View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19025_low_3 (Length: 652)

Name: NF19025_low_3
Description: NF19025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19025_low_3
NF19025_low_3
[»] chr8 (30 HSPs)
chr8 (16-633)||(11136590-11137209)
chr8 (239-432)||(42435311-42435503)
chr8 (239-432)||(2999840-3000033)
chr8 (243-432)||(44353451-44353636)
chr8 (256-450)||(3846155-3846348)
chr8 (111-242)||(41266924-41267057)
chr8 (370-450)||(3817784-3817864)
chr8 (336-404)||(9633952-9634020)
chr8 (312-432)||(11383642-11383761)
chr8 (109-160)||(7597653-7597704)
chr8 (109-193)||(1292541-1292626)
chr8 (109-154)||(12702712-12702757)
chr8 (109-154)||(15212831-15212876)
chr8 (109-193)||(18655405-18655490)
chr8 (304-385)||(22976236-22976317)
chr8 (109-154)||(42498239-42498284)
chr8 (109-223)||(3231874-3231990)
chr8 (109-155)||(4162541-4162587)
chr8 (109-151)||(4283572-4283614)
chr8 (109-245)||(8965769-8965907)
chr8 (109-151)||(27811326-27811368)
chr8 (109-245)||(29796400-29796538)
chr8 (109-151)||(30143388-30143430)
chr8 (110-184)||(31218272-31218346)
chr8 (111-224)||(32902254-32902368)
chr8 (109-151)||(42435069-42435111)
chr8 (109-154)||(33352195-33352240)
chr8 (109-154)||(44353838-44353883)
chr8 (110-154)||(1746297-1746341)
chr8 (109-240)||(19491777-19491909)
[»] chr5 (33 HSPs)
chr5 (109-385)||(10054895-10055172)
chr5 (239-432)||(40146917-40147109)
chr5 (240-432)||(38746661-38746852)
chr5 (257-432)||(316421-316596)
chr5 (109-197)||(316764-316852)
chr5 (239-432)||(5057704-5057895)
chr5 (247-432)||(28277971-28278156)
chr5 (239-431)||(213125-213317)
chr5 (109-245)||(3325866-3326003)
chr5 (109-230)||(16452047-16452170)
chr5 (249-432)||(16642208-16642389)
chr5 (109-224)||(35616143-35616259)
chr5 (239-450)||(21205972-21206183)
chr5 (239-385)||(27015234-27015380)
chr5 (274-385)||(35615874-35615985)
chr5 (109-242)||(42310013-42310148)
chr5 (109-151)||(9049420-9049462)
chr5 (109-154)||(13239796-13239841)
chr5 (109-154)||(13488248-13488293)
chr5 (319-432)||(14689807-14689920)
chr5 (109-154)||(30683002-30683047)
chr5 (109-154)||(39468627-39468672)
chr5 (109-154)||(42428508-42428553)
chr5 (360-455)||(30792872-30792968)
chr5 (111-151)||(32576377-32576417)
chr5 (109-220)||(25412739-25412850)
chr5 (109-151)||(538073-538115)
chr5 (109-151)||(13695769-13695811)
chr5 (109-151)||(28278364-28278406)
chr5 (140-185)||(4160645-4160690)
chr5 (111-184)||(10700729-10700801)
chr5 (246-295)||(30802733-30802782)
chr5 (110-151)||(38747053-38747094)
[»] chr4 (57 HSPs)
chr4 (243-502)||(34112199-34112456)
chr4 (133-431)||(38811291-38811590)
chr4 (239-432)||(40630640-40630832)
chr4 (239-432)||(8665063-8665255)
chr4 (239-432)||(50263018-50263210)
chr4 (239-432)||(54882676-54882868)
chr4 (239-432)||(12073049-12073240)
chr4 (239-432)||(26363921-26364113)
chr4 (239-385)||(33089601-33089747)
chr4 (241-429)||(6655615-6655802)
chr4 (109-221)||(32091455-32091568)
chr4 (239-432)||(33989518-33989710)
chr4 (246-385)||(35662144-35662283)
chr4 (257-444)||(41961050-41961237)
chr4 (356-470)||(22629325-22629439)
chr4 (307-432)||(8653256-8653380)
chr4 (308-385)||(10071973-10072050)
chr4 (307-432)||(41964072-41964197)
chr4 (109-154)||(56178715-56178760)
chr4 (245-432)||(27417277-27417463)
chr4 (113-177)||(33089900-33089964)
chr4 (109-197)||(44570444-44570531)
chr4 (239-385)||(55085685-55085832)
chr4 (256-430)||(47514838-47515012)
chr4 (244-385)||(2209410-2209551)
chr4 (109-151)||(4588007-4588049)
chr4 (112-154)||(48143088-48143130)
chr4 (310-432)||(50674237-50674358)
chr4 (109-150)||(8648188-8648229)
chr4 (109-154)||(9927536-9927581)
chr4 (109-154)||(12119584-12119629)
chr4 (109-154)||(37740670-37740715)
chr4 (109-154)||(54199984-54200029)
chr4 (280-428)||(3785750-3785898)
chr4 (109-245)||(6677421-6677559)
chr4 (109-185)||(34788853-34788929)
chr4 (109-179)||(6655976-6656046)
chr4 (109-179)||(8665428-8665498)
chr4 (112-150)||(22882832-22882870)
chr4 (112-150)||(22934496-22934534)
chr4 (109-151)||(26699521-26699563)
chr4 (109-151)||(27417043-27417085)
chr4 (109-151)||(36463467-36463509)
chr4 (109-151)||(40632493-40632535)
chr4 (109-222)||(41961393-41961507)
chr4 (109-245)||(44967908-44968045)
chr4 (109-151)||(50262779-50262821)
chr4 (109-151)||(54883068-54883110)
chr4 (109-193)||(379385-379470)
chr4 (109-224)||(21703914-21704031)
chr4 (109-154)||(26364281-26364326)
chr4 (109-150)||(33989893-33989934)
chr4 (109-178)||(34112838-34112907)
chr4 (109-154)||(34570492-34570537)
chr4 (257-345)||(25723554-25723642)
chr4 (127-179)||(33706593-33706644)
chr4 (109-220)||(36994502-36994614)
[»] chr2 (23 HSPs)
chr2 (319-494)||(40935579-40935752)
chr2 (239-404)||(24397740-24397906)
chr2 (109-224)||(42261564-42261683)
chr2 (309-501)||(42261999-42262190)
chr2 (109-221)||(30218123-30218236)
chr2 (239-432)||(45726586-45726777)
chr2 (239-432)||(1632052-1632244)
chr2 (79-244)||(42019921-42020087)
chr2 (239-385)||(42288430-42288575)
chr2 (239-432)||(33647824-33648018)
chr2 (239-432)||(7450957-7451148)
chr2 (109-220)||(5723334-5723445)
chr2 (109-184)||(6595084-6595159)
chr2 (307-430)||(17450249-17450371)
chr2 (109-151)||(24398105-24398147)
chr2 (117-184)||(3897005-3897072)
chr2 (109-151)||(11049601-11049644)
chr2 (109-151)||(7815351-7815393)
chr2 (109-151)||(45726977-45727019)
chr2 (109-154)||(2334496-2334541)
chr2 (109-150)||(4561137-4561178)
chr2 (109-154)||(38312285-38312330)
chr2 (111-187)||(4484411-4484487)
[»] chr1 (42 HSPs)
chr1 (239-432)||(11348354-11348546)
chr1 (239-432)||(28242044-28242236)
chr1 (109-221)||(9109498-9109611)
chr1 (239-432)||(7482550-7482743)
chr1 (240-414)||(42298296-42298469)
chr1 (239-385)||(37033393-37033539)
chr1 (239-385)||(37167999-37168145)
chr1 (246-469)||(29135866-29136088)
chr1 (239-504)||(6808031-6808295)
chr1 (239-385)||(13547409-13547555)
chr1 (239-385)||(13549320-13549466)
chr1 (110-184)||(2926523-2926597)
chr1 (307-432)||(47255722-47255846)
chr1 (109-220)||(3156843-3156955)
chr1 (109-220)||(4552715-4552827)
chr1 (109-197)||(22079318-22079406)
chr1 (109-220)||(49918328-49918440)
chr1 (239-385)||(37879231-37879377)
chr1 (109-151)||(19752734-19752776)
chr1 (239-432)||(19754147-19754339)
chr1 (109-151)||(19754543-19754585)
chr1 (351-404)||(6068301-6068354)
chr1 (112-224)||(12318604-12318717)
chr1 (109-154)||(28220304-28220349)
chr1 (109-154)||(28223499-28223544)
chr1 (109-220)||(25652064-25652176)
chr1 (109-180)||(4535559-4535630)
chr1 (246-385)||(19752388-19752526)
chr1 (109-184)||(41135835-41135910)
chr1 (109-151)||(928054-928096)
chr1 (274-432)||(9109756-9109914)
chr1 (109-151)||(28265632-28265674)
chr1 (109-151)||(31659286-31659328)
chr1 (109-151)||(31925785-31925827)
chr1 (109-151)||(47255418-47255460)
chr1 (109-197)||(16914253-16914342)
chr1 (109-154)||(23555343-23555388)
chr1 (109-224)||(1050522-1050638)
chr1 (111-151)||(11348746-11348786)
chr1 (110-154)||(13316431-13316475)
chr1 (256-316)||(38747053-38747113)
chr1 (109-240)||(41360872-41361004)
[»] scaffold0466 (2 HSPs)
scaffold0466 (239-432)||(6984-7176)
scaffold0466 (109-151)||(7375-7417)
[»] chr7 (42 HSPs)
chr7 (239-432)||(34311036-34311229)
chr7 (239-432)||(4512710-4512901)
chr7 (271-432)||(5116290-5116451)
chr7 (109-231)||(1360229-1360354)
chr7 (239-432)||(2389938-2390130)
chr7 (239-432)||(6431627-6431819)
chr7 (239-450)||(22328718-22328931)
chr7 (117-245)||(26639273-26639402)
chr7 (283-432)||(32358199-32358348)
chr7 (308-432)||(29608397-29608520)
chr7 (239-432)||(2361291-2361483)
chr7 (245-432)||(3258651-3258838)
chr7 (109-220)||(47674021-47674133)
chr7 (245-432)||(22269630-22269815)
chr7 (304-379)||(22552822-22552897)
chr7 (109-151)||(1113705-1113747)
chr7 (110-242)||(48491534-48491668)
chr7 (308-432)||(6360301-6360424)
chr7 (109-154)||(27347862-27347907)
chr7 (239-331)||(4509026-4509117)
chr7 (239-331)||(4510868-4510959)
chr7 (109-220)||(31733047-31733159)
chr7 (113-185)||(43363556-43363628)
chr7 (352-432)||(48599757-48599836)
chr7 (109-184)||(23555055-23555130)
chr7 (110-153)||(48489477-48489520)
chr7 (109-151)||(2390330-2390372)
chr7 (109-151)||(6360030-6360072)
chr7 (109-151)||(6432019-6432061)
chr7 (109-151)||(22270021-22270063)
chr7 (109-151)||(30024810-30024852)
chr7 (109-151)||(32358132-32358174)
chr7 (169-245)||(3904756-3904833)
chr7 (352-429)||(4509130-4509206)
chr7 (352-429)||(4510972-4511048)
chr7 (109-154)||(18126689-18126734)
chr7 (110-151)||(22328470-22328511)
chr7 (109-154)||(35853959-35854004)
chr7 (109-150)||(36574594-36574635)
chr7 (109-154)||(43864289-43864334)
chr7 (109-150)||(47676214-47676255)
chr7 (352-432)||(30814421-30814500)
[»] chr3 (45 HSPs)
chr3 (241-430)||(1683146-1683334)
chr3 (240-432)||(43404054-43404245)
chr3 (245-432)||(28074273-28074458)
chr3 (239-432)||(40912994-40913187)
chr3 (234-432)||(43402105-43402302)
chr3 (239-450)||(46860108-46860319)
chr3 (239-432)||(49199791-49199983)
