View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19015_high_4 (Length: 397)
Name: NF19015_high_4
Description: NF19015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19015_high_4 |
 | |
|
| [»] scaffold0340 (1 HSPs) |
| | |
|
| [»] scaffold0113 (2 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 283; Significance: 1e-158; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 49 - 386
Target Start/End: Complemental strand, 55083114 - 55082779
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
55083114 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacgggggaagaagaccatgattccttcaagatcctttataaagtgagaga |
55083015 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaatttcattataaaggaagtggaaatttttggtgtggttaaaattagcaa |
248 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55083014 |
agtaacaagtttatatattttttct--tgaaagtgagagaattgtgttgaaatttcattataaaggaagtggaaatttttggtgtggttaaaattagcaa |
55082917 |
T |
|
| Q |
249 |
tagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagttttccatc |
348 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
55082916 |
tagcaaagccatatactttgacatcttggtaattcttggttatgccaatcatgtattatttatgtgcttcattatgtatgacatgtattagttttctatc |
55082817 |
T |
|
| Q |
349 |
tgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||||| ||||||| |||||||||| |||||||||| |
|
|
| T |
55082816 |
tgacaagtatggttgtcctttactatgttgactttcat |
55082779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 49 - 386
Target Start/End: Complemental strand, 56443816 - 56443471
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
56443816 |
cataatgaaatatacataatataattttattaccattcctttgaatcctaac-ggggaagaagaccatgattccttcaagatcctttataaagtgagaga |
56443718 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||||||||||||||||||| ||||||| |
|
|
| T |
56443717 |
agtaacaagtttatatattttttct--tgaaagtgagagaagtgtgttgatggtgtgcaccgcccacaatataaaggaagtggaaatttttgatgtggtt |
56443620 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| |||||| |||||| || |||| |||||||||||||||||||||||||||||||||||| || |
|
|
| T |
56443619 |
aaaattagcaatagcaaagccatatactttgacatctttgtaatttttggttatgccaatcatgtattatttatgtgcttcattatgtatgacatgtgtt |
56443520 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
56443519 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
56443471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 85 - 386
Target Start/End: Original strand, 6336501 - 6336812
Alignment:
| Q |
85 |
tcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagagaagtaacaagtttatatattttttctcttgaaagtga |
184 |
Q |
| |
|
|||| ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
6336501 |
tcctatgaatcctaacggggaaagaagatcatgattccttcaagatcctttataaagtgagagaagtaacaagtttatgtatttttt-tcttgaaagtga |
6336599 |
T |
|
| Q |
185 |
gagaagtgtgttgaaatt---------tcat--tataaaggaagtggaaatttttggtgtggttaaaattagcaatagcaaagccatatcctttgacatc |
273 |
Q |
| |
|
|||||||||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6336600 |
gagaagtgtgttgatggtgtgcaccactcataatataaaggaagtggaaatttttagtgtggttaaaattagcaatagcaaagccatatactttgacatc |
6336699 |
T |
|
| Q |
274 |
ttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttacta |
373 |
Q |
| |
|
|||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6336700 |
ttggtaattcttggttatgccaatcatgtattatttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttacta |
6336799 |
T |
|
| Q |
374 |
tgctgactttcat |
386 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
6336800 |
tggtgactttcat |
6336812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 49 - 386
Target Start/End: Complemental strand, 48083637 - 48083287
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacagggg-aagaagacaatgattccttcaagatcctttataaagtgagag |
147 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
48083637 |
cataatgaaatatacataatataatattattactattcctttcaatcctaacggggggaagaagaccatgattccttcaagatcttttataaagtgagag |
48083538 |
T |
|
| Q |
148 |
aagtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttga-----aattt----------cattataaaggaagtggaaatttttggtg |
232 |
Q |
| |
|
||||||||||||||| ||||||||| ||||| ||| ||||||||| ||| | | | || ||||| ||||||||||||||||||| |
|
|
| T |
48083537 |
aagtaacaagtttatgtattttttc--ttgaaggtg-gagaagtgtcttggtgtagagtgtgcagtgctcacaatataagagaagtggaaatttttggtg |
48083441 |
T |
|
| Q |
233 |
tggttaaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgta--tgac |
330 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| || | | ||||||||||||||||||||| || | |
|
|
| T |
48083440 |
tggttaaaattagcaa--gcaaagccatatattttgacatcttggtaattcttggttatgtcaatcatatgtcatttatgtgcttcattatgtatgtgtc |
48083343 |
T |
|
| Q |
331 |
atgtattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||| ||||||||||||||||||| ||||| |||| ||| |||||||||||||||| |
|
|
| T |
48083342 |
atgcattagttttccatctgacaggtgtgactgtattttgctatgctgactttcat |
48083287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 1613940 - 1613791
Alignment:
| Q |
237 |
taaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtat |
336 |
Q |
| |
|
|||||||| ||||| ||||||||||| |||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1613940 |
taaaattaacaataacaaagccatatactttgacatcttggtaattcttggttatgccaatcatgtattatttatgtgcttcattatgtatgacatgtat |
1613841 |
T |
|
| Q |
337 |
tagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
1613840 |
tagttttccatctcacaagtgtggttgtactttactatgctgactttcat |
1613791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 1614529 - 1614381
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
1614529 |
cataatgaaatatatataatataatattattaccattcctttgaatcctaacgggggaagaagaccatgattccttcaagattctttataaagtgagaga |
1614430 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttga |
198 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
1614429 |
agtaacaagtttatgtatttttt-tcttgaaagtgagagaagtgtgttga |
1614381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 42259775 - 42259908
Alignment:
| Q |
62 |
acataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagagaagtaacaagttta |
161 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
42259775 |
acataatataatattattaccattcctttgaatcctaat-ggggaagaagactatgattccttcaggatcttttataaagtgagagaagtaacaagttta |
42259873 |
T |
|
| Q |
162 |
tatattttttctcttgaaagtgagagaagtgtgttg |
197 |
Q |
| |
|
| |||||||| |||| |||||||||||||||||||| |
|
|
| T |
42259874 |
tgtatttttt-tcttcaaagtgagagaagtgtgttg |
42259908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 239 - 386
Target Start/End: Complemental strand, 12800675 - 12800528
Alignment:
| Q |
239 |
aaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatta |
338 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| ||| || |||||| ||||||| || | |||||||||||||||||| |||||| |||| |||| |
|
|
| T |
12800675 |
aaattagcaatagcaaagccatatattttgacatctttgtagtttttggttatgtcaatcatatgttatttatgtgcttcattttgtatgtcatgcatta |
12800576 |
T |
|
| Q |
339 |
gttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||| |||||||||| |
|
|
| T |
12800575 |
gttttccatctgacaggtgtggttgtactttgctatgttgactttcat |
