View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19009_low_6 (Length: 596)

Name: NF19009_low_6
Description: NF19009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19009_low_6
NF19009_low_6
[»] chr5 (21 HSPs)
chr5 (315-579)||(18167058-18167318)
chr5 (18-289)||(18167305-18167580)
chr5 (161-244)||(39290807-39290890)
chr5 (154-262)||(9395365-9395473)
chr5 (154-262)||(13103039-13103147)
chr5 (154-262)||(23359957-23360065)
chr5 (154-262)||(36563545-36563653)
chr5 (223-262)||(36595789-36595828)
chr5 (154-256)||(6126845-6126947)
chr5 (153-239)||(14325870-14325956)
chr5 (188-242)||(40138831-40138885)
chr5 (154-256)||(41989414-41989516)
chr5 (154-251)||(2366345-2366442)
chr5 (160-257)||(3346906-3347003)
chr5 (161-262)||(11795183-11795284)
chr5 (161-262)||(13033066-13033167)
chr5 (154-251)||(21575972-21576069)
chr5 (154-242)||(3549554-3549642)
chr5 (154-262)||(17025639-17025747)
chr5 (162-214)||(36595789-36595841)
chr5 (182-262)||(37148990-37149070)
[»] chr2 (21 HSPs)
chr2 (161-257)||(16734803-16734899)
chr2 (162-251)||(12170414-12170503)
chr2 (154-262)||(3055573-3055681)
chr2 (154-262)||(6648526-6648634)
chr2 (154-246)||(12337944-12338036)
chr2 (154-262)||(13197717-13197825)
chr2 (154-262)||(13344499-13344607)
chr2 (154-262)||(15372241-15372349)
chr2 (154-262)||(15896857-15896965)
chr2 (154-262)||(16044324-16044432)
chr2 (182-262)||(30099217-30099297)
chr2 (154-262)||(37666617-37666725)
chr2 (154-262)||(37990020-37990128)
chr2 (154-262)||(41478646-41478754)
chr2 (154-262)||(44398701-44398809)
chr2 (178-257)||(4224988-4225066)
chr2 (155-262)||(44397562-44397669)
chr2 (154-263)||(9047762-9047871)
chr2 (154-251)||(41492903-41493000)
chr2 (154-246)||(16243790-16243882)
chr2 (154-246)||(44804585-44804677)
[»] chr1 (20 HSPs)
chr1 (154-262)||(11897069-11897177)
chr1 (154-262)||(34042711-34042819)
chr1 (154-262)||(17556767-17556876)
chr1 (154-262)||(11989796-11989904)
chr1 (185-251)||(11774539-11774605)
chr1 (156-262)||(47588346-47588452)
chr1 (154-262)||(9981662-9981770)
chr1 (154-262)||(14984852-14984960)
chr1 (182-262)||(16448143-16448223)
chr1 (182-262)||(23278036-23278116)
chr1 (154-262)||(27159365-27159473)
chr1 (154-262)||(31842802-31842910)
chr1 (154-262)||(39401973-39402081)
chr1 (154-262)||(44668100-44668208)
chr1 (154-262)||(47216706-47216814)
chr1 (154-262)||(11795948-11796056)
chr1 (154-262)||(12483635-12483743)
chr1 (154-262)||(26471072-26471180)
chr1 (154-246)||(44955213-44955305)
chr1 (154-262)||(47777488-47777596)
[»] scaffold0650 (1 HSPs)
scaffold0650 (163-243)||(1-81)
[»] chr8 (27 HSPs)
chr8 (162-262)||(17006926-17007026)
chr8 (162-262)||(17570221-17570321)
chr8 (162-251)||(28999063-28999152)
chr8 (154-262)||(3304285-3304393)
chr8 (162-262)||(8587185-8587285)
chr8 (154-262)||(12343147-12343255)
chr8 (154-262)||(43199361-43199469)
chr8 (154-203)||(8587177-8587226)
chr8 (153-250)||(24691985-24692081)
chr8 (154-262)||(54619-54727)
chr8 (154-262)||(2890169-2890277)
chr8 (154-262)||(6552670-6552778)
chr8 (154-262)||(7785785-7785893)
chr8 (154-262)||(12763661-12763769)
chr8 (154-262)||(32114482-32114590)
chr8 (154-262)||(32211370-32211478)
chr8 (154-204)||(28463618-28463668)
chr8 (154-262)||(7805706-7805814)
chr8 (162-262)||(13578872-13578972)
chr8 (158-262)||(15888363-15888467)
chr8 (161-201)||(24692054-24692094)
chr8 (154-262)||(25601007-25601115)
chr8 (182-262)||(31654628-31654708)
chr8 (162-250)||(33057621-33057709)
chr8 (154-262)||(39571210-39571318)
chr8 (185-241)||(42842864-42842920)
chr8 (154-262)||(44498194-44498302)
[»] chr7 (20 HSPs)
chr7 (154-250)||(7269412-7269508)
chr7 (153-251)||(40840125-40840223)
chr7 (154-262)||(7482240-7482348)
chr7 (154-262)||(31319406-31319514)
chr7 (156-262)||(1565738-1565844)
chr7 (161-262)||(36583410-36583511)
chr7 (154-262)||(1738454-1738562)
chr7 (154-262)||(7240764-7240872)
chr7 (154-262)||(9268771-9268879)
chr7 (156-256)||(9575430-9575530)
chr7 (154-262)||(22285714-22285822)
chr7 (162-250)||(36033241-36033329)
chr7 (154-262)||(38441475-38441583)
chr7 (154-262)||(46840875-46840983)
chr7 (154-256)||(33418397-33418499)
chr7 (161-262)||(36016210-36016311)
chr7 (161-262)||(38063927-38064028)
chr7 (154-246)||(4790279-4790371)
chr7 (182-246)||(14706727-14706791)
chr7 (154-262)||(23314146-23314254)
[»] chr4 (24 HSPs)
chr4 (154-262)||(41615683-41615791)
chr4 (162-262)||(17344228-17344328)
chr4 (154-262)||(48336278-48336386)
chr4 (154-251)||(41469773-41469870)
chr4 (154-262)||(3372136-3372244)
chr4 (154-262)||(3422076-3422183)
chr4 (154-214)||(4780358-4780418)
chr4 (154-262)||(5986891-5986999)
chr4 (154-262)||(33621811-33621919)
chr4 (154-262)||(47833626-47833734)
chr4 (154-262)||(47838624-47838732)
chr4 (154-201)||(17344220-17344267)
chr4 (154-257)||(42797752-42797855)
chr4 (156-203)||(45725930-45725977)
chr4 (154-251)||(3904690-3904787)
chr4 (154-203)||(17236862-17236911)
chr4 (161-262)||(50430432-50430533)
chr4 (154-262)||(6121900-6122008)
chr4 (154-262)||(7579325-7579433)
chr4 (154-262)||(20538693-20538801)
chr4 (154-262)||(43900564-43900672)
chr4 (154-262)||(46797740-46797848)
chr4 (154-246)||(51894589-51894681)
chr4 (154-262)||(53337385-53337493)
[»] chr3 (23 HSPs)
chr3 (161-251)||(33942946-33943036)
chr3 (154-262)||(4238609-4238717)
chr3 (154-262)||(9111501-9111609)
chr3 (154-262)||(21295333-21295441)
chr3 (154-262)||(44785403-44785511)
chr3 (153-262)||(8817392-8817501)
chr3 (154-262)||(8437440-8437548)
chr3 (154-262)||(10297994-10298102)
chr3 (154-262)||(17653727-17653835)
chr3 (154-262)||(19557059-19557167)
chr3 (154-262)||(22721946-22722054)
chr3 (154-262)||(34080037-34080145)
chr3 (154-262)||(37508936-37509044)
chr3 (154-262)||(38964407-38964515)
chr3 (154-262)||(46208045-46208153)
chr3 (154-262)||(49823388-49823496)
chr3 (161-242)||(5323241-5323323)
chr3 (166-236)||(32988352-32988422)
chr3 (161-262)||(42170360-42170461)
chr3 (154-251)||(48340423-48340520)
chr3 (154-262)||(2787839-2787947)
chr3 (154-262)||(40691003-40691111)
chr3 (154-262)||(51406688-51406796)
[»] scaffold0464 (1 HSPs)
scaffold0464 (154-262)||(6138-6246)
[»] scaffold0204 (1 HSPs)
scaffold0204 (154-262)||(23800-23908)
[»] scaffold0009 (1 HSPs)
scaffold0009 (154-262)||(49520-49628)
[»] chr6 (14 HSPs)
chr6 (154-262)||(2830350-2830458)
chr6 (154-262)||(6330130-6330238)
chr6 (154-262)||(8382976-8383084)
chr6 (154-262)||(9644711-9644819)
chr6 (154-262)||(9650728-9650836)
chr6 (154-262)||(11572152-11572260)
chr6 (154-262)||(13853600-13853708)
chr6 (154-262)||(26602338-26602446)
chr6 (162-257)||(3421588-3421683)
chr6 (153-262)||(6143569-6143678)
chr6 (185-262)||(13043773-13043850)
chr6 (154-262)||(8099545-8099653)
chr6 (161-257)||(28747148-28747244)
chr6 (154-262)||(33052801-33052909)
[»] scaffold1707 (1 HSPs)
scaffold1707 (161-262)||(1350-1451)
[»] scaffold0482 (1 HSPs)
scaffold0482 (154-262)||(12875-12983)
[»] scaffold0063 (1 HSPs)
scaffold0063 (162-250)||(53356-53443)


Alignment Details
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 315 - 579
Target Start/End: Complemental strand, 18167318 - 18167058
Alignment:
Q  315 tacacgttaaattacaaacatatcaatttataattcataaaacaacattttaaccgtgctattttttaggtctaaatctagtttgtactttgttagtcta 414  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||| |||||||||    
T  18167318 tacacgttaa--tacaaacatatcaatttataattcataaaacaacattttaaccgtgctattttt-agatctaaatcttgtttgtactt-gttagtcta 18167223  T
Q  415 gcgttgactttacctcttcacaatcacatgttggtgaagactccaaattagtcgtttggatccttccatttatcgtattcattaattgtcaagaatgccc 514  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18167222 gcgttgactttagctcttcacaatcacatgttggtaaagactccaaattagtcgtttggatccttccctttatcgtattcattaattgtcaagaatgccc 18167123  T
Q  515 atactacccatatgatcattatgtgatgaggcacatggcaatatttgttggtgttatcctttggt 579  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18167122 atactacacatatgatcattttgtgatgaggcacatggcaatatttgttggtgttatcctttggt 18167058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 289
Target Start/End: Complemental strand, 18167580 - 18167305
Alignment:
Q  18 atgaaaaacaagctgaaatgataaaaatttaatttccggccaaaaaacaatttaatttcctaaattttagtttgttatcaactcgtgataaaaa--ttgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||  ||||    
T  18167580 atgaaaaacaagctgaaatgataaaaatttaatttccggccaaaaaacaatttaatttcctaaattgtagttcgttatcaactcgtgataaaaaaattgt 18167481  T
