View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19016_high_15 (Length: 274)
Name: NF19016_high_15
Description: NF19016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19016_high_15 |
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Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 32460796 - 32461053
Alignment:
| Q |
1 |
aagtgaaatgaatataactaacttttatatctctaatatcaggaaccacagggaaatcgaaaggagtgatgcttactcatcgcaacttgacggcgacggt |
100 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32460796 |
aagtgaaatgaatataactagcttttatatctctaatatcaggaaccacagggaaatcgaaaggagtgatgcttactcatcgcaacttgacggcgacggt |
32460895 |
T |
|
| Q |
101 |
ggcggcatacaatgccgttaggattccgacggcgagtcctgcggtgtgtttgttaacagtgccgtgttttcacgtgtacggttttacgtaccttttgaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32460896 |
ggcggcatacaatgccgttaggattccgacggcgaatcctgcggtgtgtttgttaacagtgccgtgttttcacgtgtacggttttacgtaccttttgaag |
32460995 |
T |
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| Q |
201 |
ggtgtggctatgatggaaacggtggtgatgatggagaggtttgaattggggaaaatgt |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32460996 |
ggtgtggctatgatggaaacggtggtgatgatggagaggtttgaattggggaaaatgt |
32461053 |
T |
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