||||| |||    
T  15900859 acgggttctaccaagttcccaaagtctttaaccactttcaaatatttatcaggtgacgggactactcccattccaa-caatattcgtaggaaagtcacgt 15900957  T
Q  249 ttgcgtgtagtat 261  Q
    ||| |||||||||    
T  15900958 ttgggtgtagtat 15900970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 26218699 - 26218794
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattca-agagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||| |||| ||||||||||  ||||| || |||||  |||  || | || |||||||||||||| ||||||||||||||||||||||||    
T  26218699 ggaaagtctcatttgagtgtagtatcgcgtatcgactaattccgagaaaacacccggttagccaccgcactacgtcctaaaaggccaagatgggtt 26218794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 14736391 - 14736434
Alignment:
Q  288 ctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||| |||||||||||||| | ||||||||||||||||||||||    
T  14736391 ctcggttagccaccgcactacatcctaaaaggccaagatgggtt 14736434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 23994129 - 23994221
Alignment:
Q  242 gtctcgtttgcgtgtagtatcatgtatcaaccaa-ttcaagagtactctcgatt-agccaccgcacttcgtcct-aaaaggccaagatgggtt 331  Q
    |||| ||||| |||||||||| |||||| || || ||||||| | |||| | || |||||||||||| |||||| ||||||||||||||||||    
T  23994129 gtctagtttgggtgtagtatcgtgtatcgactaaattcaagactgctcttggtttagccaccgcactacgtcctaaaaaggccaagatgggtt 23994221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 4e-63; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 25265681 - 25265500
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||| ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  25265681 acgggttctaccaagtttccaaagtctttaaccacttccgaatatttatcgggtgacaggagtactcccattccaatta-tattcgtcggaaagtctcgt 25265583  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  25265582 ttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagaggggtt 25265500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 5143750 - 5143929
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||||   || | |||||||||||||||    
T  5143750 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaattatattcga-cggaaagtctcgttt 5143848  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5143849 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 5143929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 6564683 - 6564503
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||||||||    
T  6564683 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatt-atattcgtcggaaagtctcgttt 6564585  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcg-tcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  6564584 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgttcctaaaaggccaagatgggtt 6564503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 11932242 - 11932422
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||||||||    
T  11932242 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatt-atattcgtcggaaagtctcgttt 11932340  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcg-tcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  11932341 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgttcctaaaaggccaagatgggtt 11932422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 24215459 - 24215639
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||||||||    
T  24215459 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatt-atattcgtcggaaagtctcgttt 24215557  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcg-tcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  24215558 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgttcctaaaaggccaagatgggtt 24215639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 70301 - 70121
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||| |||||||||||||  | ||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||||    
T  70301 gggttctactaagttcccaaagtcattaaccacttctgaatatttatcgggtgacgggagtactcccattccaattaacatccgtcggaaagtctcgttt 70202  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |  |||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  70201 ggttgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 70121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 4436498 - 4436319
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| || ||||||||||||||||||||| ||||||||||||||||||||| |||   ||||| ||||||||||    
T  4436498 gggttctaccaagttcccaaagtctttaaccacctccgaatatttatcgggtgacgggagtactcccattccaatta-tattcgtcggatagtctcgttt 4436400  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4436399 gagtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 4436319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 17919949 - 17919769
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| ||||||||| |||||||||||||| ||||||||||||||||||||||  |   ||||||||||||||||    
