View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19009_low_5 (Length: 600)

Name: NF19009_low_5
Description: NF19009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19009_low_5
NF19009_low_5
[»] chr3 (18 HSPs)
chr3 (1-589)||(4271769-4272358)
chr3 (3-133)||(42346665-42346798)
chr3 (332-435)||(25713426-25713529)
chr3 (330-437)||(24574904-24575011)
chr3 (341-438)||(33119622-33119719)
chr3 (361-437)||(6784086-6784162)
chr3 (343-422)||(24150832-24150911)
chr3 (341-422)||(19552148-19552229)
chr3 (341-422)||(26555817-26555898)
chr3 (341-422)||(35730935-35731016)
chr3 (341-422)||(36055007-36055088)
chr3 (341-422)||(38682429-38682510)
chr3 (365-421)||(34292505-34292561)
chr3 (329-413)||(45215410-45215494)
chr3 (341-425)||(50900444-50900528)
chr3 (341-382)||(43151162-43151203)
chr3 (349-381)||(28146300-28146332)
chr3 (361-425)||(30588862-30588926)
[»] chr7 (10 HSPs)
chr7 (331-437)||(31494232-31494338)
chr7 (341-437)||(47031248-47031344)
chr7 (336-431)||(24939640-24939735)
chr7 (362-437)||(36355468-36355543)
chr7 (354-438)||(32630714-32630798)
chr7 (342-438)||(48545802-48545899)
chr7 (349-416)||(32630649-32630716)
chr7 (341-422)||(151861-151942)
chr7 (341-422)||(27418642-27418723)
chr7 (342-422)||(30110807-30110887)
[»] chr2 (10 HSPs)
chr2 (341-437)||(27090638-27090734)
chr2 (332-438)||(2372963-2373069)
chr2 (329-438)||(30046113-30046222)
chr2 (329-438)||(30137157-30137266)
chr2 (332-438)||(24936122-24936228)
chr2 (332-438)||(25684806-25684912)
chr2 (349-413)||(2485652-2485716)
chr2 (332-415)||(18176476-18176559)
chr2 (334-422)||(29940941-29941029)
chr2 (341-437)||(38822919-38823016)
[»] chr5 (4 HSPs)
chr5 (334-438)||(7857021-7857125)
chr5 (364-421)||(9689337-9689394)
chr5 (341-381)||(6902692-6902732)
chr5 (341-422)||(40410593-40410674)
[»] chr1 (6 HSPs)
chr1 (332-437)||(9191125-9191230)
chr1 (341-415)||(51826843-51826917)
chr1 (341-422)||(26882826-26882907)
chr1 (332-413)||(27198265-27198346)
chr1 (341-422)||(45318463-45318544)
chr1 (334-422)||(52705389-52705477)
[»] chr8 (13 HSPs)
chr8 (354-434)||(14723940-14724020)
chr8 (253-334)||(12185574-12185655)
chr8 (253-334)||(12430002-12430083)
chr8 (334-435)||(24296639-24296740)
chr8 (253-334)||(12174065-12174143)
chr8 (253-334)||(12418493-12418571)
chr8 (333-422)||(2112786-2112875)
chr8 (341-422)||(42274975-42275056)
chr8 (349-435)||(38806866-38806952)
chr8 (341-422)||(1606013-1606094)
chr8 (341-422)||(29260276-29260357)
chr8 (342-422)||(43605364-43605444)
chr8 (366-438)||(23185725-23185797)
[»] chr6 (1 HSPs)
chr6 (332-438)||(35164798-35164904)
[»] chr4 (3 HSPs)
chr4 (354-437)||(5116977-5117060)
chr4 (341-422)||(8584005-8584086)
chr4 (341-413)||(28847111-28847183)
[»] scaffold0016 (1 HSPs)
scaffold0016 (341-422)||(81782-81863)