chr3 (239-432)||(54593360-54593553)
chr3 (239-385)||(6095919-6096065)
chr3 (239-385)||(30235827-30235973)
chr3 (239-432)||(34490869-34491061)
chr3 (239-502)||(4569538-4569799)
chr3 (239-385)||(41819842-41819987)
chr3 (109-151)||(2020187-2020229)
chr3 (109-202)||(8166535-8166628)
chr3 (246-385)||(47303954-47304093)
chr3 (109-220)||(45095142-45095253)
chr3 (352-450)||(36796044-36796142)
chr3 (110-245)||(1313884-1314021)
chr3 (109-154)||(5236534-5236579)
chr3 (109-154)||(7762310-7762355)
chr3 (110-179)||(20937676-20937745)
chr3 (112-193)||(26323155-26323236)
chr3 (109-154)||(29810913-29810958)
chr3 (109-193)||(46860479-46860564)
chr3 (117-197)||(3148077-3148157)
chr3 (111-179)||(24635277-24635345)
chr3 (109-220)||(35138784-35138896)
chr3 (389-455)||(25491229-25491295)
chr3 (396-504)||(5434355-5434462)
chr3 (109-151)||(30236173-30236215)
chr3 (109-151)||(46173405-46173447)
chr3 (132-224)||(1683450-1683543)
chr3 (109-154)||(7764509-7764554)
chr3 (109-154)||(19683967-19684012)
chr3 (109-154)||(29813108-29813153)
chr3 (467-504)||(34795454-34795491)
chr3 (109-154)||(37408503-37408548)
chr3 (109-150)||(44700556-44700597)
chr3 (109-154)||(51398859-51398904)
chr3 (110-154)||(5258223-5258267)
chr3 (110-154)||(5260402-5260446)
chr3 (109-177)||(25491046-25491114)
chr3 (360-432)||(26323953-26324025)
chr3 (109-220)||(40735361-40735473)
[»] chr6 (18 HSPs)
chr6 (234-455)||(2973254-2973476)
chr6 (239-468)||(3809028-3809258)
chr6 (239-432)||(5043284-5043475)
chr6 (241-432)||(21593322-21593512)
chr6 (352-504)||(25072770-25072921)
chr6 (109-220)||(5406278-5406389)
chr6 (109-220)||(5410603-5410714)
chr6 (109-220)||(4045401-4045513)
chr6 (109-220)||(9183109-9183221)
chr6 (109-185)||(31404753-31404829)
chr6 (109-220)||(5413472-5413583)
chr6 (109-151)||(603166-603208)
chr6 (109-179)||(2973017-2973087)
chr6 (109-151)||(17758071-17758113)
chr6 (109-151)||(21588979-21589021)
chr6 (109-151)||(21593712-21593754)
chr6 (109-193)||(5043632-5043717)
chr6 (110-154)||(30834615-30834659)
[»] scaffold0002 (3 HSPs)
scaffold0002 (109-224)||(490399-490518)
scaffold0002 (309-501)||(490834-491025)
scaffold0002 (109-154)||(434578-434623)
[»] scaffold0219 (1 HSPs)
scaffold0219 (109-245)||(27521-27659)
[»] scaffold0014 (1 HSPs)
scaffold0014 (239-432)||(80603-80795)
[»] scaffold0286 (1 HSPs)
scaffold0286 (241-429)||(11217-11404)
[»] scaffold0176 (1 HSPs)
scaffold0176 (239-385)||(18321-18467)
[»] scaffold0066 (1 HSPs)
scaffold0066 (109-154)||(20493-20538)
[»] scaffold0053 (1 HSPs)
scaffold0053 (109-150)||(25102-25143)
[»] scaffold1519 (1 HSPs)
scaffold1519 (110-154)||(961-1005)


Alignment Details
Target: chr8 (Bit Score: 461; Significance: 0; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 16 - 633
Target Start/End: Complemental strand, 11137209 - 11136590
Alignment:
Q  16 aacaacatcaaagaattctttaccttagttcgatccaacaatgacctactatgaggaggaatatctccaattcactatcaatgagnnnnnnnn-acaaag 114  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||    
T  11137209 aacaacatcaaagaattctttaccttagttcggtccaacaatgacctactatgaggaggaatatctccaattcactatcaatgagtttttttttacaaag 11137110  T
Q  115 agatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttccatgaaaaatagactcaa 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11137109 agatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcaatctcttccatgaaaaatagactcaa 11137010  T
Q  215 tgatttcacttaccaaaaatgtttacaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagc 314  Q
    |||    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11137009 tga----acttaccaaaaatgtttacaaatgactctccactcatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagc 11136914  T
Q  315 cctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatccttt 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11136913 cctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaaatctcatccttt 11136814  T
Q  415 agtttccatgagattcacaagctctcttaacaaatgtgtcagatgatgcttatatatagtgttcaaattcaagcaaaatcgtgtcacgatgaaactctcg 514  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||    
T  11136813 agtttccatgagattcacaagctctctcaacaaatgtgtcagatgatgctta--tatagtgttcaaattcaa-caaaatcgtgtcacgatgaaactctcg 11136717  T
Q  515 tatacaatattgtattacacatttatctaaaactcgtgttacgatttttacaatca---cacatttat-----ctaaaacacattcatattctattttgt 606  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||   |||| ||||     |  ||||||||||||||||| | || |    
T  11136716 tatataatattgtactacacatttatctaaaaatcgtgttacgatttttacaatcacaccacaattatgattccagaaacacattcatattctgtcttat 11136617  T
Q  607 attacaattttcaaattgtgtcacgat 633  Q
    ||||| ||||||||||||| |||||||    
T  11136616 attacgattttcaaattgtatcacgat 11136590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 432
Target Start/End: Original strand, 42435311 - 42435503
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||  ||| ||||| || |||| ||||| || |||||||||| || | |||  ||||| |||||||| ||||||| ||||||||| ||    
T  42435311 acaaaagactctccattcatatgtttcccaaccccatgaatct-tccccaaaagtcaccaacctttttcccaagagccccctcttttggttctccaagat 42435409  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   |||||||||| || |||||| |||||||||||||||||    
T  42435410 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagtttcctcctttggtttccatgagattcac 42435503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 432
Target Start/End: Original strand, 2999840 - 3000033
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaatt 338  Q
    |||| |||||||| || |||||||||  |  ||| ||||| || |||||||||| || | ||||  | |||||| ||| ||||||| ||||||||| |||    
T  2999840 acaattgactctctactcatgtgtttctcatccccatgaatctttccccaaaagacaccaaccatatcccaagaaccccctcttttggttctccaagatt 2999939  T
Q  339 catatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaag-tctcatcctttagtttccatgagattcac 432  Q
    || || | ||   ||||||  |||||||||||||| ||||||||||| | ||| ||||||||||| |||| |||||| ||||| |||||||||||    
T  2999940 cacatcttgaagctttgaacatcacccaaagaccctcaacctttagtatctaaattccctaaaagttctc-tcctttggtttctatgagattcac 3000033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 243 - 432
Target Start/End: Complemental strand, 44353636 - 44353451
Alignment:
Q  243 atgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaattcat 341  Q
    |||||||||||| |||||||||||| |||| ||||| || || |||||||||| | |||   ||| ||||||||| ||||||||||||||||| ||||      
T  44353636 atgactctccactcatgtgttttccaaccccatgaatct-tctccaaaaggcaccaaccctcttcacaagagccccctcttttagttctccaagattc-- 44353540  T
Q  342 atttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
     | | ||   ||| || ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| |||||||||||||||||    
T  44353539 -tcttgaagttttaaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccatgagattcac 44353451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 256 - 450
Target Start/End: Original strand, 3846155 - 3846348
Alignment:
Q  256 catgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatatttggacaatttg 355  Q
    ||||||||| || |||| ||||| ||||||||||||| || | ||   ||||||||||| || |||||| ||||| ||| ||||| |||  ||   ||||    
T  3846155 catgtgtttcccaaccccatgaatctctccccaaaagacaccaactcttttccaagagctct-tcttttggttcttcaagattcacattatgaacctttg 3846253  T
Q  356 aatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcacaagctctcttaacaaatg 450  Q
    |||||||| |||  |||| |||||||||||||  |||| |||| ||||| |  |||||| |||||||| | |||| ||||| |||| ||||||||    
T  3846254 aatctcactcaagaaccctcaacctttagtttcaaagtaccctgaaagttttctcctttggtttccataaaattctcaagccctctcaacaaatg 3846348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 41267057 - 41266924
Alignment:
Q  111 aaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacata-cttaatttctaccattttctcagtctcttcc-atgaaaaatag 208  Q
    ||||| ||||||||  |||| ||||||||||  ||||||||||||  ||| ||| | | ||||||||||||||||||||  ||||||| | ||| || ||    
T  41267057 aaagaaatacaaaagagttacaagaaattagtctcaacaagttctctaagaacaaaacctaatttctaccattttctcaaactcttcctaagaacaagag 41266958  T
Q  209 actcaatgatttcacttaccaaaaatgtttacaa 242  Q
    |||||||||||||||| ||| ||| | |||||||    
T  41266957 actcaatgatttcactcacccaaagtatttacaa 41266924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 450
Target Start/End: Original strand, 3817784 - 3817864
Alignment:
Q  370 acccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcacaagctctcttaacaaatg 450  Q
    |||| ||||||||||||| ||||| |||||||||| |  |||||| ||||||||||| ||| ||||| |||| ||||||||    
T  3817784 accctcaacctttagtttctaagtaccctaaaagttttctcctttggtttccatgagtttctcaagcgctctcaacaaatg 3817864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 9633952 - 9634020
Alignment:
Q  336 attcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagt 404  Q
    ||||| ||||||||| ||||||||||||||||||||   | ||||||||||| ||||||| ||||||||    
T  9633952 attcacatttggacactttgaatctcacccaaagacgttcgacctttagtttctaagttctctaaaagt 9634020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 432
