View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19013_low_20 (Length: 241)
Name: NF19013_low_20
Description: NF19013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19013_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 40719966 - 40720206
Alignment:
| Q |
1 |
ttaggtaaatgtgtttaagctagcaattttaatattctcagttaaactaagttttaggaacaattactgttttaatttcta--tgatgagaattgacgaa |
98 |
Q |
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| T |
40719966 |
ttagataaatgtgtttaagctagcaatttcaatattatcatttaaactaagttttaggaacaattactgttttaatttctagatgatgagaattgacgaa |
40720065 |
T |
|
| Q |
99 |
tgctattttatttaacaatttcacaattgtccatctagaaatatagctagtgaaatcacttaaataatccactactctttgtcctcttaccattgtgtta |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
40720066 |
tgctattttatttaacaatttcacaattgtccatctagaaatatagctagtgaaatcacttaaataatccactattctttgtcctcttaccattgtgtta |
40720165 |
T |
|
| Q |
199 |
ttccacnnnnnnnctttcaaaaagacaaatgttttatattc |
239 |
Q |
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|||||| |||||||||||||||||||||||||||| |
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| T |
40720166 |
ttccactttttttctttcaaaaagacaaatgttttatattc |
40720206 |
T |
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