Alignment Details
Target: chr3 (Bit Score: 493; Significance: 0; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 1 - 589
Target Start/End: Original strand, 4271769 - 4272358
Alignment:
Q  1 aggttgataaatttgttttcagaaagaataattggaaaataagagagaggaaacaaaagaacaagtttgttgcgaagaagaagagtaaattgactcatga 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4271769 aggttgataaatttgttttcagaaagaatgattggaaaataagagagaggaaacaaaagaacaagtttgttgcgaagaagaagagtaaattgactcgtga 4271868  T
Q  101 gcttgatattcatggaattggttcctccaagtatagnnnnnnnaactcgtaccattattgtacttaatcgagattcagaaaaagagacaatgggattaag 200  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  4271869 gcttgatattcatggaattggttcctccaagtatagtttttttaactcgtaccattgctgtacttaatcgagattcaaaaaaagagacaatgggattaag 4271968  T
Q  201 ctgaatctggattggatttgggtttaagctgaataattttctattgcaacttaacagttccaccaacaatgatttttcagcaaagtgtctatggaactct 300  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4271969 ctgaatctggattggatttgggtttaagctgaatagttttctattgcagcttaacagttccaccaacaatgatttttcagcaaagtgtctatggaactct 4272068  T
Q  301 ttccaatctggaa-gcagcagaagcaaaagacttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttg 399  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4272069 ttccaatctggaaagcagtagaagcaaaagacttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttg 4272168  T
Q  400 aagtattcaatcaagatctttaaagattagaaataatttatgcggtcttactcttcacaagggtgattccccttggactactttggccctgaagtcgaat 499  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  4272169 aagtattcaatcaagatttttaaagattagaaataattcatgcggtcttactcttcgcaagggtgattccccttggactactttggccctgaagtcaaat 4272268  T
Q  500 cttcgcaaattgtgaccaaatcctcagaactgggatgtcacgcctctagggaagggttttttcgagttccattttaacacagttgatgat 589  Q
    || ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  4272269 ctccgcaaattgtggccaaatcttcagaactgggatgtcacacctctagggaagggttttttcgagttccattttaacacggttgatgat 4272358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 42346665 - 42346798
Alignment:
Q  3 gttgataaatttgttttcagaaagaataat---tggaaaataagagagaggaaacaaaagaacaagtttgttgcgaagaagaagagtaaattgactcatg 99  Q
    |||||||| ||||| ||||||| |||||||   |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  42346665 gttgataagtttgtgttcagaaggaataatgtttggaaaatcagagagaggaaacaaaagaacaagtttgtagcgaagaagaagagtaaatcgacccatg 42346764  T
Q  100 agcttgatattcatggaattggttcctccaagta 133  Q
    ||||||| |||||||||||||| |||||||||||    
T  42346765 agcttgacattcatggaattgggtcctccaagta 42346798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 332 - 435
Target Start/End: Complemental strand, 25713529 - 25713426
Alignment:
Q  332 ttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaa 431  Q
    |||||||| ||||||| |||||||||| |||||||||||||||| ||||| || ||||||||||||||| |||||| |||||||| || |||||||||||    
T  25713529 ttaggagggtgtattgaattgggatttcgaaggattttaaaagagtttttagttatagaaaaatcttgaggtattccatcaagattttaaaagattagaa 25713430  T
Q  432 ataa 435  Q
    ||||    
T  25713429 ataa 25713426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 437
Target Start/End: Complemental strand, 24575011 - 24574904
Alignment:
Q  330 acttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattag 429  Q
    ||||||| || || |||| |||||||||| |||| ||||||||||| ||||| || ||| |||||||||||  |||||||||||||| || |||||||||    
T  24575011 acttagggggatgaattgaattgggattttgaagaattttaaaagactttttagttataaaaaaatcttgagatattcaatcaagattttaaaagattag 24574912  T
Q  430 aaataatt 437  Q
    ||||||||    
T  24574911 aaataatt 24574904  T

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Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 438
Target Start/End: Complemental strand, 33119719 - 33119622
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaataattt 438  Q
    ||||||| |||||||| | ||||||||||||||||| |||| || ||| |||||| | || ||||||||||||||| || ||||||||||||||||||    
T  33119719 tgtattgaattgggatattgaaggattttaaaagatattttagttataaaaaaatttcgaggtattcaatcaagattttaaaagattagaaataattt 33119622  T