Target Start/End: Complemental strand, 11383761 - 11383642
Alignment:
Q  312 agccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcc 411  Q
    ||||| ||||||| ||||||||| ||||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||    
T  11383761 agccccctcttttggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcc 11383663  T
Q  412 tttagtttccatgagattcac 432  Q
    ||| |||||||||||||||||    
T  11383662 tttggtttccatgagattcac 11383642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 7597704 - 7597653
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaag 160  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||| ||||    
T  7597704 acaaagagatacaaaaggattataagaaattagcttcaacaagctctccaag 7597653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 1292541 - 1292626
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctc 193  Q
    |||||||||||||||   |||| |||||||||||||||||||| ||   ||| ||| |||||||||||| ||||||||||| ||||    
T  1292541 acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaacttaatttctacccattttctcaatctc 1292626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 12702712 - 12702757
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||    
T  12702712 acaaagagacacaaaagggttacaagaaattagcttcaacaagttc 12702757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 15212876 - 15212831
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  15212876 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 15212831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 18655490 - 18655405
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctc 193  Q
    |||||||||||||||  ||||| |||||||||||||||||||| ||   ||| |||  ||||||||||| ||||||||||| ||||    
T  18655490 acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacccattttctcaatctc 18655405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 385
Target Start/End: Complemental strand, 22976317 - 22976236
Alignment:
Q  304 tttccaagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||||||||||||  ||||||| ||||||||| ||||| || | ||   |||||| ||||||||||||||| |||||||||||    
T  22976317 tttccaagagcctcctcttttggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 22976236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 42498284 - 42498239
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  42498284 acaaagaaatacaaaagggttacaagaaattagcttcaacaagttc 42498239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 3231874 - 3231990
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacata-cttaatttctaccattttctcagtctcttcc-atgaaaaat 206  Q
    |||||||||||||||| ||||| || ||||||||||||||||| ||   ||| ||| | | ||||||||||  |||||||| |||||||| | ||| ||     
T  3231874 acaaagagatacaaaatggttaaaaaaaattagcttcaacaagctcacgaagaacaaagcctaatttctacatttttctcaatctcttcctaagaacaag 3231973  T
Q  207 agactcaatgatttcac 223  Q
    ||||||||||| |||||    
T  3231974 agactcaatgaattcac 3231990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 4162587 - 4162541
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttct 155  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||    
T  4162587 acaaagagatacaaatgagttacaagaaattagcttcaacaagttct 4162541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 4283614 - 4283572
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  4283614 acaaagagatacaaatgggttacaagaaattagcttcaacaag 4283572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 8965769 - 8965907
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacata-cttaatttctaccattttctcagtctcttccatgaaaaata 207  Q
    ||||||||||| |||| ||||||||||||||| |||||||||  || | ||| ||| | | ||||||||||| ||||| || ||||  | ||||| || |    
T  8965769 acaaagagatataaaagggttataagaaattaacttcaacaaactcataaagaacaaaccctaatttctacctttttcccaatctcaccaatgaacaaga 8965868  T
Q  208 gactcaatga-tttcacttaccaaaaatgtttacaaatg 245  Q
     ||||||||| ||||||| ||| ||  ||||||||||||    
T  8965869 cactcaatgattttcactcacccaaggtgtttacaaatg 8965907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 27811368 - 27811326
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  27811368 acaaagagatacaaatgggttacaagaaattagcttcaacaag 27811326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 29796400 - 29796538
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacata-cttaatttctaccattttctcagtctcttc-catgaaaaat 206  Q
    ||||| || |||||||  |||| ||||||| |||||||||||||||| |||| ||| | ||| ||||||||  ||||| || ||||||| || ||| ||     
T  29796400 acaaataggtacaaaaatgttacaagaaatcagcttcaacaagttctccaagaacaaaccttgatttctactcttttcccaatctcttctcaagaacaag 29796499  T
Q  207 agactcaatgatttcacttaccaaaaatgtttacaaatg 245  Q
    ||||||||||| ||||||  || || || ||||||||||    
T  29796500 agactcaatgaattcactcgcccaagatatttacaaatg 29796538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 30143430 - 30143388
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  30143430 acaaagagatacaaatgggttacaagaaattagcttcaacaag 30143388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 31218346 - 31218272
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccatttt 184  Q
    ||||||||||||||| ||||| |||||||||||||  ||||||||   ||| |||  | ||||||||||||||||    
T  31218346 caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccatttt 31218272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 32902254 - 32902368
Alignment:
Q  111 aaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttc-catgaaaaataga 209  Q
    ||||||||||||||  |||| ||||||||||||||||||   ||| || | ||| || |||||||||||  ||| ||| |||| || |||||  || |||    
T  32902254 aaagagatacaaaaaagttacaagaaattagcttcaacagagtctccatgaacaaacataatttctacccatttatcaatctcctctcatgatcaagaga 32902353  T
Q  210 ctcaatgatttcact 224  Q
    |||||||||||||||    
T  32902354 ctcaatgatttcact 32902368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 42435069 - 42435111
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  42435069 acaaagagatacaaatgggttacaagaaattagcttcaacaag 42435111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 33352240 - 33352195
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||| ||||||||||||    
T  33352240 acaaagagatacaaatgggttacaagaaattaggttcaacaagttc 33352195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 44353883 - 44353838
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||   |||| |||||||||||||||||||||||    
T  44353883 acaaagagatacaaatgtgttacaagaaattagcttcaacaagttc 44353838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 1746297 - 1746341
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||||| ||||| |||||||||||||  ||||||||    
T  1746297 caaagagatacaaaagggttacaagaaattagctttgacaagttc 1746341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 19491777 - 19491909
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    |||||||||||||||  ||||| |||||||||| ||||||||| ||   ||| ||| || ||||||||| |||||||| || ||||  | ||||| || |    
T  19491777 acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttctacccattttcccaatctcaccaatgaacaaga 19491876  T
Q  208 gactcaatgatttcacttaccaaaaatgtttac 240  Q
     |||||||  ||||||| ||| || ||||||||    
T  19491877 cactcaatattttcactcacccaagatgtttac 19491909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 9e-44; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 109 - 385
Target Start/End: Original strand, 10054895 - 10055172
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctc-ttccatgaaaaata 207  Q
    |||||||||||||||| |||||||||||||||||||||||||  |||||||| ||| || |||||||||||  ||||||| |||| ||| ||||| ||||    
T  10054895 acaaagagatacaaaa-ggttataagaaattagcttcaacaaactcttcaagaacaaacataatttctacccatttctcaatctctttctatgaacaata 10054993  T
Q  208 gactcaatgatttcacttaccaaaaatg-tttacaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaattt 306  Q
    ||||||||||||||||  ||| |||||| ||| ||| |||||||| || ||||||||| || ||||  |||| ||||||||| |||||| | | |  ||     
T  10054994 gactcaatgatttcacccacccaaaatgttttccaattgactctctactcatgtgtttcccaaccccgtgaatctctccccataaggcaccaaacctttc 10055093  T
Q  307 ccaagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    |||||||||||||||||| ||||||||| ||||| || | ||   ||||||||||||||||| |||  ||| |||||||    
T  10055094 ccaagagccctctcttttggttctccaagattcacatcttgaagctttgaatctcacccaaaaaccttcaatctttagt 10055172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 40147109 - 40146917
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||| ||||| |||||||| ||||||| ||||||||| ||    
T  40147109 acaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaaccattttcccaagagccccctcttttggttctccaagat 40147011  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   |||||||||| ||||||||| |||||||||||||||||    
T  40147010 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaaaa-ccctaaaagtttcatcctttggtttccatgagattcac 40146917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 240 - 432