T  17919949 gggttctaccaagttcccaaagtctttaaccacttccgaacatttatcgggtgacgggagtactcccattccaattaacgttcgtcggaaagtctcgttt 17919850  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  17919849 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctagaaggccaagatgggtt 17919769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 22952777 - 22952597
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||||||||| || |||||||||||||||||||| ||||   ||||||||||||||||    
T  22952777 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtaacgggagtactcccattccaatt-atattcgtcggaaagtctcgttt 22952679  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcg-tcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  22952678 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgttcctaaaaggccaagatgggtt 22952597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 14891013 - 14891193
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| ||||||||| |||||||||||||| ||||||| |||||||||||||| |||  ||||||||||||||||    
T  14891013 gggttctaccaagttcccaaagtctttaaccacttccgaacatttatcgggtgacgggagtacgcccattccaattaacatccgtcggaaagtctcgttt 14891112  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
      ||||| ||||  |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  14891113 aggtgtattatcgcgtatcaactaaatcaagagtactctcgattagccaccgcactacgtcctaaaaggccaggataggtt 14891193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 151 - 306
Target Start/End: Complemental strand, 17660688 - 17660534
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||||||||    
T  17660688 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgactggagtactcccattccaatt-atattcgtcggaaagtctcgttt 17660590  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcact 306  Q
    | ||||||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  17660589 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcact 17660534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 15535150 - 15535331
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||| | |||||||||| |||||| ||| ||||||||||||||| |||||   | ||||||||||||    
T  15535150 acgggttctaccaagttcccaaagtctttaaccactttcaaatatttatcaggtgacgggactactcccattccaat-aatattcgtaggaaagtctcgt 15535248  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15535249 ttgggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 15535331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 26384667 - 26384846
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||| ||||||||||||||  |||||   | ||||||||||||||    
T  26384667 gggttctaccaagttcccaaagttttcaaccactttcgaatatttatcgggtgatgggactactcccattccaac-aatattcgtaggaaagtctcgttt 26384765  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||||||||||||| |||| | |||||||||||||||| |||| |||||||||||||||||||    
T  26384766 gggtgtagtatcgcgtatcaaccaattcaagactacttttgattagccaccgcactacgtcttaaaaggccaagatgggtt 26384846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 8618624 - 8618443
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||| | |||||||||| |||||| ||| ||||||||||||||  |||||   | ||||||||||||    
T  8618624 acgggttctaccaagttcccaaagtctttaaccactttcaaatatttatccggtgacgggactactcccattccaac-aatattcgtaggaaagtctcgt 8618526  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  8618525 ttgggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 8618443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 15622601 - 15622420
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| |||| | |||||||||| |||||| ||| ||||||||||||||| |||||   | ||||||||||||    
T  15622601 acgggttctaccaagttcccaaagtccttaaccactttcaaatatttatcaggtgacgggactactcccattccaat-aatattcgtaggaaagtctcgt 15622503  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15622502 ttgggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 15622420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 15607757 - 15607851
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15607757 ggaaagtctcgtttgggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 15607851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 46398597 - 46398777
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||| ||||||| ||| || |||||    |||||| || ||   | ||||||| || |    
T  46398597 acgggttctaccaagttcccaaagtcattaaccacttccgaatatt-atcgggttacaagactactcttgatccaat-aagattcgtaggaaagtttcat 46398694  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| |||||||||||| |||||||||||    
T  46398695 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggtcaagatgggtt 46398777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 6196566 - 6196386
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||| |||| || ||| || |||||    |||||| || ||   |  |||||| ||||    
T  6196566 acgggttctaccaagttcccaaagtcattaaccacttccgaatatt-atcgagttacaagactactcttgatccaat-aagattcgtatgaaagtttcgt 6196469  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  6196468 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 6196386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 8806397 - 8806303