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Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 361 - 437
Target Start/End: Complemental strand, 6784162 - 6784086
Alignment:
Q  361 aaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaataatt 437  Q
    |||||||||| |||| ||||| || ||| |||||||||||  |||||||||||||| || |||||||||||||||||    
T  6784162 aaggattttataagactttttagttatacaaaaatcttgagatattcaatcaagattttaaaagattagaaataatt 6784086  T

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Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 24150911 - 24150832
Alignment:
Q  343 tattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||| |||||  ||||||||||||||||||||| ||  || ||||||||||  ||||||||||||||| |||||    
T  24150911 tattggattgagatttcaaaggattttaaaagatttttttgttttataaaaatcttgtggtattcaatcaagatttttaa 24150832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 19552229 - 19552148
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  |||||||||||||||||||||  |  || |||| |||||  ||||||||||||||| |||||    
T  19552229 tgtattggattgagattttaaaggattttaaaagatttttttattttataaaagtcttgtggtattcaatcaagatttttaa 19552148  T

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Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 422
Target Start/End: Original strand, 26555817 - 26555898
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  ||||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  26555817 tgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 26555898  T

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Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 422
Target Start/End: Original strand, 35730935 - 35731016
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  ||||||||||||||||||||| ||  || |||| |||||   |||||||||||||| |||||    
T  35730935 tgtattggattgagatttcaaaggattttaaaagatttttttgttttataaaagtcttgtgatattcaatcaagatttttaa 35731016  T

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Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 36055088 - 36055007
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  ||||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  36055088 tgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 36055007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 422
Target Start/End: Original strand, 38682429 - 38682510
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    ||||||| |||| |||||  ||||||||||||||| ||||| ||  || ||||||||||  ||||||||||||||| |||||    
T  38682429 tgtattgtattgagatttcaaaggattttaaaagacttttttgttttaaaaaaatcttgtggtattcaatcaagatttttaa 38682510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 421
Target Start/End: Complemental strand, 34292561 - 34292505
Alignment:
Q  365 attttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatcttta 421  Q
    |||||||||||||||||   |||| |||||||||| |||||||||||||||| ||||    
T  34292561 attttaaaagattttttaaaaataaaaaaatcttgtagtattcaatcaagattttta 34292505  T

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Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 45215494 - 45215410
Alignment:
Q  329 gacttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaa 413  Q
    ||||||||||| ||||||  |||  |||||| | ||||||||||||| |||||  ||||| ||||||||||  ||||||||||||    
T  45215494 gacttaggagggtgtattaaattaagatttgaagggattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaa 45215410  T

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Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 425
Target Start/End: Complemental strand, 50900528 - 50900444
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaaga 425  Q
    |||||||||||  |||||  ||||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| ||||||||    
T  50900528 tgtattggattaagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaaga 50900444  T

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Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 43151162 - 43151203
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttg 382  Q
    ||||||| |||||||||| |||||||||||||||| ||||||    
T  43151162 tgtattgaattgggattttgaaggattttaaaagactttttg 43151203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 349 - 381
Target Start/End: Complemental strand, 28146332 - 28146300
Alignment:
Q  349 attgggatttggaaggattttaaaagatttttt 381  Q
    ||||||||||||||||||||||||||| |||||    
T  28146332 attgggatttggaaggattttaaaagacttttt 28146300  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 30588862 - 30588926
Alignment:
Q  361 aaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaaga 425  Q
    ||||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| ||||||||    
T  30588862 aaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaaga 30588926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 5e-39; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 331 - 437
Target Start/End: Original strand, 31494232 - 31494338
Alignment:
Q  331 cttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattaga 430  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| || ||||||||||    
T  31494232 cttaggagggtgtattggattgggatttggaaggattttaaaagactttttggttatagaaaaatcttgaggtattcaatcaagattttaaaagattaga 31494331  T
Q  431 aataatt 437  Q
    |||||||    
T  31494332 aataatt 31494338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 341 - 437
Target Start/End: Original strand, 47031248 - 47031344
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaataatt 437  Q
    ||||||| |||||||||| |||||||||||||| | |||||||| |||||||||||||||  |||||||||||||| || ||| |||| ||||||||    
T  47031248 tgtattgaattgggattttgaaggattttaaaaaactttttggttatagaaaaatcttgagatattcaatcaagattttaaaaaattataaataatt 47031344  T

