View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19009_low_53 (Length: 316)
Name: NF19009_low_53
Description: NF19009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19009_low_53 |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 79 - 297
Target Start/End: Original strand, 36268832 - 36269051
Alignment:
| Q |
79 |
gttgacatgtaaattgttcaaatatgattggtcaaataacatacctataaaa-attaatgagccatgcatagtctaaagtaaaactataatcctatttac |
177 |
Q |
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| T |
36268832 |
gttgacatgtaaattgttcaaatatgattggtcaaataacaaacctataaaaaattaatgagccatgcatagtctaaagtaaaactatactcctatttac |
36268931 |
T |
|
| Q |
178 |
tttgtcataaagccagtactcctatttgctactagaaatgaaaaatgaaatttgtcactgattctcgttactcctatttattacccaattttgccggtga |
277 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
36268932 |
tttgtcataaaaacagtactcctatttgctactagaaatgaaaaatgaaatttgtcactgattctcgttactcctatttattacccaattttgctggtga |
36269031 |
T |
|
| Q |
278 |
cgtggatagtttgggaaacg |
297 |
Q |
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|||||||||||||||||||| |
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| T |
36269032 |
cgtggatagtttgggaaacg |
36269051 |
T |
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