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||| ||||||| |||||||||   |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  8806397 ggaaagtttcgtttgagtgtagtattgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 8806303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 37263409 - 37263589
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||| | ||||||||||||  |||||||| ||||||| || ||| ||| ||| || |||||    |||||| ||||||  | ||||||| || |    
T  37263409 acgggttctatccagttcccaaagtcatcaactacctccgaatgtt-atcaggttacaagactactcttgatccaat-aatatccgtaggaaagtttcat 37263506  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  37263507 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 37263589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 15911968 - 15911874
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||| |||| ||||||| ||  |||||||| ||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  15911968 ggaaagtctcatttgagtgtagtctcgcgtatcaactaattcaagattactcttgattagccaccggactacgtcctaaaaggccaagatgggtt 15911874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 331
Target Start/End: Complemental strand, 21609930 - 21609751
Alignment:
Q  150 cgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgtt 249  Q
    ||||||||||||||||||||||||  | |||||| ||||||| || ||| ||| ||| || |||||    |||||| |||||   | ||||||| || ||    
T  21609930 cgggttctaccaagttcccaaagtcattaactacctccgaatgtt-atcaggttacaagactactcttgatccaat-aatatgcgtaggaaagtttcatt 21609833  T
Q  250 tgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||  |||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  21609832 tgaatgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 21609751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 5957557 - 5957738
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||| | ||||||||||||  |||||||| ||||||| || ||| ||| ||| || |||||    |||||| ||||||  | ||||||| || |    
T  5957557 acgggttctatccagttcccaaagtcatcaactacctccgaatgtt-atcaggttacaagactactcttgatccaat-aatatccgtaggaaagtttcat 5957654  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcct-aaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| |||||| ||||||| ||||||||||    
T  5957655 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaaggctaagatgggtt 5957738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 20436581 - 20436488
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||  || ||||||||||  |||||||| ||  ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20436581 gaaagtctcgcctgagtgtagtatcgcgtatcaactaaaccaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 20436488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 3677580 - 3677488
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggt 330  Q
    ||||||||||| || ||||||||||  |||||||| |   ||||| |||||| |||||||||||||||| |||||||||||||||||||||||    
T  3677580 gaaagtctcgtctgagtgtagtatcgcgtatcaactagaccaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggt 3677488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 41433744 - 41433652
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggt 330  Q
    ||||||||||| || ||||||||||  |||||||| |   ||||| |||||| |||||||||||||||| |||||||||||||||||||||||    
T  41433744 gaaagtctcgtctgagtgtagtatcgcgtatcaactagaccaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggt 41433652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 46373810 - 46373629
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||| | ||||||||||||  |||||||| ||||||| || ||| ||| ||| || |||||    |||||| ||||||  | |||| || || |    
T  46373810 acgggttctatccagttcccaaagtcatcaactacctccgaatgtt-atcaggttacaagactactcttgatccaat-aatatccgtaggaaggtttcat 46373713  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtccta-aaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||| |||||| ||||||||||    
T  46373712 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctagaaaggctaagatgggtt 46373629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 30014151 - 30014059
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggt 330  Q
    |||| |||||| || ||||||||||  |||||||| |   ||||| |||||| |||||||||||||||| |||||||||||||||||||||||    
T  30014151 gaaactctcgtctgagtgtagtatcgcgtatcaactagaccaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggt 30014059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 331
Target Start/End: Original strand, 3243368 - 3243454
Alignment:
Q  245 tcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||| ||||||||||| |||||||| | ||||||| | |||| | ||||  |||||||  ||||||||||||||||||||||||    
T  3243368 tcgtttgagtgtagtatcacgtatcaactatttcaagacttctcttggttagtaaccgcacgacgtcctaaaaggccaagatgggtt 3243454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 331
Target Start/End: Original strand, 14396628 - 14396722