12800528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 42259977 - 42260057
Alignment:
| Q |
306 |
atttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||| ||||||| ||||| |||||||| |||||||||||||||| |
|
|
| T |
42259977 |
atttatgtgcttcattatgtatgtcatgcattagttttccttctgacaggtgtgactgtactttgctatgctgactttcat |
42260057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 1614361 - 1614324
Alignment:
| Q |
207 |
tataaaggaagtggaaatttttggtgtggttaaaatta |
244 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
1614361 |
tataaagaaagtggaaatttttggtgtggttaaaatta |
1614324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 17215306 - 17215246
Alignment:
| Q |
282 |
tcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagttt |
342 |
Q |
| |
|
|||||||| || ||||||| | | ||||||||| ||||||||||||| |||| |||||||| |
|
|
| T |
17215306 |
tcttggttatgccaattatatgtcatttatgtgtttcattatgtatgccatgcattagttt |
17215246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 258; Significance: 1e-143; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 49 - 386
Target Start/End: Original strand, 1799200 - 1799544
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
1799200 |
cataataaaatatacataatataatattattacctttcctttgaatcctaac-ggggaagaagaccatgatttcttcaagatcctttataaagtgagaga |
1799298 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaatttcattataaaggaagtggaaatttttggtgtggttaaaattagcaa |
248 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1799299 |
agtaacaagtttatatattttttct--tgaaagtgagagaagtgtgttgaaatttcattataaaggaagtggaaatttttggtgtggttaaaattagcaa |
1799396 |
T |
|
| Q |
249 |
tagcaaagccat----------atcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatta |
338 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||| || || |||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1799397 |
taggaaagccatatactttgacatcctttgacatcttggtaattcttgattatgccaatcatatattatttatgtgcttcattatgtatgacatgtatta |
1799496 |
T |
|
| Q |
339 |
gttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1799497 |
gttttccatctgacaagtgtggttgtactttactatgctgactttcat |
1799544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 49 - 386
Target Start/End: Original strand, 16834861 - 16835207
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
16834861 |
cataatgaaatatacataatataatattattaccattcctttgaatcctaacgggggaagaaaaccatgattccttcaagatcctttataaagtgagaga |
16834960 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||| |||||||||||||||||| |
|
|
| T |
16834961 |
agtgacaagtttatatattttttct--tgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtagaaatttttggtgtggtt |
16835058 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16835059 |
aaaattagcaatagcaaagccatatactttgacatcttggtaattcttgggtatgtcaatcatgtattatttatgtgcttcattatgtaagacatgtatt |
16835158 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
16835159 |
agttttccatctgacaaatgtggttgtactttattatgctgactttcat |
16835207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 49 - 386
Target Start/End: Original strand, 46294921 - 46295267
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
46294921 |
cataatgaaatatacataatataattttattaccactcctttgaatcttaac-ggggaagaagaccatgattccttcaagatcctttataaagtgagaga |
46295019 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |
|
|
| T |
46295020 |
agtaacaagtttatgtatttttt-tcttgaaagtgagagaagtgtgttgacggtgtgcaccgctcacaatataaaggaagtggaaatttttggtgtggtt |
46295118 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46295119 |
aaaattagcaatagcaaagccatatactttgacatcttgataattcttggttatgccaatcatgtattatttatgtgcttcattatgtatgacatgtatt |
46295218 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
46295219 |
agtttttcatctgacaaatgtggttgtactttactatgctgactttcat |
46295267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 50 - 386
Target Start/End: Complemental strand, 44431875 - 44431529
Alignment:
| Q |
50 |
ataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagagaa |
149 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
44431875 |
ataatgaaatatacataatataatattattaccattcctttgaatcgtaacgggggaagaagaccatgattctttcaagatcctttataaagtgagagaa |
44431776 |
T |
|
| Q |
150 |
gtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtta |
238 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||||||||||||| | || ||||||||||||| || ||||||||||||||| |
|
|
| T |
44431775 |
gtaacaagtttatgtatttttt-tcttgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtgaaattttttggtgtggtta |
44431677 |
T |
|
| Q |
239 |
aaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatta |
338 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44431676 |
aaattagcaatagcaaagccatatactttgacatcttggtaattcttggttatgccaatcatgtattatttatgtgcttcattatgtatgacatgtatta |
44431577 |
T |
|
| Q |
339 |
gttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
44431576 |
gttttccatctaacaagtgcggttgtactttactatgttgactttcat |
44431529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 52 - 386
Target Start/End: Original strand, 21246945 - 21247289
Alignment:
| Q |
52 |
aatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaa-gaagacaatgattccttcaagatcctttataaagtgagagaag |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
21246945 |
aatgaaatatacataatataatattattaccattgctttgaatcctaacgggggaaagaagaccatgattccttcaagatcctttataaagtgagagaag |
21247044 |
T |
|
| Q |
151 |
taacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggttaa |
239 |
Q |
| |
|
|||||| ||||| |||||||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||| |
|
|
| T |
21247045 |
taacaattttatgtattttttct--tgaaagtgagagaagtgtgttggtgttgtgcaccgctcacaatataaaggaagtggaaatttttggtgtggttaa |
21247142 |
T |
|
| Q |
240 |
aattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattag |
339 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |||||||||| || |||| || |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21247143 |
aattagcaatagcaaagccatatattttgacatcttggttattcttggttatgccaatcatatattatttatgtgcttcattatgtatcacatgtattag |
21247242 |
T |
|
| Q |
340 |
ttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
21247243 |
ttttccatctgacaagtatggctgtactttactatgctgactttcat |
21247289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 139 - 386
Target Start/End: Complemental strand, 39365428 - 39365183
Alignment:
| Q |
139 |
aagtgagagaagtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaatttcattataaaggaagtggaaatttttggtgtggtta |
238 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39365428 |
aagtgagagaagtaagaagtttatatattttttct--tgaaagtgagagaagtgtgttgaaatttcattataaaggaagtggaaatttttggtgtggtta |
39365331 |
T |
|
| Q |
239 |
aaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatta |
338 |
Q |
| |
|
||||||| |||||||||||||||| || ||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39365330 |
aaattagtaatagcaaagccatatactatgacatcttggtaattcttaattatgtcaatcatgtattatttatgtgcttcattatgtatgacatgtatta |
39365231 |
T |
|
| Q |
339 |
gttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39365230 |
gttttccatctgacaagtgtggttgtactttactatgctgactttcat |
