View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19022_high_6 (Length: 380)
Name: NF19022_high_6
Description: NF19022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19022_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 24 - 362
Target Start/End: Complemental strand, 21550124 - 21549786
Alignment:
| Q |
24 |
ttcaaatggatacaacaatccatgtgaagaagaagcttctaaagttgacaagaagggaaattgatgagtttgtggcatcctccattgctcaaaactacca |
123 |
Q |
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| T |
21550124 |
ttcaaatggatacaacaatccatgtgaagaagaagcttctaaagttgacaagaagggaaattgatgagtttgtggcatcctccattgctcaaaattacta |
21550025 |
T |
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| Q |
124 |
acaggtaaaatcgaagaagaaccaccaccgttaccaacgcctccacctaacgagcttccgatatggaaatttaagtctccaacacctcccattggaccgg |
223 |
Q |
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| T |
21550024 |
acaggtaaaatcgaagcggaaccaccaccgttaccaacgcctccacctaaagagcttccgatatggaaatttaagtctccaacacctcccattggaccag |
21549925 |
T |
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| Q |
224 |
aaaaaccatagtttagtcctatttcactgaggtgatctccaagatgatgcaaaggagccatgaatctcatcggtggtggcgttggggaactgagtacggc |
323 |
Q |
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| T |
21549924 |
aaaaaccatagtttagtcctatttcactgaggtgatctccaagatgatgcaaaggagccatgaatctcatcggtggtggcgttggggaactgagtacggc |
21549825 |
T |
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| Q |
324 |
aggagagttgtttgtagagctagtttggcggtctgagct |
362 |
Q |
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| T |
21549824 |
aggagagttgtttgtagagctagtttggcggtctgagct |
21549786 |
T |
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