Target Start/End: Complemental strand, 38746852 - 38746661
Alignment:
Q  240 caaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaatt 338  Q
    ||||||||||||||| || |||||| || |||| ||||| || ||||||||||||| | |||  ||||  |||||||| ||||||| ||||||||| |||    
T  38746852 caaatgactctccactcacgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcttaagagccccctcttttggttctccaagatt 38746754  T
Q  339 catatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaag-tctcatcctttagtttccatgagattcac 432  Q
    || || | || | |||||| ||||||||||||||| ||||||||||| | |||   ||||||||| |||| |||||| |||||||||||||||||    
T  38746753 cacatcttgaaactttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttctc-tcctttggtttccatgagattcac 38746661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 257 - 432
Target Start/End: Complemental strand, 316596 - 316421
Alignment:
Q  257 atgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatatttggacaatttga 356  Q
    |||||||| || |||  ||||| |||||||||||||||| | |||   | |||||||||| | ||||| ||||||||| ||||| || | ||   |||||    
T  316596 atgtgtttcccaaccttatgaatctctccccaaaaggcaccaaccctctcccaagagcccccccttttggttctccaagattcacatcttgaagctttga 316497  T
Q  357 atctcacccaaagacccccaacctttagtttttaagttccctaaaag-tctcatcctttagtttccatgagattcac 432  Q
    | ||||||||||||||| ||||||||||| | ||||| |  |||||| |||| ||||||||||||||||||||||||    
T  316496 acctcacccaaagaccctcaacctttagtatctaagtacaataaaagttctc-tcctttagtttccatgagattcac 316421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 316852 - 316764
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttcc 197  Q
    |||||||||||||||| | ||| |||||||||||||||||||| ||| |||| ||| || ||||||||||| |||||||| ||| ||||    
T  316852 acaaagagatacaaaaggattacaagaaattagcttcaacaagctctccaagaacaaacctaatttctacctttttctcaatcttttcc 316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 5057895 - 5057704
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaattt-ccaagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| |||||||||||| |||| ||||| || ||||||||||||| | |||  ||| |||| ||||| ||||||| |||||| || ||    
T  5057895 acaaatgactctccactcatgtgttttccaaccccatgaatct-tccccaaaaggcaccaacctttttcccaaaagccc-ctcttttggttctcaaagat 5057798  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaag-tctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||  ||||||||||||||| ||||||||||| | |||   ||||||||| |||| |||||| |||||||||||||||||    
T  5057797 tcacatcttgaagctttgatcctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttctc-tcctttggtttccatgagattcac 5057704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 432
Target Start/End: Complemental strand, 28278156 - 28277971
Alignment:
Q  247 ctctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctc-tcttttagttctccaaaattcatatt 344  Q
    |||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  ||||| |||||||| | |||||| ||||||||| ||||| ||     
T  28278156 ctctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagcccccctcttttggttctccaagattcacatc 28278058  T
Q  345 tggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    | ||   |||||| |||| |||||||||| ||||||||||| | |||   |||||||||| || ||||||||||||| ||||||||||    
T  28278057 ttgaagctttgaacctcatccaaagaccctcaacctttagtatctaaaa-ccctaaaagtttcctcctttagtttccttgagattcac 28277971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 431
Target Start/End: Complemental strand, 213317 - 213125
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaa-a 336  Q
    ||||| |||||||||| ||||||||| || |||| ||||| || || |||||||||| | |||  ||||| |||||||| ||||||| ||||||| || |    
T  213317 acaaaagactctccactcatgtgtttcccaaccccatgaatct-tctccaaaaggcaccaacccttttcccaagagccccctcttttggttctcccaaga 213219  T
Q  337 ttcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattca 431  Q
    |||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| ||||||||||||||||    
T  213218 ttcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccatgagattca 213125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 3326003 - 3325866
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttcc-atgaaaaata 207  Q
    ||||||||||||| || ||||| |||||||||||||||||||| |||||||| ||| |  ||||||||||| |||| ||| | |||||| | ||| || |    
T  3326003 acaaagagatacacaatggttacaagaaattagcttcaacaagctcttcaagaacaaaactaatttctacctttttttcaatttcttcctaagaacaaga 3325904  T
Q  208 gactcaatgatttcacttaccaaaaatgtttacaaatg 245  Q
     || ||||| ||||||| ||| ||  ||||||||||||    
T  3325903 tacccaatggtttcactcacccaaggtgtttacaaatg 3325866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 16452170 - 16452047
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    |||||||||||||||  ||||| |||||||||||||||||||| ||   ||| ||| |||||||||||| |||||||  || |||| || ||||| || |    
T  16452170 acaaagagatacaaatgggttacaagaaattagcttcaacaagctcagaaagaacaaacttaatttctacccatttttccaatctcatcaatgaacaaga 16452071  T
Q  208 gactcaatgatt-tcacttaccaa 230  Q
     ||||||||||| |||||||||||    
T  16452070 cactcaatgattgtcacttaccaa 16452047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 432
Target Start/End: Original strand, 16642208 - 16642389
Alignment:
Q  249 ctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatatttgga 348  Q
    |||||| ||||||||| |  |||| ||||| || ||||||||||||| | |||  || |||||||||||||  ||| ||||| ||| |||||  | | ||    
T  16642208 ctccactcatgtgtttcctaaccccatgaatctgtccccaaaaggcaccaaccctttcccaagagccctct--tttggttcttcaagattcacttcttga 16642305  T
Q  349 caatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagt-ctcatcctttagtttccatgagattcac 432  Q
       |||||| ||||||||||||||  ||||||||||| | ||| | |||||||||| ||| |||||| |||||||||||||||||    
T  16642306 agctttgaacctcacccaaagaccatcaacctttagtatctaaataccctaaaagtgctc-tcctttggtttccatgagattcac 16642389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 35616259 - 35616143
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttcca-tgaaaaata 207  Q
    ||||||| |||||||| ||||| ||||||||| ||| ||| || ||| |||| ||| || ||||||||||   ||||||| ||||||||  |||| || |    
T  35616259 acaaagaaatacaaaagggttacaagaaattaacttaaacgagctctccaagaacaaacctaatttctactcatttctcaatctcttcccgtgaacaaga 35616160  T
Q  208 gactcaatgatttcact 224  Q
    |||||||||||||||||    
T  35616159 gactcaatgatttcact 35616143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 450
Target Start/End: Original strand, 21205972 - 21206183
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaatt 338  Q
    |||||||||||  ||| ||||||||| || |||| ||||||||||||  ||||| || | |||  || | |||| |||  |||||| |||||| || |||    
T  21205972 acaaatgactcctcactcatgtgtttcccaaccctatgaacctctccgaaaaagacaccaaccctttccaaagaaccccatcttttggttctctaagatt 21206071  T
Q  339 catatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcacaagctc 438  Q
    || |||||||||   ||||||||||  ||| ||||  ||| ||||  || ||||||||||||||  | | || | | |||||||||||||||||||| ||    
T  21206072 cacatttggacaccatgaatctcacttaaatacccttaacttttatcttctaagttccctaaaaaacccctcatatggtttccatgagattcacaagttc 21206171  T
Q  439 tcttaacaaatg 450  Q
    ||| | ||||||    
T  21206172 tctcagcaaatg 21206183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 385
Target Start/End: Complemental strand, 27015380 - 27015234
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| ||||  || ||||||||||||| | |||  |||| ||||||||| ||||||| ||||| ||| ||    
T  27015380 acaaaagactctccactcatgtgtttcccaaccccatgattct-tccccaaaaggcaccaacccttttcacaagagccccctcttttggttcttcaagat 27015282  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||| || | ||   |||||  ||||||||||||||| |||||||||||    
T  27015281 tcacatcttgaagctttgatcctcacccaaagaccctcaacctttagt 27015234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 274 - 385
Target Start/End: Complemental strand, 35615985 - 35615874
Alignment:
Q  274 atgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagaccc 373  Q
    ||||| ||||||||||||||||||  ||  || ||||||| || ||||||| ||||||||| ||||| || | ||   |||||| ||||| |||||||||    
T  35615985 atgaatctctccccaaaaggcatcacccctttcccaagagtcccctcttttggttctccaagattcacatcttgaagctttgaacctcactcaaagaccc 35615886  T
Q  374 ccaacctttagt 385  Q
     |||||||||||    
T  35615885 tcaacctttagt 35615874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 242
Target Start/End: Original strand, 42310013 - 42310148
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    ||||||||||||||||  |||| |||||||||||||||||||| ||   |||  || |||| ||||||| ||| ||||||| ||||  | ||||  || |    
T  42310013 acaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagatcaaacttgatttctacccaatttctcaatctcaccaatgagcaaga 42310112  T
Q  208 gactcaatga-tttcacttaccaaaaatgtttacaa 242  Q
     ||||||||| ||||||||||| |||||||||||||    
T  42310113 cactcaatgattttcacttacccaaaatgtttacaa 42310148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 9049420 - 9049462