39365183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 50 - 386
Target Start/End: Complemental strand, 25377422 - 25377074
Alignment:
| Q |
50 |
ataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagagaa |
149 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
25377422 |
ataatgaaatctacataatataatattattacaattcttttgaatcctaacgagggaagaagaccatgattccttcaagatcttttataaagtgagagaa |
25377323 |
T |
|
| Q |
150 |
gtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttg----aaa-----------tttcattataaaggaagtggaaatttttggtgtg |
234 |
Q |
| |
|
| |||||| |||| ||||||| ||||||||||||||||||||||||| | | | || | ||||||||||||||||| |||||||| |
|
|
| T |
25377322 |
gcaacaagcttatgtattttt--tcttgaaagtgagagaagtgtgttggtgtagagtatgcagtgctcacaatgtaaaggaagtggaaattattggtgtg |
25377225 |
T |
|
| Q |
235 |
gttaaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgt |
334 |
Q |
| |
|
|||||||||| |||||| ||| ||||| ||||||||||| ||||||||||||| || |||| | | | |||||||||||||| |||||||| |||| |
|
|
| T |
25377224 |
gttaaaattaacaatag-aaaatcatatattttgacatcttagtaattcttggttatgcaaattctatgtgatttatgtgcttcactatgtatgtcatgc |
25377126 |
T |
|
| Q |
335 |
attagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||||||| ||| |||| ||||| |||||||| ||||| |||||||||| |
|
|
| T |
25377125 |
attagttttctatccgacaggtgtgactgtactttgctatgttgactttcat |
25377074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 19075991 - 19075874
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
19075991 |
cataatgaaatatacataatataatattattaccattcctttgaatcctaac-------gaagaccatgattccttcaagatcctttataaagtgagaga |
19075899 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttct |
173 |
Q |
| |
|
|||||||||||||| |||||||||| |
|
|
| T |
19075898 |
agtaacaagtttatgtattttttct |
19075874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 19123881 - 19123764
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
19123881 |
cataatgaaatatacataatataatattattaccattcctttgaatcctaac-------gaagaccatgattccttcaagatcctttataaagtgagaga |
19123789 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttct |
173 |
Q |
| |
|
|||||||||||||| |||||||||| |
|
|
| T |
19123788 |
agtaacaagtttatgtattttttct |
19123764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 259 - 386
Target Start/End: Complemental strand, 29487756 - 29487629
Alignment:
| Q |
259 |
atatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgt |
358 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || ||| || ||| ||||||||||||||||||||||| |||| ||||||||||||||||||| |||| |
|
|
| T |
29487756 |
atatgctttgacatcttggtaattcttggttatgcgaatcatatatcatttatgtgcttcattatgtatgtcatgcattagttttccatctgacaggtgt |
29487657 |
T |
|
| Q |
359 |
ggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|| |||||||| |||||||||||||||| |
|
|
| T |
29487656 |
ggctgtactttgctatgctgactttcat |
29487629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 241 - 382
Target Start/End: Complemental strand, 42775206 - 42775065
Alignment:
| Q |
241 |
attagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagt |
340 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||||||||||| || |||| || | | |||| ||||||| |||||||||| |||| |||||| |
|
|
| T |
42775206 |
attaccaatagcaaagccatatattttgacatcttggtaattcttggttatgccaatcatatgtcatttctgtgctttattatgtatgtcatgcattagt |
42775107 |
T |
|
| Q |
341 |
tttccatctgacaagtgtggttgtactttactatgctgactt |
382 |
Q |
| |
|
||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
42775106 |
tttccatctgacaggtgtggctgtactttgctatgctgactt |
42775065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 359
Target Start/End: Original strand, 16797891 - 16797973
Alignment:
| Q |
277 |
gtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtg |
359 |
Q |
| |
|
||||||||||||| ||||||| |||| ||||||||||||||||||||||| ||| |||||||||| ||||||||| ||||| |
|
|
| T |
16797891 |
gtaattcttggttatgtcaatcatgtgccatttatgtgcttcattatgtatgccatatattagtttttcatctgacaggtgtg |
16797973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 247; Significance: 1e-137; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 49 - 386
Target Start/End: Complemental strand, 26509 - 26163
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26509 |
cataacgaaatatacataatataatattattatttttcctttgaatcctaacgggagaagaagaccatgattccttcaagatcctttataaagtgagaga |
26410 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaatttcattataaaggaagtggaaatttttggtgtggttaaaatt-agca |
247 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||| |
|
|
| T |
26409 |
agtaacaagtttatatattttt--tcttgaaagtgagagaagtgtgttgaaatttcattataaaggaagtgaagatttttggtgtggttaaaattaagca |
26312 |
T |
|
| Q |
248 |
atagcaaagccat----------atcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26311 |
atagcaaagccatatactttgacatcctttgacatcttggtaattcttggttatgccaatcatgtattatttatgtgcttcattatgtatgacatgtatt |
26212 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26211 |
agttttccatctgacaagcgtggttgtactttactatgctgactttcat |
26163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 49 - 386
Target Start/End: Original strand, 15565020 - 15565366
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
15565020 |
cataatgaaatatacataatataatattattaccattcctttgaattctaatgggggaagaagatcatgattccttcaagatcctttataaagtgagaga |
15565119 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||||||||| | | || ||||||||| ||| ||||||||||||||||| |
|
|
| T |
15565120 |
agtaacaaatttatatattttttct--tgaaagtgagagaagtgtgttgatagtgtgcaccggtcacaatataaaggacgtgtaaatttttggtgtggtt |
15565217 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15565218 |
aaaattagcaatagcaaagccatatactttgacatcttggtaattcttggttatgccaatcatgtattatttatgtgcttcattatgtatgacatgtatt |
15565317 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15565318 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
15565366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 49 - 386
Target Start/End: Complemental strand, 20832401 - 20832057
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
20832401 |
cataatgaaatatacataatataatattattaacattcctttgaatcctaacaggggaagaagaccatgattccttcaagatcctttattaagtgagaga |
20832302 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaa-attt----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
||| |||||||||| |||||||||| ||||||||||| |||||||||| || | || |||||||||||||||||||||||||| ||| |
|
|
| T |
20832301 |
agtcacaagtttatgtattttttct--tgaaagtgagataagtgtgttggtgatgtgcaccggtcacagtataaaggaagtggaaatttttggtg--gtt |
20832206 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
20832205 |
aaaattagcaatagcaaagccatatactttgacatcttggtaatttttggttatgtcaatcatgcattatttatgtgcttcattatgtatgacatgtatt |
20832106 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20832105 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
20832057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 109 - 386
Target Start/End: Complemental strand, 44308733 - 44308451
Alignment:
| Q |
109 |
aagacaatgattccttcaagatcctttataaagtgagagaagtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt----- |