Q  116 cgctataaatagcattgcattttccttaaaatcactattccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaatta 215  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  18167480 cgctataaatagcattgcattttccttaaaattactattccagttctatttataagaaaaagtttggtcaacaaaaattgacgtatttgattaaaaatta 18167381  T
Q  216 agttcatatacatcaatttttgttgacctaactttcacttattaa--tataatatgaaggcgtatacgttaataca 289  Q
    | | |||||||||||||||||||||| ||||||||| ||||||||  ||||||| |||||| || |||||||||||    
T  18167380 aatccatatacatcaatttttgttgatctaactttctcttattaatatataatacgaaggcatacacgttaataca 18167305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 39290890 - 39290807
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacct 244  Q
    |||||||||||| |||||  | |||||||||||| | |||| | |||||||||| | | || ||||||||||||||||||||||    
T  39290890 ctatttataagagaaagtcgaatcaacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacct 39290807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 9395473 - 9395365
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  9395473 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 9395374  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  9395373 ttataaata 9395365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 13103147 - 13103039
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  13103147 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 13103048  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  13103047 ttataaata 13103039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 23360065 - 23359957
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  23360065 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 23359966  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  23359965 ttataaata 23359957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 36563545 - 36563653
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  36563545 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 36563644  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  36563645 ttataaata 36563653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 36595828 - 36595789
Alignment:
Q  223 atacatcaatttttgttgacctaactttcacttattaata 262  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  36595828 atacatcaatttttgttgacctaactttctcttataaata 36595789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 256
Target Start/End: Complemental strand, 6126947 - 6126845
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  ||||||||||| |||| |||| |    
T  6126947 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctc 6126848  T
Q  254 tta 256  Q
    |||    
T  6126847 tta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 14325870 - 14325956
Alignment:
Q  153 ttccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgtt 239  Q
    ||||| |||||||||||||||||| |||  ||||||||| || | |||||||||| |||||| |||  | ||| ||||| |||||||    
T  14325870 ttccgattctatttataagaaaaaatttgatcaacaaaaattaatgtatttgattcaaaatttagtctagatatatcaaattttgtt 14325956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 40138831 - 40138885
Alignment:
Q  188 aaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgac 242  Q
    ||||||||| ||||||||||||||||| |||||| ||| ||  ||||||||||||    
T  40138831 aaaagttgatgtatttgattaaaaattcagttcaaatatatttatttttgttgac 40138885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 256
Target Start/End: Original strand, 41989414 - 41989516
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  41989414 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 41989513  T
Q  254 tta 256  Q
    |||    
T  41989514 tta 41989516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 2366345 - 2366442
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttc 251  Q
    |||| |||||||||||||| ||| ||  |||||||| |||| | ||||||| |||||| || ||| || ||||||||| |||| || ||| |||||||    
T  2366345 tccgattctatttataagagaaatttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaatacatcaacttttattaaccaaactttc 2366442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 3346906 - 3347003
Alignment:
Q  160 tctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttat 257  Q
    ||||| ||||||| ||||||| ||||||||||||||| |||  |  || ||||||  | ||| |||||||||||||| || |||||| |||| |||||    
T  3346906 tctatatataagagaaagtttcgtcaacaaaagttgatgtacctagtttaaaatttggatcagatacatcaatttttattaacctaattttctcttat 3347003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 11795284 - 11795183
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaa 260  Q
    |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| ||||| ||    
T  11795284 ctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 11795185  T
Q  261 ta 262  Q
    ||    
T  11795184 ta 11795183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 13033167 - 13033066
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaa 260  Q
    |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| ||||| ||    
T  13033167 ctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 13033068  T
Q  261 ta 262  Q
    ||    
T  13033067 ta 13033066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 21576069 - 21575972
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttc 251  Q
    |||||| |||||||||||| ||  ||   |||||||||||||| |||| | |||||||||| ||| || ||||||  | |||||||||||||| ||||    
T  21576069 tccggtcctatttataagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttc 21575972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 3549554 - 3549642
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgac 242  Q
    |||||| |||||||||||| ||| ||   | |||||||||||| ||||| | ||||||||| ||  || |||||| |||||||||||||    
T  3549554 tccggtcctatttataagagaaatttatattaacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgac 3549642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 17025747 - 17025639
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| |||| | ||||||  | |||||| ||||||| |||| |    
T  17025747 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctc 17025648  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  17025647 ttataaata 17025639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 36595789 - 36595841
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaatt 214  Q
    ||||||||||| ||||||  |||||||||| |||| |||| ||||||||||||    
T  36595789 tatttataagagaaagttaggtcaacaaaaattgatgtatctgattaaaaatt 36595841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 37148990 - 37149070
Alignment:
Q  182 gtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaata 262  Q
    ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| ||||| ||||    
T  37148990 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 37149070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 4e-21; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 16734899 - 16734803
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttat 257  Q
    |||||||||||| |||||| ||| |||||||||||| ||||||| ||||||||| ||| || ||||||||| ||||||||||| ||||||| |||||    
T  16734899 ctatttataagagaaagttgagtaaacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttat 16734803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 12170414 - 12170503
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttc 251  Q
    ||||||||||| ||| ||  ||||||||||||||| ||||||  ||||||||| ||| || |||||| || |||| ||||||||| ||||    
T  12170414 tatttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttc 12170503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 3055681 - 3055573
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  3055681 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 3055582  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  3055581 ttataaata 3055573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 6648526 - 6648634
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  |||| ||||||||||| |||| |    
T  6648526 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctc 6648625  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  6648626 ttataaata 6648634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 12337944 - 12338036
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaa 246  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  ||||||||||||||||    
T  12337944 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaa 12338036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 13197717 - 13197825