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Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 336 - 431
Target Start/End: Complemental strand, 24939735 - 24939640
Alignment:
Q  336 gaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaa 431  Q
    |||| ||||||| ||||||| || ||| |||||||||||| |||||||| ||||||||||||||| ||||||||||| ||| || |||||||||||    
T  24939735 gagggtgtattgcattgggagttcgaaagattttaaaagactttttggttatagaaaaatcttgaggtattcaatcatgattttaaaagattagaa 24939640  T

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Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 362 - 437
Target Start/End: Complemental strand, 36355543 - 36355468
Alignment:
Q  362 aggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaataatt 437  Q
    ||||||||||| ||||||||||| ||| ||||||| ||| ||||||||||||||| || |||||||||||||||||    
T  36355543 aggattttaaatgattttttggttataaaaaaatcgtgaggtattcaatcaagattttaaaagattagaaataatt 36355468  T

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Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 438
Target Start/End: Original strand, 32630714 - 32630798
Alignment:
Q  354 gatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaataattt 438  Q
    ||||| ||||||||||||| || |||||| | ||| ||||||||||| ||||||||||||| | || ||||||||||||||||||    
T  32630714 gattttgaaggattttaaatgactttttgcttataaaaaaatcttgaggtattcaatcaagcttttaaaagattagaaataattt 32630798  T

