View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19012_high_28 (Length: 230)
Name: NF19012_high_28
Description: NF19012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19012_high_28 |
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Alignment Details
Target: chr4 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 24892868 - 24892670
Alignment:
| Q |
14 |
atgaacctatgatttgcgatgttccaacgaagaatgaatttttgaaataaaggatgtttgaggtagagcatgaagtgactgctgacaccgccaacattaa |
113 |
Q |
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| T |
24892868 |
atgaacctatgatttgcgatgttccaatgaagaatgaatttttgaaataaaggacgtttgaggtagagcatgaagtgactgctgacactgccaacattaa |
24892769 |
T |
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| Q |
114 |
aatttaaaaatgactgagatactatgttgtgaaaatattttgtctgttagtttgtgttaggttgactgagtcagagactctgatattcaatgtaaacac |
212 |
Q |
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| T |
24892768 |
aatttaaaaatgactgagatgctatgttgtgaaaatattttgtctgtgagtttgtgttaggttgactgagtcagagactctgatattcaatgtaaacac |
24892670 |
T |
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