View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19009_low_75 (Length: 251)

Name: NF19009_low_75
Description: NF19009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19009_low_75
NF19009_low_75
[»] chr7 (34 HSPs)
chr7 (103-247)||(9230574-9230718)
chr7 (122-250)||(9557860-9557988)
chr7 (123-247)||(25491510-25491634)
chr7 (121-248)||(26782185-26782315)
chr7 (113-250)||(13715053-13715190)
chr7 (113-247)||(18375579-18375711)
chr7 (138-250)||(40702969-40703081)
chr7 (122-228)||(47729917-47730023)
chr7 (113-250)||(25024695-25024831)
chr7 (152-250)||(45197815-45197911)
chr7 (155-250)||(10224063-10224160)
chr7 (139-247)||(14088923-14089035)
chr7 (139-247)||(14398941-14399053)
chr7 (141-249)||(23179780-23179886)
chr7 (155-250)||(26493619-26493717)
chr7 (155-242)||(34468376-34468463)
chr7 (154-220)||(11019616-11019682)
chr7 (162-250)||(27387219-27387309)
chr7 (152-217)||(19400185-19400252)
chr7 (155-198)||(8395287-8395330)
chr7 (155-198)||(36631938-36631981)
chr7 (173-250)||(38575214-38575292)
chr7 (189-245)||(8866807-8866863)
chr7 (155-195)||(14775596-14775636)
chr7 (155-195)||(15226049-15226089)
chr7 (189-242)||(26625782-26625835)
chr7 (189-242)||(38637458-38637511)
chr7 (132-166)||(5895915-5895949)
chr7 (155-197)||(36659282-36659324)
chr7 (155-196)||(3113138-3113179)
chr7 (189-242)||(3113198-3113251)
chr7 (189-242)||(7003664-7003717)
chr7 (189-242)||(7049535-7049588)
chr7 (189-242)||(37001315-37001368)
[»] chr6 (16 HSPs)
chr6 (113-250)||(30621336-30621474)
chr6 (136-250)||(25599327-25599441)
chr6 (141-250)||(32441868-32441977)
chr6 (136-250)||(11971131-11971245)
chr6 (155-250)||(24074584-24074681)
chr6 (150-227)||(12180423-12180500)
chr6 (164-242)||(31028005-31028083)
chr6 (152-250)||(1296681-1296780)
chr6 (113-199)||(12648930-12649017)
chr6 (122-233)||(25340627-25340740)
chr6 (152-230)||(3051051-3051135)
chr6 (155-194)||(399731-399770)
chr6 (155-190)||(34253232-34253267)
chr6 (189-242)||(29744308-29744361)
chr6 (155-196)||(34947842-34947883)
chr6 (189-242)||(34947902-34947955)
[»] chr4 (48 HSPs)
chr4 (113-250)||(4325583-4325720)
chr4 (121-250)||(53692908-53693037)
chr4 (113-250)||(3074541-3074678)
chr4 (113-235)||(17359319-17359441)
chr4 (113-250)||(1147671-1147808)
chr4 (114-250)||(21753496-21753632)
chr4 (136-236)||(31002616-31002716)
chr4 (146-250)||(31944788-31944891)
chr4 (122-225)||(24104479-24104582)
chr4 (152-250)||(12211131-12211229)
chr4 (177-250)||(8897856-8897929)
chr4 (156-250)||(42843882-42843978)
chr4 (152-250)||(55464563-55464663)
chr4 (152-250)||(25182780-25182882)
chr4 (152-232)||(48131059-48131139)
chr4 (170-242)||(30110999-30111071)
chr4 (155-199)||(36381351-36381395)
chr4 (155-198)||(25931865-25931908)
chr4 (155-198)||(40530197-40530240)
chr4 (113-199)||(13398527-13398613)
chr4 (102-195)||(26438236-26438329)
chr4 (155-199)||(6236579-6236623)
chr4 (155-195)||(20130356-20130396)
chr4 (155-195)||(34406294-34406334)
chr4 (155-195)||(43357022-43357062)
chr4 (182-244)||(30821564-30821624)
chr4 (155-193)||(17510258-17510296)
chr4 (189-242)||(7769594-7769647)
chr4 (189-242)||(30215822-30215875)
chr4 (154-199)||(33135444-33135489)
chr4 (152-197)||(50204092-50204137)
chr4 (155-195)||(13013306-13013346)
chr4 (155-199)||(13390460-13390504)
chr4 (155-242)||(6255346-6255435)
chr4 (173-250)||(20114537-20114615)
chr4 (189-242)||(1818693-1818746)
chr4 (189-242)||(10351972-10352025)
chr4 (189-242)||(13398636-13398689)
chr4 (189-242)||(29319429-29319482)
chr4 (189-242)||(30076727-30076780)
chr4 (182-230)||(30821488-30821534)
chr4 (189-242)||(42332849-42332902)
chr4 (189-242)||(43142661-43142714)
chr4 (189-242)||(44157662-44157715)
chr4 (152-197)||(44157746-44157791)
chr4 (173-214)||(50720061-50720102)
chr4 (152-192)||(37577885-37577925)
chr4 (155-195)||(47501890-47501930)
[»] chr1 (32 HSPs)
chr1 (140-250)||(25017558-25017668)
chr1 (109-250)||(40864580-40864722)
chr1 (119-250)||(48606484-48606615)
chr1 (122-250)||(30558880-30559008)
chr1 (121-250)||(30054993-30055122)
chr1 (119-250)||(52753687-52753823)
chr1 (138-250)||(22891994-22892106)
chr1 (135-247)||(26272817-26272929)
chr1 (114-250)||(14499069-14499206)
chr1 (122-250)||(9637293-9637424)
chr1 (141-248)||(32379751-32379857)
chr1 (139-242)||(15209316-15209417)
chr1 (155-250)||(35948885-35948981)
chr1 (121-241)||(49465384-49465494)
chr1 (154-250)||(41753124-41753222)
chr1 (152-242)||(41971294-41971384)
chr1 (177-250)||(17874950-17875023)
chr1 (155-200)||(32981053-32981098)
chr1 (153-202)||(33490457-33490506)
chr1 (152-206)||(170357-170413)
chr1 (152-250)||(32885872-32885972)
chr1 (152-200)||(320714-320762)
chr1 (152-250)||(11843800-11843902)
chr1 (152-195)||(17446416-17446459)
chr1 (155-202)||(42309947-42309994)
chr1 (109-250)||(51053141-51053284)
chr1 (155-196)||(7434531-7434572)
chr1 (189-242)||(11957434-11957487)
chr1 (122-179)||(17875557-17875614)
chr1 (189-242)||(23314032-23314085)
chr1 (189-242)||(35908594-35908647)
chr1 (155-199)||(23314117-23314161)
[»] chr8 (36 HSPs)
chr8 (113-250)||(13152260-13152397)
chr8 (121-250)||(9256561-9256690)
chr8 (141-250)||(10467923-10468032)
chr8 (104-250)||(28846777-28846923)
chr8 (140-239)||(42447107-42447206)
chr8 (104-250)||(24592194-24592340)
chr8 (136-250)||(40145899-40146013)
chr8 (154-250)||(24333889-24333985)
chr8 (137-247)||(2826196-2826306)
chr8 (113-250)||(21958684-21958823)
chr8 (137-242)||(40469891-40469996)
chr8 (152-242)||(3436272-3436363)
chr8 (141-250)||(27190943-27191051)
chr8 (179-250)||(32342988-32343059)
chr8 (179-250)||(32355475-32355546)
chr8 (179-250)||(32359594-32359665)
chr8 (20-103)||(33754039-33754121)
chr8 (179-247)||(32372128-32372196)
chr8 (173-250)||(10396374-10396451)
chr8 (155-195)||(24019404-24019444)
chr8 (152-196)||(27046929-27046973)
chr8 (155-195)||(28524312-28524352)
chr8 (155-195)||(29727394-29727434)
chr8 (155-195)||(39915628-39915668)
chr8 (138-229)||(14447020-14447111)
chr8 (154-193)||(23403188-23403227)
chr8 (140-183)||(34228109-34228152)
chr8 (189-245)||(4405043-4405099)
chr8 (155-199)||(15839397-15839441)
chr8 (155-195)||(29632502-29632542)
chr8 (170-210)||(34228174-34228214)
chr8 (176-247)||(16532563-16532634)
chr8 (189-242)||(16787101-16787154)
chr8 (189-242)||(34135881-34135934)
chr8 (173-214)||(34845136-34845177)
chr8 (189-242)||(36409522-36409575)
[»] chr5 (31 HSPs)
chr5 (113-250)||(22712766-22712902)
chr5 (141-247)||(1280756-1280862)
chr5 (113-247)||(3055657-3055791)
chr5 (136-250)||(27168692-27168806)
chr5 (152-250)||(23244475-23244573)
chr5 (139-250)||(15730865-15730978)
chr5 (122-250)||(8785954-8786079)
chr5 (155-250)||(204022-204119)
chr5 (152-242)||(28801913-28802003)
chr5 (155-199)||(13819086-13819130)
chr5 (155-198)||(1775380-1775423)
chr5 (152-204)||(192847-192899)
chr5 (155-195)||(26282330-26282370)
chr5 (155-195)||(36292622-36292662)
chr5 (155-199)||(39656532-39656576)
chr5 (194-249)||(22542059-22542114)
chr5 (200-250)||(11852887-11852937)
chr5 (173-250)||(2229087-2229164)
chr5 (155-199)||(16156017-16156061)
chr5 (155-199)||(19986567-19986611)
chr5 (140-179)||(12098052-12098091)
chr5 (152-194)||(31500721-31500763)
chr5 (155-193)||(39435828-39435866)
chr5 (189-242)||(10036945-10036998)
chr5 (155-192)||(10037029-10037066)
chr5 (189-242)||(12277931-12277984)
chr5 (189-242)||(13819015-13819068)
chr5 (189-242)||(16155929-16155982)
chr5 (189-242)||(17331072-17331125)
chr5 (189-242)||(37255670-37255723)
chr5 (155-195)||(16332917-16332957)
[»] chr3 (26 HSPs)
chr3 (109-250)||(24988675-24988816)
chr3 (113-250)||(9743440-9743577)
chr3 (141-240)||(3856761-3856860)
chr3 (136-250)||(15668117-15668231)
chr3 (140-247)||(43137301-43137408)
chr3 (113-250)||(50091439-50091576)
chr3 (136-247)||(37381757-37381869)
chr3 (122-247)||(51262154-51262278)
chr3 (109-204)||(17073854-17073949)
chr3 (152-250)||(51408512-51408612)
chr3 (139-243)||(42269130-42269234)
chr3 (158-242)||(1185554-1185638)
chr3 (162-250)||(31989201-31989291)
chr3 (162-250)||(53710570-53710660)
chr3 (153-242)||(5136331-5136419)
chr3 (207-250)||(22485915-22485958)
chr3 (181-246)||(5341080-5341145)
chr3 (177-250)||(22934729-22934802)
chr3 (155-195)||(40080758-40080798)
chr3 (142-190)||(42964793-42964841)
chr3 (155-202)||(34083124-34083171)
chr3 (155-195)||(39772906-39772946)
chr3 (141-179)||(24130397-24130435)
chr3 (152-198)||(27936261-27936307)
chr3 (189-242)||(11017346-11017399)
chr3 (154-242)||(35515034-35515122)
[»] chr2 (30 HSPs)
chr2 (113-250)||(31392968-31393104)
chr2 (141-250)||(12539745-12539854)
chr2 (122-242)||(19951707-19951827)
chr2 (139-248)||(45261737-45261846)
chr2 (139-247)||(33453080-33453188)
chr2 (152-242)||(26238653-26238743)
chr2 (152-243)||(7071568-7071659)
chr2 (177-250)||(26656271-26656344)
chr2 (119-199)||(30547148-30547228)
chr2 (152-219)||(18425859-18425928)
chr2 (140-199)||(27925638-27925697)
chr2 (155-242)||(32126230-32126317)
chr2 (113-242)||(4554302-4554432)
chr2 (173-250)||(1955001-1955078)
chr2 (173-250)||(34907754-34907831)
chr2 (173-250)||(39368464-39368540)
chr2 (155-195)||(6402817-6402857)
chr2 (155-195)||(17444036-17444076)
chr2 (155-199)||(42443095-42443139)
chr2 (152-200)||(45122216-45122264)
chr2 (152-199)||(8058350-8058397)
chr2 (104-179)||(35649532-35649607)
chr2 (155-196)||(17035761-17035802)
chr2 (155-196)||(17090272-17090313)
chr2 (155-192)||(41250637-41250674)
chr2 (155-192)||(16406240-16406277)
chr2 (189-242)||(18982582-18982635)
chr2 (155-192)||(18982657-18982694)
chr2 (171-236)||(40607999-40608064)
chr2 (189-242)||(42443023-42443076)
[»] scaffold0726 (1 HSPs)
scaffold0726 (136-250)||(1055-1169)
[»] scaffold0198 (1 HSPs)
scaffold0198 (138-250)||(1568-1680)
[»] scaffold0178 (1 HSPs)
scaffold0178 (122-247)||(17913-18040)
[»] scaffold0019 (1 HSPs)
scaffold0019 (152-250)||(134757-134857)
[»] scaffold0015 (1 HSPs)
scaffold0015 (113-250)||(214025-214164)
[»] scaffold0002 (2 HSPs)
scaffold0002 (139-247)||(435241-435348)
scaffold0002 (155-194)||(479467-479506)
[»] scaffold0170 (1 HSPs)
scaffold0170 (152-250)||(9248-9348)
[»] scaffold0154 (1 HSPs)
scaffold0154 (152-242)||(32253-32343)
[»] scaffold0069 (1 HSPs)
scaffold0069 (155-195)||(18684-18724)


Alignment Details
Target: chr7 (Bit Score: 109; Significance: 6e-55; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 9230718 - 9230574
Alignment:
Q  103 gatcattggtggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaa 202  Q
    ||||| ||| ||||| || ||||||||||||  |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9230718 gatcagtggcggagctagaaattttatcaagcctgggcaaaattttgattgcaaattcacatgtgacataatatataaatagtcataaatcaaaataaaa 9230619  T
Q  203 gaggctcgtcattttgtcgataaaagtacaatttgaaataagaga 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9230618 gaggctcgtcattttgtcgataaaagtacaatttgaaataagaga 9230574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 122 - 250
Target Start/End: Complemental strand, 9557988 - 9557860
Alignment:
Q  122 aattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcg 221  Q
    ||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| ||| ||||||||||||||    
T  9557988 aattttatcgagtctgagcaaaattttgaccgcaaatttacatgtgacataatatataaattgtcataaatcaaaataaaaaaggttcgtcattttgtcg 9557889  T
Q  222 ataaaagtacaatttgaaataagagagat 250  Q
    |||| ||||||||||||||||||||||||    
T  9557888 ataagagtacaatttgaaataagagagat 9557860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 25491510 - 25491634
Alignment:
Q  123 attttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcga 222  Q
    |||||||  ||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||| |    
T  25491510 attttatagagtctgggcaaaattttaaccgcaaatttacatgtgacataatatataaatagtcataaattgaaataaaatagactcgtcattttgtcaa 25491609  T
Q  223 taaaagtacaatttgaaataagaga 247  Q
     ||||||||||||||||||||||||    
T  25491610 caaaagtacaatttgaaataagaga 25491634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 26782185 - 26782315
Alignment:
Q  121 gaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagt---cataaatcgaaataaaagaggctcgtcatttt 217  Q
    |||||||||  ||| ||||||||||||||| | |||||||||||| |||||||||||||||||||   |||||||| |||||||| ||||||||||||||    
T  26782185 gaattttattgagtctgggcaaaattttgatctcaaattcacatgcgacataatatataaatagtagtcataaatcaaaataaaataggctcgtcatttt 26782284  T
Q  218 gtcgataaaagtacaatttgaaataagagag 248  Q
    ||||||||||||||||||| |||||||||||    
T  26782285 gtcgataaaagtacaatttaaaataagagag 26782315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 113 - 250
Target Start/End: Original strand, 13715053 - 13715190
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgaca-taatatataaatagtcataaatcgaaataaaagaggctcgt 211  Q
    ||||| ||||||||||| || | ||||||||||||| ||| |||||||| || ||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  13715053 ggagccaggaattttataaaat-tgggcaaaattttaaccacaaattcatatatgacaataatatatgaatagtcataaattgaaataaaagaggctcgt 13715151  T