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  13197717 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 13197816  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  13197817 ttataaata 13197825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 13344607 - 13344499
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||   |||||||||||||| |||| |  ||||||||| ||| || ||||||  |||||||||||||||| |||| |    
T  13344607 tccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctc 13344508  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  13344507 ttataaata 13344499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 15372349 - 15372241
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  15372349 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 15372250  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  15372249 ttataaata 15372241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 15896965 - 15896857
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  15896965 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 15896866  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  15896865 ttataaata 15896857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 16044324 - 16044432
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  |||||| |||||||| |||| |  ||||||||| |||||| ||||||  | |||||||||||||| |||| |    
T  16044324 tccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctc 16044423  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  16044424 ttataaata 16044432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 30099217 - 30099297
Alignment:
Q  182 gtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaata 262  Q
    ||||||||||||||| |||| | |||||||||| | | || ||||||  |||||||||||||||| |||| ||||| ||||    
T  30099217 gtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaata 30099297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 37666617 - 37666725
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  |||||| |||||||| |||| |  ||||||||| |||||| ||||||  | |||||||||||||| |||| |    
T  37666617 tccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctc 37666716  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  37666717 ttataaata 37666725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 37990020 - 37990128
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  37990020 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 37990119  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  37990120 ttataaata 37990128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 41478646 - 41478754
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  41478646 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 41478745  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  41478746 ttataaata 41478754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 44398809 - 44398701
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  44398809 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 44398710  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  44398709 ttataaata 44398701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 4225066 - 4224988
Alignment:
Q  178 tttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttat 257  Q
    |||||||||||||||||  ||||||||||| |||||| |   || |||||||||||| |||||||| |||||| ||||||    
T  4225066 tttagtcaacaaaagttatcgtatttgattcaaaatttataccagatacatcaatttatgttgacc-aacttttacttat 4224988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 44397669 - 44397562
Alignment:
Q  155 ccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcact 254  Q
    ||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| ||    
T  44397669 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 44397570  T
Q  255 tattaata 262  Q
    ||| ||||    
T  44397569 tataaata 44397562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 9047762 - 9047871
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||| ||||||||| |||| |    
T  9047762 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctc 9047861  T
Q  254 ttattaatat 263  Q
    |||| |||||    
T  9047862 ttataaatat 9047871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 41492903 - 41493000
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttc 251  Q
    |||||| |||||||||||| ||| ||  ||||||||||||||| |||| |  |||||||||  || || ||||||  | |||||||||||||| ||||    
T  41492903 tccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttc 41493000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 16243790 - 16243882
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaa 246  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | ||||||||||||||    
T  16243790 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 16243882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 44804585 - 44804677
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaa 246  Q
    |||||| |||||||||||| ||  || ||| |||||||||||| |||| |  ||||||||| ||| || ||||||  |||| |||||||||||    
T  44804585 tccggtcctatttataagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaa 44804677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 4e-21; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 11897177 - 11897069
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||| ||  ||||||||||||||| ||||  | ||||||||| |||||| ||||||||| ||||||||||||||||||| |    
T  11897177 tccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttctc 11897078  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  11897077 ttataaata 11897069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 34042819 - 34042711
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    ||||||||||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  |||||||||||||||| |||| |    
T  34042819 tccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctc 34042720  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  34042719 ttataaata 34042711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 17556876 - 17556767
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatataca-tcaatttttgttgacctaactttca 252  Q
    |||||| |||||||||||| ||| ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||| | || |||||||||||||||||||     
T  17556876 tccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttct 17556777  T
Q  253 cttattaata 262  Q
    ||||| ||||    
T  17556776 cttataaata 17556767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 11989904 - 11989796
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||| | ||| || |||||| |||| |||| ||||||| ||||||||| ||| || ||| || | |||||||||||| ||||||| |    
T  11989904 tccggtcctatttataaaagaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaactttctc 11989805  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  11989804 ttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 11774605 - 11774539
Alignment:
Q  185 aacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttc 251  Q
    ||||||||||||||||| |  || |||||| |||| |  ||||||||||||||||||||||||||||    
T  11774605 aacaaaagttgacgtatctagttcaaaattcagtttaattacatcaatttttgttgacctaactttc 11774539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 47588346 - 47588452
Alignment:
Q  156 cggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcactt 255  Q
    ||||| ||||||||||| ||  ||  ||||||||||||||| |||| | |||||||||| ||| || ||||||  | |||||||||||||| |||| |||    
T  47588346 cggttttatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctctt 47588445  T
Q  256 attaata 262  Q
    || ||||    
T  47588446 ataaata 47588452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 9981770 - 9981662
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  9981770 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 9981671  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  9981670 ttataaata 9981662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 14984960 - 14984852
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  14984960 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 14984861  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  14984860 ttataaata 14984852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 16448143 - 16448223
Alignment:
Q  182 gtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaata 262  Q
    ||||||||||||| | |||| || || |||||| ||| || ||||||||| ||||||||||| ||||||| ||||| ||||    
T  16448143 gtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaata 16448223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 23278036 - 23278116
