View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19013_low_13 (Length: 341)
Name: NF19013_low_13
Description: NF19013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19013_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 13571651 - 13571339
Alignment:
| Q |
14 |
gaaataaacaacatagatgagattacatctttaatgatttttcaaaagaaggataacaacttaacatttgcctttggcaataaatcattcaaaacctaat |
113 |
Q |
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| T |
13571651 |
gaaataaacaacatggatgagactacatctttaatgatttttcaaaagaagggtaacaacttaatatttgcctttggcaataaatcattcaaaacctgat |
13571552 |
T |
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| Q |
114 |
tttattcaaacaataccttctttatattaaaacaatatcctctttctattaattctattctcattgcatagatactcaaacgtgagaaatatagattaaa |
213 |
Q |
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| T |
13571551 |
tttattcaaacaataccttctttatattaaaacaatatcctctttctattaattctattctcattgcatagatactcaaacgtgagaaatatagattaaa |
13571452 |
T |
|
| Q |
214 |
gtgacaagtgttgtcttaaagaagatgacatatttctttgtcacgtgacatgtcaatgtaacttctacctctttggtaagaattgaagaatgataactct |
313 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13571451 |
gtgacaagtgttgtcttaaagaaggtgacatatttctttgtcacgtgacatgtcaatgtaacttctacctctttggtaagaattgaagaatgataactct |
13571352 |
T |
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| Q |
314 |
tgtaagtggttgt |
326 |
Q |
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| T |
13571351 |
tgtaagtggttgt |
13571339 |
T |
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