View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19012_low_35 (Length: 210)
Name: NF19012_low_35
Description: NF19012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19012_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 32169099 - 32169275
Alignment:
| Q |
18 |
atcatctaaagttgtcctgaaagagacactcaaactaaaatatcctaaagcattgaaacctttatcctaccacaaatgctttccaccatcaccatttaag |
117 |
Q |
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| T |
32169099 |
atcatctaaagttgtcctgaaagagacactcaaactaaaatatcctaaagcattgaaacctttatcctaccacaaatgctttccaccatcaccatttaag |
32169198 |
T |
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| Q |
118 |
catattacaaaacatccaaaacttttaggtaccaagaaataattaaaaggcaaattctcggttgcatgcaatggttg |
194 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
32169199 |
catattacaaaacatccaaaacttttaggtaccaagaaataattaaaagacaaattctcggttgcatgcaatggttg |
32169275 |
T |
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