View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19009_low_100 (Length: 202)

Name: NF19009_low_100
Description: NF19009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19009_low_100
NF19009_low_100
[»] chr5 (16 HSPs)
chr5 (1-201)||(30060967-30061167)
chr5 (1-202)||(30750240-30750441)
chr5 (1-202)||(30400671-30400869)
chr5 (1-195)||(30436417-30436608)
chr5 (1-195)||(30712739-30712930)
chr5 (1-198)||(29853912-29854106)
chr5 (1-195)||(30337836-30338027)
chr5 (1-195)||(30676599-30676790)
chr5 (1-202)||(30241692-30241890)
chr5 (1-198)||(29872775-29872969)
chr5 (1-195)||(30484005-30484196)
chr5 (38-200)||(30207121-30207280)
chr5 (26-198)||(17417929-17418098)
chr5 (135-201)||(30521067-30521133)
chr5 (135-201)||(30561407-30561473)
chr5 (150-197)||(17983500-17983547)
[»] chr7 (1 HSPs)
chr7 (1-202)||(26707929-26708127)
[»] chr4 (2 HSPs)
chr4 (1-202)||(20295893-20296091)
chr4 (150-194)||(13617200-13617244)
[»] chr3 (2 HSPs)
chr3 (163-202)||(25293411-25293450)
chr3 (68-113)||(25293325-25293370)
[»] chr1 (2 HSPs)
chr1 (150-201)||(7581176-7581227)
chr1 (150-202)||(7100018-7100070)


Alignment Details
Target: chr5 (Bit Score: 133; Significance: 2e-69; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 30061167 - 30060967
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    |||||||| |||||||||| |||  ||||| | |  |||||| |||| || || ||||||| || |||||||||||||||||||||||||||||||||||    
T  30061167 ttggaatcagggttaacacgagagaaatggaacaaattgaaacctgtgttgtcttgtggatccaaaggtagttccattttagtgtccacccgtgatgaag 30061068  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggaca 200  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30061067 ttgttgcaacgatcacaggaacataccaaactcatcatcgtttgtcttctctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggaca 30060968  T
Q  201 t 201  Q
    |    
T  30060967 t 30060967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 30750441 - 30750240
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    |||||||| |||||||||| |||  ||||| | |  |||||| |||| || || ||||||| || |||||||||||||||| ||||||||||||||||||    
T  30750441 ttggaatcagggttaacacgagagaaatggaacaaattgaaacctgtgttgtcttgtggatccaaaggtagttccattttattgtccacccgtgatgaag 30750342  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggaca 200  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30750341 ttgttgcaacaatcacaggaacatgccaaactcatcatcgtttgtcttctctctctgatagtgaatgttggctgttgttcgaacaatatgcatttggaca 30750242  T
Q  201 tt 202  Q
    ||    
T  30750241 tt 30750240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 30400869 - 30400671
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    ||||||||||||||||||||||||  |||| ||  ||||||||||||||| ||||||||||  | ||||||||||||||||||||||||||||||| |||    
T  30400869 ttggaatctgggttaacacaagatagatggaatcgtttgaaatctgttttgtcgtgtggatcaaaaggtagttccattttagtgtccacccgtgataaag 30400770  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggaca 200  Q
    |||||||||||||||   |||||| |||| ||||   || ||||||| |||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  30400769 ttgttgcaacaatcatgggaacatgccaagctca--ctc-tttgtctggtctctctgatagtgaatgttggttgttgttcaaagaatatgcattgggaca 30400673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 30436608 - 30436417
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    ||||||| ||||||||||||||||  |||||||  ||||||||||||||| ||||||||||  | |||||||||||||||||||||||| |||||||| |    
T  30436608 ttggaatttgggttaacacaagatagatgggatcatttgaaatctgttttgtcgtgtggatcaaaaggtagttccattttagtgtccactcgtgatgagg 30436509  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcattt 195  Q
     ||||||||||||||   ||||||   ||||   ||| ||||||||| |||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  30436508 atgttgcaacaatcatgggaacatgggaaac---tcaccgtttgtctggtctctctgatagtgactgttggttgttgttcaaacaacatgcattt 30436417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 30712739 - 30712930
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    ||||||||||||||||||||||||  |||||||  ||| ||||||||||| ||||||||||  | |||||||||||||||| |||||||||||||||| |    
T  30712739 ttggaatctgggttaacacaagatagatgggatcgtttaaaatctgttttgtcgtgtggatcaaaaggtagttccattttattgtccacccgtgatgagg 30712838  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcattt 195  Q
    |||||||||| ||||   ||||||   ||||   ||| ||||||||| |||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  30712839 ttgttgcaactatcatgggaacatgggaaac---tcaccgtttgtctggtctctctgatagtgactgttggttgttgttcaaacaacatgcattt 30712930  T

