View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19017_high_22 (Length: 241)
Name: NF19017_high_22
Description: NF19017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19017_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 32544750 - 32544983
Alignment:
| Q |
1 |
ccatcacaggactgtataaacttctccagtagaagaggatggatactgactccttctctgagacaaacctgtaggtcattgacataatatataacattaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32544750 |
ccatcacaggactgtataaacttctccagtagaagaggatggatgctgactccttctctgagacaaacctgtaggtcattgacataatatataacattaa |
32544849 |
T |
|
| Q |
101 |
tactaatttggacaacaattttgctttattacttttgagggaggaagcaggaaagtcctcgtgcacatacagaagacaaatggcaaagcaactcctttgg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
32544850 |
tactaatttggacaacaattttgctttattacttttgagggaggaagcaggaaagtcctcgtgcacatacagagtacaaatggcaaagcaactcctttgg |
32544949 |
T |
|
| Q |
201 |
cgttggcaatgagaacgaaatatgaagcctatca |
234 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
32544950 |
tgttggcaatgagaacgaaatatgaagcctatca |
32544983 |
T |
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