Alignment:
Q  182 gtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaata 262  Q
    ||||||||||||||| |||| |  ||||||||| ||| || ||||||  |||||||||||||||| |||| ||||| ||||    
T  23278036 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaata 23278116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 27159365 - 27159473
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  27159365 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 27159464  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  27159465 ttataaata 27159473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 31842802 - 31842910
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  31842802 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 31842901  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  31842902 ttataaata 31842910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 39401973 - 39402081
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  39401973 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 39402072  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  39402073 ttataaata 39402081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 44668100 - 44668208
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  44668100 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 44668199  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  44668200 ttataaata 44668208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 47216706 - 47216814
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  47216706 tccggtactatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 47216805  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  47216806 ttataaata 47216814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 11796056 - 11795948
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || || |||  | |||||||||||||| |||| |    
T  11796056 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctc 11795957  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  11795956 ttataaata 11795948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 12483635 - 12483743
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| ||||||  || |||||| |||  | ||||||  | |||||||||||||| |||| |    
T  12483635 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctc 12483734  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  12483735 ttataaata 12483743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 26471072 - 26471180
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||   |||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  26471072 tccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 26471171  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  26471172 ttataaata 26471180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 44955213 - 44955305
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaa 246  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | ||||||||||||||    
T  44955213 tccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44955305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 47777488 - 47777596
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  || |||||| ||| || ||||||  | |||||||||||||| |||| |    
T  47777488 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctc 47777587  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  47777588 ttataaata 47777596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 1 - 81
Alignment:
Q  163 atttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacc 243  Q
    |||||||||| |||||  |||||||||||||||| ||||||| ||||||||| ||| || ||||||||| |||||||||||    
T  1 atttataagagaaagtcgagtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgacc 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 262
Target Start/End: Complemental strand, 17007026 - 17006926
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaat 261  Q
    ||||||||||| ||| ||||||||| ||||||||| |||| ||||||| |||| ||| || || |||||| ||||||||||| ||||||| ||||| |||    
T  17007026 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaat 17006927  T
Q  262 a 262  Q
    |    
T  17006926 a 17006926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 262
Target Start/End: Original strand, 17570221 - 17570321
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaat 261  Q
    ||||||||||| ||| ||||||||| ||||||||| |||| ||||||| |||| ||| || || |||||| ||||||||||| ||||||| ||||| |||    
T  17570221 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaat 17570320  T
Q  262 a 262  Q
    |    
T  17570321 a 17570321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 28999063 - 28999152
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttc 251  Q
    |||||||| |||||| || |||||| ||||||| |||||| |  ||||||||| |||  | ||||||||||||||||||||| |||||||    
T  28999063 tatttatatgaaaaatttaagtcaataaaagtttacgtatgtagttaaaaattcagtctagatacatcaatttttgttgaccaaactttc 28999152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 3304285 - 3304393
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||||||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  3304285 tccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 3304384  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  3304385 ttataaata 3304393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 262
Target Start/End: Complemental strand, 8587285 - 8587185
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaat 261  Q
    ||||||||||| ||| || |||||| ||||||||| |||| |  ||||||||| |||  | ||||||||| ||||||||||| ||||||| ||||| |||    
T  8587285 tatttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaat 8587186  T
Q  262 a 262  Q
    |    
T  8587185 a 8587185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 12343147 - 12343255
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||| ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  12343147 tccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 12343246  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  12343247 ttataaata 12343255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 43199361 - 43199469
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||| ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  43199361 tccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 43199460  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  43199461 ttataaata 43199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 8587177 - 8587226
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtattt 203  Q
    |||||| |||||||||||| ||||||| ||||||||||||||| ||||||    
T  8587177 tccggtcctatttataagagaaagtttggtcaacaaaagttgatgtattt 8587226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 153 - 250
Target Start/End: Original strand, 24691985 - 24692081
Alignment:
Q  153 ttccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaacttt 250  Q
    ||||||| |||||| ||| | ||| ||  |||||||||||||||  ||| || |||||| || |||||| ||||||||| ||||||||||||||||||    
T  24691985 ttccggtcctatttttaaaagaaatttgggtcaacaaaagttgatatatctggttaaaa-ttcagttcagatacatcaacttttgttgacctaacttt 24692081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 54619 - 54727
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  54619 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 54718  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  54719 ttataaata 54727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 2890169 - 2890277
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  2890169 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 2890268  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  2890269 ttataaata 2890277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 6552778 - 6552670
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  6552778 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 6552679  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  6552678 ttataaata 6552670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 7785785 - 7785893
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  7785785 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 7785884  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  7785885 ttataaata 7785893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 12763661 - 12763769
