View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19009_low_55 (Length: 315)

Name: NF19009_low_55
Description: NF19009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19009_low_55
NF19009_low_55
[»] chr6 (12 HSPs)
chr6 (24-303)||(18253338-18253626)
chr6 (23-79)||(24623315-24623372)
chr6 (21-64)||(8569731-8569774)
chr6 (21-64)||(26356077-26356120)
chr6 (21-79)||(32053794-32053853)
chr6 (21-79)||(33824887-33824946)
chr6 (26-64)||(8629697-8629735)
chr6 (23-64)||(788888-788929)
chr6 (23-79)||(866283-866340)
chr6 (23-79)||(20744144-20744201)
chr6 (25-80)||(14441455-14441511)
chr6 (24-64)||(32524419-32524459)
[»] chr4 (29 HSPs)
chr4 (21-79)||(23809955-23810014)
chr4 (24-79)||(28435247-28435303)
chr4 (25-79)||(22040656-22040711)
chr4 (25-79)||(39171370-39171425)
chr4 (23-61)||(30850382-30850420)
chr4 (26-79)||(50362140-50362194)
chr4 (23-79)||(11949761-11949818)
chr4 (23-64)||(25115071-25115112)
chr4 (24-79)||(20383494-20383550)
chr4 (21-79)||(7230286-7230345)
chr4 (21-64)||(10148201-10148244)
chr4 (21-64)||(19588176-19588219)
chr4 (25-79)||(20799394-20799449)
chr4 (40-79)||(25978324-25978363)
chr4 (21-79)||(37921752-37921811)
chr4 (21-79)||(56551588-56551647)
chr4 (26-79)||(12322679-12322733)
chr4 (21-63)||(49041977-49042019)
chr4 (21-59)||(50152234-50152272)
chr4 (30-64)||(55421574-55421608)
chr4 (23-79)||(9946433-9946490)
chr4 (23-64)||(21318251-21318292)
chr4 (23-64)||(39093573-39093614)
chr4 (23-79)||(43374270-43374327)
chr4 (24-64)||(675940-675980)
chr4 (27-78)||(22411771-22411823)
chr4 (24-64)||(23775540-23775580)
chr4 (24-64)||(38453287-38453327)
chr4 (27-63)||(41520977-41521013)
[»] chr2 (24 HSPs)
chr2 (23-64)||(11560520-11560561)
chr2 (22-79)||(20120718-20120776)
chr2 (23-64)||(660820-660861)
chr2 (21-62)||(20200729-20200770)
chr2 (25-62)||(38904085-38904122)
chr2 (24-79)||(20565074-20565130)
chr2 (23-63)||(20990902-20990942)
chr2 (24-79)||(25186241-25186297)
chr2 (21-79)||(10735827-10735886)
chr2 (23-62)||(23250318-23250357)
chr2 (21-79)||(24592842-24592901)
chr2 (25-79)||(25598562-25598617)
chr2 (21-64)||(29544649-29544692)
chr2 (21-64)||(42791317-42791360)
chr2 (21-63)||(44694711-44694753)
chr2 (23-79)||(3197078-3197134)
chr2 (23-60)||(5168577-5168614)
chr2 (23-79)||(8781648-8781705)
chr2 (23-64)||(9547407-9547448)
chr2 (23-64)||(18693660-18693701)
chr2 (27-64)||(24579670-24579707)
chr2 (23-79)||(27244663-27244720)
chr2 (23-79)||(29734697-29734754)
chr2 (23-64)||(31815885-31815926)
[»] chr7 (18 HSPs)
chr7 (24-79)||(3830074-3830130)
chr7 (21-78)||(27462432-27462490)
chr7 (23-79)||(18714454-18714511)
chr7 (25-79)||(10244733-10244788)
chr7 (21-79)||(19416520-19416579)
chr7 (21-64)||(38374187-38374230)
chr7 (22-64)||(6781829-6781871)
chr7 (27-69)||(18023696-18023738)
chr7 (26-79)||(39926539-39926593)
chr7 (22-79)||(46987092-46987150)
chr7 (22-64)||(47155101-47155143)
chr7 (26-79)||(4047792-4047845)
chr7 (23-60)||(10242506-10242543)
chr7 (23-64)||(19599167-19599208)
chr7 (22-63)||(20455159-20455200)
chr7 (23-78)||(27833399-27833455)
chr7 (40-79)||(33610940-33610980)
chr7 (31-63)||(46909814-46909846)
[»] chr8 (17 HSPs)
chr8 (21-79)||(8717471-8717530)
chr8 (21-64)||(8881297-8881340)
chr8 (21-64)||(12748923-12748966)
chr8 (21-79)||(27587227-27587286)
chr8 (21-64)||(32051528-32051571)
chr8 (21-64)||(37141379-37141422)
chr8 (22-64)||(35198534-35198576)
chr8 (21-62)||(6471535-6471576)
chr8 (23-64)||(7869639-7869680)
chr8 (23-79)||(19163534-19163591)
chr8 (23-64)||(23159463-23159504)
chr8 (23-64)||(32192916-32192957)
chr8 (19-64)||(33482143-33482188)
chr8 (23-63)||(3672614-3672654)
chr8 (28-64)||(12714373-12714409)
chr8 (24-64)||(20275188-20275228)
chr8 (24-64)||(21061815-21061855)
[»] chr3 (31 HSPs)
chr3 (21-79)||(29631192-29631251)
chr3 (21-79)||(52119382-52119441)
chr3 (22-63)||(16792971-16793012)
chr3 (23-79)||(16980352-16980409)
chr3 (22-75)||(28965774-28965827)
chr3 (23-64)||(30554873-30554914)
chr3 (23-79)||(34899103-34899160)
chr3 (22-62)||(7202913-7202953)
chr3 (28-79)||(10926475-10926527)
chr3 (24-64)||(39779046-39779086)
chr3 (21-64)||(759590-759633)
chr3 (21-79)||(25340920-25340979)
chr3 (21-79)||(25441496-25441555)
chr3 (21-64)||(38130955-38130998)
chr3 (21-60)||(38602984-38603023)
chr3 (25-79)||(45431954-45432009)
chr3 (21-64)||(48796214-48796257)
chr3 (21-64)||(51882196-51882239)
chr3 (26-64)||(10594699-10594737)
chr3 (18-64)||(46903930-46903976)
chr3 (21-63)||(48849759-48849801)
chr3 (22-79)||(54230096-54230154)
chr3 (21-62)||(20612273-20612314)
chr3 (31-79)||(21331423-21331472)
chr3 (23-79)||(21549044-21549101)
chr3 (23-79)||(23147976-23148033)
chr3 (23-79)||(48209209-48209266)
chr3 (27-79)||(50037317-50037370)
chr3 (23-79)||(25727965-25728021)
chr3 (24-64)||(27065731-27065771)
chr3 (28-64)||(54018409-54018445)
[»] chr1 (18 HSPs)
chr1 (22-64)||(5907821-5907863)
chr1 (23-64)||(27533265-27533306)
chr1 (25-79)||(17283957-17284012)
chr1 (21-64)||(25532995-25533038)
chr1 (25-64)||(27449445-27449484)
chr1 (21-79)||(34521186-34521245)
chr1 (21-79)||(45140002-45140061)
chr1 (21-79)||(50638912-50638971)
chr1 (22-60)||(35473978-35474016)
chr1 (23-79)||(8269366-8269423)
chr1 (23-79)||(17139515-17139572)
chr1 (23-64)||(35011415-35011456)
chr1 (36-79)||(8253745-8253789)
chr1 (24-64)||(9929230-9929270)
chr1 (23-63)||(13401620-13401660)
chr1 (24-79)||(26803450-26803506)
chr1 (40-79)||(31890764-31890804)
chr1 (28-79)||(44678020-44678072)
[»] chr5 (16 HSPs)
chr5 (23-79)||(15889417-15889474)
chr5 (23-64)||(16076453-16076494)
chr5 (28-79)||(17861985-17862037)
chr5 (21-79)||(6489013-6489072)
chr5 (21-64)||(22522797-22522840)
chr5 (21-64)||(40715945-40715988)
chr5 (25-79)||(26166746-26166800)
chr5 (22-64)||(41630109-41630151)
chr5 (31-79)||(11844444-11844493)
chr5 (31-79)||(13409434-13409483)
chr5 (21-62)||(14474858-14474899)
chr5 (23-79)||(34436857-34436914)
chr5 (23-60)||(37021370-37021407)
chr5 (31-64)||(43108591-43108624)
chr5 (24-79)||(18789042-18789098)
chr5 (23-63)||(40959025-40959065)
[»] scaffold0143 (1 HSPs)
scaffold0143 (19-64)||(4488-4533)
[»] scaffold0028 (1 HSPs)
scaffold0028 (27-64)||(72777-72814)
[»] scaffold0021 (1 HSPs)