Q  212 cattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  13715152 cattttgtcaataaaagtacaatttgaaataaaagagat 13715190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 113 - 247
Target Start/End: Complemental strand, 18375711 - 18375579
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| ||||||||| |  |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  18375711 ggagccaggaattttgtagagtatgggtaaaattttgacagcaaat-cacatgtgacataatatataaatagtcataaatcgaaa-gaaagtggctcgtc 18375614  T
Q  213 attttgtcgataaaagtacaatttgaaataagaga 247  Q
    ||||| || ||||||||||||||||||||||||||    
T  18375613 attttatccataaaagtacaatttgaaataagaga 18375579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 138 - 250
Target Start/End: Complemental strand, 40703081 - 40702969
Alignment:
Q  138 ggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttg 237  Q
    ||||||||||||||| |||||||||||||| || |||||||||||||||||||||| |||||||| || || |||||||||| ||||||||||||||||     
T  40703081 ggcaaaattttgacctcaaattcacatgtgccacaatatataaatagtcataaatcaaaataaaatagacttgtcattttgtagataaaagtacaattta 40702982  T
Q  238 aaataagagagat 250  Q
    |||||||||||||    
T  40702981 aaataagagagat 40702969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 47730023 - 47729917
Alignment:
Q  122 aattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcg 221  Q
    ||||||||  ||| || ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  47730023 aattttatagagtttgtgcaaaattttgaccgtaaattcaaatgtgacataatatataaataatcataaatcgaaataaaagaggctcgtcattttgtca 47729924  T
Q  222 ataaaag 228  Q
    |||||||    
T  47729923 ataaaag 47729917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 25024831 - 25024695
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||  || || ||    
T  25024831 ggagccaggaattttatagagtctgagcaaaattttaaccgcaaattcacatatgacataatatataaataatcataaatcaaaataaaaagggttcatc 25024732  T
Q  213 attttgtcgataaaagtacaatttgaaataagagagat 250  Q
    | |||||| | |||||||||||||||||||||||||||    
T  25024731 a-tttgtcaacaaaagtacaatttgaaataagagagat 25024695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 45197911 - 45197815
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||  |||||||||| || | |||||||||||||||||||||||||||    
T  45197911 cgcaaattcacatgtgacataatata--aatggtcataaatcgaaataaaagagattcgtcattttttcaacaaaagtacaatttgaaataagagagat 45197815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 10224160 - 10224063
Alignment:
Q  155 aaattcacatgtgacataatatata--aatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||| |||||||| ||||||||||  ||||||||||||||||||||||||||| || |||||||||| |||||| ||||||||||||||||||||||    
T  10224160 aaattgacatgtgatataatatatataaatagtcataaatcgaaataaaagaggttcttcattttgtcaataaaaatacaatttgaaataagagagat 10224063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 14089035 - 14088923
Alignment:
Q  139 gcaaaattttgaccgcaaattcac----atgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaat 234  Q
    |||||||||| |||||||||| ||    ||||||||||||||| ||||||||||||||| |||||||| |||||||||| |||||| |  ||||||||||    
T  14089035 gcaaaattttaaccgcaaatttacttacatgtgacataatatacaaatagtcataaatcaaaataaaataggctcgtcagtttgtcaaccaaagtacaat 14088936  T
Q  235 ttgaaataagaga 247  Q
    |||||||||||||    
T  14088935 ttgaaataagaga 14088923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 14399053 - 14398941
Alignment:
Q  139 gcaaaattttgaccgcaaattcac----atgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaat 234  Q
    |||||||||| |||||||||| ||    ||||||||||||||| ||||||||||||||| |||||||| |||||||||| |||||| |  ||||||||||    
T  14399053 gcaaaattttaaccgcaaatttacttacatgtgacataatatacaaatagtcataaatcaaaataaaataggctcgtcagtttgtcaaccaaagtacaat 14398954  T
Q  235 ttgaaataagaga 247  Q
    |||||||||||||    
T  14398953 ttgaaataagaga 14398941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 249
Target Start/End: Original strand, 23179780 - 23179886
Alignment:
Q  141 aaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaa 240  Q
    ||||||||||  | |||||||||| |||||  ||||||||||||| |||||| ||| ||| |||| ||||||||||| |||||||||||| |||||||||    
T  23179780 aaaattttgattgtaaattcacatatgaca--atatataaatagttataaattgaagtaagagagactcgtcattttttcgataaaagtataatttgaaa 23179877  T
Q  241 taagagaga 249  Q
    |||||||||    
T  23179878 taagagaga 23179886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 26493619 - 26493717
Alignment:
Q  155 aaattcacatgtgacataatat--ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtaca-atttgaaataagagagat 250  Q
    ||||||||||||||||||||||  ||||||||||||| ||| |||||||||||| |||||||||| || | |||||||||  |||||||||||||||||    
T  26493619 aaattcacatgtgacataatatatataaatagtcatatatcaaaataaaagaggatcgtcattttttctacaaaagtacaggtttgaaataagagagat 26493717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 34468376 - 34468463
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||| |||||||||||| |||||||||| ||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  34468376 aaattcacatgtgatataatatataaacagtcataaattgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 34468463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 11019616 - 11019682
Alignment:
Q  154 caaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtc 220  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| || ||||||||||    
T  11019616 caaattcacatgtgacataatatataaacagtcataaatcaaaataaaagaggttcctcattttgtc 11019682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 27387219 - 27387309
Alignment:
Q  162 catgtgacataatat--ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||| || | |||||||||| || |||||||| ||||    
T  27387219 catgtgacataatatatataaatagtcataaatcgaaatagaagaggttcgtcattttttcaacaaaagtacaacttaaaataagaaagat 27387309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 19400252 - 19400185
Alignment:
Q  152 cgcaaattcacatgtgacataatatata--aatagtcataaatcgaaataaaagaggctcgtcatttt 217  Q
    |||||||||| |||||||||||||||||  |||||||||||||| |||||||||||| ||||||||||    
T  19400252 cgcaaattcatatgtgacataatatatataaatagtcataaatcaaaataaaagaggttcgtcatttt 19400185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 8395330 - 8395287
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaat 198  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  8395330 aaattcacatgtgacataatatataaacagtcataaatcgaaat 8395287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 36631981 - 36631938
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaat 198  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  36631981 aaattcacatgtgacataatatataaacagtcataaatcgaaat 36631938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 38575214 - 38575292
Alignment:
Q  173 atatataaatagtcataaatcgaaataaaagaggctcgtca-ttttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||||||||||||||||||||||||||||| || ||| |||| || | |||||||||| || |||||||| ||||    
T  38575214 atatataaatagtcataaatcgaaataaaagaggttcatcatttttttcaacaaaagtacaacttaaaataagaaagat 38575292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 8866807 - 8866863
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataaga 245  Q
    |||||||||||||||||| |  |||||||||| ||||||||||||||| ||||||||    
T  8866807 aaatcgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataaga 8866863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 14775596 - 14775636
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  14775596 aaattcacatatgacataatatataaatagtcataaatcga 14775636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 15226049 - 15226089
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  15226049 aaattcacatatgacataatatataaatagtcataaatcga 15226089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 26625835 - 26625782
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| ||||||||||||||| |||||    
T  26625835 aaatcgaaataaaagaggtttatcattttgtcaataaaagtacaatttcaaata 26625782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 38637458 - 38637511
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| ||||||||||||||| |||||    
T  38637458 aaatcgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaata 38637511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 5895915 - 5895949
Alignment:
Q  132 agtatgggcaaaattttgaccgcaaattcacatgt 166  Q
    |||||||||||||||||||| ||||||||||||||    
T  5895915 agtatgggcaaaattttgactgcaaattcacatgt 5895949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 36659324 - 36659282
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaa 197  Q
    |||||||||||||||||||||||| ||  ||||||||||||||    
T  36659324 aaattcacatgtgacataatatatcaacggtcataaatcgaaa 36659282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 3113138 - 3113179
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaa 196  Q
    |||||||||||||| |||||||||||| | ||||||||||||    
T  3113138 aaattcacatgtgatataatatataaacaatcataaatcgaa 3113179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 3113198 - 3113251
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  3113198 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 3113251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 7003717 - 7003664
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  7003717 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 7003664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 7049588 - 7049535
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  7049588 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 7049535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 37001315 - 37001368
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||| ||||||||||||| |  |||||||||| ||||||||||||||| |||||    
T  37001315 aaattgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaata 37001368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 2e-51; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 30621474 - 30621336
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaat-aaaagaggctcgt 211  Q
    ||||| |||||||||||| ||| |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||    
T  30621474 ggagctaggaattttatcgagtttgggcaaagttttgatcgcaaattcacatgcgacataatatataaatagtcataaatcaaaataaaaagaggctcgt 30621375  T
Q  212 cattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30621374 cattttgtcgataaaagtacaatttgaaataagagagat 30621336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 25599441 - 25599327
Alignment:
Q  136 tgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatt 235  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25599441 tgggcaaaattttgaccgcaaattcacatgcgacatgatatataaatagtcataaatcgaaataaaataggctcgtcattttgtcgataaaagtacaatt 25599342  T
Q  236 tgaaataagagagat 250  Q
    | |||||||||||||    
T  25599341 ttaaataagagagat 25599327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 32441868 - 32441977
Alignment:
Q  141 aaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaa 240  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32441868 aaaattttgattgcaaattcacatgcgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaa 32441967  T
Q  241 taagagagat 250  Q
    ||||||||||    
T  32441968 taagagagat 32441977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 11971245 - 11971131
Alignment:
Q  136 tgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatt 235  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | ||||||||| | || |||||||||||    
T  11971245 tgggcaaaattttaaccgcaaattcacatgtgacataatatataaatagtcataaatcaagataaaagaggtttgtcattttgacaattaaagtacaatt 11971146  T
Q  236 tgaaataagagagat 250  Q
    |||||||||||||||    
T  11971145 tgaaataagagagat 11971131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 24074681 - 24074584
Alignment:
Q  155 aaattcacatgtgacataatatataa--atagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||  ||||| ||||||| |||||||||||| |||||||||| || | ||||||||||||| |||||||||||||    
T  24074681 aaattcacatgtgacataatatataataatagtaataaatcaaaataaaagagggtcgtcattttttctacaaaagtacaatttaaaataagagagat 24074584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 12180423 - 12180500
Alignment:
Q  150 accgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaa 227  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||    
T  12180423 accgcagattcacatgcgacataatatataaatagtcataaatcgaaataaaataggctcatcattttatcgataaaa 12180500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 31028005 - 31028083
Alignment:
Q  164 tgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | |||||||| | ||||||||||||| |||||    
T  31028005 tgtgacataatatataaatagtcataaatcgaaataaaagaggttccttattttgtcaacaaaagtacaatttaaaata 31028083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 1296780 - 1296681
Alignment:
Q  152 cgcaaattcacatgtgacataatatata--aatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagaga 249  Q
