View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19012_high_19 (Length: 268)
Name: NF19012_high_19
Description: NF19012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19012_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 31471486 - 31471669
Alignment:
| Q |
17 |
aaaatcaagatgctaaagaacataatgaagcnnnnnnngaagtggtgagcatagcttagttggtacggacaattcatactacctttcggagagtttcttc |
116 |
Q |
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| T |
31471486 |
aaaatcaagatactaaagaacataatgaagcaaaaaaagaagtggtgagcatagcttagttggtacggacaattcatactacctttcggagagtttcttc |
31471585 |
T |
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| Q |
117 |
agtggtgagtcgagaaagacgacccacaaaaagggtacaataagggtcgccagtggccttaggatcaccaaatgggtcatctac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31471586 |
agtggtgagtcgagaaagacgacccacaaaaagggtacaataagggtcgccagtggccttaggatcaccaaatgggtcatctac |
31471669 |
T |
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