scaffold0021 (23-64)||(161163-161204)
[»] scaffold0238 (1 HSPs)
scaffold0238 (24-64)||(25411-25451)


Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 24 - 303
Target Start/End: Original strand, 18253338 - 18253626
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtccgtacaactgagctaacttgtattaaaaagcaagattttttccccacttataatctacat 123  Q
    ||||||||||||||| |||| |||||||||||||||||| | | ||| ||||||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  18253338 ggggtttgaaccctggaccttgcatatattatgcattgttcatgcaagtgagctaacttatatgaaaaagcacgattttttccccacttataatctacat 18253437  T
Q  124 ttcaatataacacaaaagcaaa--------ccaggatactatatgtacgactcatggtcactgataagtgggaaaacgctcgagcatagcgagatgagtg 215  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18253438 ttcaatataacacaaaagcaaaaaatgaaaccaggatactatatgtacgactcatggtcactgataagtgggaaaacgctctagcatagcgagatgagtg 18253537  T
Q  216 tttaataaaaaa-ctacattattgtcaacaacctctatcgtccaagacgtagacacaattggttgaattgtgatcaatcgtttgcattc 303  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18253538 tttaataaaaaatctacattattgtcagcaacctctatcgtccaagacgtagacacaattggttgaattgtgatcgatcgtttgcattc 18253626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 24623315 - 24623372
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||| ||||||  ||||||||||||||||||| || ||||||||||||    
T  24623315 cggggtttgaaccccgaaccttacatatattatgcattgtccatatcaactgagctaa 24623372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 8569774 - 8569731
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| | |||| ||||||||||||||||||||    
T  8569774 gccggggtttgaaccccggaccttgcatatattatgcattgtcc 8569731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 26356077 - 26356120
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||    
T  26356077 gccggagtttgaaccccgaaccttgcatatattatgcattgtcc 26356120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 32053853 - 32053794
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||| |||||||||  |||||| |||||||||||||||||||| || ||||||||||||    
T  32053853 gccggagtttgaaccacgaaccttgcatatattatgcattgtccataccaactgagctaa 32053794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 33824946 - 33824887
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||| ||||||||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  33824946 gccgaggtttgaaccccggaccttgcatatattatgcattgtccttatcaactgagctaa 33824887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 8629697 - 8629735
Alignment:
Q  26 ggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  8629697 ggtttgaaccccgaaccttgcatatattatgcattgtcc 8629735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 788929 - 788888
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||| | |||||| ||||||||||||||||||||    
T  788929 cggggtttgaactccgaaccttgcatatattatgcattgtcc 788888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 866283 - 866340
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||| ||||||| ||||||||||||||| || | || ||||||||||||    
T  866283 cggggtttgaaccatgaaccttgcatatattatgcatcgtgcctaccaactgagctaa 866340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 20744201 - 20744144
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||||   |||| |||||||||||||||||||| || ||||||||||||    
T  20744201 cggggtttgaaccccagaccttgcatatattatgcattgtccataccaactgagctaa 20744144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 14441455 - 14441511
Alignment:
Q  25 gggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaac 80  Q
    ||||||||| || |||||| ||||| |||||||||||||| || |||||||||||||    
T  14441455 gggtttgaagcccgaaccttgcatacattatgcattgtccttaccaactgagctaac 14441511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 32524419 - 32524459
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||||| || | ||||||||||||||||||||    
T  32524419 ggggtttgaaccctggactttgcatatattatgcattgtcc 32524459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 23810014 - 23809955
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||    
T  23810014 gccggggtttgaaccctgaaccttgcatatattatgctttgtccataccaactgagctaa 23809955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 28435247 - 28435303
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||| |||||| |||||||||||||||||||| || ||||||||||||    
T  28435247 ggggtttgaaccccgaaccttgcatatattatgcattgtccataccaactgagctaa 28435303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 22040711 - 22040656
Alignment:
Q  25 gggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||| |||||| |||||||||||||||||||| || ||||||||||||    
T  22040711 gggtttgaaccccgaaccttgcatatattatgcattgtccatatcaactgagctaa 22040656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 39171370 - 39171425
Alignment:
Q  25 gggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||||||||| |||||| ||||||||||||| || ||||||||||||    
T  39171370 gggtttgaaccctgaaccttgcatattttatgcattgtccatatcaactgagctaa 39171425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 30850382 - 30850420
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattg 61  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  30850382 cggggtttgaaccctgaaccttgcatatattatgcattg 30850420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 50362140 - 50362194
Alignment:
Q  26 ggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||| |||| |||||||||||||||||||| || ||||||||||||    
T  50362140 ggtttgaaccctggaccttgcatatattatgcattgtccctaccaactgagctaa 50362194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 11949761 - 11949818
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  11949761 cggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 11949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 25115112 - 25115071
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  25115112 cggggtttgaaccctgaaccttgcatatgttatgcattgtcc 25115071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 20383550 - 20383494
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  20383550 ggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 20383494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 7230345 - 7230286