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  12763661 tccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 12763760  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  12763761 ttataaata 12763769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 32114482 - 32114590
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||||||  ||  |||||||||| |||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  32114482 tccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 32114581  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  32114582 ttataaata 32114590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 32211370 - 32211478
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  |||||||||| |||| |||| |  ||||||||| ||| || ||||||  |||||||||||||||| |||| |    
T  32211370 tccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctc 32211469  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  32211470 ttataaata 32211478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 28463618 - 28463668
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttg 204  Q
    |||||| |||||||||||| ||||||  ||||||||||||||| |||||||    
T  28463618 tccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatttg 28463668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 7805706 - 7805814
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  |||| |||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  7805706 tccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 7805805  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  7805806 ttataaata 7805814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 262
Target Start/End: Complemental strand, 13578972 - 13578872
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaat 261  Q
    ||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| |||||| ||||||  | |||| ||||||||| |||| ||||| |||    
T  13578972 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaat 13578873  T
Q  262 a 262  Q
    |    
T  13578872 a 13578872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 262
Target Start/End: Original strand, 15888363 - 15888467
Alignment:
Q  158 gttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttat 257  Q
    ||||||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| | | || ||||||  | |||||||||||||| |||| |||||    
T  15888363 gttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttat 15888462  T
Q  258 taata 262  Q
     ||||    
T  15888463 aaata 15888467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 24692094 - 24692054
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtat 201  Q
    |||||||||||||||||||  ||||||||||||||| ||||    
T  24692094 ctatttataagaaaaagttaggtcaacaaaagttgatgtat 24692054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 25601007 - 25601115
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||| | |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  25601007 tccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 25601106  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  25601107 ttataaata 25601115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 31654708 - 31654628
Alignment:
Q  182 gtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaata 262  Q
    ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| ||||| ||||    
T  31654708 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 31654628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 33057709 - 33057621
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaacttt 250  Q
    ||||||||||| ||||||| |||||||||| |||| |||| || |||||| || | | |  ||||| ||||||||||||| | ||||||    
T  33057709 tatttataagagaaagtttggtcaacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatccaacttt 33057621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 39571210 - 39571318
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | ||||||||| |||| |||| |    
T  39571210 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctc 39571309  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  39571310 ttataaata 39571318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 42842864 - 42842920
Alignment:
Q  185 aacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttga 241  Q
    ||||||||||||   || ||||| |||||| |||||| |||||||||||||||||||    
T  42842864 aacaaaagttgatacatctgattcaaaatttagttcaaatacatcaatttttgttga 42842920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 44498194 - 44498302
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||| ||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  44498194 tccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 44498293  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  44498294 ttataaata 44498302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 7269412 - 7269508
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaacttt 250  Q
    |||||| |||||||||||| ||||||  || |||||||||||| | || || ||||||||| |||| | ||||||||||||||||||||| ||||||    
T  7269412 tccggtcctatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaacttt 7269508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 40840125 - 40840223
Alignment:
Q  153 ttccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttc 251  Q
    ||||||| |||||||||||| ||| ||| ||||||||||||||| ||| ||  ||||||||| ||| || ||||||  ||||||||| || ||||||||    
T  40840125 ttccggtcctatttataagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttc 40840223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 7482348 - 7482240
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| |||||| ||||||  | |||||||||||||| |||| |    
T  7482348 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctc 7482249  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  7482248 ttataaata 7482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 31319406 - 31319514
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    ||||||||||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  31319406 tccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 31319505  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  31319506 ttataaata 31319514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 1565738 - 1565844
Alignment:
Q  156 cggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcactt 255  Q
    ||||||||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |||    
T  1565738 cggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctt 1565837  T
Q  256 attaata 262  Q
    || ||||    
T  1565838 ataaata 1565844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 36583511 - 36583410
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaa 260  Q
    |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||||||| || ||||||  | |||||||||||||| |||| ||||| ||    
T  36583511 ctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaa 36583412  T
Q  261 ta 262  Q
    ||    
T  36583411 ta 36583410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 1738454 - 1738562
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  1738454 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 1738553  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  1738554 ttataaata 1738562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 7240872 - 7240764
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  7240872 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 7240773  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  7240772 ttataaata 7240764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 9268879 - 9268771
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  9268879 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 9268780  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  9268779 ttataaata 9268771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 9575530 - 9575430
Alignment:
Q  156 cggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcactt 255  Q
    |||| |||||||||||| ||||||| |||||||||| |||| |||| |  ||||||||| |||  | |||| | || ||||||||||| ||||||| |||    
T  9575530 cggtcctatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctctt 9575431  T
Q  256 a 256  Q
    |    
T  9575430 a 9575430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 22285822 - 22285714
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  22285822 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 22285723  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  22285722 ttataaata 22285714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 36033241 - 36033329
