View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19013_low_24 (Length: 237)
Name: NF19013_low_24
Description: NF19013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19013_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 4 - 223
Target Start/End: Complemental strand, 40719921 - 40719701
Alignment:
| Q |
4 |
ttatcactttgtttatgaacaaaaa-gaaatgaaaatagtaattaaagactattaacaaaatggtcgttgcttttagcattatttaacaacagtccaaaa |
102 |
Q |
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| T |
40719921 |
ttatcactttgtttatgaacaaaaaagaaaacaaaatagtaattaaagactattaacaaaatggtcgttgcttttagcattatttaacaacagtccaaaa |
40719822 |
T |
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| Q |
103 |
taagtgatggtctaattgatgtttcttttaagttgatgataaagaattgaaacatgcatcttttgatgtttataagatgcttcgttgatactatatgtgg |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40719821 |
taagtgatggtctaattgatgtttcttttaagttgatgataaagaattgaaacatgcatcttttgatgtttataagatgcttcgttgatactatatgtgg |
40719722 |
T |
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| Q |
203 |
tcaaaatacatcacctctttg |
223 |
Q |
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||||||||||||||||||||| |
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| T |
40719721 |
tcaaaatacatcacctctttg |
40719701 |
T |
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