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||| ||||||||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  7230345 gccgaggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 7230286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 10148244 - 10148201
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||    
T  10148244 gccgaggtttgaactctgaaccttgcatatattatgcattgtcc 10148201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 19588219 - 19588176
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||||| |||| |||||| |||||||||||||    
T  19588219 gccggggtttgaaccctggaccttgcatattttatgcattgtcc 19588176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 20799394 - 20799449
Alignment:
Q  25 gggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  20799394 gggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 20799449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 25978363 - 25978324
Alignment:
Q  40 acctcgcatatattatgcattgtccgtacaactgagctaa 79  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  25978363 accttgcatatattatgcattgtccttacaactgagctaa 25978324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 37921811 - 37921752
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgtac-aactgagctaa 79  Q
    ||||||||||||| || | |||| |||||||||||||||||||| ||| |||||||||||    
T  37921811 gccggggtttgaatcccggaccttgcatatattatgcattgtccttactaactgagctaa 37921752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 56551588 - 56551647
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||||  | |||| |||||||||||||||||||| || ||||||||||||    
T  56551588 gccggggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgagctaa 56551647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 12322733 - 12322679
Alignment:
Q  26 ggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||| | | || ||||||||||||||||||||||| ||||||||||||    
T  12322733 ggtttgaaccccggaacttgcatatattatgcattgtccgtaccaactgagctaa 12322679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 49041977 - 49042019
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtc 63  Q
    |||||||||||||||| | |||| |||||||||||||||||||    
T  49041977 gccggggtttgaaccccggaccttgcatatattatgcattgtc 49042019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 50152234 - 50152272
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcat 59  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  50152234 gccggggtttgaaccccgaaccttgcatatattatgcat 50152272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 55421574 - 55421608
Alignment:
Q  30 tgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||| ||||||||||||||||||||    
T  55421574 tgaaccctgaaccttgcatatattatgcattgtcc 55421608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 9946490 - 9946433
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||| | |||| |||||| ||||||||||||| || ||||||||||||    
T  9946490 cggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 9946433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 21318251 - 21318292
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||  |||| ||||||||||||||||||||    
T  21318251 cggggtttgaaccctagaccttgcatatattatgcattgtcc 21318292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 39093573 - 39093614
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||||| ||| | ||||||||||||||||||||    
T  39093573 cggggtttgaaccctaaactttgcatatattatgcattgtcc 39093614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 43374270 - 43374327
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||| | |||||| |||||| ||||||||||||| || ||||||||||||    
T  43374270 cggggtttgaactccgaaccttgcatattttatgcattgtccatatcaactgagctaa 43374327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 675980 - 675940
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||| | |||| ||||||||||||||||||||    
T  675980 ggggtttgaaccccggaccttgcatatattatgcattgtcc 675940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 22411823 - 22411771
Alignment:
Q  27 gtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagcta 78  Q
    |||||||||| ||||||  ||||||||||||||||||| || |||||||||||    
T  22411823 gtttgaaccccgaaccttacatatattatgcattgtccataccaactgagcta 22411771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 23775580 - 23775540
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||| |||||||| |||| ||||||||||||||||||||    
T  23775580 ggggttcgaaccctggaccttgcatatattatgcattgtcc 23775540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 38453327 - 38453287
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||| |||||||| |||| ||||||||||||||||||||    
T  38453327 ggggttcgaaccctggaccttgcatatattatgcattgtcc 38453287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 41521013 - 41520977
Alignment:
Q  27 gtttgaaccctgaacctcgcatatattatgcattgtc 63  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  41521013 gtttgaaccttgaaccttgcatatattatgcattgtc 41520977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 11560561 - 11560520
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  11560561 cggggtttgaaccctgaaccttgcatatattatgcattgtcc 11560520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 20120718 - 20120776
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||| ||||||||| |||||| |||||||||||||||||||| || ||||||||||||    
T  20120718 ccgggatttgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaa 20120776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 660820 - 660861
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  660820 cggggtttgaaccctggaccttgcatatattatgcattgtcc 660861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 20200770 - 20200729
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgt 62  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  20200770 gccggggtttgaaccctggaccttgcatatattatgcattgt 20200729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 38904122 - 38904085
Alignment:
Q  25 gggtttgaaccctgaacctcgcatatattatgcattgt 62  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  38904122 gggtttgaaccctgaaccttgcatatattatgcattgt 38904085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 20565074 - 20565130