    |||||||||| |||||||||||||||||  |||||||||||||  ||||||||| || ||||||||||||| | |||||||||||||||||||||| |||    
T  1296780 cgcaaattcaaatgtgacataatatatataaatagtcataaattaaaataaaagtggttcgtcattttgtc-acaaaagtacaatttgaaataagataga 1296682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 12649017 - 12648930
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggc-aaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    ||||| |||||||||||  ||||||||| |||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||||    
T  12649017 ggagctaggaattttattgagtatgggcgaaaattttgaccacaaatttacatgtggcataatatataaatagtcatacatcgaaata 12648930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 25340740 - 25340627
Alignment:
Q  122 aattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcat--tttgt 219  Q
    ||||||||  ||| || |||||||||| |||| ||||| | || ||||||||||||||||||||| |||||||||||| ||||| ||||||||  |||||    
T  25340740 aattttatagagtctgtgcaaaattttaaccgtaaatttatatatgacataatatataaatagtcctaaatcgaaatagaagagactcgtcattatttgt 25340641  T
Q  220 cgataaaagtacaa 233  Q
    | ||||||||||||    
T  25340640 caataaaagtacaa 25340627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 3051135 - 3051051
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaata------gtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagta 230  Q
    |||||||||||||||||||||||||||| |||      || ||||||| |||||||||||| |||||||||| || | |||||||    
T  3051135 cgcaaattcacatgtgacataatatatatatatatatagtaataaatcaaaataaaagaggatcgtcattttttctacaaaagta 3051051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 399770 - 399731
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcg 194  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  399770 aaattcacatgtgatataatatataaacagtcataaatcg 399731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 34253267 - 34253232
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataa 190  Q
    ||||||||||||||||||||||||||||||| ||||    
T  34253267 aaattcacatgtgacataatatataaatagttataa 34253232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 29744361 - 29744308
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  29744361 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 29744308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 34947842 - 34947883
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaa 196  Q
    |||||||||||||| |||||||||||| | ||||||||||||    
T  34947842 aaattcacatgtgatataatatataaacaatcataaatcgaa 34947883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 34947902 - 34947955
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  34947902 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 34947955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 9e-51; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 4325720 - 4325583
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| || ||||| ||| || ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  4325720 ggagccagaaatttcatcgagcatgggcaaaattttgaccgcaaatttacatgtgatataatatataaatagtcataaatttaaataaaagaggctcgtc 4325621  T
Q  213 attttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4325620 attttgtcgataaaagtacaatttgaaataagagagat 4325583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 121 - 250
Target Start/End: Original strand, 53692908 - 53693037
Alignment:
Q  121 gaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtc 220  Q
    |||||||||| ||| ||| ||||||||| |  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53692908 gaattttatcgagtttggacaaaattttaattgcaaattcacatgcgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtc 53693007  T
Q  221 gataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||||||    
T  53693008 gataaaagtacaatttgaaataagagagat 53693037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 3074678 - 3074541
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| |||||||||||| ||| |||| ||||||||||| | ||||||||||  ||||||||||||||||||||||||||||||||||| ||| || |||    
T  3074678 ggagctaggaattttatcgagtctgggtaaaattttgactgtaaattcacatacgacataatatataaatagtcataaatcgaaataaatgagacttgtc 3074579  T
Q  213 attttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  3074578 attttgtcgataaaagtacaatttgaaataaaagagat 3074541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 17359441 - 17359319
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| |||||||||||| || ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  17359441 ggagcaaggaattttatcgagcatgtgcaaaattttgactgcaaattcacatgtgacataatatataaataatcataaatcgaaataaaagaggcacgtc 17359342  T
Q  213 attttgtcgataaaagtacaatt 235  Q
    ||||||| ||| |||||||||||    
T  17359341 attttgttgatgaaagtacaatt 17359319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 1147808 - 1147671
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| |||||||||||| ||| || || ||||||||| | ||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||| |    
T  1147808 ggagctaggaattttatcgagtctgtgctaaattttgatcacaaattcacatgctacataatatataaatagttataaatcaaaataaaagaggctcggc 1147709  T
Q  213 attttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  1147708 attttgtcgataaaaatacaatttgaaataagagagat 1147671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 21753496 - 21753632
Alignment:
Q  114 gagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtca 213  Q
    ||||||| ||||||||| ||  || | ||||||||||| | |||||||||| |||||||||||||||||| | |||||||||||||||| ||||||||||    
T  21753496 gagcgagaaattttatcgagcctgagtaaaattttgactgtaaattcacatatgacataatatataaataattataaatcgaaataaaataggctcgtca 21753595  T
Q  214 ttttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||| ||||||||||||||| ||| |||||||||    
T  21753596 ttttgtcaataaaagtacaatttaaaacaagagagat 21753632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 31002616 - 31002716
Alignment:
Q  136 tgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatt 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||  || |||||||||| ||||||||||||||    
T  31002616 tgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcaaaatacaagagattcatcattttgtcaataaaagtacaatt 31002715  T
Q  236 t 236  Q
    |    
T  31002716 t 31002716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 31944891 - 31944788
Alignment:
Q  146 tttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataaga 245  Q
    |||||||| |||| |||||| ||||||||||||||||| ||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31944891 tttgaccgtaaat-cacatgcgacataatatataaataatcaaaaattgaaataaaagagactcgtcattttgtcgataaaagtacaatttgaaataaga 31944793  T
Q  246 gagat 250  Q
    |||||    
T  31944792 gagat 31944788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 24104479 - 24104582
Alignment:
Q  122 aattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcg 221  Q
    ||||||||| ||  |||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||    
T  24104479 aattttatcgagcttgggtaaaattttgaccgcatattcacatgtgacataatatataaacagtcatagaacgaaataaaagaggctcgtcattttatcg 24104578  T
Q  222 ataa 225  Q
    ||||    
T  24104579 ataa 24104582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 12211131 - 12211229
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||  |||||||||| || | ||||||||||||||| |||||||||||    
T  12211131 cgcaaattcacatgtgacataatatataaataatcataaatcgaaataaaaaagattcgtcattttatcaacaaaagtacaatttgagataagagagat 12211229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 8897856 - 8897929
Alignment:
Q  177 ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||| | |||||||||||||||||||||||||||    
T  8897856 ataaagagtcataaatcaaaataaaagaggttcgtcattttgtcaacaaaagtacaatttgaaataagagagat 8897929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 42843978 - 42843882
Alignment:
Q  156 aattcacatgtgacataatatata--aatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||| || | ||||||||||||| ||| ||| |||||    
T  42843978 aattcacatgtgacgtaatatatataaatagtcataaatcgaaataaaagaggttcgtcattttttcaacaaaagtacaatttaaaacaagtgagat 42843882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 55464563 - 55464663
Alignment:
Q  152 cgcaaattcacatgtgacataatatata--aatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagaga 249  Q
    |||| ||||| |||||||||||||||||  ||| ||| ||||||||||||||||||| |||||||||| || | ||||||| |||||||||||||| |||    
T  55464563 cgcatattcatatgtgacataatatatataaattgtcgtaaatcgaaataaaagaggttcgtcattttttcaacaaaagtataatttgaaataagaaaga 55464662  T
Q  250 t 250  Q
    |    
T  55464663 t 55464663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 25182780 - 25182882
Alignment:
Q  152 cgcaaattcacatgtgacataatat------ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataaga 245  Q
    |||||||||||||||||||||||||      |||||||||||||||| ||||||||| ||| ||||||||||||| | ||||| ||||||| ||||||||    
T  25182780 cgcaaattcacatgtgacataatatgtatatataaatagtcataaat-gaaataaaa-aggttcgtcattttgtcaacaaaagcacaatttaaaataaga 25182877  T
Q  246 gagat 250  Q
    |||||    
T  25182878 gagat 25182882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 48131139 - 48131059
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtaca 232  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||||||| ||| || || ||||||| | |||||||||    
T  48131139 cgcaaattaacatgtgacataatatataaacattcataaatcgaaataaaaaaggttcctccttttgtcaacaaaagtaca 48131059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 30111071 - 30110999
Alignment:
Q  170 ataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||||||||| |||||||| ||| || | |||||||| | ||||||||||||| |||||    
T  30111071 ataatatataaatagtcataaatcaaaataaaataggttctttattttgtcaacaaaagtacaatttaaaata 30110999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 36381351 - 36381395
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  36381351 aaattcacatgtgacataatatataaacagtcataaatcgaaata 36381395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 25931908 - 25931865
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaat 198  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  25931908 aaattcacatgtgacataatatataaacagtcataaatcgaaat 25931865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 40530240 - 40530197
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaat 198  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  40530240 aaattcacatgtgacataatatataaacagtcataaatcgaaat 40530197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 13398527 - 13398613
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    ||||| ||||| ||||| ||||  ||||||||  || | || |||||||||||||||||||||||| || |||||||||||||||||    
T  13398527 ggagccaggaaatttatgaagttcgggcaaaaaatttatcgtaaattcacatgtgacataatatatcaacagtcataaatcgaaata 13398613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 26438236 - 26438329
Alignment:
Q  102 agatcattggtggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    |||||| ||| ||||| ||||| |||||  ||  |||||||||  || | || ||||||||||||||||||||||||||| |||||||||||||    
T  26438236 agatcagtggcggagccaggaaatttatggagcctgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcga 26438329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 6236623 - 6236579
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  6236623 aaattcatatgtgacataatatataaacagtcataaatcgaaata 6236579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 20130396 - 20130356
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  20130396 aaattcacatgtgacataatatataaacagtcataaatcga 20130356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 34406294 - 34406334
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  34406294 aaattcacatgtgacataatatataaacagtcataaatcga 34406334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 43357062 - 43357022
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  43357062 aaattcacatgtgacataatatataaacagtcataaatcga 43357022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 30821564 - 30821624
Alignment:
Q  182 tagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataag 244  Q
    |||||||| |||||||  |||||| || ||||||||||||||||||||||||||| |||||||    
T  30821564 tagtcatagatcgaaa--aaagagacttgtcattttgtcgataaaagtacaatttaaaataag 30821624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 17510258 - 17510296
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatc 193  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  17510258 aaattcacatgtgacataatatataaacagtcataaatc 17510296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 7769647 - 7769594
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| ||||||||||||||| |||||    
T  7769647 aaatcgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaata 7769594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 30215822 - 30215875
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| ||||||||||||||| |||||    
T  30215822 aaatcgaaataaaagaggtttatcattttgtcaataaaagtacaatttcaaata 30215875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 33135444 - 33135489