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  9049420 acaaagagatacaaaatggttacaagaaattagcttcaacaag 9049462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 13239841 - 13239796
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||    
T  13239841 acaaagagatacaaaagagttacaagaaattagcttcaacaagttc 13239796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 13488293 - 13488248
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  13488293 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 13488248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 14689807 - 14689920
Alignment:
Q  319 tcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtt 418  Q
    |||||| ||||||||||||||| || | || | ||||||  |||| |||||||||  |||||| | | | ||| | |||||||||| |  ||||||||||    
T  14689807 tcttttggttctccaaaattcacatcttgaaactttgaacatcactcaaagacccttaaccttcactatctaaatgccctaaaagttttctcctttagtt 14689906  T
Q  419 tccatgagattcac 432  Q
    ||||||||||||||    
T  14689907 tccatgagattcac 14689920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 30683002 - 30683047
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  30683002 acaaagaaatacaaaagggttacaagaaattagcttcaacaagttc 30683047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 39468627 - 39468672
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  39468627 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 39468672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 42428508 - 42428553
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  42428508 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 42428553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 455
Target Start/End: Complemental strand, 30792968 - 30792872
Alignment:
Q  360 tcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattca-caagctctcttaacaaatgtgtca 455  Q
    ||||| |||||||| ||||||||||| | ||| | |||||||||| |  || ||| |||||||||||||||| ||||||  ||||||||||| ||||    
T  30792968 tcacctaaagaccctcaacctttagtatctaattaccctaaaagtttactcatttggtttccatgagattcaccaagcttacttaacaaatgggtca 30792872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 32576377 - 32576417
Alignment:
Q  111 aaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  32576377 aaagagatacaaaatggttataagtaattagcttcaacaag 32576417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 25412850 - 25412739
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttccatgaaaaatag 208  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||   ||| |||  | ||||||||||| ||||| || ||||  | ||||| || |     
T  25412850 acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttcccaatctcaccaatgaacaagac 25412751  T
Q  209 actcaatgattt 220  Q
    ||||||||||||    
T  25412750 actcaatgattt 25412739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 538115 - 538073
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  538115 acaaagagatacaaatgggttacaagaaattagcttcaacaag 538073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 13695769 - 13695811
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  13695769 acaaagagatacaaaagggttacaagaaattagctttaacaag 13695811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 28278406 - 28278364
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  28278406 acaaagagatacaaatgggttacaagaaattagcttcaacaag 28278364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 4160690 - 4160645
Alignment:
Q  140 agcttcaacaagttcttcaaggacatacttaatttctaccattttc 185  Q
    |||||||||||||||| |||| ||| || |||||||||||||||||    
T  4160690 agcttcaacaagttctccaagaacaaacctaatttctaccattttc 4160645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 10700729 - 10700801
Alignment:
Q  111 aaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccatttt 184  Q
    ||||||||||||||  |||||||||| |||||||||||||| |||  ||| ||| || ||||||||||| ||||    
T  10700729 aaagagatacaaaaatgttataagaa-ttagcttcaacaagctctctaagaacaaacctaatttctaccttttt 10700801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 30802782 - 30802733
Alignment:
Q  246 actctccacccatgtgttttcctacccaatgaacctctccccaaaaggca 295  Q
    ||||||||| |||||||||||  |||| ||||| ||||||||||||||||    
T  30802782 actctccactcatgtgttttctaaccccatgaatctctccccaaaaggca 30802733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 38747094 - 38747053
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    ||||||||||||||  ||||| ||||||||||||||||||||    
T  38747094 caaagagatacaaatgggttacaagaaattagcttcaacaag 38747053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 1e-30; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 243 - 502
Target Start/End: Complemental strand, 34112456 - 34112199
Alignment:
Q  243 atgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcata 342  Q
    |||||||||||| |||||||||||| ||||  ||||||||||||||||||||| | |||  |||| |||||||   |||||  ||| ||||| ||||| |    
T  34112456 atgactctccactcatgtgttttccaaccccgtgaacctctccccaaaaggcaccaacccttttctaagagcctcgtctttaggttatccaagattcaca 34112357  T
Q  343 tttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcacaagctctctt 442  Q
     ||||||| |||||||||||| ||||||||| ||| |||||||||  ||||| |||||||||    ||||||  ||| ||| | |||  | ||||| ||     
T  34112356 attggacattttgaatctcacacaaagaccctcaatctttagtttcaaagtttcctaaaagttatctcctttgattttcattatattatcgagctcactc 34112257  T
Q  443 aacaaatgtgtcagatgatgcttatatatagtgttcaaattcaagcaaaatcgtgtcacg 502  Q
    |||||||| |||| | ||||||  ||||| |||||||||| || ||||||||||||||||    
T  34112256 aacaaatgggtcaaaagatgct--tatattgtgttcaaatacaggcaaaatcgtgtcacg 34112199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 133 - 431
Target Start/End: Original strand, 38811291 - 38811590
Alignment:
Q  133 agaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttcc-atgaaaaatagactcaatgatttcacttaccaaa 231  Q
    ||||||||  ||||||||  ||| |||| ||| ||||||||| ||||  ||||||| |||||| | ||||| || |||||||||||||||||| ||| ||    
T  38811291 agaaattaaattcaacaaactctccaagaacaaacttaatttgtacccatttctcaatctctttctatgaacaagagactcaatgatttcactcacccaa 38811390  T
Q  232 aatgtttacaaat-gactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttct 330  Q
      ||||||| ||| ||||||||||  |||||||| |  |||  ||||| |||||| |||||| || | |||  || |||||||||| ||||||  |||||    
T  38811391 ggtgtttaccaattgactctccacttatgtgtttcctaacctcatgaatctctccgcaaaagacaccaaccctttcccaagagccc-ctctttgggttct 38811489  T
Q  331 ccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattc 430  Q
    |||| ||||| || |  |   |||||| |||||||||| |||| ||||||||||| | ||||| ||||||||||  | ||||||||||||||||||||||    
T  38811490 ccaagattcacatcttaaagctttgaacctcacccaaataccctcaacctttagtatctaagtaccctaaaagttccctcctttagtttccatgagattc 38811589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 40630832 - 40630640
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  |||| ||| ||| | ||||||| ||||||||| ||    
T  40630832 acaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcacaaaagctccctcttttggttctccaagat 40630734  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   |||||||||| ||||||||| |||||||||||||||||    
T  40630733 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaaaa-ccctaaaagtttcatcctttggtttccatgagattcac 40630640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 8665255 - 8665063
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| | ||||||| || |||| ||||| || ||||||||||||| | |||  ||||| |||||||| ||||||| ||||||||| ||    
T  8665255 acaaaagactctccactcctgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagat 8665157  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaag-tctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||| |||| |||||| |||||||||||||||||    
T  8665156 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttctc-tcctttggtttccatgagattcac 8665063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 432
Target Start/End: Original strand, 50263018 - 50263210
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaattt-ccaagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  ||| |||||||||| ||||||| ||||||||| ||    
T  50263018 acaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaaccctttttccaagagccccctcttttggttctccaagat 50263116  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||||||| | ||||||||||| | |||   ||||||||||  | |||||| |||| ||||||||||||    
T  50263117 tcacatcttgaagctttgaacctcacccaaagactctcaacctttagtgtctaa-aaccctaaaagttccctcctttggttttcatgagattcac 50263210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 54882868 - 54882676
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||| ||| ||||||||| || |||| ||||| || || |||||||||| | |||  ||||  |||||||| ||||||| ||||||||| ||    
T  54882868 acaaaagactctacactcatgtgtttcccaaccccatgaatct-tctccaaaaggcaccaacccttttcataagagccccctcttttggttctccaagat 54882770  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| |||| ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| |||||||||||||||||    