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  20565074 ggggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 20565130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 20990902 - 20990942
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtc 63  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  20990902 cggggtttgaaccctgaaccttgcatattttatgcattgtc 20990942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 25186241 - 25186297
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  25186241 ggggtttgaaccccggaccttgcatatattatgcattgtccatatcaactgagctaa 25186297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 10735827 - 10735886
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||||| | |||| ||||||||||||||| |||| || ||||||||||||    
T  10735827 gccggggtttgaaccccggaccttgcatatattatgcatcgtccctaccaactgagctaa 10735886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 23250318 - 23250357
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgt 62  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  23250318 cggggtttgaaccctggaccttgcatatattatgcattgt 23250357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 24592842 - 24592901
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||||||   |||| |||||||||||||||||||| || ||||||||||||    
T  24592842 gccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaa 24592901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 25598562 - 25598617
Alignment:
Q  25 gggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||| |||||||| |||| |||||||||||||||||||| || ||||||||||||    
T  25598562 gggttcgaaccctggaccttgcatatattatgcattgtccataccaactgagctaa 25598617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 29544692 - 29544649
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| | |||| ||||||||||||||||||||    
T  29544692 gccggggtttgaaccccggaccttgcatatattatgcattgtcc 29544649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 42791360 - 42791317
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| | |||| ||||||||||||||||||||    
T  42791360 gccggggtttgaaccccggaccttgcatatattatgcattgtcc 42791317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 44694753 - 44694711
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtc 63  Q
    |||||||||||||||| || ||| |||||||||||||||||||    
T  44694753 gccggggtttgaaccccgagccttgcatatattatgcattgtc 44694711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 3197078 - 3197134
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||| || |||||| |||||||||||||||||||| || ||||||||||||    
T  3197078 cggggtttgaatcc-gaaccttgcatatattatgcattgtccctaccaactgagctaa 3197134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 5168577 - 5168614
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcatt 60  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  5168577 cggggtttgaaccccgaaccttgcatatattatgcatt 5168614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 8781648 - 8781705
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||| | |||| ||||| |||||||||||||| || ||||||||||||    
T  8781648 cggggtttgaaccccggaccttgcatacattatgcattgtccataccaactgagctaa 8781705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 9547407 - 9547448
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||||  ||||| ||||||||||||||||||||    
T  9547407 cggggtttgaaccccaaaccttgcatatattatgcattgtcc 9547448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 18693660 - 18693701
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| | || ||||||||||||||||||||    
T  18693660 cggggtttgaaccctggatcttgcatatattatgcattgtcc 18693701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 24579670 - 24579707
Alignment:
Q  27 gtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  24579670 gtttgaaccctggaccttgcatatattatgcattgtcc 24579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 27244720 - 27244663
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||| ||||||||||  |||| |||||||||||||||||||| || ||||||||||||    
T  27244720 cgggctttgaaccctagaccttgcatatattatgcattgtccctatcaactgagctaa 27244663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 29734754 - 29734697
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||  | |||| |||||||||||||||||||| || ||||||||||||    
T  29734754 cggggtttgaaccacggaccttgcatatattatgcattgtccatatcaactgagctaa 29734697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 31815885 - 31815926
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||| | |||| ||||||||||||||||||||    
T  31815885 cggggtttgaaccccggaccttgcatatattatgcattgtcc 31815926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 3830130 - 3830074
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtccgtac-aactgagctaa 79  Q
    ||||||||||||||| |||| |||||||||||||||||||| ||| |||||||||||    
T  3830130 ggggtttgaaccctggaccttgcatatattatgcattgtccctacaaactgagctaa 3830074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 27462432 - 27462490
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagcta 78  Q
    |||||||||||||||| | |||| |||||||||||||||||||| || |||||||||||    
T  27462432 gccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagcta 27462490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 18714511 - 18714454
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  18714511 cggggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 18714454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 10244788 - 10244733
Alignment:
Q  25 gggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  10244788 gggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 10244733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 19416579 - 19416520
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||||| | |||| |||||| ||||||||||||| || ||||||||||||    
T  19416579 gccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 19416520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 38374187 - 38374230
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||    
T  38374187 gccggggtttgaaccctggaccttgcatatactatgcattgtcc 38374230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 6781871 - 6781829
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||||||| |||| |||||| |||||||||||||    
