View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19009_high_95 (Length: 210)
Name: NF19009_high_95
Description: NF19009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19009_high_95 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-103
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 33178989 - 33178793
Alignment:
| Q |
1 |
ctccatcaccaaagaaaccacctgcacaagtatattgtcccccaccaccatcaccatcctacatatacataaccggaccaccggggaacttgtatccagt |
100 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33178989 |
ctccatcaccaaagaaaccaccttcacaagtatattgtcccccaccaccatcaccatcctacatatacataaccggaccaccggggaacttgtatccagt |
33178890 |
T |
|
| Q |
101 |
cgatgagaatttcagcggagcaattcatcgccaccaccggagcttcgcggtcttattgttgccatttgcggttgctcttttgggaataatttctttt |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33178889 |
cgatgagaatttcagcggagcaattcatcgccaccaccggagcttcacggtcttattgttgccatttgcggttgctcttttgggaataatttctttt |
33178793 |
T |
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