203 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| | |
|
|
| T |
44308733 |
aagaccatgattccttcaagatcctttataaagtgagagaagtaacaagtttatgtattttttct--tgaaagtgagagaagtgtgttgatggtgtgcac |
44308636 |
T |
|
| Q |
204 |
------cattataaaggaagtggaaatttttggtgtggttaaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaat |
297 |
Q |
| |
|
|| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |
|
|
| T |
44308635 |
cgctcacaatataaatgaaatggaaatttttggtgtggttaaaattagcaatagcaaagccatatactttgacatcttggtaattcttggttatgccaat |
44308536 |
T |
|
| Q |
298 |
tatgtattatttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| |
|
|
| T |
44308535 |
catgtattatttatgtgcttcattatgtatgacatgtattagttttccatctaac----gtggttgtactttactatgttgactttcat |
44308451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 49 - 386
Target Start/End: Complemental strand, 12502771 - 12502431
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| || |||||||||||| ||||||||||| || ||| ||||||||||||| |||||||||||||||| |
|
|
| T |
12502771 |
catagtgaaatatacataatataatattattaccatttctttgaatcctatcaggggaagaataccatgtttccttcaagatcttttataaagtgagaga |
12502672 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttg----aaa-----------tttcattataaaggaagtggaaatttttggtgt |
233 |
Q |
| |
|
|||||||||| ||| ||||||| ||||||||||||||||||||||||| | | | || ||||||||||||||||||||||||||| |
|
|
| T |
12502671 |
agtaacaagtatatgtattttt--tcttgaaagtgagagaagtgtgttggtgtagagtgtgcagtgctcacaatataaaggaagtggaaatttttggtgt |
12502574 |
T |
|
| Q |
234 |
ggttaaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatg |
333 |
Q |
| |
|
||||||||| |||||||||||||| |||| |||||| ||||||||| ||||||| || | | |||||||||||| |||||||||| ||| |
|
|
| T |
12502573 |
ggttaaaatgagcaatagcaaagcgatatattttgac----------ttcttggttatgtcaatcatatgtcatttatgtgctttattatgtatgttatg |
12502484 |
T |
|
| Q |
334 |
tattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||||||| ||||| |
|
|
| T |
12502483 |
cattagttttccatctgacatgtgtggttgtactttgttatgctgacgttcat |
12502431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 49 - 386
Target Start/End: Complemental strand, 25630859 - 25630519
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| |||| |||| |||||||||||| | |||||||||||||| |||||||||||||||| |
|
|
| T |
25630859 |
cataatgaaatatacataatataatattattaccattccttggaattctaatgggggaagaagaccacaattccttcaagatcttttataaagtgagaga |
25630760 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttg----aaa-----------tttcattataaaggaagtggaaatttttggtgt |
233 |
Q |
| |
|
|||||||| ||||| ||||||| |||||||| |||| ||||| ||||| | | | || |||||||||||||||||||| |||||| |
|
|
| T |
25630759 |
agtaacaaatttatgtattttt--tcttgaaactgagcgaagtatgttggtgtacagtgtgcagtgctcacaatataaaggaagtggaaatttatggtgt |
25630662 |
T |
|
| Q |
234 |
ggttaaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatg |
333 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||| ||||| || || |||| || | | ||||||||||||||||||||||| |||| |
|
|
| T |
25630661 |
ggttaaaattagcaataacaaagccatatattttgaca----------tcttgtttatgccaatcatatgtcatttatgtgcttcattatgtatgtcatg |
25630572 |
T |
|
| Q |
334 |
tattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||| | |||||| | |||||| |||||||||||||||| |
|
|
| T |
25630571 |
cattagttttccatctgaaaggtgtggctctactttgctatgctgactttcat |
25630519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 49 - 386
Target Start/End: Complemental strand, 35235531 - 35235186
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
35235531 |
cataatgaaatatacataatataattttattaccattcatttgaatcctaacgggggaagaagaccatgattccttcaagatcctttataaagtgagaga |
35235432 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt----------cattataaaggaagtggaaatttttggtgtggtta |
238 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| | | || |||||||||||||||||||||||||||||||| |
|
|
| T |
35235431 |
agtaacaagtttatatattttttct--tgaaagtgagagaagtgtgttgaggtgtgcaccgctcacaatataaaggaagtggaaatttttggtgtggtta |
35235334 |
T |
|
| Q |
239 |
aaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatta |
338 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
35235333 |
aaattagcaatagcaaagccatataatttgacatcttggtaattcttggttatgtcaatcatgtattatttatgtgcttcattatgtttgacatgtatta |
35235234 |
T |
|
| Q |
339 |
gttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
35235233 |
gttttccatctgacatgtgtggttgtactttactatgctgactttcat |
35235186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 49 - 384
Target Start/End: Complemental strand, 20819910 - 20819567
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| || | || |||||||| ||||||||||||||||| |
|
|
| T |
20819910 |
cataatgaaatatacataatataatattattaccattcctttgaatcctaacgggggaagaagaccataactcattcaagattctttataaagtgagaga |
20819811 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||||| |
|
|
| T |
20819810 |
agtaacaagtttatgtattttttct--tgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtg-aaatttttggtgtggtt |
20819714 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
20819713 |
aaaattagcaatagcaaggccatatactttgacatcttggtaattcttggttatgccaatcatgtattatttatgtgcttcattatgtttgacatgtatt |
20819614 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttc |
384 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20819613 |
agttttccatctgacaagtgtggttgtactttactatgctgactttc |
20819567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 52 - 386
Target Start/End: Original strand, 40065988 - 40066331
Alignment:
| Q |
52 |
aatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagagaagt |
151 |
Q |
| |
|
|||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
40065988 |
aatgaaatatacataatataattttattaccatttctttgaatcctaacgggggaagaagaccatggttccttcaagatcctttataaagtgagagaagt |
40066087 |
T |
|
| Q |
152 |
aacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggttaaa |
240 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||| |
|
|
| T |
40066088 |
aacaagtttatatattttttct--tgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtggaaatttttggtgtggttaaa |
40066185 |
T |
|
| Q |
241 |
attagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagt |
340 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40066186 |
attagcaatatcaaagtcatatactttgacatcttggtaattcttggttacaccaatcatgtattatttatgtgcttcattatgtatgacatgtattagt |
40066285 |
T |
|
| Q |
341 |
tttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
40066286 |
tttccatttgacaagtgtggttgtactttactatgttgactttcat |
40066331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 52 - 386
Target Start/End: Original strand, 32751185 - 32751528
Alignment:
| Q |
52 |
aatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagagaagt |
151 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32751185 |
aatgaaatatacataatataatattattaccattcctttgaatcctaaatggggaagaagaccatgattccttcaagatcctttataaagtgagagaagt |
32751284 |
T |
|
| Q |
152 |
aacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggttaaa |
240 |
Q |
| |
|
|| |||||||| |||||||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||| |
|
|
| T |
32751285 |