T  6781871 ccggggtttgaaccctggaccttgcatattttatgcattgtcc 6781829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 18023738 - 18023696
Alignment:
Q  27 gtttgaaccctgaacctcgcatatattatgcattgtccgtaca 69  Q
    |||||||||||| |||| |||||||||||||||||||| ||||    
T  18023738 gtttgaaccctggaccttgcatatattatgcattgtccctaca 18023696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 39926539 - 39926593
Alignment:
Q  26 ggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||| |||| | |||||||||||||||||||| || ||||||||||||    
T  39926539 ggtttgaaccccgaacattgcatatattatgcattgtccttatcaactgagctaa 39926593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 46987150 - 46987092
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||| |||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  46987150 ccggggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 46987092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 47155101 - 47155143
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||| |||||||| |||| ||||||||||||||||||||    
T  47155101 ccggggttcgaaccctggaccttgcatatattatgcattgtcc 47155143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 4047845 - 4047792
Alignment:
Q  26 ggtttgaaccctgaacctcgcatatattatgcattgtccgtacaactgagctaa 79  Q
    ||||| |||||||||||| |||||||||||||||| |||   ||||||||||||    
T  4047845 ggtttaaaccctgaaccttgcatatattatgcattatcctatcaactgagctaa 4047792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 10242543 - 10242506
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcatt 60  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  10242543 cggggtttgaaccctggaccttgcatatattatgcatt 10242506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 19599208 - 19599167
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||| | |||| ||||||||||||||||||||    
T  19599208 cggggtttgaaccccggaccttgcatatattatgcattgtcc 19599167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 20455200 - 20455159
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgtc 63  Q
    |||||||||||| ||||||||| | |||||||||||||||||    
T  20455200 ccggggtttgaatcctgaaccttgaatatattatgcattgtc 20455159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 27833399 - 27833455
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagcta 78  Q
    |||||||||||||| | ||||  ||||||||||||||||||| || |||||||||||    
T  27833399 cggggtttgaaccccggaccttacatatattatgcattgtccttaccaactgagcta 27833455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 33610940 - 33610980
Alignment:
Q  40 acctcgcatatattatgcattgtccgt-acaactgagctaa 79  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  33610940 accttgcatatattatgcattgtccgtaacaactgagctaa 33610980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 46909814 - 46909846
Alignment:
Q  31 gaaccctgaacctcgcatatattatgcattgtc 63  Q
    ||||||||||||||| |||||||||||||||||    
T  46909814 gaaccctgaacctcgtatatattatgcattgtc 46909846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 8717471 - 8717530
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| || ||||||||||||    
T  8717471 gccgaggtttgaaccccgaaccttgcatatattatgcattgtccataccaactgagctaa 8717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 8881340 - 8881297
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||||| |||| ||||||||||||||||||||    
T  8881340 gccggggtttgaaccctggaccttgcatatattatgcattgtcc 8881297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 12748966 - 12748923
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| | |||| ||||||||||||||||||||    
T  12748966 gccggggtttgaaccccggaccttgcatatattatgcattgtcc 12748923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 27587286 - 27587227
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||||| | |||| |||||||| ||||||||||| || ||||||||||||    
T  27587286 gccggggtttgaaccccggaccttgcatatatcatgcattgtccttaccaactgagctaa 27587227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 32051528 - 32051571
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| | |||| ||||||||||||||||||||    
T  32051528 gccggggtttgaaccccggaccttgcatatattatgcattgtcc 32051571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 37141422 - 37141379
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||    
T  37141422 gccggagtttgaaccccgaaccttgcatatattatgcattgtcc 37141379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 35198534 - 35198576
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||| |||| |||||||| ||||||||||||||||||||    
T  35198534 ccggggttcgaactctgaaccttgcatatattatgcattgtcc 35198576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 6471576 - 6471535
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgt 62  Q
    |||||||||||||||| |||| | ||||||||||||||||||    
T  6471576 gccggggtttgaaccccgaacattgcatatattatgcattgt 6471535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 7869639 - 7869680
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||||  ||||| ||||||||||||||||||||    
T  7869639 cggggtttgaacccccaaccttgcatatattatgcattgtcc 7869680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 19163534 - 19163591
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||| | |||| ||||| |||||||||||||| || ||||||||||||    
T  19163534 cggggtttgaaccccggaccttgcataaattatgcattgtccataccaactgagctaa 19163591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 23159504 - 23159463
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  23159504 cggggtttgaaccccgaatcttgcatatattatgcattgtcc 23159463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 32192957 - 32192916
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||| |||||| |||||| ||||||||||||||||||||    
T  32192957 cggggttcgaaccccgaaccttgcatatattatgcattgtcc 32192916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 33482143 - 33482188
Alignment:
Q  19 ttgccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||| ||||||||||| |||| ||||| ||||||||||||||    
T  33482143 ttgccgggatttgaaccctggaccttgcataaattatgcattgtcc 33482188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 3672614 - 3672654
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtc 63  Q
    ||||||||||||||| ||||| |||||| ||||||||||||    