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Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 438
Target Start/End: Complemental strand, 48545899 - 48545802
Alignment:
Q  342 gtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaa-tcttgaagtattcaatcaagatctttaaagattagaaataattt 438  Q
    |||||| |||| ||||| ||| |||||||||||||||||| ||  || ||||| |||||| ||||||||||||||| || || |||||||||||||||    
T  48545899 gtattgaattgagattttgaaagattttaaaagattttttagttctaaaaaaaatcttgaggtattcaatcaagattttaaaggattagaaataattt 48545802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 32630649 - 32630716
Alignment:
Q  349 attgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagat 416  Q
    |||| ||||| ||||||||||||| ||  ||||||| ||| ||||||||||| |||||||||||||||    
T  32630649 attgagattttgaaggattttaaatgacgttttggttataaaaaaatcttgaggtattcaatcaagat 32630716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 422
Target Start/End: Original strand, 151861 - 151942
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  ||||||||||||||| ||||| ||  || |||| |||||   |||||||||||||| |||||    
T  151861 tgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgatattcaatcaagatttttaa 151942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 27418723 - 27418642
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||| ||||||| |||||  ||||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  27418723 tgtactggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 27418642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 342 - 422
Target Start/End: Original strand, 30110807 - 30110887
Alignment:
Q  342 gtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    ||||||||||| |||||  ||| ||||||||||| ||||| ||  || |||| ||||| |||||||||| ||||| |||||    
T  30110807 gtattggattgagatttcaaagaattttaaaagacttttttgttttataaaagtcttgtagtattcaattaagatttttaa 30110887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 5e-33; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 341 - 437
Target Start/End: Original strand, 27090638 - 27090734
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaataatt 437  Q
    ||||||||||||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  27090638 tgtattggattgggatttccaaagattttaaaagattttttggttatagaaaaatcttgaagtattcaatcaagattttaaaagattagaaataatt 27090734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 332 - 438
Target Start/End: Original strand, 2372963 - 2373069
Alignment:
Q  332 ttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaa 431  Q
    |||||| | ||||||| |||||||||| |||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||| || |||||||||||    
T  2372963 ttaggatggtgtattgaattgggatttcgaaggattttaaaagacttttttgttatagaaaaatcttgaggtattcaatcaagattttaaaagattagaa 2373062  T
Q  432 ataattt 438  Q
    |||||||    
T  2373063 ataattt 2373069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 329 - 438
Target Start/End: Original strand, 30046113 - 30046222
Alignment:
Q  329 gacttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagatta 428  Q
    |||||||| |||||||||  |||| ||||| ||||||||||||| || |||||||| ||| ||||||||||| ||||||||||| ||| || ||| ||||    
T  30046113 gacttagggggttgtattaaattgagattttgaaggattttaaatgactttttggttataaaaaaatcttgaggtattcaatcatgattttaaaatatta 30046212  T
Q  429 gaaataattt 438  Q
    ||||||||||    
T  30046213 gaaataattt 30046222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 329 - 438
Target Start/End: Original strand, 30137157 - 30137266
Alignment:
Q  329 gacttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagatta 428  Q
    |||||||| |||||||||  |||| ||||| ||||||||||||| || |||||||| ||| ||||||||||| ||||||||||| ||| || ||| ||||    
T  30137157 gacttagggggttgtattaaattgagattttgaaggattttaaatgactttttggttataaaaaaatcttgaggtattcaatcatgattttaaaatatta 30137256  T
Q  429 gaaataattt 438  Q
    ||||||||||    
T  30137257 gaaataattt 30137266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 24936228 - 24936122
Alignment:
Q  332 ttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaa 431  Q
    ||||| |||||||||  |||| ||||| ||||||||||||| || |||||||| ||| |||||||||||  |||||||||| ||| || |||||||||||    
T  24936228 ttagggggttgtattcaattgagattttgaaggattttaaatgactttttggttataaaaaaatcttgagttattcaatcatgattttaaaagattagaa 24936129  T
Q  432 ataattt 438  Q
    |||||||    
T  24936128 ataattt 24936122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 25684912 - 25684806
Alignment:
Q  332 ttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaa 431  Q
    ||||| |||||||||  |||| ||||| ||||||||||||| || |||||||| ||| |||||||||||  |||||||||| ||| || |||||||||||    
T  25684912 ttagggggttgtattcaattgagattttgaaggattttaaatgactttttggttataaaaaaatcttgagttattcaatcatgattttaaaagattagaa 25684813  T
Q  432 ataattt 438  Q
    |||||||    
T  25684812 ataattt 25684806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 2485716 - 2485652
Alignment:
Q  349 attgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaa 413  Q
    |||||||||| |||| |||||||||||||||||||| |||||||||||||||  |||||||||||    
T  2485716 attgggatttcgaagaattttaaaagattttttggttatagaaaaatcttgagatattcaatcaa 2485652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 415
Target Start/End: Complemental strand, 18176559 - 18176476
Alignment:
Q  332 ttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaaga 415  Q
    |||||||| ||||||| |||  |||||| | |||||||||||||||||||  ||||| ||||||||||  ||||||||||||||    
T  18176559 ttaggagggtgtattgaattaagatttgaagggattttaaaagattttttaataataaaaaaatcttgtggtattcaatcaaga 18176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 422
Target Start/End: Original strand, 29940941 - 29941029
Alignment:
Q  334 aggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||| |||||||||||| |||||  ||||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  29940941 aggagggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 29941029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 437
Target Start/End: Complemental strand, 38823016 - 38822919
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttt-tggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaataatt 437  Q
    ||||||| ||||  |||| |||||||| ||||||| |||| | || ||| |||||||| || | ||||||||||||| || |||||||||||||||||    
T  38823016 tgtattgaattgaaattttgaaggattgtaaaagacttttatagttataaaaaaatctcgaggcattcaatcaagattttaaaagattagaaataatt 38822919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 334 - 438
Target Start/End: Original strand, 7857021 - 7857125
Alignment:
Q  334 aggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaat 433  Q
    |||||| |||||| ||||| ||||| |||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| || |||||||||||||    