aataagtttatgtattttttct--tgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtggaaatttttggtgtggttaaa |
32751382 |
T |
|
| Q |
241 |
attagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagt |
340 |
Q |
| |
|
||||||||||||||| |||||| |||||||| ||| ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32751383 |
attagcaatagcaaaaccatatattttgacatgttgataattgttggttatgtcaatcatgtattatttatgtgcttcattatgtatgacatgtattagt |
32751482 |
T |
|
| Q |
341 |
tttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
32751483 |
ttttcatctgacaagtgtggttgtactttactacattgactttcat |
32751528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 49 - 382
Target Start/End: Original strand, 54627521 - 54627863
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
54627521 |
cataatgaaatatacataatataatattattaccattcctttgaatcctaacgggggaagaagatcatgattccttcaagattctttataaagtgagaga |
54627620 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||| | || |||||||||||||||||||||| |||||||| |
|
|
| T |
54627621 |
agtaacaagtttatgtattttttct--tgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtggaaattttttgtgtggtt |
54627718 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||||||||||||||| || |||| ||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
54627719 |
aaaattagcaatagcaaagcaatatactttgacatcttggtaattcttggttatgccaatcatgtattatatatgtgtttcattatgtatgacatgtatt |
54627818 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactt |
382 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||||||||||| ||||| |
|
|
| T |
54627819 |
agtttttcatcagacaaatgtggttgtactttactatgcagactt |
54627863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 49 - 386
Target Start/End: Original strand, 54602617 - 54602967
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||| ||| |
|
|
| T |
54602617 |
cataatgaaatatacataatataatattattaccatttctttgaatccttacgggggaagaagaccatggttccttcaagatcctttataaagtgaaaga |
54602716 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt---------------cattataaaggaagtggaaatttttggtgt |
233 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||| | ||||||||||| | || |||||||||| || ||||||||||||| |
|
|
| T |
54602717 |
agtaacaggtttatatattttttct--tgaaagtgacataagtgtgttgatggtgtgcatgcaccgctcacaatataaaggaaatgaaaatttttggtgt |
54602814 |
T |
|
| Q |
234 |
ggttaaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatg |
333 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || |||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
54602815 |
ggttaaaattagcaatagcaaagtcatatactttgacatcttggtaattcttggttatgccaatcatgtcttatttatgtgcttcattatgtatgacatg |
54602914 |
T |
|
| Q |
334 |
tattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54602915 |
tattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
54602967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 49 - 386
Target Start/End: Original strand, 24782570 - 24782925
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
24782570 |
cataatgaaatttacataatataatattattaccattcttttgaatcctaac-ggggaagaagaccatgattccttcaagatcctttataaagtgagaga |
24782668 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| |||||||||||||||| | || ||||||||||||||||||||||||||||||| |
|
|
| T |
24782669 |
agtaacaagtttatgtatttttt-tcttgaaagcgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtggaaatttttggtgtggtt |
24782767 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtatta-tttatgtgcttcattatgtatgacatgtat |
336 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
24782768 |
aaaattagcaatagcaaagccatatactttgacatcttggtaattcttggttatgtcaatcatgtattattttatgtgctttattatgtatgacatgtat |
24782867 |
T |
|
| Q |
337 |
tagttttcc--------atctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
24782868 |
tagttttccatctgacaatctgacaagtgtgattgtactttactatgctgactctcat |
24782925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 207 - 386
Target Start/End: Complemental strand, 1092535 - 1092356
Alignment:
| Q |
207 |
tataaaggaagtggaaatttttggtgtggttaaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtatta |
306 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
1092535 |
tataaaggaagtgaaaatttttggtgtggttaaaattagcaatagcaaagccatatattgtgacatcttggtaattcttggttatgtcaattaagtatta |
1092436 |
T |
|
| Q |
307 |
tttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1092435 |
tttatgtgcttcattatgtatgacatgtattagttttccatctggcaagtgtggttgtactttactatgctgactttcat |
1092356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 50 - 383
Target Start/End: Complemental strand, 35234427 - 35234087
Alignment:
| Q |
50 |
ataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagagaa |
149 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| ||| ||||||||||||| || |||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
35234427 |
ataatgaactatacataatataatattattaccattcatttgaatcctaacggg------agaccatgattccttcaagatcttttataaagtgagagaa |
35234334 |
T |
|
| Q |
150 |
gtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttga-----aattt----------cattataaaggaagtggaaatttttggtgtg |
234 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||||||||||| | | | || |||||||| ||||||||||||||||||| |
|
|
| T |
35234333 |
gtaacaagtttatgtattttttct--tgaaagtgagagaagtgtgttggtgtagagtgtgtagtgctcacaatataaagggagtggaaatttttggtgtg |
35234236 |
T |
|
| Q |
235 |
gttaaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgt |
334 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||| || | | ||| ||||||||||||||||||| |||| |
|
|
| T |
35234235 |
gttaaaattagcaatagcaaagccatatattttgacatcttggtaattcttggttatgccaatcatatgtcattcatgtgcttcattatgtatgtcatgc |
35234136 |
T |
|
| Q |
335 |
attagttttccatctgacaagtgtggttgtactttactatgctgacttt |
383 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||| |||||||| |||| |
|
|
| T |
35234135 |
attagttttccatctgacaggtgtggctgtactttgctatgctgtcttt |
35234087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 239 - 386
Target Start/End: Complemental strand, 54493208 - 54493060
Alignment:
| Q |
239 |
aaattagcaatagcaaagccatatcctttgacatcttggtaattctt-ggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| ||||| || || | || |||| || | | |||||||||||||||||||||| |||| ||| |
|
|
| T |
54493208 |
aaattagcaatagcaaagccatatattttgacatcttgataattttttggctatgccaatcatatgtcatttatgtgcttcattatgtataccatgcatt |
54493109 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||| ||| ||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
54493108 |
agtttttcatttgacaggtgtggttatactttgttatgctgactttcat |
54493060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 55482059 - 55482139
Alignment:
| Q |
306 |
atttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||| ||| |||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
55482059 |
atttatgtgcttcattatgtatgtcatgcattagtttttcatatgacaagtgtggctgtacgttgctatgctgactttcat |
55482139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 1092610 - 1092556
Alignment:
| Q |
142 |
tgagagaagtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttg |
197 |
Q |
| |
|
|||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
1092610 |