Alignment:
Q  154 caaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||    
T  33135444 caaattcacatgtgacataatatatcaacagtcataaatcaaaata 33135489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 50204092 - 50204137
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaa 197  Q
    |||||||| |||||||||||||||||| || |||||||||||||||    
T  50204092 cgcaaatttacatgtgacataatatatcaacagtcataaatcgaaa 50204137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 13013346 - 13013306
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  13013346 aaattcacatgtgatataatatataaacagtcataaatcga 13013306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 13390460 - 13390504
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    |||||||||||||||||||||||| || ||||||||||| |||||    
T  13390460 aaattcacatgtgacataatatatcaacagtcataaatcaaaata 13390504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 6255435 - 6255346
Alignment:
Q  155 aaattcacatgtgacataatatata--aatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    ||||||| | |||||||||||||||  |||||| ||||||| | |||||||||  || ||||||| || | ||||||||| |||||||||    
T  6255435 aaattcatacgtgacataatatatataaatagtaataaatcaagataaaagagaatcatcattttttctacaaaagtacagtttgaaata 6255346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 20114615 - 20114537
Alignment:
Q  173 atatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcga-taaaagtacaatttgaaataagagagat 250  Q
    ||||||| ||||||| | |||||||||||||| | |||| ||||  || |  |||||||||||||||||||||||||||    
T  20114615 atatatatatagtcacatatcgaaataaaagaagttcgttatttcttcaacaaaaagtacaatttgaaataagagagat 20114537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 1818746 - 1818693
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  1818746 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 1818693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 10351972 - 10352025
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  10351972 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 10352025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 13398636 - 13398689
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  13398636 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 13398689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 29319429 - 29319482
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  29319429 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 29319482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 30076727 - 30076780
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  30076727 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 30076780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 30821488 - 30821534
Alignment:
Q  182 tagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagta 230  Q
    |||||||| |||||||  |||||| ||||||||||||||||||||||||    
T  30821488 tagtcatagatcgaaa--aaagagactcgtcattttgtcgataaaagta 30821534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 42332849 - 42332902
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  ||| |||||| ||||||||||||||| |||||    
T  42332849 aaatcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaata 42332902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 43142661 - 43142714
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  ||| |||||| ||||||||||||||| |||||    
T  43142661 aaatcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaata 43142714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 44157715 - 44157662
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  44157715 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 44157662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 44157791 - 44157746
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaa 197  Q
    ||||||||||||||||||||||||||| || ||| |||||| ||||    
T  44157791 cgcaaattcacatgtgacataatatatcaacagttataaattgaaa 44157746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 50720061 - 50720102
Alignment:
Q  173 atatataaatagtcataaatcgaaataaaagaggctcgtcat 214  Q
    ||||||||||||||||||||| |||||||| ||| |||||||    
T  50720061 atatataaatagtcataaatcaaaataaaaaaggatcgtcat 50720102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 37577925 - 37577885
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaat 192  Q
    ||||||||||||| |||||||||||||||| | ||||||||    
T  37577925 cgcaaattcacatatgacataatatataaacaatcataaat 37577885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 47501930 - 47501890
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    |||||||||||||| |||||||||||| | |||||||||||    
T  47501930 aaattcacatgtgatataatatataaacaatcataaatcga 47501890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 6e-49; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 140 - 250
Target Start/End: Complemental strand, 25017668 - 25017558
Alignment:
Q  140 caaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaa 239  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  25017668 caaaattttgaccgcaaatttacatgtgacataatatataaatagtcataaatcgaaataaaagaggcttgtcattttgtcgataaaaatacaatttgaa 25017569  T
Q  240 ataagagagat 250  Q
    |||||||||||    
T  25017568 ataagagagat 25017558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 40864580 - 40864722
Alignment:
Q  109 tggtggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcat-aaatcgaaataaaagaggc 207  Q
    ||||||||  ||||||||||||  || ||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| | |    
T  40864580 tggtggagtcaggaattttatcgtgtctggacaaaattttgaccgcaaatttacatgtgacataatatataaatagtcataaaatcgaaataaaagtgac 40864679  T
Q  208 tcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40864680 tcgtcattttgtcgataaaagtacaatttgaaataagagagat 40864722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 48606484 - 48606615
Alignment:
Q  119 aggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttg 218  Q
    |||||||||||  ||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||  |||||||||||     
T  48606484 aggaattttatagagtctgagcaaaattttgaccgcaaattcacatgtaacataatatataaatagtcataaattgaaataaaagaaactcgtcattttt 48606583  T
Q  219 tcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||||||||||||||||| |||||||||    
T  48606584 tcgataaaagtacaatttgaaacaagagagat 48606615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 122 - 250
Target Start/End: Original strand, 30558880 - 30559008
Alignment:
Q  122 aattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcg 221  Q
    ||||||||  ||| || |||| |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||     
T  30558880 aattttatagagtttgcgcaagattttgactgtaaattcacatgtgacataatatataaatagtcataaatcaaaataaaagaggctcatcattttgtca 30558979  T
Q  222 ataaaagtacaatttgaaataagagagat 250  Q
    |||||||||||||||||||||||||||||    
T  30558980 ataaaagtacaatttgaaataagagagat 30559008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 121 - 250
Target Start/End: Complemental strand, 30055122 - 30054993
Alignment:
Q  121 gaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtc 220  Q
    |||||||||  ||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||  ||||||||    
T  30055122 gaattttatagagtctggacaaaattttgaccgcaaattcacatatgacataatatataaatagtcataaatcaaaataaaagagactcgcaattttgtc 30055023  T
Q  221 gataaaagtacaatttgaaataagagagat 250  Q
     ||||||||||||||| |||||||||||||    
T  30055022 aataaaagtacaatttaaaataagagagat 30054993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 52753687 - 52753823
Alignment:
Q  119 aggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaata-----aaagaggctcgtca 213  Q
    |||||||| ||| ||| ||| ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||     ||||||||||||||    
T  52753687 aggaatttaatcgagtttggacaaaattttgatcgtaaattcacatgcgacataatatataaatagtcataaatcgaaataaaattaaagaggctcgtca 52753786  T
Q  214 ttttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||| |||||||||||||||| |||||||||||||    
T  52753787 ttttgttgataaaagtacaatttaaaataagagagat 52753823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 138 - 250
Target Start/End: Complemental strand, 22892106 - 22891994
Alignment:
Q  138 ggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttg 237  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||| |||||||| ||||| || |||||||| ||||||||||||||||||||||||     
T  22892106 ggcaaaattttgacctcaaattcacatgtgccacaatatataaatagacataaatcaaaatataataggctcgttattttgtcgataaaagtacaattta 22892007  T
Q  238 aaataagagagat 250  Q
    |||||||||||||    
T  22892006 aaataagagagat 22891994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 26272817 - 26272929
Alignment:
Q  135 atgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaat 234  Q
    ||||||||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||| | |||||||||||    
T  26272817 atgggcaaatttttaaccgcaaatttacatgtgacatgatatataaatagtcataaatcgaaataaaaaaggttcgtctttttgtcaacaaaagtacaat 26272916  T
Q  235 ttgaaataagaga 247  Q
    |||||||||||||    
T  26272917 ttgaaataagaga 26272929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 114 - 250
Target Start/End: Complemental strand, 14499206 - 14499069
Alignment:
Q  114 gagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatat-aaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    |||| |||||||||||| ||  | || |||| ||||| |||||||||||||| |||||||||||| |||||||| ||||| | |||||||||||||| ||    
T  14499206 gagctaggaattttatcgagcctaggaaaaaatttgatcgcaaattcacatgcgacataatatattaaatagtcttaaattgtaataaaagaggctcatc 14499107  T
Q  213 attttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  14499106 attttatcgataaaagtacaatttgaaataagagagat 14499069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 250
Target Start/End: Complemental strand, 9637424 - 9637293
Alignment:
Q  122 aattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcg 221  Q
    ||||| ||| ||| || ||||||||||||||  ||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||| |||||||||    
T  9637424 aatttcatcgagtctgcgcaaaattttgaccctaaattcatatgtgacataatatataaataataataaatcgaaataaaagagactcgttattttgtcg 9637325  T
Q  222 ataaa---agtacaatttgaaataagagagat 250  Q
    |||||   |||||||||| ||| |||||||||    
T  9637324 ataaaattagtacaatttaaaacaagagagat 9637293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 248
Target Start/End: Original strand, 32379751 - 32379857
Alignment:
Q  141 aaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaa 240  Q
    |||| ||||| ||||||||||||||||||||  |||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||||||| |||    
T  32379751 aaaaatttgaacgcaaattcacatgtgacatgttatataaataatcataaatcgaaataaaagagactcgtcattttgtcaat-aaattacaatttaaaa 32379849  T
Q  241 taagagag 248  Q
    ||||||||    
T  32379850 taagagag 32379857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 15209316 - 15209417
Alignment:
Q  139 gcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttga 238  Q
    |||||| ||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || |||||||||| | ||||||||||||| |    
T  15209316 gcaaaaattttaacgcaaattcacatgtgacataatatataaa--gtcataaatcgaaataaaagaggttcatcattttgtcaacaaaagtacaatttaa 15209413  T
Q  239 aata 242  Q
    ||||    
T  15209414 aata 15209417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 35948885 - 35948981
Alignment:
Q  155 aaattcacatgtgacataatatataa--atagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||||||||||| |||||||||| || |||| |||||| ||||||||| |||||||    
T  35948885 aaattcacatgtgacataatatataataatagtcataaatcaaaataaaagaggatcgtcatttt-tctataatagtacagtttgaaatacgagagat 35948981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 49465384 - 49465494
Alignment:
Q  121 gaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtc 220  Q
    |||||||||| ||  |||||||| |||| |||||||||||||||| ||||||||||||||||||||          |||||||||||||| |||||||||    
T  49465384 gaattttatcgagcctgggcaaagttttaaccgcaaattcacatgcgacataatatataaatagtc----------ataaaagaggctcgacattttgtc 49465473  T
Q  221 gataaaagtacaatttgaaat 241  Q
    ||||||||| |||||||||||    
T  49465474 gataaaagttcaatttgaaat 49465494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 41753222 - 41753124
Alignment:
Q  154 caaattcacatgtgacataatatata--aatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||| |||||||||||||||||  |||||||| |||||||||||||||||| || |||||||  | | |||| ||||||||||||||||||||||    
T  41753222 caaattcatatgtgacataatatatataaatagtcagaaatcgaaataaaagaggttcatcatttttacaacaaaaatacaatttgaaataagagagat 41753124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 41971294 - 41971384
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||||||||||||||| |||||||| || |||||||||||| || || ||||| | | ||||||||||||| |||||    
T  41971294 cgcaaattcacatgtgacataatatataaacagtcataactcaaaataaaagaggttcctcgttttgacaacaaaagtacaatttaaaata 41971384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 17875023 - 17874950
Alignment:
Q  177 ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||| |||| | |||||||||| || | ||||||||||||| |||||||||||||    
T  17875023 ataaatagtcataaatcgaaatagaagaagttcgtcattttatcaacaaaagtacaatttaaaataagagagat 17874950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 32981053 - 32981098
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaataa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32981053 aaattcacatgtgacataatatataaatagtcataaatcgaaataa 32981098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 33490506 - 33490457
Alignment:
Q  153 gcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaa 202  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33490506 gcaaattcacatgcgacataatatataaatagtcataaatcgaaataaaa 33490457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 170357 - 170413
Alignment:
Q  152 cgcaaattcacatgtgacataatat--ataaatagtcataaatcgaaataaaagagg 206  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  170357 cgcaaatttacatgtgacataatatatataaatagtcataaatcgaaataaaagagg 170413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 32885872 - 32885972
Alignment:
Q  152 cgcaaattcacatgtgacataatat--ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagaga 249  Q
    |||||||||||||||||||||||||  ||||||| ||||||||| || ||||||||| | |||||||  || | | ||||||| ||| ||||||||||||    
T  32885872 cgcaaattcacatgtgacataatatatataaataatcataaatcaaattaaaagaggattgtcatttattctacataagtacactttaaaataagagaga 32885971  T
Q  250 t 250  Q
    |    
T  32885972 t 32885972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 320714 - 320762
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataa 200  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  320714 cgcaaattcacatgtgacataatatataatcagtcataaatcgaaataa 320762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 11843800 - 11843902
Alignment:
Q  152 cgcaaattcacatgtgacataatatata--aatagtcataaatcgaaataaaagaggctcgtcattttgtcg--ataaaagtacaatttgaaataagaga 247  Q
    ||||||||| ||||| ||||||||||||  ||||||||||||| ||||||||| ||| |||||||||| |    | |||||||||||||||||||||| |    
T  11843800 cgcaaattcgcatgtaacataatatatataaatagtcataaattgaaataaaaaaggttcgtcatttttttttaacaaaagtacaatttgaaataagata 11843899  T
Q  248 gat 250  Q
    |||    
T  11843900 gat 11843902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 17446459 - 17446416
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| || |||||||||||||    
T  17446459 cgcaaattcacatgtgacataatatatcaacagtcataaatcga 17446416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 42309947 - 42309994
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaataaaa 202  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  42309947 aaattcacatgtgacataatatataaacagtcataaattgaaagaaaa 42309994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 250
Target Start/End: Complemental strand, 51053284 - 51053141
Alignment:
Q  109 tggtggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatata--aatagtcataaatcgaaataaaagagg 206  Q
    ||||||||| |  |||||||| || | || ||||| |||| | || |||||||||| ||||||||||||||  || ||| |||||||||||||||| ||     
T  51053284 tggtggagccaaaaattttataaaatttgagcaaattttttatcgtaaattcacatatgacataatatatataaaaagttataaatcgaaataaaaaaga 51053185  T
Q  207 ctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
     || | ||||| || | |||| |||||||| |||||| ||||||    
T  51053184 ttcattattttatcaacaaaaatacaatttaaaataaaagagat 51053141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 7434572 - 7434531
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaa 196  Q
    |||||||||||||| |||||||||||| | ||||||||||||    
T  7434572 aaattcacatgtgatataatatataaacaatcataaatcgaa 7434531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 11957434 - 11957487
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  11957434 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 11957487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 17875614 - 17875557
Alignment:
Q  122 aattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatata 179  Q
    ||||||||  ||| |||||||||  || | ||||||||||||||||||||||||||||    
T  17875614 aattttatagagtctgggcaaaaaatttatcgcaaattcacatgtgacataatatata 17875557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 23314085 - 23314032
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  23314085 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 23314032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 35908647 - 35908594
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| |||||| |||||||| |||||    
T  35908647 aaatcgaaataaaagaggtttatcattttgtcaataaaaatacaatttaaaata 35908594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 23314161 - 23314117
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    |||||||||||| | || ||||||||| |||||||||||||||||    
T  23314161 aaattcacatgtaatattatatataaacagtcataaatcgaaata 23314117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 113 - 250
Target Start/End: Original strand, 13152260 - 13152397
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| |||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||| ||||| |||    
T  13152260 ggagctaggaattttatcgagtctgggcaaaattttgatcgcaaattcacatgcgacataatatataaataatcataaattgaaataaaataggcttgtc 13152359  T
Q  213 attttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  13152360 attttgtcgataaaactacaatttgaaataagagagat 13152397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 121 - 250
Target Start/End: Complemental strand, 9256690 - 9256561
Alignment:
Q  121 gaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtc 220  Q
    |||||||||| ||| |||  |||||||||| ||||||||||| || ||||||||||||||||||||||||||  ||||| |||||||||||||||||||     
T  9256690 gaattttatcgagtctggataaaattttgatcgcaaattcacgtgcgacataatatataaatagtcataaattaaaatacaagaggctcgtcattttgtt 9256591  T
Q  221 gataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||||||    
T  9256590 gataaaagtacaatttgaaataagagagat 9256561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 10468032 - 10467923
Alignment:
Q  141 aaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaa 240  Q
    |||||||| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  10468032 aaaattttaaccacaaattcacatgcgaaataatatataaatagtcataaatcgaaataaaagaggctcgtcattttattgataaaagtacaatttgaaa 10467933  T
Q  241 taagagagat 250  Q
    ||||||||||    
T  10467932 taagagagat 10467923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 104 - 250
Target Start/End: Complemental strand, 28846923 - 28846777
Alignment:
Q  104 atcattggtggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaag 203  Q
    |||| ||||||||  | |||||||||  ||| || |||||||||| |||  |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28846923 atcagtggtggagtcaagaattttatagagtttgtgcaaaattttaaccataaattcacatgtgatataatatataaatagtcataaatcgaaataaaag 28846824  T
Q  204 aggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||  |||||||||| || |||||||||||||||||||||||||||||    
T  28846823 agattcgtcattttatcaataaaagtacaatttgaaataagagagat 28846777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 42447206 - 42447107
Alignment:
Q  140 caaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaa 239  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||    
T  42447206 caaaattttgatcgcaaattcacatgtgacataatatataaacagtcataaatcgaaataaaagagactcgtcattttgtcaataatagtacaatttgaa 42447107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 104 - 250
Target Start/End: Original strand, 24592194 - 24592340
Alignment:
Q  104 atcattggtggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaag 203  Q
    |||| ||| ||||| |||||||||||  ||  || |||||||||| |||| ||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  24592194 atcagtggcggagccaggaattttatagagcctgagcaaaattttaaccgtaaattcacatgtgacataacatataattagtcataaatcgagataaaag 24592293  T
Q  204 aggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    || |||||||||||||| ||| ||| |||||||||||||||||||||    
T  24592294 agactcgtcattttgtcaatagaagaacaatttgaaataagagagat 24592340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 40145899 - 40146013
Alignment:
Q  136 tgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatt 235  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||| | ||    
T  40145899 tgggcaaaattttgaccgcaaatttatatgtgacataatatataaataatcataaatcgaaatagaagaagctcgtcattttgtcaataaaagtatagtt 40145998  T
Q  236 tgaaataagagagat 250  Q
    | |||||||||||||    
T  40145999 taaaataagagagat 40146013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 24333985 - 24333889
Alignment:
Q  154 caaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||| |||||| | |||||||||||||||||||||||||||    
T  24333985 caaattcacatgtgatataatatataaatagtcataaatcgaaataaaataggcacatcaatttgtcaacaaaagtacaatttgaaataagagagat 24333889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 2826196 - 2826306
Alignment:
Q  137 gggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaattt 236  Q
    |||||||||||| ||| |||||| ||||   |||||||||||||||||||||||||| |||||||| ||| | |||||||| || |||||||||||||||    
T  2826196 gggcaaaattttaaccacaaatttacatagaacataatatataaatagtcataaatcaaaataaaataggtttgtcattttatcaataaaagtacaattt 2826295  T
Q  237 gaaataagaga 247  Q
    |||||||||||    
T  2826296 gaaataagaga 2826306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 21958823 - 21958684
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatata--aatagtcataaatcgaaataaaagaggctcg 210  Q
    ||||| |||||||||||  ||  |||||||||  || | |||||||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||     
T  21958823 ggagctaggaattttatagagcttgggcaaaaagtttatcgcaaattcatatgtgacataatatatataaatagtcataaatcgaaataaaagaggttct 21958724  T
Q  211 tcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||| || | ||||||||||||| |||||||| ||||    
T  21958723 tcattttttcaacaaaagtacaattttaaataagaaagat 21958684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 40469891 - 40469996
Alignment:
Q  137 gggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaattt 236  Q
    ||||||||| || | || ||||||||||| || |||||||||||| |||||||||||||||||||||||| || |||||||||| | |||||||||||||    
T  40469891 gggcaaaatatttatcgtaaattcacatgcgatataatatataaacagtcataaatcgaaataaaagaggttcctcattttgtcaacaaaagtacaattt 40469990  T
Q  237 gaaata 242  Q
     |||||    
T  40469991 aaaata 40469996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 3436363 - 3436272
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcg-aaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||| || |||||||||| | ||||||||||||| |||||    
T  3436363 cgcaaattcacatgtgacataatatataaacagtcataaatcgaaaataaaataggttcctcattttgtcaacaaaagtacaatttaaaata 3436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 27191051 - 27190943
Alignment:
Q  141 aaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaa 240  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||||||||  |||||||| | |||||| |||||||    |||| ||||||||||||    
T  27191051 aaaattttaacc-caaattcacatatgacataatatataaatagtcataaattaaaataaaaaatgctcgttattttgttagcaaaaatacaatttgaaa 27190953  T
Q  241 taagagagat 250  Q
    ||||||||||    
T  27190952 taagagagat 27190943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 250
Target Start/End: Complemental strand, 32343059 - 32342988
Alignment:
Q  179 aaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||||   | ||||||||| | |||| ||||||||||||||||||||||    
T  32343059 aaatagtcataaatcgaaataaaagaggtatgccattttgtcaacaaaactacaatttgaaataagagagat 32342988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 250
Target Start/End: Complemental strand, 32355546 - 32355475
Alignment:
Q  179 aaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||||   | ||||||||| | |||| ||||||||||||||||||||||    
T  32355546 aaatagtcataaatcgaaataaaagaggtatgccattttgtcaacaaaactacaatttgaaataagagagat 32355475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 250
Target Start/End: Complemental strand, 32359665 - 32359594
Alignment:
Q  179 aaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||||   | ||||||||| | |||| ||||||||||||||||||||||    
T  32359665 aaatagtcataaatcgaaataaaagaggtatgccattttgtcaacaaaactacaatttgaaataagagagat 32359594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 33754039 - 33754121
Alignment:
Q  20 ctatttttcatggcttgaaatccttcataactattttcaagagctcatgttacaaccttttaactcaatttctgtccgatcaag 103  Q
    ||||||||| ||||||||||||||||||||| | |||||||||||  || ||||||| ||||||||||||| |||| |||||||    
T  33754039 ctatttttcttggcttgaaatccttcataaccactttcaagagcttctgctacaacc-tttaactcaatttatgtctgatcaag 33754121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 32372196 - 32372128
Alignment:
Q  179 aaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagaga 247  Q
    ||||||||||||||||||||| ||||||   ||||||||||| | |||| |||||||||||||||||||    
