View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19014_low_4 (Length: 285)
Name: NF19014_low_4
Description: NF19014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19014_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 39909657 - 39909440
Alignment:
| Q |
25 |
aagtccatattagatggacccaaatattatgtacttaggagtagaattttaagattcaacttttattttcgaacaattggcggtcaactcagaagcatat |
124 |
Q |
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| T |
39909657 |
aagtccatattagatggacccaaaaattatgtacttaggagtagaattttaagattcaacttttattttcgaacaattggtggtcaactcagaagcatat |
39909558 |
T |
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| Q |
125 |
tacacacatatacccttgcaaacacacggaatggaataatattgttaaattaaaaattacaagatgatattcctgcttattgttattaataattacaaga |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39909557 |
tacacacatatacccttgcaaacacacggaatggaataatattgttaaattaaaaattacaagatgatattcctgcttattgttattaataattacaaga |
39909458 |
T |
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| Q |
225 |
tgatattcctccttattg |
242 |
Q |
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|||||||||||||||||| |
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| T |
39909457 |
tgatattcctccttattg |
39909440 |
T |
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