tgagtgaagtaacaagtttatgtatttttt-tcttgaaagtgagagaagtgtgttg |
1092556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 55481556 - 55481641
Alignment:
| Q |
272 |
tcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtg |
357 |
Q |
| |
|
||||||||||| |||||| || |||| || | | ||||||||||||||||||||||| ||| ||||||||| |||| ||||||| |
|
|
| T |
55481556 |
tcttggtaattattggttatgccaatcatatgtcatttatgtgcttcattatgtatgtaatgcattagtttttaatctaacaagtg |
55481641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 49 - 386
Target Start/End: Original strand, 15830348 - 15830694
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||| ||| |
|
|
| T |
15830348 |
cataatgaaatatacataatataatattattaccattcctttgaatcctaacgggggaagaagaccatgattccttcaagattctttataaagtgataga |
15830447 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||| | || ||||||||||||| || |||||||||||||| |
|
|
| T |
15830448 |
agtaacaagtttatgtattttttct--tgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtgaaattttttggtgtggtt |
15830545 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15830546 |
aaaattagcaatagcaaagccatatactttgacatcttggtaattcttggttatgccaatcatgtattatttatgtgcttcattatgtatgacatgtatt |
15830645 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
15830646 |
agttttccatctcacaagtgtggttgtactttactatgttgactttcat |
15830694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 49 - 386
Target Start/End: Original strand, 9708367 - 9708723
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9708367 |
cataatgaaatatacataatataatattattaccattcctttgaatcctaacgggggaagaagaccatgattccttcaagatcctttataaagtgagaga |
9708466 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttga-----------aatttcattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||||| |
|
|
| T |
9708467 |
agtaacaagtttatgtattttt--tcttgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtgaaaatttttggtgtggtt |
9708564 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccat----------atcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtat |
327 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
9708565 |
aaaattagcaatagcaaagccatatactttgacatcctttgacatcttggtaattcttggttatgccaatcatgtattatttatgtgcttcattatgtat |
9708664 |
T |
|
| Q |
328 |
gacatgtattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
9708665 |
gacatgtattagttttccatctgacaagtgtgattctactttactatgctgactttcat |
9708723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 49 - 386
Target Start/End: Complemental strand, 36207647 - 36207315
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaaca-ggggaagaagacaatgattccttcaagatcctttataaagtgagag |
147 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
36207647 |
cataatgaaatatagataatataatattattaccattcctttgaatcataacgcggggaagaagaccatgattccttcaagatcttttataaagtgagag |
36207548 |
T |
|
| Q |
148 |
aagtaacaagtttatatattttttctcttgaaagtga------gagaagtgtgttgaaatttcattataaaggaagtggaaatttttggtgtggttaaaa |
241 |
Q |
| |
|
| |||| |||||||| ||||||||| |||| |||| | |||| | | | || |||||||||||| |||||||||||||||||||||| |
|
|
| T |
36207547 |
aggtaagaagtttatgtattttttc--ttgatagtgtattggtgtagagtgcgcagtgctcacaatataaaggaagttgaaatttttggtgtggttaaaa |
36207450 |
T |
|
| Q |
242 |
ttagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagtt |
341 |
Q |
| |
|
||||||||| ||||| ||||| ||||||||||||| || |||||| || | | ||||||||||||||||||||||| |||| |||| || |
|
|
| T |
36207449 |
ttagcaataacaaaggcatatatgttgacatcttggttat----------gtcaatcatatgtcatttatgtgcttcattatgtatgtcatgcattaatt |
36207360 |
T |
|
| Q |
342 |
ttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||| ||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
36207359 |
ttccatgtgacaggtgtggttgtactttgctatgctgactttcat |
36207315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 385
Target Start/End: Complemental strand, 38937804 - 38937701
Alignment:
| Q |
282 |
tcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttactatgctgact |
381 |
Q |
| |
|
|||||||| || ||||||| | | ||||||||| ||||| |||||| ||| ||||||||| ||||||||| |||| ||||||||||| |||||||||| |
|
|
| T |
38937804 |
tcttggttatgccaattatatgtcatttatgtgtttcatcgtgtatgctatgcattagtttttcatctgacaggtgtagttgtactttattatgctgact |
38937705 |
T |
|
| Q |
382 |
ttca |
385 |
Q |
| |
|
|||| |
|
|
| T |
38937704 |
ttca |
38937701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 50 - 386
Target Start/End: Complemental strand, 26832220 - 26831874
Alignment:
| Q |
50 |
ataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagagaa |
149 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
26832220 |
ataatgaaatatacataatataaaattattacaattcctttgaatcctaacgggggaagaagaccatgattccttcaagatcctttataaagtgagagaa |
26832121 |
T |
|
| Q |
150 |
gtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtta |
238 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||| |
|
|
| T |
26832120 |
gtaacaagtttatgtatttttt-tcttgaaagtgagagaagtgtgttggtggtgtgcaccgctcacaatataaaggaagtggaaatttttggtgtggtta |
26832022 |
T |
|
| Q |
239 |
aaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatta |
338 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26832021 |
aaattagcaatagcaaagccatatactgtgacatcttggtaattcttggttatgccaatcatgtattatttatgtgcttcattatgtatgacatgtatta |
26831922 |
T |
|
| Q |
339 |
gttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
26831921 |
gtttttcatctgacaagtgtggctgtactttactatgttgactttcat |
26831874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 49 - 386
Target Start/End: Original strand, 14103313 - 14103660
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
14103313 |
cataatgaaatatacataatataatattattatcattcctttgaatcctaacgggggaagaagaccatgattctttcaagatcctttataaagtgagaga |
14103412 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|| ||||||||||| |||||||| |||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |
|
|
| T |
14103413 |
aggaacaagtttatgtatttttt-tcttgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtggaaatttttggtgtggtt |
14103511 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
14103512 |
aaaattagcaatagcaaagccatatattttgatatcttggtaattcttggttatgtcaatcatgtattatttatgtgtttcattatgtatgacatgtatt |
14103611 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||| |||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
14103612 |
agtttttcatctgacaagtatgattgtactttactatgctgactttcat |
14103660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 49 - 386
Target Start/End: Original strand, 14413330 - 14413677
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
14413330 |
cataatgaaatatacataatataatattattatcattcctttgaatcctaacgggggaagaagaccatgattctttcaagatcctttataaagtgagaga |
14413429 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|| ||||||||||| |||||||| |||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |
|
|
| T |
14413430 |
aggaacaagtttatgtatttttt-tcttgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtggaaatttttggtgtggtt |
14413528 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
14413529 |
aaaattagcaatagcaaagccatatattttgatatcttggtaattcttggttatgtcaatcatgtattatttatgtgtttcattatgtatgacatgtatt |