T  7857021 aggagggtgtattagattgagatttagaaggattttaaaagactttttggttatagaaaaatcttgaggtattcaatcaagattttaaaagattagaaat 7857120  T
Q  434 aattt 438  Q
    |||||    
T  7857121 aattt 7857125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 9689394 - 9689337
Alignment:
Q  364 gattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatcttta 421  Q
    ||||||||||||||||||  | ||| ||||||||||| ||||||||||||||| ||||    
T  9689394 gattttaaaagattttttaattataaaaaaatcttgaggtattcaatcaagattttta 9689337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 381
Target Start/End: Complemental strand, 6902732 - 6902692
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagatttttt 381  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  6902732 tgtattggattgagatttggaaggattttaaaagacttttt 6902692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 422
Target Start/End: Original strand, 40410593 - 40410674
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  | ||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  40410593 tgtattggattgagatttcaatggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 40410674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 7e-29; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 332 - 437
Target Start/End: Original strand, 9191125 - 9191230
Alignment:
Q  332 ttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaa 431  Q
    |||||||| |||||||||||| |||||||||  ||||||||||| |||||||| |||||||||||||||  |||||||||||||| || |||||||||||    
T  9191125 ttaggagggtgtattggattgagatttggaaaaattttaaaagactttttggttatagaaaaatcttgagttattcaatcaagattttaaaagattagaa 9191224  T
Q  432 ataatt 437  Q
    ||||||    
T  9191225 ataatt 9191230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 415
Target Start/End: Complemental strand, 51826917 - 51826843
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaaga 415  Q
    ||||||| |||  |||||| | ||||||||||||| |||||  ||||| ||||||||||  ||||||||||||||    
T  51826917 tgtattgaattaagatttgaagggattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaaga 51826843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 26882907 - 26882826
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  ||||||||||||||| ||||| ||  || |||| |||||   |||||||||||||| |||||    
T  26882907 tgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgttattcaatcaagatttttaa 26882826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 413
Target Start/End: Original strand, 27198265 - 27198346
Alignment:
Q  332 ttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaa 413  Q
    |||||||| |||||||||||| || ||  | ||||||||||||| |||||| | ||| |||| |||||  ||||||||||||    
T  27198265 ttaggagggtgtattggattgagactttaagggattttaaaagactttttgtttataaaaaagtcttgtggtattcaatcaa 27198346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 422
Target Start/End: Original strand, 45318463 - 45318544
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  ||||||||||||||| ||||| ||  || |||| ||||   ||||||||||||||| |||||    
T  45318463 tgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttctggtattcaatcaagatttttaa 45318544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 422
Target Start/End: Original strand, 52705389 - 52705477
Alignment:
Q  334 aggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||| ||||||  |||| |||||  || |||||||||||||||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  52705389 aggagggtgtattcaattgagatttcaaaagattttaaaagatttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 52705477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 7e-26; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 354 - 434
Target Start/End: Complemental strand, 14724020 - 14723940
Alignment:
Q  354 gatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaata 434  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  14724020 gatttggaaggattttaaaagacttttttgttatagaaaaatcttgaagtattcaatcaagattttaaaagattagaaata 14723940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 12185655 - 12185574
Alignment:
Q  253 aacagttccaccaacaatgatttttcagcaaagtgtctatggaactctttccaatctggaagcagcagaagcaaaagactta 334  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||||||    
T  12185655 aacagttccaccagcaatgaattttcagcaaagtgtctatggaactcttcccaatctggaaacagcagaaacagaagactta 12185574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 12430083 - 12430002
Alignment:
Q  253 aacagttccaccaacaatgatttttcagcaaagtgtctatggaactctttccaatctggaagcagcagaagcaaaagactta 334  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||||||    
T  12430083 aacagttccaccagcaatgaattttcagcaaagtgtctatggaactcttcccaatctggaaacagcagaaacagaagactta 12430002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 334 - 435
Target Start/End: Complemental strand, 24296740 - 24296639
Alignment:
Q  334 aggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaat 433  Q
    |||||| ||||||| |||||||||| ||| |||||||||||| |||||||| ||||||||||||||| ||||||||||| ||| || |||||||| ||||    
T  24296740 aggagggtgtattgaattgggatttcgaaagattttaaaagactttttggttatagaaaaatcttgaggtattcaatcatgattttaaaagattataaat 24296641  T
Q  434 aa 435  Q
    ||    
T  24296640 aa 24296639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 12174143 - 12174065
Alignment:
Q  253 aacagttccaccaacaatgatttttcagcaaagtgtctatggaactctttccaatctggaagcagcagaagcaaaagactta 334  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||   ||||||||||||||| |||| |||||||||||    
T  12174143 aacagttccaccagcaatgaattttcagcaaagtgtctatggaactc---ccaatctggaagcagtagaaacaaaagactta 12174065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 12418571 - 12418493
Alignment:
Q  253 aacagttccaccaacaatgatttttcagcaaagtgtctatggaactctttccaatctggaagcagcagaagcaaaagactta 334  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||   ||||||||||||||| |||| |||||||||||    
T  12418571 aacagttccaccagcaatgaattttcagcaaagtgtctatggaactc---ccaatctggaagcagtagaaacaaaagactta 12418493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 422
Target Start/End: Original strand, 2112786 - 2112875
Alignment:
Q  333 taggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    ||||||| |||||||||||| |||||  ||||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  2112786 taggagggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 2112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 341 - 422
Target Start/End: Original strand, 42274975 - 42275056
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  ||||||||||||||||||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  42274975 tgtattggattgagatttcaaaggattttaaaagatttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 42275056  T