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattc-aagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| |||||||||| ||| |||||  || | |||| ||| || | |||||||||||||| |||||||| |||||||||||||||    
T  14396628 gaaagtctcgtttgagtgtagtatcgtgtgtcaactgataccaagactacacttggttagccaccgcactacgtcctaagaggccaagatgggtt 14396722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 30093877 - 30093966
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatg 327  Q
    ||||||||||| || ||||||||||  |||||||||||  ||||| |||||  |  ||||||||||||| || |||||||||||||||||    
T  30093877 gaaagtctcgtctgagtgtagtatcgcgtatcaaccaaaccaagattactcaaggctagccaccgcactacgccctaaaaggccaagatg 30093966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 12477601 - 12477639
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  12477601 ttagccaccgcactacgtcctaaaaggccaagatgggtt 12477639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 15683227 - 15683265
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  15683227 ttagccaccgcactacgtcctaaaaggccaagatgggtt 15683265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 15697658 - 15697620
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  15697658 ttagccaccgcactacgtcctaaaaggccaagatgggtt 15697620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 13109706 - 13109751
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatt 194  Q
    |||||||||||||||||||||||||  || ||||||||||||||||    
T  13109706 acgggttctaccaagttcccaaagtcctcgactacttccgaatatt 13109751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 7096077 - 7096120
Alignment:
Q  288 ctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||| |||||||||||||| | ||||||||||||||||||||||    
T  7096077 ctcggttagccaccgcactacatcctaaaaggccaagatgggtt 7096120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 9553129 - 9553167
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  9553129 ttagccaccgcactacatcctaaaaggccaagatgggtt 9553167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 13109849 - 13109887
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  13109849 ttagccaccgcactacgtcctaaaaggccaggatgggtt 13109887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 41000284 - 41000246
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  41000284 ttagccaccacactacgtcctaaaaggccaagatgggtt 41000246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 41009067 - 41009029
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  41009067 ttagccaccacactacgtcctaaaaggccaagatgggtt 41009029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 34189 - 34368
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||   ||||||||||||||||    
T  34189 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatta-tattcgtcggaaagtctcgttt 34287  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  34288 gggtgtagtatcgcgtatcaactaattcaagagtactctcaattagccaccgcactacgtcctaaaaggccaagatgggtt 34368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 5270 - 5448
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||   ||||||||||||||||    
T  5270 gggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatta-tattcgtcggaaagtctcgttt 5368  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  5369 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaagg-caagatgggtt 5448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 20893 - 21073
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    |||| |||||||||||||||||| || ||| |||||||||||||||||||||||  |||||||||||||||||||||| |||  || |||||||||||||    
T  20893 gggtcctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgatgggagtactcccattccaattaacatccgtcagaaagtctcgttt 20992  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||| ||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20993 gggtgcagtatcgagtatcaactaattcaagagtactctcgattagccaccgcactacgtcctaaaaggccaagatgggtt 21073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 31016 - 30836
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||| ||||||| || | ||  ||||||||||||    
T  31016 gggttctaccaagttcccaaagtttttaaccacttctgaatatttatcgggtgacgggagtactcccatttcaattaacatttgtcttaaagtctcgttt 30917  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  30916 gggtgtagtatcgcgtatcaactaattcaagagtactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 30836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 9e-58; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 14205402 - 14205222
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||| ||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||||||||    
T  14205402 gggttctaccaagttgccaaagtctttaaccacttccgaatatttatcgggtgacgggagtactcccattccaatt-atattcgtcggaaagtctcgttt 14205304  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcg-tcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  14205303 gggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccgcactacgttcctaaaaggccaagatgggtt 14205222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 20735871 - 20735691