T  3672614 cggggtttgaaccctaaaccttgcatattttatgcattgtc 3672654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 12714373 - 12714409
Alignment:
Q  28 tttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  12714373 tttgaaccccgaaccttgcatatattatgcattgtcc 12714409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 20275188 - 20275228
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  20275188 ggggtttgaaccccgaaccttgcatgtattatgcattgtcc 20275228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 21061815 - 21061855
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  21061815 ggggtttgaaccccgaaccttgcatgtattatgcattgtcc 21061855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 29631251 - 29631192
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||| || |||||| |||||||||||||||||||| || ||||||||||||    
T  29631251 gccggggtttgaatcccgaaccttgcatatattatgcattgtccataccaactgagctaa 29631192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 52119441 - 52119382
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||| |||||| |||||| |||||||||||||||||||| || ||||||||||||    
T  52119441 gccggggttcgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaa 52119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 16792971 - 16793012
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgtc 63  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  16792971 ccggggtttgaaccctggaccttgcatatattatgcattgtc 16793012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 16980352 - 16980409
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||| |||||||| ||||||| |||||||||||||||||||| || ||||||||||||    
T  16980352 cgggatttgaaccatgaaccttgcatatattatgcattgtccttaccaactgagctaa 16980409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 28965774 - 28965827
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgtccgtacaactgag 75  Q
    ||||||||||||||| ||||||  ||||||||||||||||| | ||||||||||    
T  28965774 ccggggtttgaaccccgaaccttacatatattatgcattgttcatacaactgag 28965827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 30554873 - 30554914
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  30554873 cggggtttgaaccctgaaccttgcatatagtatgcattgtcc 30554914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 34899160 - 34899103
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgtac-aactgagctaa 79  Q
    |||||||||||||| | |||| |||||||||||||||||||| ||| |||||||||||    
T  34899160 cggggtttgaaccccggaccttgcatatattatgcattgtccctacgaactgagctaa 34899103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 7202913 - 7202953
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgt 62  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  7202913 ccggggtttgaaccctgaaccttgcatattttatgcattgt 7202953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 10926527 - 10926475
Alignment:
Q  28 tttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||| |||||| |||||||||||||||||||| || ||||||||||||    
T  10926527 tttgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaa 10926475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 39779086 - 39779046
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  39779086 ggggtttgaaccccgaaccttgcatatattatgcattgtcc 39779046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 759590 - 759633
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||| |||||||||||||||| | ||||||||||||||||||||    
T  759590 gccgaggtttgaaccctgaactttgcatatattatgcattgtcc 759633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 25340920 - 25340979
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||||| | |||| |||||| ||||||||||||| || ||||||||||||    
T  25340920 gccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 25340979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 25441496 - 25441555
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||||||   |||| |||||||||||||||||||| || ||||||||||||    
T  25441496 gccggggtttgaaccccagaccttgcatatattatgcattgtccataccaactgagctaa 25441555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 38130955 - 38130998
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| | |||| ||||||||||||||||||||    
T  38130955 gccggggtttgaaccccggaccttgcatatattatgcattgtcc 38130998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 38603023 - 38602984
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcatt 60  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  38603023 gccggggtttgaaccatgaaccttgcatatattatgcatt 38602984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 45432009 - 45431954
Alignment:
Q  25 gggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  45432009 gggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 45431954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 48796214 - 48796257
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| |||||| |||||| |||||||||||||    
T  48796214 gccggggtttgaaccccgaaccttgcatatcttatgcattgtcc 48796257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 51882196 - 51882239
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||||| | || ||||||||||||||||||||    
T  51882196 gccggggtttgaaccctggatcttgcatatattatgcattgtcc 51882239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 10594737 - 10594699
Alignment:
Q  26 ggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  10594737 ggtttgaaccctaaaccttgcatatattatgcattgtcc 10594699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 46903976 - 46903930
Alignment:
Q  18 gttgccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||| |||||||||||| ||||  |||||||||||||||||||    
T  46903976 gttgccggagtttgaaccctggaccttacatatattatgcattgtcc 46903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 48849759 - 48849801
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtc 63  Q
    |||||||||||||||| | |||| |||||||||||||||||||    
T  48849759 gccggggtttgaaccccggaccttgcatatattatgcattgtc 48849801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 54230096 - 54230154
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||| ||||||  ||||| |||||||||||||||||||| || ||||||||||||    
T  54230096 ccggggttcgaaccccaaaccttgcatatattatgcattgtccttaccaactgagctaa 54230154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 20612273 - 20612314
