View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19016_high_14 (Length: 323)
Name: NF19016_high_14
Description: NF19016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19016_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 27136071 - 27135759
Alignment:
| Q |
1 |
aattataaatgattgaatataactacatgggtcaactcaatacgccttcaa-----aatgtcagtggtgcatagatatcattgattgaacaaaatggact |
95 |
Q |
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| T |
27136071 |
aattataaatgattgaatataactacatgggtcaactcaacacgccttcaatcagaagtgtcagtgctgcatagatatcattgattgaacaaaatggact |
27135972 |
T |
|
| Q |
96 |
ttattttgcgtccatgacatagatctgagcttagaatcttcgttagctaacaaagactacaaatttacatagactaagctaatcctaatttttcatgcca |
195 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
27135971 |
ttattttgcgtccatgatatagatctgagcttagaatcttcgttagctaacaaagactacaaatttacatagactaagctaattctaatttttcatgcca |
27135872 |
T |
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| Q |
196 |
acatttagaagtgtaaaaacaaaactaaatcaattgaagctaatcaagatctaggagaaatcactgtgaattgcaccaaaataacataatcaaggttcaa |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
27135871 |
acatttagaagtgtaaaaacaaaactaaatcaattgaagctaatcaagatctaggagaaatcactgagaattgcaccaaaataacataatcaaggttcaa |
27135772 |
T |
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| Q |
296 |
tttataatttttt |
308 |
Q |
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||||||||||||| |
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| T |
27135771 |
tttataatttttt |
27135759 |
T |
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