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| |||||| ||| |||||||||| || ||| ||||||| ||||||  |||||   | |||  |||||||    
T  20735871 acgggttctaccaagttcccaaagtcgttaaccacttccaaat-tttatcgggttacgggactactcccgttccaac-aatattcgtaggattgtctcgt 20735774  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  20735773 ttgggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccgtactacgtcctaaaaggccaagatgggtt 20735691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 20740909 - 20740729
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| |||| | ||| |||||||||| || ||| ||||||| ||||||  |||||   | |||  |||||||    
T  20740909 acgggttctaccaagttcccaaagtcgttaaccactttcaaat-tttatcgggttacgggactactcccgttccaac-aatattcgtaggattgtctcgt 20740812  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20740811 ttgggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 20740729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 20744429 - 20744249
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| |||| | ||| |||||||||| || ||| ||||||| ||||||  |||||   | |||  |||||||    
T  20744429 acgggttctaccaagttcccaaagtcgttaaccactttcaaat-tttatcgggttacgggactactcccgttccaac-aatattcgtaggattgtctcgt 20744332  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  20744331 ttgggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccgtactacgtcctaaaaggccaagatgggtt 20744249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 6665883 - 6665702
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||| |||  ||||| ||  |||||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||||||    
T  6665883 acgggttctaccaagttcccagagtcatcaaccacgaccgaatatttatcgggtgacgggagtactcccattccaatt-atattcgtcggaaagtctcgt 6665785  T
Q  249 ttgcgtgtagtatcatgtatcaaccaatt-caagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| |||||| |||  || || || |||| |||||  || || | |||||||||||||| |||||||||| |||||||||||||    
T  6665784 ttgggtgtagcatcgcgtgtcgactaattccaagacaacacttggttagccaccgcactacgtcctaaaa-gccaagatgggtt 6665702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 6673545 - 6673364
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||| |||  ||||| ||  |||||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||||||    
T  6673545 acgggttctaccaagttcccagagtcatcaaccacggccgaatatttatcgggtgacgggagtactcccattccaatt-atattcgtcggaaagtctcgt 6673447  T
Q  249 ttgcgtgtagtatcatgtatcaaccaatt-caagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| |||||| |||  || || || |||| |||||  || || | |||||||||||||| |||||||||| |||||||||||||    
T  6673446 ttgggtgtagcatcgcgtgtcgactaattccaagacaacacttggttagccaccgcactacgtcctaaaa-gccaagatgggtt 6673364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 238 - 331
Target Start/End: Original strand, 22105203 - 22105296
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||| || ||||||||||  |||||||| ||  ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  22105203 gaaagtctcgtatgagtgtagtatcgcgtatcaactaaaccaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 22105296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 24709523 - 24709599
Alignment:
Q  239 aaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaa 315  Q
    ||||||||||||  ||||||||||   ||||||||||||||||| |||||| |||||||||||||||| || |||||    
T  24709523 aaagtctcgtttaagtgtagtatcgcctatcaaccaattcaagaatactcttgattagccaccgcactacgccctaa 24709599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 22105117 - 22105168
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggt 202  Q
    ||||||||||||||||||||||| || ||| ||||||||| |||||||||||    
T  22105117 gggttctaccaagttcccaaagtctttaaccacttccgaacatttatcgggt 22105168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 1857 - 1676
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| | |||||||||||||||| ||   || |||||||||||||||    
T  1857 acgggttctaccaagttcccaaagtctttaaccacttccgaatatttatcgggtgacggaagtactcccattccaactacattc-atcggaaagtctcgt 1759  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  ||||||||  ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  1758 ttgggtgtagtatcgcgtatcaacttattcaagagtactctcgattagccaccacactacgtcctaaaaggccaagatgggtt 1676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 2001 - 2181
Alignment:
Q  150 cgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgtt 249  Q
    |||||||||||||||||||||||| || ||| |||| | |||| ||||| |||||| ||| ||||||||||||||  |||||   | |||||||||||||    
T  2001 cgggttctaccaagttcccaaagtctttaaccactttcaaataattatcaggtgacgggactactcccattccaaa-aatattcgtaggaaagtctcgtt 2099  T
Q  250 tgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    || ||||||||||  |||||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||    