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaacttt 250  Q
    ||||||||||| ||| ||  ||||||||||||||| |||| |||| ||||||| | |||| | |||| ||||||||||| || ||||||    
T  36033241 tatttataagataaatttaggtcaacaaaagttgatgtatctgatcaaaaattcaattcagacacataaatttttgttggccaaacttt 36033329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 38441583 - 38441475
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| |||||| ||||||  | |||||||||| ||| |||| |    
T  38441583 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctc 38441484  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  38441483 ttataaata 38441475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 46840983 - 46840875
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  46840983 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 46840884  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  46840883 ttataaata 46840875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 256
Target Start/End: Complemental strand, 33418499 - 33418397
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  33418499 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 33418400  T
Q  254 tta 256  Q
    |||    
T  33418399 tta 33418397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 36016210 - 36016311
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaa 260  Q
    |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| ||||| ||    
T  36016210 ctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 36016309  T
Q  261 ta 262  Q
    ||    
T  36016310 ta 36016311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 38063927 - 38064028
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaa 260  Q
    |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| ||||| ||    
T  38063927 ctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 38064026  T
Q  261 ta 262  Q
    ||    
T  38064027 ta 38064028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 4790371 - 4790279
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaa 246  Q
    |||||| |||||||||||| ||  ||  ||||| ||||||||| |||| |  ||||||||| ||| || ||||||  ||||||||||||||||    
T  4790371 tccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaa 4790279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 14706791 - 14706727
Alignment:
Q  182 gtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaa 246  Q
    |||||||||||||||  ||| ||||||| |||| | |||| ||||||||| ||||||| ||||||    
T  14706791 gtcaacaaaagttgatatatctgattaacaattcaattcagatacatcaacttttgttaacctaa 14706727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 23314146 - 23314254
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  |||||||||||||||  ||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  23314146 tccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 23314245  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  23314246 ttataaata 23314254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 41615683 - 41615791
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||| ||   |||||||||||||| ||||||  ||||||||||||| || |||||| || |||||||||||||| |||| |    
T  41615683 tccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctc 41615782  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  41615783 ttataaata 41615791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 162 - 262
Target Start/End: Complemental strand, 17344328 - 17344228
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaat 261  Q
    ||||||||||| ||| ||   |||||||||||||| ||||  ||||||||||| |||||| ||||||||| |||||||||  |||||||| ||||| |||    
T  17344328 tatttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaat 17344229  T
Q  262 a 262  Q
    |    
T  17344228 a 17344228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 48336386 - 48336278
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||||||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  48336386 tccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 48336287  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  48336286 ttataaata 48336278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 41469773 - 41469870
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttc 251  Q
    |||||| |||||||||||| ||  ||| ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| ||||    
T  41469773 tccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 41469870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 3372244 - 3372136
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  3372244 tccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 3372145  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  3372144 ttataaata 3372136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 3422183 - 3422076
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| |||||| ||||||  | |||||||||||||| |||| |    
T  3422183 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctc 3422085  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  3422084 ttataaata 3422076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 4780418 - 4780358
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaatt 214  Q
    |||||| |||||||||||| ||| ||| ||||||||||||| | |||| ||||||||||||    
T  4780418 tccggtcctatttataagagaaattttggtcaacaaaagttaatgtatctgattaaaaatt 4780358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 5986999 - 5986891
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| ||||||  ||||||||| ||| || ||||||  | |||||||||||||  |||| |    
T  5986999 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctatatttctc 5986900  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  5986899 ttataaata 5986891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 33621919 - 33621811
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  33621919 tccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 33621820  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  33621819 ttataaata 33621811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 47833734 - 47833626
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  47833734 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 47833635  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  47833634 ttataaata 47833626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 47838624 - 47838732
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||| ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | ||||||||||| || |||| |    
T  47838624 tccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctc 47838723  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  47838724 ttataaata 47838732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 17344220 - 17344267
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtat 201  Q
    ||||||||||||||||||| |||||| | |||||||||||||| ||||    
T  17344220 tccggttctatttataagagaaagttaaatcaacaaaagttgatgtat 17344267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 42797855 - 42797752
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  42797855 tccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 42797756  T
Q  254 ttat 257  Q
    ||||    
T  42797755 ttat 42797752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 45725977 - 45725930
Alignment:
Q  156 cggttctatttataagaaaaagtttagtcaacaaaagttgacgtattt 203  Q
    |||| |||||||||||| ||||||| ||||||||||||| ||||||||    
T  45725977 cggtcctatttataagagaaagtttcgtcaacaaaagttaacgtattt 45725930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 3904690 - 3904787
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttc 251  Q
    |||||| |||||||||||| ||  ||  |||||||||| |||| ||||||  ||||||||| ||| || ||||||  | |||||||||||||| ||||    
T  3904690 tccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 3904787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 17236911 - 17236862
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtattt 203  Q
    |||||| |||||||||||||||| ||  ||||||||||||||| ||||||    
T  17236911 tccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtattt 17236862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 50430432 - 50430533
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaa 260  Q
    |||||||||||| | | ||  |||||||||| |||| |||| || ||||||||| | | || ||||||||| ||||||||||| ||||| | ||||| ||    
T  50430432 ctatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaa 50430531  T
Q  261 ta 262  Q
    ||    
T  50430532 ta 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 6121900 - 6122008