T  32372196 aaatagtcataaatcgaaatataagaggtatgtcattttgtcaacaaaactacaatttgaaataagaga 32372128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 10396374 - 10396451
Alignment:
Q  173 atatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||| ||||||||| |||||||||||||| | |||| ||||  || | ||||||||||||| |||||||||||||    
T  10396374 atatatatatagtcatatatcgaaataaaagaagttcgttatttcttcaacaaaagtacaatttaaaataagagagat 10396451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 24019404 - 24019444
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  24019404 aaattcacatgtgatataatatataaatagtcataaatcga 24019444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 27046973 - 27046929
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaa 196  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||    
T  27046973 cgcaaatttacatgtgacataatatataaacagtcataaatcgaa 27046929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 28524352 - 28524312
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  28524352 aaattcacatgtgacataatatataaacagtcataaatcga 28524312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 29727394 - 29727434
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  29727394 aaattcacatgtgacataatatataaacagtcataaatcga 29727434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 39915668 - 39915628
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  39915668 aaattcacatgtgatataatatataaatagtcataaatcga 39915628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 14447111 - 14447020
Alignment:
Q  138 ggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagt 229  Q
    |||||||||||  ||  |||||||  | ||| |||||||||||||||||||||||  |||||||||| | ||||| ||||||| ||||||||    
T  14447111 ggcaaaattttatccataaattcatgtatgatataatatataaatagtcataaattaaaataaaagatgttcgtcgttttgtcaataaaagt 14447020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 23403227 - 23403188
Alignment:
Q  154 caaattcacatgtgacataatatataaatagtcataaatc 193  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  23403227 caaattcacatgtgacataatatatcaatagtcataaatc 23403188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 34228109 - 34228152
Alignment:
Q  140 caaaattttgaccgcaaattcacatgtgacataatatataaata 183  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  34228109 caaaattttaaccgcaaattcacatgtgaaataatatataaata 34228152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 4405099 - 4405043
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataaga 245  Q
    |||| ||||||||||||| |  |||||||||| ||||||||||||||| ||||||||    
T  4405099 aaattgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataaga 4405043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 15839441 - 15839397
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    ||||||| ||||||||||||||||||| |||||| ||||||||||    
T  15839441 aaattcaaatgtgacataatatataaacagtcatgaatcgaaata 15839397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 29632542 - 29632502
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  29632542 aaattcacatgtgatataatatataaacagtcataaatcga 29632502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 34228174 - 34228214
Alignment:
Q  170 ataatatataaatagtcataaatcgaaataaaagaggctcg 210  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  34228174 ataatatataaatagttataagtcgaaataaaagaggctcg 34228214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 16532563 - 16532634
Alignment:
Q  176 tataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagaga 247  Q
    |||||| ||||||||||| |||||||| ||| ||||| |||| |  | |||| |||||||||||||||||||    
T  16532563 tataaacagtcataaatcaaaataaaaaaggttcgtcgtttttttaacaaaaatacaatttgaaataagaga 16532634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 16787101 - 16787154
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  ||| |||||| ||||||||||||||| |||||    
T  16787101 aaatcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaata 16787154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 34135881 - 34135934
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||| | |  |||||||||| ||||||||||||||| |||||    
T  34135881 aaatcgaaataaaagatgtttatcattttgtcaataaaagtacaatttaaaata 34135934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 34845177 - 34845136
Alignment:
Q  173 atatataaatagtcataaatcgaaataaaagaggctcgtcat 214  Q
    ||||||||||||||||||||| |||||||| ||| |||||||    
T  34845177 atatataaatagtcataaatcaaaataaaaaaggatcgtcat 34845136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 36409575 - 36409522
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  36409575 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 36409522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 113 - 250
Target Start/End: Original strand, 22712766 - 22712902
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| |||||||||||| ||| ||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  22712766 ggagctaggaattttatcgagtttggacaaaattttgaccgcaagtttacatgtgacatgatatataaatagtcataaattgaaat-aaagaggctcgtc 22712864  T
Q  213 attttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22712865 attttgtcgataaaagtacaatttgaaataagagagat 22712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 1280862 - 1280756
Alignment:
Q  141 aaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaa 240  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| |||    
T  1280862 aaaattttaaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtaattttgtcaacaaaagtacaatttaaaa 1280763  T
Q  241 taagaga 247  Q
    |||||||    
T  1280762 taagaga 1280756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 113 - 247
Target Start/End: Complemental strand, 3055791 - 3055657
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| |||||||||||| ||  ||| ||||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||||| || |||    
T  3055791 ggagctaggaattttatcgagcttggacaaaattttgatcgcaaattcacatgctatataatatataaatagtcataaatcgaaataaaagagacttgtc 3055692  T
Q  213 attttgtcgataaaagtacaatttgaaataagaga 247  Q
    |||||||||||||||||||||||| ||||||||||    
T  3055691 attttgtcgataaaagtacaatttaaaataagaga 3055657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 27168692 - 27168806
Alignment:
Q  136 tgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatt 235  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||| || ||||||||| ||||    
T  27168692 tgggcaaaattttgattgcaaattcacatttgacataatatataaatagtcataaatcgaaataatagagactcgtcattttatccataaaagtataatt 27168791  T
Q  236 tgaaataagagagat 250  Q
    |||||||||||||||    
T  27168792 tgaaataagagagat 27168806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 23244475 - 23244573
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||| ||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  23244475 cgcaaatttacatgcgacataatatataaatagccataaattgaaataaaagaggctcgtcattttgccaataaaagtacaatttgaaataagagagat 23244573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 15730865 - 15730978
Alignment:
Q  139 gcaaaattttgaccgcaaattcacatgtgacataatatataaatagtc--ataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaattt 236  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||   ||| |||||||| ||| ||||||||||||||| | |||||||||||||||    
T  15730865 gcaaaattttgaatgcaaattcacatgtgacataatatataaatagtgttatacatcgaaatcaaataggctcgtcattttgacaataaaagtacaattt 15730964  T
Q  237 gaaataagagagat 250  Q
    ||||||||||||||    
T  15730965 gaaataagagagat 15730978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 250
Target Start/End: Complemental strand, 8786079 - 8785954
Alignment:
Q  122 aattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcg 221  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||| |||||||||||||| |   |||||||  |||||||||||| | ||||||||||||    
T  8786079 aattttattgagtttgggcaaaattttaaccgcaaattcacatgggacataatatataatt---cataaattaaaataaaagaggtttgtcattttgtcg 8785983  T
Q  222 ataaaagtacaatttgaaataagagagat 250  Q
    |||||| ||||||| ||||||||||||||    
T  8785982 ataaaactacaattggaaataagagagat 8785954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 204119 - 204022
Alignment:
Q  155 aaattcacatgtgacataatatataa--atagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||||||||||  |||||||||| || | ||||||||| |||||||||||||||||    
T  204119 aaattcacatgtgacataatatataataatagtcataaatcaaaataaaagagaatcgtcattttttctacaaaagtacagtttgaaataagagagat 204022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 28802003 - 28801913
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| || |||||||||| | ||||||||||||| |||||    
T  28802003 cgcaaattcacatgcgacataatatataaacagtcataaattgaaataaaagaggttcctcattttgtcaacaaaagtacaatttaaaata 28801913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 13819130 - 13819086
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  13819130 aaattcacatgtgacataatatataaacagtcataaatcgaaata 13819086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 1775380 - 1775423
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaat 198  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  1775380 aaattcacatgtgacataatatataaacagtcataaatcgaaat 1775423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 192899 - 192847
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaaga 204  Q
    ||||||||||||||| |||||||||||||| | ||||||||| ||||||||||    
T  192899 cgcaaattcacatgtaacataatatataaacaatcataaatcaaaataaaaga 192847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 26282330 - 26282370
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  26282330 aaattcacatgtgacataatatataaacagtcataaatcga 26282370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 36292622 - 36292662
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  36292622 aaattcacatgtgacataatatataaacagtcataaatcga 36292662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 39656532 - 39656576
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    |||||||||||||| |||||||||||| |||||||||||||||||    
T  39656532 aaattcacatgtgatataatatataaacagtcataaatcgaaata 39656576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 22542114 - 22542059
Alignment:
Q  194 gaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagaga 249  Q
    ||||||||||||| |||| ||||| || | ||||||||||||||||||||||||||    
T  22542114 gaaataaaagaggttcgttattttttcaacaaaagtacaatttgaaataagagaga 22542059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 11852937 - 11852887
Alignment:
Q  200 aaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||||| |||||||||| || ||||||||||| ||||||||||||||    
T  11852937 aaagaggctcatcattttgtcaatgaaagtacaattcgaaataagagagat 11852887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 2229164 - 2229087
Alignment:
Q  173 atatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||| ||||||| ||| | |||||||  ||| |||||||||| || | ||||||| |||||||||||||||||||    
T  2229164 atatatatatagtcaaaaaccaaaataaattaggttcgtcattttttcaacaaaagtataatttgaaataagagagat 2229087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 16156061 - 16156017
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    ||||||||||||||||||||||||||| | ||| |||||||||||    
T  16156061 aaattcacatgtgacataatatataaacaatcacaaatcgaaata 16156017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 19986611 - 19986567
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    |||||||||  |||||||||||||||| |||||||||||||||||    
T  19986611 aaattcacacttgacataatatataaacagtcataaatcgaaata 19986567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 12098052 - 12098091
Alignment:
Q  140 caaaattttgaccgcaaattcacatgtgacataatatata 179  Q
    ||||||||| |||| |||||||||||||||||||||||||    
T  12098052 caaaattttaaccgtaaattcacatgtgacataatatata 12098091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 31500721 - 31500763
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcg 194  Q
    ||||||||||||||||||||| ||||| || ||||||||||||    
T  31500721 cgcaaattcacatgtgacatagtatatcaacagtcataaatcg 31500763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 39435866 - 39435828
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatc 193  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  39435866 aaattcacatgtgaaataatatataaacagtcataaatc 39435828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 10036998 - 10036945
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  10036998 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 10036945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 10037066 - 10037029
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaat 192  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  10037066 aaattcacatgtgatataatatataaacagtcataaat 10037029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 12277931 - 12277984
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||| ||||||||||||| |  |||||||||| ||||||||||||||| |||||    
T  12277931 aaattgaaataaaagaggattatcattttgtcaataaaagtacaatttaaaata 12277984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 13819068 - 13819015