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgt 62  Q
    ||||||||||||||||  ||||| ||||||||||||||||||    
T  20612273 gccggggtttgaaccccaaaccttgcatatattatgcattgt 20612314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 21331423 - 21331472
Alignment:
Q  31 gaaccctgaacctcgcatatattatgcattgtccgt-acaactgagctaa 79  Q
    |||||| |||||| |||||||||||||||||||| | |||||||||||||    
T  21331423 gaaccccgaaccttgcatatattatgcattgtccataacaactgagctaa 21331472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 21549101 - 21549044
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||| ||||||| ||||| ||||||||||| |||||||| || ||||||||||||    
T  21549101 cggggttcgaaccctaaaccttgcatatattatacattgtccatatcaactgagctaa 21549044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 23147976 - 23148033
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||| |||||| | ||||||||||||||||| ||||||| || ||||||||||||    
T  23147976 cggggttcgaaccccggacctcgcatatattatgtattgtccttaccaactgagctaa 23148033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 48209209 - 48209266
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||||||||||   |||||||||| ||||||| || ||||||||||||    
T  48209209 cggggtttgaaccctgaaccttatatatattatgtattgtccctatcaactgagctaa 48209266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 50037370 - 50037317
Alignment:
Q  27 gtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||| |||||| ||||| |||||||||||||| || ||||||||||||    
T  50037370 gtttgaaccccgaaccttgcatacattatgcattgtccataccaactgagctaa 50037317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 25727965 - 25728021
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgtacaactgagctaa 79  Q
    |||| ||||||||| | |||| |||||||||||||||||||| |||| || ||||||    
T  25727965 cgggatttgaaccccggaccttgcatatattatgcattgtccatacagctaagctaa 25728021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 27065731 - 27065771
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||||| |||| |||||| |||||||||||||    
T  27065731 ggggtttgaaccctggaccttgcatattttatgcattgtcc 27065771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 54018409 - 54018445
Alignment:
Q  28 tttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| |||||| |||||||||||||    
T  54018409 tttgaaccctgaaccttgcatattttatgcattgtcc 54018445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 5907863 - 5907821
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  5907863 ccggggtttgaaccctggaccttgcatatattatgcattgtcc 5907821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 27533306 - 27533265
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  27533306 cggggtttgaaccccgaaccttgcatatattatgcattgtcc 27533265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 17284012 - 17283957
Alignment:
Q  25 gggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||| |||||||| |||| |||||||||||||||||||| || ||||||||||||    
T  17284012 gggttcgaaccctggaccttgcatatattatgcattgtccttaccaactgagctaa 17283957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 25533038 - 25532995
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| | |||| ||||||||||||||||||||    
T  25533038 gccggggtttgaaccccggaccttgcatatattatgcattgtcc 25532995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 27449445 - 27449484
Alignment:
Q  25 gggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  27449445 gggtttgaaccctgaatcttgcatatattatgcattgtcc 27449484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 34521186 - 34521245
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||| ||||||||||| | |||| |||||||||||||||||||| || ||||||||||||    
T  34521186 gccgaggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 34521245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 45140002 - 45140061
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||| ||| ||| |||| |||||||||||||||||||| || ||||||||||||    
T  45140002 gccggggtttaaactctggaccttgcatatattatgcattgtccataccaactgagctaa 45140061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 50638912 - 50638971
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||| || |||||||| |||| |||||||||||||||||||| || ||||||||||||    
T  50638912 gccgggattcgaaccctggaccttgcatatattatgcattgtccttaccaactgagctaa 50638971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 35474016 - 35473978
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcatt 60  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  35474016 ccggggttcgaaccctgaaccttgcatatattatgcatt 35473978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 8269366 - 8269423
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||| | |||| |||||||||||| ||||||| || ||||||||||||    
T  8269366 cggggtttgaaccccggaccttgcatatattatgtattgtccttaccaactgagctaa 8269423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 17139515 - 17139572
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||| | |||| | |||||||||||||||||| || ||||||||||||    
T  17139515 cggggtttgaaccccggaccttgaatatattatgcattgtccctaccaactgagctaa 17139572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 35011456 - 35011415
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||| |||||||| ||||||| ||||||||||||||||||||    
T  35011456 cgggttttgaaccttgaaccttgcatatattatgcattgtcc 35011415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 8253789 - 8253745
Alignment:
Q  36 ctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||| |||||||||||||||||||| || ||||||||||||    
T  8253789 ctgaaccttgcatatattatgcattgtccataccaactgagctaa 8253745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 9929230 - 9929270
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||| ||||||| |||| ||||||||||||||||||||    
T  9929230 ggggttttaaccctggaccttgcatatattatgcattgtcc 9929270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 13401660 - 13401620
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtc 63  Q
    |||||||||||||| ||||||  ||||||||||||||||||    
T  13401660 cggggtttgaaccccgaaccttacatatattatgcattgtc 13401620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 26803450 - 26803506
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||| | || | |||||||||||||||||||| || ||||||||||||    