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Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 29854106 - 29853912
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    ||||||| |||||||||||||||| ||||| ||  |||||| ||||| || ||||||||||  | |||||||||||||||||||||||| |||||| ||     
T  29854106 ttggaatatgggttaacacaagataaatggaatcatttgaagtctgtgttgtcgtgtggatcaaaaggtagttccattttagtgtccactcgtgataaat 29854007  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttgga 198  Q
    |||||||||||||||   |||||| |||| ||||   || ||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  29854006 ttgttgcaacaatcatgggaacatgccaagctca--ctc-tttgtatggtctctctgatagtgaatgttggttgttgttcaaagaatatgcatttgga 29853912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 30337836 - 30338027
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    ||||||||||||||||||||||||  |||| ||  ||||||||||||||| ||||||||||  | |||||||||||||||||||||||| |||||||| |    
T  30337836 ttggaatctgggttaacacaagatagatggaatcgtttgaaatctgttttgtcgtgtggatcaaaaggtagttccattttagtgtccactcgtgatgagg 30337935  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcattt 195  Q
     ||||||| ||||||   | ||||   |||    ||| ||||||||| |||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  30337936 atgttgcatcaatcatggggacatgggaaa---gtcaccgtttgtctggtctctctgatagtgattgttggttgttgttcaaacaacatgcattt 30338027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 30676599 - 30676790
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    ||||||||||||||||||||||||  |||| ||  ||||||||||||||| ||||||||||  | |||||||||||||||||||||||| |||||||| |    
T  30676599 ttggaatctgggttaacacaagatagatggaatcgtttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgagg 30676698  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcattt 195  Q
     ||||||| ||||||   | ||||   |||    ||| ||||||||| |||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  30676699 atgttgcatcaatcatggggacatgggaaa---gtcaccgtttgtctagtctctctgatagtgattgttggttgttgttcaaacaacatgcattt 30676790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 30241692 - 30241890
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    |||||||| |||||||||| |||  ||||| | || ||||||||||| || || ||||||| || |||||||||||||||||| ||||| |||||||| |    
T  30241692 ttggaatcagggttaacacgagagaaatggaacacattgaaatctgtgttgtcatgtggatccaaaggtagttccattttagtatccactcgtgatgagg 30241791  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggaca 200  Q
    |||||||||||||||||| ||||    ||||   ||| ||||| ||| ||||||| ||   ||||||||||||||||||| |||||||||||||||||||    
T  30241792 ttgttgcaacaatcacaaaaacaagggaaac---tcaccgtttatctggtctctccgaggatgaatgttggttgttgttcaaacaatatgcatttggaca 30241888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 29872969 - 29872775
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    |||||||||||  ||||||| ||| | ||| ||  |||||| ||||| || ||||||||||  | ||||||||||||||||||||||||||||||| |||    
T  29872969 ttggaatctggactaacacatgataagtggaatcatttgaagtctgtgttgtcgtgtggatcaaaaggtagttccattttagtgtccacccgtgataaag 29872870  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttgga 198  Q
    ||||||||||||||    |||||| |||| ||||   || ||||||| || ||||||||||||||||||||||||||||| || ||||||||||||||    
T  29872869 ttgttgcaacaatcgtgggaacatgccaagctca--ctc-tttgtctggtatctctgatagtgaatgttggttgttgttcaaagaatatgcatttgga 29872775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 30484196 - 30484005
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    ||||||||||||||||||||||||  |||| ||  ||||||||||||||| ||||||||||  | |||||||||||||||||||||||| |||||||| |    
T  30484196 ttggaatctgggttaacacaagatagatggaatcgtttgaaatctgttttgtcgtgtggatcaaaaggtagttccattttagtgtccactcgtgatgagg 30484097  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcattt 195  Q
     ||||||||||||||   | ||||   |||    ||| ||||| ||| ||||||| |||||||| ||||||||||||||| ||||| ||||||||    
T  30484096 atgttgcaacaatcatggggacatgggaaa---gtcaccgtttatctggtctctcagatagtgattgttggttgttgttcaaacaacatgcattt 30484005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 30207280 - 30207121
Alignment:
Q  38 tgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaagttgttgcaacaatcacaagaacataccaaactcatca 137  Q
    ||||||| || ||||||||||||| || |||||||||||||||||||||||| |||||||| |||||||| || ||||   |||||| |||  |   |||    
T  30207280 tgaaatcagtgttatcgtgtggatccaaaggtagttccattttagtgtccactcgtgatgaggttgttgcgacgatcatgggaacatgccacgc---tca 30207184  T
Q  138 tcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggaca 200  Q
    || ||| | |  ||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  30207183 tcctttatatgttctctctgataatgaatgttggttgttgttcaaacaatatgcatttggaca 30207121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 17417929 - 17418098
Alignment:
Q  26 aatgggatactttgaaatctgt-tttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaagttgttgcaacaatcacaagaacat 124  Q
    ||||| |||| |||||||| || ||||| |||||||| || |||||||||||||||||||||||| |||||||| ||||||||  ||||||   ||||||    
T  17417929 aatggaatacgttgaaatcagtgtttat-gtgtggatccaaaggtagttccattttagtgtccactcgtgatgaggttgttgcggcaatcatgggaacat 17418027  T
Q  125 accaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttgga 198  Q
      ||| || ||| |   || | | |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  17418028 gtcaagcttatcct---ttatatggtctctctgataatgaatgttggttgttgttcaaacaatatgcatttgga 17418098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 30521067 - 30521133
Alignment:
Q  135 tcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggacat 201  Q
    ||||| ||||||| |||| |||||   ||||||||||||||||||| |||||||||||||| |||||    
T  30521067 tcatcatttgtctggtctatctgaatatgaatgttggttgttgttcaaacaatatgcatttcgacat 30521133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 30561407 - 30561473
Alignment:
Q  135 tcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggacat 201  Q
    ||||| ||||||| |||| |||||   ||||||||||||||||||| |||||||||||||| |||||    
T  30561407 tcatcatttgtctggtctatctgaatatgaatgttggttgttgttcaaacaatatgcatttcgacat 30561473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 17983547 - 17983500
Alignment:
Q  150 tctctctgatagtgaatgttggttgttgttcgaacaatatgcatttgg 197  Q
    ||||||||| | |||||||| |||||||||| ||||||||||||||||    
T  17983547 tctctctgacaatgaatgttagttgttgttcaaacaatatgcatttgg 17983500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 26708127 - 26707929
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    ||||||| ||||||||||||||||  |||| ||  ||||||||||||||| || |||||||  | |||||||||||||||||||||||| |||||| | |    
T  26708127 ttggaatatgggttaacacaagatagatggaatcgtttgaaatctgttttgtcctgtggatcaaaaggtagttccattttagtgtccactcgtgataagg 26708028  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggaca 200  Q
     ||||||||||||||   |||||| |||| ||||   || ||||||| |||||||||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  26708027 atgttgcaacaatcatgggaacatgccaagctca--ctc-tttgtctggtctctctgatagtgactgttggttgttgttcaaacaacatgcatttagaca 26707931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 20295893 - 20296091
Alignment:
Q  1 ttggaatctgggttaacacaagatcaatgggatactttgaaatctgttttatcgtgtggatacacaggtagttccattttagtgtccacccgtgatgaag 100  Q
    |||||||||||||||||||  |||  ||||  |  ||||||||||||||| || |||||||  | ||||||||||||||||||||| || |||||| | |    
T  20295893 ttggaatctgggttaacacccgatatatggactcgtttgaaatctgttttgtcatgtggatcaaaaggtagttccattttagtgtcaactcgtgataagg 20295992  T
Q  101 ttgttgcaacaatcacaagaacataccaaactcatcatcgtttgtcttgtctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggaca 200  Q
     ||||||||||||||   |||||| |||| ||||   || ||||||| |||||||| | ||||| ||||||||||||||| ||||| |||||||| ||||    
T  20295993 atgttgcaacaatcatgggaacatgccaagctca--ctc-tttgtctggtctctcttacagtgattgttggttgttgttcaaacaacatgcatttagaca 20296089  T