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  13819068 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 13819015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 16155982 - 16155929
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  16155982 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 16155929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 17331072 - 17331125
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    ||||| |||||||||||| |  |||||||||| ||||||||||||||| |||||    
T  17331072 aaatcaaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaata 17331125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 37255723 - 37255670
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| |||||| |||||||| |||||    
T  37255723 aaatcgaaataaaagaggtttatcattttgtcaataaaaatacaatttaaaata 37255670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 16332917 - 16332957
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    |||||||||||| | |||||||||||| |||||||||||||    
T  16332917 aaattcacatgtaatataatatataaacagtcataaatcga 16332957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 24988675 - 24988816
Alignment:
Q  109 tggtggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggct 208  Q
    ||||||||  || ||||||||  ||| |||| |||||||||||| ||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||    
T  24988675 tggtggagtcagaaattttatagagtgtgggtaaaattttgaccacaaattcacatgtgacataatttataaataatcataaatcaaaataaaagagact 24988774  T
Q  209 cgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  24988775 cgtcattttgtcaataaaagtacaatttgaaataagagagat 24988816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 9743577 - 9743440
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| |||||||||||  ||| ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||| |  ||||||    
T  9743577 ggagccaggaattttatatagtctgggcaaaattttgaccgcaaattcacatgttacattgtatataaatagtcataaatcgaaatcaaataaactcgtc 9743478  T
Q  213 attttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  9743477 attttgtcaataaaagtacaaattgaaataagagagat 9743440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 3856761 - 3856860
Alignment:
Q  141 aaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaa 240  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||  ||| |||||||||||||||||||||||||||||||||    
T  3856761 aaaattttcaccgcaaattcacatgtgacataatatataaatagttataaatcaaaataaagtaggttcgtcattttgtcgataaaagtacaatttgaaa 3856860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 15668231 - 15668117
Alignment:
Q  136 tgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatt 235  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| |||||||| |||||| |||||||    
T  15668231 tgggcgaaattttcaccgtaaattcacatgtgacataatatataaatagtcatatagcaaaataaaagaggctcgttattttgtcaataaaattacaatt 15668132  T
Q  236 tgaaataagagagat 250  Q
    | |||||||||||||    
T  15668131 taaaataagagagat 15668117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 43137408 - 43137301
Alignment:
Q  140 caaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaa 239  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| || | |||| |||||||| ||    
T  43137408 caaaattttaaccgcaaattcacatgtgacataatatatgaatagtcataaatcgaaataaaagaggtttgtcattttttcaacaaaaatacaatttaaa 43137309  T
Q  240 ataagaga 247  Q
    ||||||||    
T  43137308 ataagaga 43137301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 50091576 - 50091439
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| |||||||||||| ||| || ||||| |||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||    
T  50091576 ggagctaggaattttatcgagtctgagcaaactttttatcgcaaattcacttgcgacataatatataaatagtcataaatcaaaataaaagaggttcgtc 50091477  T
Q  213 attttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||   |||||||||||| ||| ||||||| ||||    
T  50091476 attttgctaataaaagtacaacttggaataagatagat 50091439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 37381757 - 37381869
Alignment:
Q  136 tgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagt-cataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaat 234  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||| |||||| | |||||||| ||    
T  37381757 tgggcaaaattttaaccgaaaattcacatgtgatataatatataaatagttcataaatcgaaataaaagaggttcgtcactttgtcaacaaaagtacgat 37381856  T
Q  235 ttgaaataagaga 247  Q
    || ||||||||||    
T  37381857 ttaaaataagaga 37381869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 51262278 - 51262154
Alignment:
Q  122 aattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcg 221  Q
    ||||||||  ||||| || |||||||| ||||  |||||||||||||||||||||||||||| | |||| ||||||||| ||| | |||||||||||||     
T  51262278 aattttatagagtataggtaaaattttaaccgtgaattcacatgtgacataatatataaataattataa-tcgaaataagagatgatcgtcattttgtca 51262180  T
Q  222 ataaaagtacaatttgaaataagaga 247  Q
    ||||||||||||||| ||||||||||    
T  51262179 ataaaagtacaatttaaaataagaga 51262154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 17073854 - 17073949
Alignment:
Q  109 tggtggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaaga 204  Q
    |||||||||  | ||||||||  || |||||| |||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  17073854 tggtggagcctgaaattttatagagcatgggccaaattttgactgcaaattcatatgtgacataatatataaatagtcaaaaatcgaaataaaaga 17073949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 51408512 - 51408612
Alignment:
Q  152 cgcaaattcacatgtgacataatat--ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagaga 249  Q
    |||||||||| ||||||||||||||  ||||||||||||||||| |||||||| | | |||||||||| || | |||||||||||||||||||||| |||    
T  51408512 cgcaaattcatatgtgacataatatatataaatagtcataaatcaaaataaaaaaagttcgtcattttttcaacaaaagtacaatttgaaataagaaaga 51408611  T
Q  250 t 250  Q
    |    
T  51408612 t 51408612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 42269130 - 42269234
Alignment:
Q  139 gcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttga 238  Q
    |||||||||| |||| ||||| | ||||||||||||||||||||| | |||||| ||||||||||||  | ||||||||||  | ||||||| |||||||    
T  42269130 gcaaaattttaaccgtaaatttatatgtgacataatatataaataattataaattgaaataaaagagatttgtcattttgtaaacaaaagtataatttga 42269229  T
Q  239 aataa 243  Q
    |||||    
T  42269230 aataa 42269234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 1185554 - 1185638
Alignment:
Q  158 ttcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| || | |||||||| | ||||||  ||||| |||||    
T  1185554 ttcacatgtgacataatatataaacagtcataaatcaaaataaaagaggttccttattttgtcaacaaaagtgaaatttaaaata 1185638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 31989291 - 31989201
Alignment:
Q  162 catgtgacataatatata--aatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||| |||||| ||| || | |||||||||| || |||||||| ||||    
T  31989291 catgtgacataatatatataaataatcataaatcgaaataaaagaggttcgtcactttttcaacaaaagtacaacttaaaataagaaagat 31989201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 53710660 - 53710570
Alignment:
Q  162 catgtgacataatatata--aatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||| | |||||||||| || | |||||||||| || |||||||| ||||    
T  53710660 catgtgatataatatatacaaatagtcataaatcgaaataaaagaagttcgtcattttttcaacaaaagtacaacttaaaataagaaagat 53710570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 5136419 - 5136331
Alignment:
Q  153 gcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    ||||||||||||||||| ||||||||||| ||||||||||  |||||||||||| || ||| |||||| | |||| |||||||| |||||    
T  5136419 gcaaattcacatgtgacgtaatatataaacagtcataaattaaaataaaagaggttc-tcagtttgtcaacaaaaatacaatttaaaata 5136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 22485915 - 22485958
Alignment:
Q  207 ctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  22485915 ctcgtcattttgtcgataaaagtacaatttaaaataagagagat 22485958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 5341080 - 5341145
Alignment:
Q  181 atagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagag 246  Q
    ||||||||| |||| || |||| || ||||| |||||||||||||||||||||||| |||||||||    
T  5341080 atagtcatagatcggaaaaaaaaagactcgttattttgtcgataaaagtacaatttaaaataagag 5341145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 22934729 - 22934802
Alignment:
Q  177 ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    |||||| ||||||||||||||||||||||   | | |||||||| | |||||||||||||||||||| ||||||    
T  22934729 ataaatggtcataaatcgaaataaaagagatccatgattttgtcaacaaaagtacaatttgaaataacagagat 22934802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 40080758 - 40080798
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  40080758 aaattcacatgtgacataatatataaataatcataaatcga 40080798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 42964793 - 42964841
Alignment:
Q  142 aaattttgaccgcaaattcacatgtgacataatatataaatagtcataa 190  Q
    ||||||| |||| |||||||||||||||||||||||||||| |||||||    
T  42964793 aaattttaaccgtaaattcacatgtgacataatatataaattgtcataa 42964841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 34083124 - 34083171
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaataaaa 202  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  34083124 aaattcacatgtgacataatatataaacagtcataaatcaaaaaaaaa 34083171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 39772946 - 39772906
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  39772946 aaattcacatgtgacataatatataaacaatcataaatcga 39772906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 24130397 - 24130435
Alignment:
Q  141 aaaattttgaccgcaaattcacatgtgacataatatata 179  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  24130397 aaaaatttgaccgtaaattcacatgtgacataatatata 24130435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 27936307 - 27936261
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaat 198  Q
    ||||||||||||||||| |||||||||||| | ||||||||| ||||    
T  27936307 cgcaaattcacatgtgagataatatataaacaatcataaatccaaat 27936261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 11017346 - 11017399
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  ||| |||||| ||||||||||||||| |||||    
T  11017346 aaatcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaata 11017399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 35515122 - 35515034
Alignment:
Q  154 caaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    ||||||||| | |||||||||||||||| | |||||| | ||||||||| ||| |  ||||||| || | |||| |||||||| |||||    
T  35515122 caaattcacttatgacataatatataaacaatcataagttgaaataaaaaaggtttatcattttatcaacaaaaatacaatttaaaata 35515034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 31393104 - 31392968
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtc 212  Q
    ||||| |||||||| ||| ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  31393104 ggagctaggaatttcatcgagtctgggtaaaattttgaccgtaaatttacatgtgacataatatataaatagtcataaatcgaattaaaagaggttcgtc 31393005  T
Q  213 attttgtcgataaaagtacaatttgaaataagagagat 250  Q
    | |||||||||||||||||||||| |||||||||||||    
T  31393004 a-tttgtcgataaaagtacaatttaaaataagagagat 31392968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 12539854 - 12539745
Alignment:
Q  141 aaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaa 240  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  12539854 aaaattttgaccgtaaatttatatgtgacataatatataaatagtcatgaatcgaaataaaagaggctcatcattttgtcgataaaagtacaaattgaaa 12539755  T
Q  241 taagagagat 250  Q
    ||||||||||    
T  12539754 taagagagat 12539745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 242
Target Start/End: Original strand, 19951707 - 19951827
Alignment:
Q  122 aattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcg 221  Q
    ||||||||  ||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||     
T  19951707 aattttatagagtctggtcaaaattttaaccgcaaattcacatgtaacataatatataaatagtcataaatcgaaataaacgagactcatcattttgtca 19951806  T
Q  222 ataaaagtacaatttgaaata 242  Q
    | ||||||| |||||||||||    
T  19951807 acaaaagtataatttgaaata 19951827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 45261737 - 45261846
Alignment:
Q  139 gcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttga 238  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||| ||| |||||||||| ||||||  | |||||||    
T  45261737 gcaaaattttaaccgcaaattcacatgtgatataatatataaatagtcataaatctaaataaatgagcctcatcattttgtcaataaaatcataatttga 45261836  T
Q  239 aataagagag 248  Q
    ||||||||||    
T  45261837 aataagagag 45261846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 33453080 - 33453188
Alignment:
Q  139 gcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttga 238  Q
    |||||||||| || | |||||||||||||| |||||||||||||| ||||||||| || ||||| ||| ||||||||||||| | |||||||||||||||    
T  33453080 gcaaaattttaactgtaaattcacatgtgagataatatataaataatcataaatcaaagtaaaataggttcgtcattttgtcaacaaaagtacaatttga 33453179  T