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | ||||||||| |||| |||| |    
T  6121900 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctc 6121999  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  6122000 ttataaata 6122008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 7579433 - 7579325
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    ||||||||||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| | | || ||||||  | ||||||| |||||| |||| |    
T  7579433 tccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctc 7579334  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  7579333 ttataaata 7579325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 20538693 - 20538801
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  |||||||||| |||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  20538693 tccggtcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 20538792  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  20538793 ttataaata 20538801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 43900672 - 43900564
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  || |||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  43900672 tccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctc 43900573  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  43900572 ttataaata 43900564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 46797848 - 46797740
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  |||||||||||||||  ||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  46797848 tccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 46797749  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  46797748 ttataaata 46797740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 51894589 - 51894681
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaa 246  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| || ||||||||| ||| || | ||||  | ||||||||||||||    
T  51894589 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaa 51894681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 53337493 - 53337385
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||| ||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  53337493 tccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 53337394  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  53337393 ttataaata 53337385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 161 - 251
Target Start/End: Original strand, 33942946 - 33943036
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttc 251  Q
    |||||||||||| ||| ||  ||||||||||||||| |||| |  ||||||||| ||| || |||||| || |||||||||||||||||||    
T  33942946 ctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttc 33943036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 4238717 - 4238609
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||| ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  4238717 tccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 4238618  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  4238617 ttataaata 4238609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 9111501 - 9111609
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| |||||| ||||||  | |||||||||||||| |||| |    
T  9111501 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctc 9111600  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  9111601 ttataaata 9111609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 21295333 - 21295441
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| | |||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  21295333 tccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21295432  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  21295433 ttataaata 21295441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 44785403 - 44785511
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    ||||||||||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  44785403 tccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 44785502  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  44785503 ttataaata 44785511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 8817392 - 8817501
Alignment:
Q  153 ttccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttca 252  Q
    ||||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| ||||     
T  8817392 ttccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 8817491  T
Q  253 cttattaata 262  Q
    ||||| ||||    
T  8817492 cttataaata 8817501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 8437548 - 8437440
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  || |||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||| ||||||||| |||| |    
T  8437548 tccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctc 8437449  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  8437448 ttataaata 8437440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 10298102 - 10297994
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  10298102 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 10298003  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  10298002 ttataaata 10297994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 17653835 - 17653727
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  17653835 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 17653736  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  17653735 ttataaata 17653727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 19557059 - 19557167
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  19557059 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 19557158  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  19557159 ttataaata 19557167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 22722054 - 22721946
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  22722054 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 22721955  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  22721954 ttataaata 22721946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 34080037 - 34080145
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  34080037 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 34080136  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  34080137 ttataaata 34080145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 37509044 - 37508936
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  37509044 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 37508945  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  37508944 ttataaata 37508936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 38964515 - 38964407
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||| ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | ||||||||| |||| |||| |    
T  38964515 tccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctc 38964416  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  38964415 ttataaata 38964407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 46208153 - 46208045
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  46208153 tccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 46208054  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  46208053 ttataaata 46208045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 49823388 - 49823496
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  49823388 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 49823487  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  49823488 ttataaata 49823496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 5323323 - 5323241
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgatt-aaaaattaagttcatatacatcaatttttgttgac 242  Q
    ||||||||||| |||| ||  ||||||||||||||| ||||||| || ||||||| | |||| |||||| | |||||||||||    
T  5323323 ctatttataagtaaaatttgggtcaacaaaagttgatgtatttggttaaaaaattcaattcaaatacattattttttgttgac 5323241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 32988422 - 32988352
Alignment:
Q  166 tataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaattttt 236  Q
    ||||||||||| || |||| ||||||||| ||||||||| | |||||||  ||||| ||| ||||||||||    
T  32988422 tataagaaaaaattaagtctacaaaagttaacgtatttggtcaaaaatttggttcaaatatatcaattttt 32988352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 42170360 - 42170461