T  54882769 tcacattttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccatgagattcac 54882676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 12073240 - 12073049
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaattt--ccaagagccctctcttttagttctccaaaa 336  Q
    ||||| |||||| ||| |||||||||||| |||| |||||  ||| ||||||||||| | |||  |||  |||||||||| ||||||| ||||||||| |    
T  12073240 acaaaagactcttcactcatgtgttttccaaccccatgaa--tcttcccaaaaggcaccaaccctttttcccaagagccc-ctcttttggttctccaaga 12073144  T
Q  337 ttcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    || | || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  |||||||| |||||||||||||||||    
T  12073143 tttacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaaaa-ccctaaaagttccatcctttggtttccatgagattcac 12073049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 26364113 - 26363921
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| ||||||||| || |||| ||||| || || |||||||||  | |||  |||| ||||||||| ||||||| ||||||||| ||    
T  26364113 acaaatgactctccactcatgtgtttcccaaccccatgaatct-tctccaaaaggccccaacccttttcacaagagccccctcttttggttctccaagat 26364015  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||||| ||| ||||||||||| | |||   ||||||||||  | ||| || |||||||||||||||||    
T  26364014 tcacatcttgaagctttgaacctcacccaaaggccctcaacctttagtatctaa-aaccctaaaagttccctcccttggtttccatgagattcac 26363921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 385
Target Start/End: Complemental strand, 33089747 - 33089601
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaatt 338  Q
    |||||||||||||||| |||||||||| | |||| ||||| ||||| ||||||| || | |||   | |||||||||| |||||||  |||||||| |||    
T  33089747 acaaatgactctccactcatgtgtttttcgaccccatgaatctctctccaaaagacaccaaccctctcccaagagccccctcttttgattctccaagatt 33089648  T
Q  339 catatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    || || |  | | |||||| ||||||||||||||| ||| |||||||    
T  33089647 cacatcttcaaactttgaacctcacccaaagaccctcaatctttagt 33089601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 429
Target Start/End: Complemental strand, 6655802 - 6655615
Alignment:
Q  241 aaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaattc 339  Q
    |||||||||||||| ||||||||| || |||| ||||| || || |||||||||| | |||  || || |||||||| ||||||| ||||||||| ||||    
T  6655802 aaatgactctccactcatgtgtttcccaaccccatgaatct-tctccaaaaggcaccaaccctttccccaagagccccctcttttggttctccaagattc 6655704  T
Q  340 atatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagatt 429  Q
    | || |  |   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| ||||||||||||||    
T  6655703 acatcttaaagttttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccatgagatt 6655615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 32091568 - 32091455
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtc-tcttccatgaaaaata 207  Q
    ||||||||||||||||  |||| |||||||||| ||||||||  ||| |||| ||| || ||||||||| ||||||| || || ||| ||||||| || |    
T  32091568 acaaagagatacaaaagagttacaagaaattagtttcaacaaactctccaagaacaaacctaatttctagcattttcccaatcttctcccatgaacaaga 32091469  T
Q  208 gactcaatgatttc 221  Q
    ||||||||||||||    
T  32091468 gactcaatgatttc 32091455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 33989710 - 33989518
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaatt 338  Q
    |||||||||||||||| ||||||||| || | || ||||| ||||||| |||||||| | |||   | |||||||||| || |||| ||||| ||| |||    
T  33989710 acaaatgactctccactcatgtgtttcccaatcccatgaatctctccc-aaaaggcaccaaccttctcccaagagccccctattttggttcttcaagatt 33989612  T
Q  339 catatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    || || | ||   |||||| ||||||||||||||| ||| ||||||| | ||| | ||||||||||    | |||| |||||||||||||||||    
T  33989611 cacatcttgaagctttgaacctcacccaaagaccctcaaactttagtatctaaataccctaaaagttatctgctttggtttccatgagattcac 33989518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 35662283 - 35662144
Alignment:
Q  246 actctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaattcatatt 344  Q
    ||||||||  |||||||||||| |||| ||||| || ||||||||||||| | |||  ||||| |||||||| ||||||| ||||||||| ||||| ||     
T  35662283 actctccattcatgtgttttccaaccccatgaatct-tccccaaaaggcaccaacccttttcctaagagccccctcttttggttctccaagattcacata 35662185  T
Q  345 tggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    | ||   |||||| ||||||||||||| | |||||||||||    
T  35662184 ttgaagctttgaacctcacccaaagactctcaacctttagt 35662144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 257 - 444
Target Start/End: Complemental strand, 41961237 - 41961050
Alignment:
Q  257 atgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatatttggacaatttga 356  Q
    |||||||| || ||||| |||| |||||||||||| ||| |||||   | || ||||||| || |||  ||||| ||| ||||| ||||||||| |||||    
T  41961237 atgtgtttcccaaccca-tgaatctctccccaaaaagcaccgaccttctccctagagccccctttttcggttctacaagattcacatttggacactttga 41961139  T
Q  357 atctca-cccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcacaagctctcttaa 444  Q
    |||||| ||||||||||| || |||||||  |||| ||| | |||||||  | ||||||  ||| ||||| |||||||||||| |||||    
T  41961138 atctcaccccaaagaccctcaccctttagcctttatgtttcgtaaaagttccctcctttgattttcatgatattcacaagctcacttaa 41961050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 470
Target Start/End: Original strand, 22629325 - 22629439
Alignment:
Q  356 aatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctca-tcctttagtttccatgagattcacaagctctcttaacaaatgtgtc 454  Q
    ||||||||||| |||| |  |||||||||||| ||| || ||||||||| ||| || ||| ||||| ||||||||| ||||||| || |||||||| |||    
T  22629325 aatctcacccagagacactgaacctttagtttctaaatttcctaaaagt-tcactcatttggtttctatgagattctcaagctccctcaacaaatgagtc 22629423  T
Q  455 agatgatgcttatata 470  Q
    | ||||||||||||||    
T  22629424 aaatgatgcttatata 22629439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 432
Target Start/End: Complemental strand, 8653380 - 8653256
Alignment:
Q  307 ccaagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaag-tc 405  Q
    |||||||||| ||||||| ||||||||| ||||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||| ||    
T  8653380 ccaagagccccctcttttggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttc 8653282  T
Q  406 tcatcctttagtttccatgagattcac 432  Q
    || |||||| |||||||||||||||||    
T  8653281 tc-tcctttggtttccatgagattcac 8653256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 385
Target Start/End: Complemental strand, 10072050 - 10071973
Alignment:
Q  308 caagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||||||||| ||||||||||||||||| ||||| || | ||   |||||| ||||||||||||||| |||||||||||    
T  10072050 caagagccccctcttttagttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 10071973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 432
Target Start/End: Complemental strand, 41964197 - 41964072
Alignment:
Q  307 ccaagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtct 406  Q
    |||||||||| ||||||| ||||||||| ||||| ||   ||   |||||| ||||||||||||||| ||||||||||| | ||  | ||||||||||      
T  41964197 ccaagagccccctcttttggttctccaagattcacatcatgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagttc 41964098  T
Q  407 catcctttagtttccatgagattcac 432  Q
    | ||||||  ||||||||||||||||    
T  41964097 cctcctttgatttccatgagattcac 41964072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 56178715 - 56178760
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||    
T  56178715 acaaagagatacaaaagggttacaagaaattagcttcaacaagttc 56178760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 432
Target Start/End: Original strand, 27417277 - 27417463
Alignment:
Q  245 gactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaattcatat 343  Q
    |||||||||| ||||||||| || |||| ||||| || |||||||||| || | |||  ||||| ||||||||  |||||| ||||||||| ||||| ||    
T  27417277 gactctccactcatgtgtttcccaaccccatgaatct-tccccaaaagacaccaacccctttcccaagagccccttcttttggttctccaagattcacat 27417375  T
Q  344 ttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
     |  |   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| |||| ||||||||||||    
T  27417376 cttaaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggttttcatgagattcac 27417463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 33089964 - 33089900
Alignment:
Q  113 agagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta 177  Q
    |||||||||||| |||||||| ||||||||||||||||| ||| |||| ||| || |||||||||    
T  33089964 agagatacaaaatggttataataaattagcttcaacaagctctccaagaacaaacataatttcta 33089900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 44570444 - 44570531
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttcc 197  Q
    ||||||||||||||||  |||| |||||||||| ||||||||| ||| |||  ||| || |||||||||||||||| ||| ||||||||    
T  44570444 acaaagagatacaaaaatgttacaagaaattagtttcaacaagctctccaacaacaaacataatttctaccatttt-tcaatctcttcc 44570531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 385