T  2100 tgggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccgcaatacgtcctaaaaggccaagatgggtt 2181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 16683 - 16504
Alignment:
Q  151 gggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgttt 250  Q
    ||||||||||||||||||||||| || ||| |||| | |||||||||| |||||| ||| ||||||||||||||  |||||   | | ||||||||||||    
T  16683 gggttctaccaagttcccaaagtctttaaccactttcaaatatttatcaggtgacgggactactcccattccaac-aatattcgtagaaaagtctcgttt 16585  T
Q  251 gcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    | ||||||||||  |||||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||    
T  16584 gggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccgcattacgtcctaaaaggccaagatgggtt 16504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 152 - 331
Target Start/End: Complemental strand, 17183 - 17005
Alignment:
Q  152 ggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgtttg 251  Q
    |||||||||||||||||||||| || ||| |||| | ||||||||||  ||||| ||| ||||||||||||||  |||||   | |||||||||||||||    
T  17183 ggttctaccaagttcccaaagtctttaaccactttcaaatatttatcaagtgacgggactactcccattccaac-aatattcgtaggaaagtctcgtttg 17085  T
Q  252 cgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
     ||||||||||  |||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  17084 ggtgtagtatcgcgtatcaaccaattcaagactactctttattagccaccgcactacgtcctaaaaggccaagatgggtt 17005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 27858 - 28038
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||| |||||||||||||||||||  | ||| |||| |||||||| ||| |||||| ||| ||||||||||||||  | |||   | ||||||||||||    
T  27858 acgggctctaccaagttcccaaagtcattaaccactttcgaatatt-atcaggtgacgggactactcccattccaac-agtattcgtaggaaagtctcgt 27955  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  27956 ttgggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccgcactacgtcctaaaaggccatgatgggtt 28038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 19720 - 19901
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    ||||||||||||||||||||||||| || ||| |||| | ||||||||| ||||||  ||| ||||||||||||||  |||||   | ||||||||||||    
T  19720 acgggttctaccaagttcccaaagtctttaaccactttcaaatatttattgggtgaagggactactcccattccaac-aatattcgtaggaaagtctcgt 19818  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||  ||||||||||  |||||||||||||||||| |||||| ||||||||||| |||| |||||||||| | |||||||||||    
T  19819 ttaggtgtagtatcgcgtatcaaccaattcaagactactcttgattagccaccacactacgtcctaaaatggcaagatgggtt 19901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 235 - 331
Target Start/End: Original strand, 31325 - 31421
Alignment:
Q  235 tcggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||| |||| ||||||||||  |||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  31325 tcggaaagtctcatttgggtgtagtatcgcgtatcaactaattcaagagtactctcgattagccaccacactacgtcctaaaaggccaagatgggtt 31421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 23169 - 23349
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatttatcgggtgacaggagtactcccattccaattaatatctatcggaaagtctcgt 248  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||| ||||||| ||| || |||||    |||||| || ||   |  |||||| ||||    
T  23169 acgggttctaccaagttcccaaagtcattaaccacttccgaatatt-atcgggttacaagactactcttgatccaat-aagattcgtatgaaagtttcgt 23266  T
Q  249 ttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  23267 ttgagtgtagtatcgcgtatcaactaattcaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 23349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 186067 - 186161
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||||||| ||||||||||  |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  186067 ggaaagtctcgtttgggtgtagtatcgcgtatcaactaattcaagattactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 186161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 185981 - 186026
Alignment:
Q  149 acgggttctaccaagttcccaaagttttcaactacttccgaatatt 194  Q
    ||||||||||||||||||||||||| | |||| |||||| ||||||    
T  185981 acgggttctaccaagttcccaaagtctacaaccacttccaaatatt 186026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1818 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1818
Description:

Target: scaffold1818; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 312 - 406
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||||||| ||||||||||   ||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  312 ggaaagtctcgtttgagtgtagtatcgcatatcaactaattcaagattactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 428 - 522
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||||||| ||||||||||  |||||||| ||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  428 ggaaagtctcgtttgggtgtagtatcgcgtatcaactaattcaagattactcttgataagccaccgcactacgtcctaaaaggccaagatgggtt 522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 329
Target Start/End: Complemental strand, 301077 - 300985