T  26803450 ggggtttgaaccccggactttgcatatattatgcattgtccataccaactgagctaa 26803506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 31890764 - 31890804
Alignment:
Q  40 acctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  31890764 acctcgcatatattatgcattgtccttaccaactgagctaa 31890804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 44678020 - 44678072
Alignment:
Q  28 tttgaaccctgaacctcgcatatattatgcattgtccgtac-aactgagctaa 79  Q
    ||||||||| |||||| |||||||||||||||||||  ||| |||||||||||    
T  44678020 tttgaaccccgaaccttgcatatattatgcattgtctatacaaactgagctaa 44678072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 15889474 - 15889417
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||||  |||| |||||||||||||||||||| || ||||||||||||    
T  15889474 cggggtttgaaccctagaccttgcatatattatgcattgtccctaccaactgagctaa 15889417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 16076494 - 16076453
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  16076494 cggggattgaaccctgaaccttgcatatattatgcattgtcc 16076453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 17862037 - 17861985
Alignment:
Q  28 tttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||| | |||||||||||||||||||| || ||||||||||||    
T  17862037 tttgaaccctgaactttgcatatattatgcattgtccctaccaactgagctaa 17861985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 6489072 - 6489013
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||||||   |||| |||||||||||||||||||| || ||||||||||||    
T  6489072 gccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaa 6489013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 22522797 - 22522840
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| | |||| ||||||||||||||||||||    
T  22522797 gccggggtttgaaccccggaccttgcatatattatgcattgtcc 22522840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 40715945 - 40715988
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||||| | |||| ||||||||||||||||||||    
T  40715945 gccggggtttgaaccccggaccttgcatatattatgcattgtcc 40715988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 26166800 - 26166746
Alignment:
Q  25 gggtttgaaccctgaacctcgcatatattatgcattgtccgtacaactgagctaa 79  Q
    |||||||||||||| |||| |||||| | ||||||||||||  ||||||||||||    
T  26166800 gggtttgaaccctggaccttgcatatttgatgcattgtccgaccaactgagctaa 26166746  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 41630109 - 41630151
Alignment:
Q  22 ccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||| || |||||| ||||||||||||||||||||    
T  41630109 ccggggtttgaatcccgaaccttgcatatattatgcattgtcc 41630151  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 11844444 - 11844493
Alignment:
Q  31 gaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||| ||||| |||||||||||||||||||| || ||||||||||||    
T  11844444 gaaccctaaaccttgcatatattatgcattgtccttaccaactgagctaa 11844493  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 13409483 - 13409434
Alignment:
Q  31 gaaccctgaacctcgcatatattatgcattgtccgtac-aactgagctaa 79  Q
    ||||||||||||| |||||||||||||||||||  ||| |||||||||||    
T  13409483 gaaccctgaaccttgcatatattatgcattgtctttactaactgagctaa 13409434  T

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Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 14474899 - 14474858
Alignment:
Q  21 gccggggtttgaaccctgaacctcgcatatattatgcattgt 62  Q
    |||||||||||||||||| |||| ||||||||||||| ||||    
T  14474899 gccggggtttgaaccctggaccttgcatatattatgcgttgt 14474858  T

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Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 34436914 - 34436857
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    |||||||||||||| |  ||| |||||||||||||||||||| || ||||||||||||    
T  34436914 cggggtttgaaccccggcccttgcatatattatgcattgtccctaccaactgagctaa 34436857  T

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Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 37021370 - 37021407
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcatt 60  Q
    |||||||||||||||||| || ||||||||||||||||    
T  37021370 cggggtttgaaccctgaatcttgcatatattatgcatt 37021407  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 43108624 - 43108591
Alignment:
Q  31 gaaccctgaacctcgcatatattatgcattgtcc 64  Q
    ||||||||||||| ||||||||||||||||||||    
T  43108624 gaaccctgaaccttgcatatattatgcattgtcc 43108591  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 18789098 - 18789042
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtccgta-caactgagctaa 79  Q
    ||||||||||||| |||||| |||||| ||||||||||||  || ||||||||||||    
T  18789098 ggggtttgaaccccgaaccttgcatattttatgcattgtctctaccaactgagctaa 18789042  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 40959065 - 40959025
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtc 63  Q
    |||||| ||||||||||| || |||||||||||||||||||    
T  40959065 cggggtctgaaccctgaatcttgcatatattatgcattgtc 40959025  T

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Target: scaffold0143 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 4533 - 4488
Alignment:
Q  19 ttgccggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||| ||||||||||| |||| ||||| ||||||||||||||    
T  4533 ttgccgggatttgaaccctggaccttgcataaattatgcattgtcc 4488  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 72777 - 72814
Alignment:
Q  27 gtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  72777 gtttgaaccctggaccttgcatatattatgcattgtcc 72814  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 161204 - 161163
Alignment:
Q  23 cggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||||||||||| |||||| |||||| |||||||||||||    
T  161204 cggggtttgaaccccgaaccttgcatattttatgcattgtcc 161163  T

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Target: scaffold0238 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 25451 - 25411
Alignment:
Q  24 ggggtttgaaccctgaacctcgcatatattatgcattgtcc 64  Q
    |||||| |||||||| |||| ||||||||||||||||||||    
T  25451 ggggttcgaaccctggaccttgcatatattatgcattgtcc 25411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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