Target Start/End: Original strand, 55085685 - 55085832
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatt-tccaagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  ||  |||||||||| ||||||| ||||||||| ||    
T  55085685 acaaatgactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaaccctttccccaagagccccctcttttggttctccaagat 55085783  T
Q  338 tcatat-ttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    | | || ||| |   ||| || ||||||||||||||| |||||||||||    
T  55085784 ttacatcttgaaagcttttaacctcacccaaagaccctcaacctttagt 55085832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 256 - 430
Target Start/End: Original strand, 47514838 - 47515012
Alignment:
Q  256 catgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatatttggacaatttg 355  Q
    ||||||||| || |||| ||| || | ||| |||||| |||| | || || ||||||| || ||||||| |||| |||| |||||||| | ||   ||||    
T  47514838 catgtgtttcccaaccctatgcacatttcctcaaaagacatcaatcatttcccaagagtccactcttttggttcaccaagattcatatcttgaagctttg 47514937  T
Q  356 aatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctca-tcctttagtttccatgagattc 430  Q
    ||  |||||| ||||||  ||||||||||| ||||||| |||||||||| ||| || ||| |||||||||||||||    
T  47514938 aacttcacccgaagaccttcaacctttagtgtttaagtaccctaaaagt-tcactcatttggtttccatgagattc 47515012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 385
Target Start/End: Complemental strand, 2209551 - 2209410
Alignment:
Q  244 tgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaattcata 342  Q
    ||||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  ||||| ||||| || ||| ||| ||||||||| ||||| |    
T  2209551 tgactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagtcccctcgtttggttctccaagattcaca 2209453  T
Q  343 tttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    | | ||   |||||| ||||||||||||||| ||| |||||||    
T  2209452 tcttgaagctttgaacctcacccaaagaccctcaatctttagt 2209410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 4588049 - 4588007
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  4588049 acaaagagatacaaaagggttacaagaaattagcttcaacaag 4588007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 48143130 - 48143088
Alignment:
Q  112 aagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  48143130 aagagatacaaaagggttacaagaaattagcttcaacaagttc 48143088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 432
Target Start/End: Original strand, 50674237 - 50674358
Alignment:
Q  310 agagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcat 409  Q
    ||||||| ||||||| ||||||||| ||||| || | ||   |||||| |||||||||||||||  ||| |||||| |||||   ||||||||||  | |    
T  50674237 agagccccctcttttggttctccaagattcacatcttgaagctttgaacctcacccaaagacccttaacatttagtatttaaaa-ccctaaaagttccct 50674335  T
Q  410 cctttagtttccatgagattcac 432  Q
    ||||| |||||||||||||||||    
T  50674336 cctttggtttccatgagattcac 50674358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 8648229 - 8648188
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaa 150  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  8648229 acaaagagatacaaatgggttataagaaattagcttcaacaa 8648188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 9927536 - 9927581
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  9927536 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 9927581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 12119629 - 12119584
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||    
T  12119629 acaaagagatacaaaagggttacaagaaattagcttcaaaaagttc 12119584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 37740715 - 37740670
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  37740715 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 37740670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 54199984 - 54200029
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  54199984 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 54200029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 428
Target Start/End: Complemental strand, 3785898 - 3785750
Alignment:
Q  280 ctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacc 379  Q
    |||||| ||||||||| | |||  ||||||||||||| ||||||| ||||| ||| ||||| || | ||   |||||||||| || |||||| | |||||    
T  3785898 ctctcctcaaaaggcaccaacccttttccaagagccccctcttttggttcttcaagattcacatcttgaagctttgaatctcgcctaaagactctcaacc 3785799  T
Q  380 tttagtttttaagttccctaaaagtctcatcctttagtttccatgagat 428  Q
    |||||| |  | ||  |||||||||  ||||||||  ||||||||||||    
T  3785798 tttagtatccatgtatcctaaaagttccatcctttgatttccatgagat 3785750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 6677559 - 6677421
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaag--gacatacttaatttctaccattttctcagtctctt-ccatgaaaaa 205  Q
    ||||||| |||||||| ||||| |||||||||||||||||||| ||| ||||   | | || ||||||||||||||||| || | |||| ||| ||| ||    
T  6677559 acaaagatatacaaaagggttacaagaaattagcttcaacaagctctccaagaaaaaaaacctaatttctaccattttc-caatttcttcccaagaacaa 6677461  T
Q  206 tagactcaatgatttcacttaccaaaaatgtttacaaatg 245  Q
     ||||||||| |||||||| | | ||  ||||||||||||    
T  6677460 gagactcaattatttcactcatccaatgtgtttacaaatg 6677421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 34788853 - 34788929
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttc 185  Q
    ||||||||||||||||  |||| ||||||||| |||||||||| ||| ||||  ||  | |||||||||||||||||    
T  34788853 acaaagagatacaaaagagttacaagaaattaacttcaacaagctctccaagagcaatcctaatttctaccattttc 34788929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 6656046 - 6655976
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctacc 179  Q
    |||||||||||||||   |||| |||||||||||||||||||||||   ||| |||  |||||||||||||    
T  6656046 acaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaaccttaatttctacc 6655976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 8665498 - 8665428
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctacc 179  Q
    |||||||||||||||  ||||| |||||||||||||||||||| |||  ||| |||  | |||||||||||    
T  8665498 acaaagagatacaaatgggttacaagaaattagcttcaacaagctctcaaagaacaaccctaatttctacc 8665428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 150
Target Start/End: Original strand, 22882832 - 22882870
Alignment:
Q  112 aagagatacaaaacggttataagaaattagcttcaacaa 150  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  22882832 aagagatacaaaagggttacaagaaattagcttcaacaa 22882870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 150
Target Start/End: Original strand, 22934496 - 22934534
Alignment:
Q  112 aagagatacaaaacggttataagaaattagcttcaacaa 150  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  22934496 aagagatacaaaagggttacaagaaattagcttcaacaa 22934534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 26699521 - 26699563
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  26699521 acaaagagatacaaaagagttacaagaaattagcttcaacaag 26699563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 27417043 - 27417085
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  27417043 acaaagagatacaaatgggttacaagaaattagcttcaacaag 27417085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 36463467 - 36463509
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  36463467 acaaagagatacaaatgggttacaagaaattagcttcaacaag 36463509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 40632535 - 40632493
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  40632535 acaaagagatacaaataggttacaagaaattagcttcaacaag 40632493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 222
Target Start/End: Complemental strand, 41961507 - 41961393
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttc-catgaaaaata 207  Q
    |||||||||||||||| | ||| |||||||||||   | |||| ||| || | ||| |||||||||||||  ||||  || ||||||| |||||| || |    
T  41961507 acaaagagatacaaaatgattacaagaaattagcactaccaagctctccatgaacaaacttaatttctactctttttccaatctcttctcatgaacaaga 41961408  T
Q  208 gactcaatgatttca 222  Q
    |||||||||||||||    
T  41961407 gactcaatgatttca 41961393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 44967908 - 44968045
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacata-cttaatttctaccattttctcagtctctt-ccatgaaaaat 206  Q
    |||||||||||||||  ||||| |||||||| |||||| |||| ||| ||||  || | | ||||||||||||||||| || |||||| ||| ||| ||     
T  44967908 acaaagagatacaaat-ggttacaagaaattggcttcagcaagctctccaagagcaaaacctaatttctaccattttcccaatctcttcccaagaacaac 44968006  T
Q  207 agactcaatgatttcacttaccaaaaatgtttacaaatg 245  Q
    || ||||||||||||||| | | ||  ||||||||||||    
T  44968007 aggctcaatgatttcactcaaccaatttgtttacaaatg 44968045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 50262779 - 50262821
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  50262779 acaaagagatacaaatgggttacaagaaattagcttcaacaag 50262821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 54883110 - 54883068