14413628 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||| |||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
14413629 |
agtttttcatctgacaagtatgattgtactttactatgctgactttcat |
14413677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 49 - 386
Target Start/End: Complemental strand, 36898080 - 36897737
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||| | | ||||||||||||||||| || |||||||||| | |||||||||||||||||||||||| |||||| |
|
|
| T |
36898080 |
cataatgaaatatacataatataatattatcaacattcctttgaatcctaacgggtgaagaagaca-taattccttcaagatcctttataaagcgagaga |
36897982 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||||| |
|
|
| T |
36897981 |
agtaacaagtttatgtattttttct--tgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtgaaaatttttggtgtggtt |
36897884 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
|||||| |||||||||||| ||||| ||||||||||||||||||||||| | || |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36897883 |
aaaatttgcaatagcaaagtcatatactttgacatcttggtaattcttgactatgccaatcatgtattatttatgtgcttcattatgtatgacatgtatt |
36897784 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
36897783 |
agtttttcatct--caagtgtggttgtactttactatgctgactttcat |
36897737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 49 - 383
Target Start/End: Complemental strand, 15752913 - 15752568
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||| ||||||||| |||||| ||||| ||||||||||||||||| |||||||| | ||||| |
|
|
| T |
15752913 |
cataatgaaatataaataatataatattattaccactcctttcaatcctaacgggggaaaaagaccatgattccttcaagatcttttataaaatcagaga |
15752814 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtg---tgttgaaattt------------cattataaaggaagtggaaatttttggtgt |
233 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| ||||||||||| || || | | || ||||||||||||||||||||||||||| |
|
|
| T |
15752813 |
agtaacaagtttatgtattttttttcttgaaaatgagagaagtgtggtggtgtacggtgtgcagtgctcacaatataaaggaagtggaaatttttggtgt |
15752714 |
T |
|
| Q |
234 |
ggttaaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatg |
333 |
Q |
| |
|
|||||| |||||||||| ||||||||||| || ||||||| |||||||||||||| || |||| || | | |||||||||||||||||||||||| ||| |
|
|
| T |
15752713 |
ggttaagattagcaataacaaagccatatatttcgacatctcggtaattcttggttatgccaatcatatgtcatttatgtgcttcattatgtatgatatg |
15752614 |
T |
|
| Q |
334 |
tattagttttccatctgacaagtgtggttgtactttactatgctgacttt |
383 |
Q |
| |
|
|||| ||||| || ||||| |||||| |||| ||||||||||||| |
|
|
| T |
15752613 |
cattacttttctatttgaca----gggttgttctttgctatgctgacttt |
15752568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 294 - 386
Target Start/End: Complemental strand, 26928510 - 26928418
Alignment:
| Q |
294 |
caattatgtattatttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26928510 |
caatcatgtattatttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttactatgctgattttcat |
26928418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 239 - 368
Target Start/End: Complemental strand, 42261242 - 42261113
Alignment:
| Q |
239 |
aaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatta |
338 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||| ||||| |||||| | ||| || | | |||||||||||| |||||||||| |||| |||| |
|
|
| T |
42261242 |
aaattagcaatagcaaaaccatatattttgacatcttgataatttttggttataccaaacatatgtcatttatgtgctttattatgtatgtcatgcatta |
42261143 |
T |
|
| Q |
339 |
gttttccatctgacaagtgtggttgtactt |
368 |
Q |
| |
|
||||| |||||||| |||||||||||||| |
|
|
| T |
42261142 |
tttttctatctgacatgtgtggttgtactt |
42261113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0340 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: scaffold0340
Description:
Target: scaffold0340; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 49 - 382
Target Start/End: Complemental strand, 1986 - 1652
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||||||||||| || ||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1986 |
cataatgaaatatacatcatataatattattaccattcctttgaatcctaacgggagaaaaagacaatgattctttcaagatcctttataaagtgagaga |
1887 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaatttcat--tataaaggaagtggaaatttttggtgtggttaaaattagc |
246 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||| ||| |||| | ||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1886 |
agtaacaagtttatgtattttttttcttgaaagtgaga-aagggtgtgcaccgctcacaatataaaggaagtgaaaatttttggtgtggttaaaattagc |
1788 |
T |
|
| Q |
247 |
aatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagttttcca |
346 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||| ||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1787 |
aatagcaaagccatatactttgacatcttgataattcttagttatgcgaatcatgtattatttatgtgcttcattatgtatgacatgtattagttttcca |
1688 |
T |
|
| Q |
347 |
tctgacaagtgtggttgtactttactatgctgactt |
382 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
1687 |
tctgacaagtgtggttgtactttactatgctgactt |
1652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 216; Significance: 1e-118; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 49 - 386
Target Start/End: Complemental strand, 5574653 - 5574308
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
5574653 |
cataatgaaatatacataatataatattcttaccattcttttgaatcctaac-ggggaagaagagcatgattccttcaagatcctttataaagtgagaga |
5574555 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |
|
|
| T |
5574554 |
agtaacaagtttatgtattttttct--tgaaagtgagagaagtgtgttggtggtgtgcaccgctcacaatataaaggaagtggaaatttttggtgtggtt |
5574457 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5574456 |
aaaattagcaatagcaaagccatatactgtgacatcttggtaattatcggttatgtcaatcatgtattatttatgtgcttcattatgtatgacatgtatt |
5574357 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
5574356 |
agttttccatctgacaagtgtggctgtactttactatgctgactttcat |
5574308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 49 - 386
Target Start/End: Original strand, 17647783 - 17648128
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
17647783 |
cataatgaaatatacataatataatattattaccatttctttgaatcctaacgggagaagaagaccatgattccttcaagattctttataaagtgagaga |
17647882 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttgaaattt-----------cattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||||| |
|
|
| T |
17647883 |
agtaacaagtttatgtattttttct--tgaaagtgagagaagtgtgttgatggtgtgcaccgctcacaatataaaggaagtg-aaatttttggtgtggtt |
17647979 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||||| ||||||| || |||||||||| |||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17647980 |
aaaattagcaatagcaaggccatatactctgacatcttgttaattcttggttatgtcaatcatatattatttatgtgcttcattatgtttgacatgtatt |
17648079 |
T |
|
| Q |
338 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17648080 |
agttttccatctgacaagtgtggttgtactttactatgctgactttcat |
17648128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 133 - 386
Target Start/End: Original strand, 6914937 - 6915193
Alignment:
| Q |
133 |
tttataaagtgagagaagtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttg----aaatt-----------tcattataaaggaag |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| | | | ||| ||||||||||| |