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Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 13617244 - 13617200
Alignment:
Q  150 tctctctgatagtgaatgttggttgttgttcgaacaatatgcatt 194  Q
    ||||| |||| ||||||||||||| |||||| |||||||||||||    
T  13617244 tctctatgatggtgaatgttggttattgttcaaacaatatgcatt 13617200  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 25293411 - 25293450
Alignment:
Q  163 gaatgttggttgttgttcgaacaatatgcatttggacatt 202  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  25293411 gaatgttggttgttgttcaaacaatatgcatttggacatt 25293450  T

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Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 25293325 - 25293370
Alignment:
Q  68 gtagttccattttagtgtccacccgtgatgaagttgttgcaacaat 113  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||    
T  25293325 gtagttccattttagtgtccactcgtgatgaggttgttgcgacaat 25293370  T

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Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 7581176 - 7581227
Alignment:
Q  150 tctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggacat 201  Q
    ||||||||||  |||||||||||| |||||| ||||||||||||||||||||    
T  7581176 tctctctgatgatgaatgttggttattgttcaaacaatatgcatttggacat 7581227  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 7100070 - 7100018
Alignment:
Q  150 tctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggacatt 202  Q
    ||||||||||  ||| || |||||||||||| |||||||||||||||||||||    
T  7100070 tctctctgatcatgagtgctggttgttgttcaaacaatatgcatttggacatt 7100018  T

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