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Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 38806952 - 38806866
Alignment:
Q  349 attgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaataa 435  Q
    |||||||||| ||  ||||||| |||| ||||  || ||| ||||||||||| ||||||||||||||| || | |||||||||||||    
T  38806952 attgggattttgatagattttagaagacttttaagttataaaaaaatcttgaggtattcaatcaagattttaacagattagaaataa 38806866  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 1606094 - 1606013
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  ||||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  1606094 tgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 1606013  T

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Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 29260357 - 29260276
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  ||||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  29260357 tgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 29260276  T

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Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 422
Target Start/End: Complemental strand, 43605444 - 43605364
Alignment:
Q  342 gtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    ||||||||||| |||||  ||||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  43605444 gtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 43605364  T

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Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 438
Target Start/End: Original strand, 23185725 - 23185797
Alignment:
Q  366 ttttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaataattt 438  Q
    |||||||||| |||||  | ||| |||||||| || ||||||||||||||| || | | ||||||||||||||    
T  23185725 ttttaaaagactttttacttataaaaaaatctcgaggtattcaatcaagattttaatatattagaaataattt 23185797  T

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Target: chr6 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 332 - 438
Target Start/End: Original strand, 35164798 - 35164904
Alignment:
Q  332 ttaggaggttgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaa 431  Q
    ||||| |||||||||  |||| ||||| ||||||||||||| || |||||||| ||| |||||||||||  |||||||||| ||| || |||||||||||    
T  35164798 ttagggggttgtattcaattgagattttgaaggattttaaatgactttttggttataaaaaaatcttgagttattcaatcatgattttaaaagattagaa 35164897  T
Q  432 ataattt 438  Q
    |||||||    
T  35164898 ataattt 35164904  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000006; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 354 - 437
Target Start/End: Original strand, 5116977 - 5117060
Alignment:
Q  354 gatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaaagattagaaataatt 437  Q
    ||||||||| ||||||||||||  ||||  | ||| ||||||||| | ||||||||||||||| || | |||||||||||||||    
T  5116977 gatttggaaagattttaaaagaccttttaattataaaaaaatcttaaggtattcaatcaagattttaagagattagaaataatt 5117060  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 8584086 - 8584005
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  ||||||||||||||| |||||  |  || |||| |||||  ||||||||||||||| |||||    
T  8584086 tgtattggattgagatttcaaaggattttaaaagacttttttattttataaaagtcttgtggtattcaatcaagatttttaa 8584005  T

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Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 413
Target Start/End: Complemental strand, 28847183 - 28847111
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaa 413  Q
    |||||||||||| |||||  ||||||||||||||| |||||  ||||| |||| ||| |  ||||||||||||    
T  28847183 tgtattggattgagattttaaaggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaa 28847111  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 81863 - 81782
Alignment:
Q  341 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatctttaa 422  Q
    |||||||||||| |||||  ||||||||||||||| ||||| ||  || |||| |||||  ||||||||||||||| |||||    
T  81863 tgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 81782  T

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