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatggg 329  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||| |||||| ||| |||||||||||| ||||||||||||| ||||||||    
T  301077 ggaaagtctcgtttgggtgtagtatcgtgtatcaactaattcaagattactcttgatcagccaccgcactacgtcctaaaaggctaagatggg 300985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 14772 - 14866
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||| |||| ||||||| ||  |||||||| ||||||||| |||||| |||||||||||||||| |||||||||||| |||||||||||    
T  14772 ggaaagtctcatttgagtgtagtctcgagtatcaacaaattcaagattactcttgattagccaccgcactacgtcctaaaaggacaagatgggtt 14866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 9105 - 9011
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||| ||||||||| |||| || ||  |||||||| ||||||||| |||||| |||||||||||||||  ||||||||||||||||||||||||    
T  9105 ggaaactctcgtttgagtgttgtctcgcgtatcaactaattcaagattactcttgattagccaccgcacaacgtcctaaaaggccaagatgggtt 9011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 3546 - 3453
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||||||  |||||||||  |||||||| || |||||| |||||| |||||||||||||||| |||| |||| ||||||||||||||    
T  3546 gaaagtctcgtttgaatgtagtatcgcgtatcaactaagtcaagactactcttgattagccaccgcactacgtcataaagggccaagatgggtt 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 11287 - 11194
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||| || ||||||||||  |||||||| |   ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  11287 gaaagtctcgtctgagtgtagtatcgcgtatcaactataccaagactactcttgattagccaccgcactacgtcctaaaaggccaagatgggtt 11194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 22623 - 22529
Alignment:
Q  237 ggaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||| || |||| ||| ||||||  |||||||| || |||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  22623 ggaaagtttcatttgagtgcagtatcgcgtatcaactaaatcaagactactcttgattagccaccgcactacgtcctaaaaggctaagatgggtt 22529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 331
Target Start/End: Original strand, 512 - 605
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||| || || |||||||||| ||||||||| ||  ||||| |||||  ||||||||||| |||| | |||||||||||||||| |||||    
T  512 gaaagtcttgtctgagtgtagtatcgtgtatcaactaaaccaagattactcatgattagccaccacactacatcctaaaaggccaagaggggtt 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 331
Target Start/End: Original strand, 29732 - 29825
Alignment:
Q  238 gaaagtctcgtttgcgtgtagtatcatgtatcaaccaattcaagagtactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    ||||||||||| |  ||||||||||  |||||||| ||  ||||| |||||  ||| |||||||||||| ||||||||||||| ||||||||||    
T  29732 gaaagtctcgtcttagtgtagtatcgcgtatcaactaaaccaagattactcatgataagccaccgcactacgtcctaaaaggctaagatgggtt 29825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 7348 - 7391
Alignment:
Q  288 ctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  7348 ctcggttagccaccgcactacgtcctaaaaggccaagatgggtt 7391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 331
Target Start/End: Complemental strand, 151704 - 151657
Alignment:
Q  284 tactctcgattagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  151704 tactcttgattagtcaccgcactacgtcctaaaaggccaagatgggtt 151657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 4423 - 4461
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  4423 ttagccaccgcactacgtcctaaaaggccaagatgggtt 4461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 4281 - 4322
Alignment:
Q  150 cgggttctaccaagttcccaaagttttcaactacttccgaat 191  Q
    |||||||||||||||||||||||| | |||| ||||||||||    
T  4281 cgggttctaccaagttcccaaagtctacaaccacttccgaat 4322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 30440 - 30402
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  30440 ttagccaccgcactacgtcctaaaaggccaagatgggtt 30402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 135936 - 135974
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  135936 ttagccaccgcactacgtcctaaaaggccaagatgggtt 135974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 144898 - 144936
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  144898 ttagccaccgcactacgtcctaaaaggccaagatgggtt 144936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 12023 - 11929
Alignment:
Q  240 aagtctcgtttgcgtgtagtatcatgtatcaaccaa-ttcaagagtactctcgatt-agccaccgcacttcgtcct-aaaaggccaagatgggtt 331  Q
    |||||| ||||| |||||||||||  |||| ||||| ||||||| | |||| | || |||||||||||| |||||| ||||||||||||||||||    
T  12023 aagtctagtttgagtgtagtatcacatatcgaccaaattcaagactgctcttggtttagccaccgcactacgtcctaaaaaggccaagatgggtt 11929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 74701 - 74739
Alignment:
Q  293 ttagccaccgcacttcgtcctaaaaggccaagatgggtt 331  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  74701 ttagccaccgcactacgtcctaaaaggccaacatgggtt 74739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University