View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19012_low_9 (Length: 409)
Name: NF19012_low_9
Description: NF19012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19012_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 362; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 1 - 392
Target Start/End: Original strand, 2122021 - 2122414
Alignment:
| Q |
1 |
tgatatccttatctttgctttctatatcacttatataattaacatgttagctacatagatctatgcaatacagtaattaaatatcatattacaaaatatc |
100 |
Q |
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||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2122021 |
tgatatcttcatctttgctttctatatcacttatataattaacatgttagctacatagatctatgcaatacagtaattaaatatcatattacaaaatatc |
2122120 |
T |
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| Q |
101 |
aaattcatacgttctttttcctttgtttttggttggttgagaaatcactaccattttttgttgatacatataattagaaaacaagtatatacatatatca |
200 |
Q |
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| T |
2122121 |
aaattcatacgttctttttcctttgtttttggttggttgagaaatcactaccattttttgttgatacatataattagaaaacaagtatatacatatatca |
2122220 |
T |
|
| Q |
201 |
agattaaccgtatagtttaatggcctttatatg-aaatttttatgttcttaaactaaactggaaatatttgagagctgggatatttttgatacactagca |
299 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2122221 |
agattaaccgtatagtttaatggcctttatatgaaaatttttatgttcttaaactaaactggaaatatttgagagctgggatatttttgatacactagca |
2122320 |
T |
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| Q |
300 |
cggatcaccgttgtgggtcacgtaaaaaataaatgggcatggt-gtgtgtccttttcgtagaaggtgaacaaatcagtttcagaccacagaatt |
392 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| |
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| T |
2122321 |
cggatcaccgttgtgggtcacgtaaaaaataaatgggcatggtggtgtgtccttttcttagaaggtgaacaaatcagtttcagaccacataatt |
2122414 |
T |
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