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaa 260  Q
    |||||||||||| ||  ||  ||||||||||||||| |||| || ||||||||| | | || ||||||  | |||||||||||||| |||| ||||| ||    
T  42170360 ctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaa 42170459  T
Q  261 ta 262  Q
    ||    
T  42170460 ta 42170461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 48340520 - 48340423
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttc 251  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| ||||    
T  48340520 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 48340423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 2787839 - 2787947
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  |||| |||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  2787839 tccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 2787938  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  2787939 ttataaata 2787947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 40691003 - 40691111
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | ||||||| |||||| |||| |    
T  40691003 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctc 40691102  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  40691103 ttataaata 40691111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 51406796 - 51406688
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  |||||||||| |||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  51406796 tccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 51406697  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  51406696 ttataaata 51406688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 6138 - 6246
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||||||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  6138 tccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctc 6237  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  6238 ttataaata 6246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 23908 - 23800
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||||||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  23908 tccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 23809  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  23808 ttataaata 23800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 49628 - 49520
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| ||||||  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  49628 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 49529  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  49528 ttataaata 49520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 2830458 - 2830350
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  2830458 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 2830359  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  2830358 ttataaata 2830350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 6330238 - 6330130
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  6330238 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 6330139  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  6330138 ttataaata 6330130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 8382976 - 8383084
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  8382976 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 8383075  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  8383076 ttataaata 8383084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 9644819 - 9644711
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  |||| ||||||||||| |||| |    
T  9644819 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctc 9644720  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  9644719 ttataaata 9644711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 9650836 - 9650728
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  |||| ||||||||||| |||| |    
T  9650836 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctc 9650737  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  9650736 ttataaata 9650728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 11572152 - 11572260
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  11572152 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 11572251  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  11572252 ttataaata 11572260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 13853600 - 13853708
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  13853600 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 13853699  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  13853700 ttataaata 13853708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 26602446 - 26602338
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  26602446 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 26602347  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  26602346 ttataaata 26602338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 3421588 - 3421683
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttat 257  Q
    ||||||||||||||| || ||||||||||||||||  ||| | |||||||| | | |  | ||| ||||| ||||||||||  |||||||||||||    
T  3421588 tatttataagaaaaatttgagtcaacaaaagttgatatatcttattaaaaaatcaatctagatatatcaacttttgttgactcaactttcacttat 3421683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 6143678 - 6143569
Alignment:
Q  153 ttccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttca 252  Q
    |||||||||||||||||||| ||  ||  | ||||||||||||| |||| |  ||||||||| | | || ||||||  | |||||||||||||| ||||     
T  6143678 ttccggttctatttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttct 6143579  T
Q  253 cttattaata 262  Q
    ||||| ||||    
T  6143578 cttataaata 6143569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 13043850 - 13043773
Alignment:
Q  185 aacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaata 262  Q
    |||||||||||| |||| |  ||||||||| | |||| ||||||  |||||||||||||||| |||| ||||| ||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaata 13043773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 8099653 - 8099545
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| | | || ||||||  | |||||||||||||| |||| |    
T  8099653 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctc 8099554  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  8099553 ttataaata 8099545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 28747148 - 28747244
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttat 257  Q
    |||||||||||| ||  ||  ||||||||||||||| |||| | |||||||||| ||| || ||||||  | ||||||||| |||| |||| |||||    
T  28747148 ctatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttat 28747244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 33052801 - 33052909
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  ||||| ||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  33052801 tccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 33052900  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  33052901 ttataaata 33052909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 1451 - 1350
Alignment:
Q  161 ctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcacttattaa 260  Q
    |||||||||||| ||  ||  ||||||||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| ||||| ||    
T  1451 ctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 1352  T
Q  261 ta 262  Q
    ||    
T  1351 ta 1350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 12983 - 12875
Alignment:
Q  154 tccggttctatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaactttcac 253  Q
    |||||| |||||||||||| ||  ||  |||| |||||||||| |||| |  ||||||||| ||| || ||||||  | |||||||||||||| |||| |    
T  12983 tccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 12884  T
Q  254 ttattaata 262  Q
    |||| ||||    
T  12883 ttataaata 12875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 53356 - 53443
Alignment:
Q  162 tatttataagaaaaagtttagtcaacaaaagttgacgtatttgattaaaaattaagttcatatacatcaatttttgttgacctaacttt 250  Q
    ||||||||| | ||||||| |  |||||||||||| |||| |  ||||||||||| |||| ||||| ||| ||||||||||||| ||||    
T  53356 tatttataaaagaaagtttggataacaaaagttgatgtatctcgttaaaaattaaattcagatacaacaa-ttttgttgacctaccttt 53443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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