Q  239 aataagaga 247  Q
    |||||||||    
T  33453180 aataagaga 33453188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 26238743 - 26238653
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| || |||||| ||| | ||||||||||||| |||||    
T  26238743 cgcaaattcacatgcgacataatatataaacagtcataaatcgaaataaaagaggttcctcatttcgtcaagaaaagtacaatttaaaata 26238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 7071568 - 7071659
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataa 243  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||||||| || |||||||||| | | ||||||||||| ||||||    
T  7071568 cgcaaattcacatgtgacataatacataaacagtcataagtcaaaataaaagaggttcctcattttgtcaacagaagtacaatttaaaataa 7071659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 26656271 - 26656344
Alignment:
Q  177 ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||||||||||||||||||||||   ||||||||||| | ||||||||||||| |||||||||||||    
T  26656271 ataaatagtcataaatcgaaataaaagaggtatgtcattttgtcaacaaaagtacaatttaaaataagagagat 26656344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 30547228 - 30547148
Alignment:
Q  119 aggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    |||||||||||  ||| |||| |||||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||    
T  30547228 aggaattttattgagtttgggtaaaattttgaccgcaaattcacatgtgatataatacataaatagtcatagatcaaaata 30547148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 18425859 - 18425928
Alignment:
Q  152 cgcaaattcacatgtgacataatat--ataaatagtcataaatcgaaataaaagaggctcgtcattttgt 219  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| || |||||||||    
T  18425859 cgcaaattcacatgtgacataatatatataaatagtcagaaatcgaaataaaagaggttcatcattttgt 18425928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 27925638 - 27925697
Alignment:
Q  140 caaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||| || ||||||    
T  27925638 caaaattttgaccgcaaattcacatgtgacatgatatataaatagttatagattgaaata 27925697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 32126230 - 32126317
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||||||  |  |||||||||| | ||||||||| ||| |||||    
T  32126230 aaattcacatgtgatataaaatataaacagtcataaatcgaaataaaagagatttatcattttgtcaacaaaagtacagtttaaaata 32126317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 242
Target Start/End: Original strand, 4554302 - 4554432
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaa-gaggctcgt 211  Q
    ||||| ||||| |||||  ||| |||||||||  || | || ||||| | ||||||||||||||||||||||||||||||||||||||||  ||| |  |    
T  4554302 ggagctaggaaatttatggagtctgggcaaaaaatttatcgtaaatttagatgtgacataatatataaatagtcataaatcgaaataaaataaggtttct 4554401  T
Q  212 cattttgtcgataaaagtacaatttgaaata 242  Q
    ||||||||| | |||| |||||||| |||||    
T  4554402 cattttgtcaacaaaaatacaatttaaaata 4554432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 1955078 - 1955001
Alignment:
Q  173 atatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||||||| ||| ||||| | |||||||||| |||||||||| || | ||||||||| |||||||||||||||||    
T  1955078 atatataaataatcacaaatcaagataaaagaggttcgtcattttttcaacaaaagtacagtttgaaataagagagat 1955001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 34907831 - 34907754
Alignment:
Q  173 atatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||| ||||| ||||||| |||||||||||| |||| ||||| || | ||||||||| |||||||||||||||||    
T  34907831 atatatatatagtaataaatcaaaataaaagaggatcgttattttttctacaaaagtacattttgaaataagagagat 34907754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 39368540 - 39368464
Alignment:
Q  173 atatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||| ||||||||||| |||||||||||| | |||||||||| || | |||||||||||| ||||||||| ||||    
T  39368540 atatatatatagtcataaaacgaaataaaagatgttcgtcatttt-tcaacaaaagtacaattggaaataagaaagat 39368464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 6402817 - 6402857
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  6402817 aaattcacatgtgacataatatataaacagtcataaatcga 6402857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 17444036 - 17444076
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  17444036 aaattcacatgtgacataatatataaacagtcataaatcga 17444076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 42443139 - 42443095
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    |||||||||||||| |||||||||||| |||||||||||||||||    
T  42443139 aaattcacatgtgatataatatataaacagtcataaatcgaaata 42443095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 45122264 - 45122216
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataa 200  Q
    ||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  45122264 cgcaaattcacatgtgatataatatataaacagtcataaattgaaataa 45122216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 8058350 - 8058397
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaata 199  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||||    
T  8058350 cgcaaattcacatgttacataatatatcaacagtcataaatcgaaata 8058397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 35649532 - 35649607
Alignment:
Q  104 atcattggtggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatata 179  Q
    |||| ||| ||||| || ||||||||  ||| ||||||||| ||| | ||||||||||||||||||||||||||||    
T  35649532 atcaatggcggagccagaaattttatagagtttgggcaaaaatttaatcgcaaattcacatgtgacataatatata 35649607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 17035761 - 17035802
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaa 196  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  17035761 aaattcacatatgacataatatatcaatagtcataaatcgaa 17035802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 17090272 - 17090313
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcgaa 196  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  17090272 aaattcacatatgacataatatatcaatagtcataaatcgaa 17090313  T

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Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 41250637 - 41250674
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaat 192  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  41250637 aaattcacatgtgacataatatataaacagtcataaat 41250674  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 16406277 - 16406240
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaat 192  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  16406277 aaattcacatgtgatataatatataaacagtcataaat 16406240  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 18982635 - 18982582
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  18982635 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 18982582  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 18982694 - 18982657
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaat 192  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  18982694 aaattcacatgcgacataatatataaacagtcataaat 18982657  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 40607999 - 40608064
Alignment:
Q  171 taatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaattt 236  Q
    ||||||||||||| ||||||||  |||||||| ||  |||| ||||| || |||||||||||||||    
T  40607999 taatatataaataatcataaattaaaataaaaaagattcgttattttatcaataaaagtacaattt 40608064  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 42443076 - 42443023
Alignment:
Q  189 aaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    |||||||||||||||||| |  |||||||||| | ||||||||||||| |||||    
T  42443076 aaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata 42443023  T

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Target: scaffold0726 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0726
Description:

Target: scaffold0726; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 1169 - 1055
Alignment:
Q  136 tgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatt 235  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  1169 tgggtaaaattttgaccacaaattcacatgtgacataatttataaataatcacaaatcaaaataaaagagactcgtcattttgtcaataaaagtacaatt 1070  T
Q  236 tgaaataagagagat 250  Q
    |||||||||||||||    
T  1069 tgaaataagagagat 1055  T

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Target: scaffold0198 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 138 - 250
Target Start/End: Complemental strand, 1680 - 1568
Alignment:
Q  138 ggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttg 237  Q
    ||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||    
T  1680 ggcaaaattttgaccgcaaattcgcatacaacataatatataaatagtcataaatcgaaataaaatacgctcgtcattttgtcaataaaagtacaatctg 1581  T
Q  238 aaataagagagat 250  Q
    ||| |||||||||    
T  1580 aaacaagagagat 1568  T

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Target: scaffold0178 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 18040 - 17913
Alignment:
Q  122 aattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaa--agaggctcgtcattttgt 219  Q
    ||||||||| | | ||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||| |||||||  | ||||| ||||||||||    
T  18040 aattttatcgaatctgggcaaaattttgatcgcaaattcacatgtggtgtaatatataaatagtcataaatcaaaataaaatataggcttgtcattttgt 17941  T
Q  220 cgataaaagtacaatttgaaataagaga 247  Q
    ||||||||||||||||||||| ||||||    
T  17940 cgataaaagtacaatttgaaacaagaga 17913  T

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Target: scaffold0019 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 134757 - 134857
Alignment:
Q  152 cgcaaattcacatgtgacataatat--ataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagaga 249  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| |||||||||||| |||||||||| || | ||||||||| ||||||||||||||||    
T  134757 cgcaaattcacatgtgacataatatatataaatagtcatatatcaaaataaaagaggatcgtcattttttctacaaaagtacagtttgaaataagagaga 134856  T
Q  250 t 250  Q
    |    
T  134857 t 134857  T

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Target: scaffold0015 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 250
Target Start/End: Original strand, 214025 - 214164
Alignment:
Q  113 ggagcgaggaattttatcaagtatgggcaaaattttgaccgcaaattcacatgtgacataatat--ataaatagtcataaatcgaaataaaagaggctcg 210  Q
    ||||| |||||||||||  ||  |||||||||  || | |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||     
T  214025 ggagctaggaattttatagagcttgggcaaaaagtttatcgcaaattcatatgtgacataatatatataaatagtcataaatcgaaataaaagaggttct 214124  T
Q  211 tcattttgtcgataaaagtacaatttgaaataagagagat 250  Q
    ||||||| || | ||||||||||||| |||||||| ||||    
T  214125 tcattttttcaacaaaagtacaattttaaataagaaagat 214164  T

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Target: scaffold0002 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 435241 - 435348
Alignment:
Q  139 gcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttga 238  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||| |||||||| |  |||||| |||||||    
T  435241 gcaaaattttaacttcaaattcacatgtgacataatatataaatagttataaatcgaaattaaataggctcgttattttgtc-aacaaagtataatttga 435339  T
Q  239 aataagaga 247  Q
    |||||||||    
T  435340 aataagaga 435348  T

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Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 479467 - 479506
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcg 194  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  479467 aaattcacatgtgatataatatataaacagtcataaatcg 479506  T

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Target: scaffold0170 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 9348 - 9248
Alignment:
Q  152 cgcaaattcacatgtgacataatatata--aatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaataagagaga 249  Q
    |||||||| | |||||||||||||||||  |||||||||||||  |||||||||||| |||||||||| || | |||||||||||||||||||||| |||    
T  9348 cgcaaattgatatgtgacataatatatataaatagtcataaattaaaataaaagaggttcgtcattttttcaacaaaagtacaatttgaaataagaaaga 9249  T
Q  250 t 250  Q
    |    
T  9248 t 9248  T

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Target: scaffold0154 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 32343 - 32253
Alignment:
Q  152 cgcaaattcacatgtgacataatatataaatagtcataaatcgaaataaaagaggctcgtcattttgtcgataaaagtacaatttgaaata 242  Q
    ||||||||||| | |||||||||||||||| | |||||||||||||||||| ||| |  |||||||||| | |||| |||||||| |||||    
T  32343 cgcaaattcacttatgacataatatataaacaatcataaatcgaaataaaaaaggtttatcattttgtcaacaaaaatacaatttaaaata 32253  T

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Target: scaffold0069 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 18724 - 18684
Alignment:
Q  155 aaattcacatgtgacataatatataaatagtcataaatcga 195  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  18724 aaattcacatgtgacataatatataaacagtcataaatcga 18684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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