|
|
| T |
6914937 |
tttataaagtgagagaagtaacaagtttatgtattttttct--taaaagtgagagaagtgtgttggtgtagagtgtgcagtgctctcaatataaaggaag |
6915034 |
T |
|
| Q |
218 |
tggaaatttttggtgtggttaaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgctt |
317 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||||| || | | |||||||||||| |
|
|
| T |
6915035 |
tgggaatttttggtgtggttaaaattagcaataacaaagccatatattttgacgtcttggttat----------gtcaatcatatgtcatttatgtgctt |
6915124 |
T |
|
| Q |
318 |
cattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||| |
|
|
| T |
6915125 |
cattatgtatgtcatgcattagttttccatctgacaggtgtggttgtactttgttatgttgactttcat |
6915193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 6914619 - 6914709
Alignment:
| Q |
50 |
ataatgaaatatacataatataatattattacctttcctttgaatcctaac-aggggaagaagacaatgattccttcaagatcctttataa |
139 |
Q |
| |
|
||||||||||||||||||||||||||||||| | || |||||||||||||| |||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
6914619 |
ataatgaaatatacataatataatattattatcatttctttgaatcctaacgtggggaagaagaccatgattccttcaagatattttataa |
6914709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 20731469 - 20731544
Alignment:
| Q |
274 |
ttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtattagttttccatct |
349 |
Q |
| |
|
|||||||||||| ||| ||||||| || | | ||||||||||||||||||||||| |||| ||||||||| ||||| |
|
|
| T |
20731469 |
ttggtaattcttagttatgtcaatcatatgtcatttatgtgcttcattatgtatgtcatgcattagtttttcatct |
20731544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 26359636 - 26359678
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttg |
91 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26359636 |
cataatgaaatatacataatataatattattaccattcctttg |
26359678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 375
Target Start/End: Original strand, 20731095 - 20731163
Alignment:
| Q |
306 |
atttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttactatg |
375 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||| ||||||||| || |||||||||||||||| ||||| |
|
|
| T |
20731095 |
atttatgtgcttcattatgcatgtcatgtattatttttccatccga-gagtgtggttgtactttgctatg |
20731163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 49 - 347
Target Start/End: Original strand, 11099429 - 11099737
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
11099429 |
cataatgaaatatacataatataatattattatcattcctttgaatcctaacaggggaagaagaccatgattccttcaaaatcctttataaagtgagaga |
11099528 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtgtgttga-----------aatttcattataaaggaagtggaaatttttggtgtggtt |
237 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||| |||||||| |
|
|
| T |
11099529 |
agtaacaagtttatatatttttt-tcttgaaagtgagagaagtgtgttgattgtgtgcaccgctcacaatataaaggaagtggaaattttttgtgtggtt |
11099627 |
T |
|
| Q |
238 |
aaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatgtatt |
337 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11099628 |
aaaattagcaatagcgaagccatatactttgacatcttggtaattcttggttatgccaatcatgtattatttatgtgcttcattatgtatgacatgtatt |
11099727 |
T |
|
| Q |
338 |
agttttccat |
347 |
Q |
| |
|
|||||||||| |
|
|
| T |
11099728 |
agttttccat |
11099737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 49 - 383
Target Start/End: Original strand, 1563398 - 1563743
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattacctttcctttgaatcctaacaggggaagaagacaatgattccttcaagatcctttataaagtgagaga |
148 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||| ||||||||| |||||| ||||| ||||||||||||||||| |||||||| | ||||| |
|
|
| T |
1563398 |
cataatgaaatataaataatataatattattaccactcctttcaatcctaacgggggaaaaagaccatgattccttcaagatcttttataaaatcagaga |
1563497 |
T |
|
| Q |
149 |
agtaacaagtttatatattttttctcttgaaagtgagagaagtg---tgttgaaattt------------cattataaaggaagtggaaatttttggtgt |
233 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| ||||||||||| || || | | || ||||||||||||||||||||||||||| |
|
|
| T |
1563498 |
agtaacaagtttatgtattttttttcttgaaaatgagagaagtgtggtggtgtacggtgtgcagtgctcacaatataaaggaagtggaaatttttggtgt |
1563597 |
T |
|
| Q |
234 |
ggttaaaattagcaatagcaaagccatatcctttgacatcttggtaattcttggttgtgtcaattatgtattatttatgtgcttcattatgtatgacatg |
333 |
Q |
| |
|
|||||| |||||||||| ||||||||||| || ||||||| |||||||||||||| || |||| || | | |||||||||||||||||||||||| ||| |
|
|
| T |
1563598 |
ggttaagattagcaataacaaagccatatatttcgacatctcggtaattcttggttatgccaatcatatgtcatttatgtgcttcattatgtatgatatg |
1563697 |
T |
|
| Q |
334 |
tattagttttccatctgacaagtgtggttgtactttactatgctgacttt |
383 |
Q |
| |
|
|||| ||||| || ||||| |||||| |||| ||||||||||||| |
|
|
| T |
1563698 |
cattacttttctatttgaca----gggttgttctttgctatgctgacttt |
1563743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 28538021 - 28538053
Alignment:
| Q |
49 |
cataatgaaatatacataatataatattattac |
81 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
28538021 |
cataatgaaatatacataatataatattattac |
28538053 |
T |
|
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Target: scaffold0113 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0113
Description:
Target: scaffold0113; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 69 - 278
Target Start/End: Original strand, 12819 - 13044
Alignment:
| Q |
69 |
ataatattattacctttcctttgaatcctaacagggg-aagaagacaatgattccttcaagatcctttataaagtgagagaagtaacaagtttatatatt |
167 |
Q |
| |
|
|||||||||||||| |||||||||||| |||| |||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| | || |
|
|
| T |
12819 |
ataatattattaccattcctttgaatcttaacggggggaagaagaccatgattccttcaagatcttttataaagtgagagaactaacaagtttatgtttt |
12918 |
T |
|
| Q |
168 |
ttttctcttgaaagtgagagaagtgtgttg----aaa-----------tttcattataaaggaagtggaaatttttggtgtggttaaaattagcaatagc |
252 |
Q |
| |
|
|||| ||||||||||||||||||||||||| | | | || |||||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
12919 |
ttttttcttgaaagtgagagaagtgtgttggtgtagagtgtgcagtgctcacaatataaaggaagtggaaattttttgtgtggttaaaattagcaataac |
13018 |
T |
|
| Q |
253 |
aaagccatatcctttgacatcttggt |
278 |
Q |
| |
|
|||||||||| |||||||||||||| |
|
|
| T |
13019 |
aaagccatatattttgacatcttggt |
13044 |
T |
|
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Target: scaffold0113; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 13062 - 13098
Alignment:
| Q |
306 |
atttatgtgcttcattatgtatgacatgtattagttt |
342 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
13062 |
atttatgtgcttcattatgtatgtcatgcattagttt |
13098 |
T |
|
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Target: scaffold0002 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 425078 - 425158
Alignment:
| Q |
306 |
atttatgtgcttcattatgtatgacatgtattagttttccatctgacaagtgtggttgtactttactatgctgactttcat |
386 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||| |||||||| |||| |||||||||| |||||||||||||||| |
|
|
| T |
425078 |
atttatgtgcttcattatgtatgtcatggattagttttcaatctgacaggtgttgttgtactttgctatgctgactttcat |
425158 |
T |
|
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