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  54883110 acaaagagatacaaatgggttacaagaaattagcttcaacaag 54883068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 379470 - 379385
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctc 193  Q
    |||||| ||||||||  ||||| |||||||||||||||||||| ||   ||| ||| || ||||||||| ||||||||||| ||||    
T  379470 acaaagcgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccattttctcaatctc 379385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 21703914 - 21704031
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacata-cttaatttctaccattttctcagtctctt-ccatgaaaaat 206  Q
    ||||| |||||||||| || || ||||||| | |||||||||| | |  ||| ||| | | ||||||||||| |||||||| |||||| ||| ||| |||    
T  21703914 acaaaaagatacaaaaagggtacaagaaatcatcttcaacaagctttctaagaacaaaacctaatttctacctttttctcaatctcttcccaagaacaat 21704013  T
Q  207 agactcaatgatttcact 224  Q
    ||||| ||||||||||||    
T  21704014 agacttaatgatttcact 21704031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 26364326 - 26364281
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||   |||| |||||||||||||||||||||||    
T  26364326 acaaagagatacaaatgagttacaagaaattagcttcaacaagttc 26364281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 33989934 - 33989893
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaa 150  Q
    |||||||||||||||| | ||| |||||||||||||||||||    
T  33989934 acaaagagatacaaaaggattacaagaaattagcttcaacaa 33989893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 34112907 - 34112838
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctac 178  Q
    |||||||||| ||||| ||||| | |||||||||||||||||| ||| | || ||| || ||||||||||    
T  34112907 acaaagagatgcaaaagggttacatgaaattagcttcaacaagctctcctagaacaaacataatttctac 34112838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 34570492 - 34570537
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||||   ||||| |||||||||||||||||||||||    
T  34570492 acaaagagatacaattgggttacaagaaattagcttcaacaagttc 34570537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 257 - 345
Target Start/End: Original strand, 25723554 - 25723642
Alignment:
Q  257 atgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatattt 345  Q
    |||||||| || |||| | ||| ||||| |||||||||||  |||| | ||||||||| | ||||||| ||||||||| ||||| ||||    
T  25723554 atgtgtttcccaaccccacgaagctctctccaaaaggcattaaccattatccaagagctccctcttttggttctccaagattcacattt 25723642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 33706593 - 33706644
Alignment:
Q  127 gttataagaaattagcttcaacaagttcttcaaggacatacttaatttctacc 179  Q
    ||||||||||||||||||||||||| || |||| || | ||||||||||||||    
T  33706593 gttataagaaattagcttcaacaagatc-tcaatgaaaaacttaatttctacc 33706644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 36994614 - 36994502
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    |||||| ||||||||  ||||| |||||||||||||||||||| ||   ||| |||  ||||||||||| |||||||| || ||||  | ||||| || |    
T  36994614 acaaagggatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacccattttcccaatctcaccaatgaacaaga 36994515  T
Q  208 gactcaatgattt 220  Q
     ||||||||||||    
T  36994514 cactcaatgattt 36994502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 8e-29; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 494
Target Start/End: Original strand, 40935579 - 40935752
Alignment:
Q  319 tcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaa-agtctcatcctttagt 417  Q
    |||||| ||||||| | ||||| ||||||||| |||||||||| ||||||| ||| ||||||||||||| |||||||||||||  ||||| |||||| ||    
T  40935579 tcttttggttctcctagattcacatttggacactttgaatctctcccaaaggccctcaacctttagtttctaagttccctaaacggtctc-tcctttggt 40935677  T
Q  418 ttccatgagattcacaagctctcttaacaaatgtgtcagatgatgcttatatatagtgttcaaattcaagcaaaatc 494  Q
    |||||||||||||  ||| ||||| |||||||| || | ||||||||  ||||||||||||| || || ||||||||    
T  40935678 ttccatgagattcttaagttctctcaacaaatgggtaaaatgatgct--tatatagtgttcagatccatgcaaaatc 40935752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 404
Target Start/End: Complemental strand, 24397906 - 24397740
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| ||||||||| ||  ||| ||||  ||||||| |||||||| | |||  ||||| |||||||| ||||||| ||||||||| ||    
T  24397906 acaaatgactctccactcatgtgtttaccagcccgatgagtctctccctaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagat 24397807  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagt 404  Q
    ||| |||| ||   |||||| ||||| ||||||||  ||||||||||| | ||| | ||||||||||    
T  24397806 tcacattttgaagctttgaacctcacacaaagaccgtcaacctttagtatctaaataccctaaaagt 24397740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 42261564 - 42261683
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtct----cttccatgaaaa 204  Q
    ||||||| ||||||||  |||| |||||||||||||||||||| ||| |||| ||| ||||||||||||| ||||||||| |||    ||| |||||| |    
T  42261564 acaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacttaatttctacgattttctcaatctcctcctttcatgaaca 42261663  T
Q  205 atagactcaatgatttcact 224  Q
    | ||||||||||| ||||||    
T  42261664 agagactcaatgagttcact 42261683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 501
Target Start/End: Original strand, 42261999 - 42262190
Alignment:
Q  309 aagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctca 408  Q
    |||||||| || |||| ||||||||| ||||| || | ||   |||||| ||||||||||||||| ||||||||||| | ||  | |||||||||   |     
T  42261999 aagagcccccttttttggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagctccc 42262098  T
Q  409 tcctttagtttccatgagattcac-aagctctcttaacaaatgtgtcagatgatgcttatatatagtgttcaaattcaagcaaaatcgtgtcac 501  Q
    |||||| |||  |||||||||||| |||||  || |||||||| |||| | ||||||||||  ||||||||| || ||||||||||||||||||    
T  42262099 tcctttggttctcatgagattcaccaagcttgctcaacaaatgggtcaaaggatgcttata--tagtgttcagatccaagcaaaatcgtgtcac 42262190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 30218123 - 30218236
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtct-cttccatgaaaaata 207  Q
    |||||||||||||||| ||||| |||||||||||||||| ||| ||| |||| ||| || ||| |||||||  ||||||| ||| |||||||||| || |    
T  30218123 acaaagagatacaaaatggttacaagaaattagcttcaataagctctccaagaacaaacctaacttctacccatttctcaatctccttccatgaacaaga 30218222  T
Q  208 gactcaatgatttc 221  Q
     |||||||||||||    
T  30218223 cactcaatgatttc 30218236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 45726777 - 45726586
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaatt 338  Q
    |||||||||||||||| ||||||||| |  |||| ||||| || ||||||||||||| | |||  || |||||||| | ||||||| ||||||||| |||    
T  45726777 acaaatgactctccactcatgtgtttccaaaccccatgaatct-tccccaaaaggcaccaaccctttcccaagagctccctcttttggttctccaagatt 45726679  T
Q  339 catatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    || || | ||   |||||| ||||||||||||| | ||||||||||| | |||   ||||||||||  | || ||| |||||||||||||||||    
T  45726678 cacatcttgaagctttgaacctcacccaaagactctcaacctttagtatctaa-aaccctaaaagttccctcatttggtttccatgagattcac 45726586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 432
Target Start/End: Original strand, 1632052 - 1632244
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| ||||| || |||||||||| || | |||  |||| ||||||||| ||||||| |||| |||| ||    
T  1632052 acaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaaagacaccaacccttttcacaagagccccctcttttggttccccaagat 1632150  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||| ||||||||| ||||||||||| | |||   ||||||||||  | |||||| |||||||||||||||||    
T  1632151 tcacatcttgaagctttgaacctcactcaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccatgagattcac 1632244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 79 - 244
Target Start/End: Original strand, 42019921 - 42020087
Alignment:
Q  79 tctccaattcactatcaatgagnnnnnnnnacaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctac 178  Q
    |||| |||||||||||||||||        ||||||||||||||||  |||| |||||||||||||| ||||| | |  ||| ||| || ||| ||||||    
T  42019921 tctcaaattcactatcaatgagttttttttacaaagagatacaaaagagttacaagaaattagcttctacaagctttataagaacaaacataaattctac 42020020  T
Q  179 cattttctcagtctcttcc-atgaaaaatagactcaatgatttcacttaccaaaaatgtttacaaat 244  Q
    | ||||   | |||||||| | ||||||||||||||||||||||||| ||| |  ||||||||||||    
T  42020021 cctttttctaatctcttcccaagaaaaatagactcaatgatttcactcacccacgatgtttacaaat 42020087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 239 - 385
Target Start/End: Original strand, 42288430 - 42288575
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| |||||  ||| ||||||||||| | |||  ||||| |||||||| ||||||| ||||| ||| ||    
T  42288430 acaaaagactctccactcatgtgtttcccaaccccatgaa--tcttcccaaaaggcaccaacccttttcccaagagccccctcttttggttcttcaagat 42288527  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||| || | ||   |||||| ||||||||||||||| |||||||||||    
T  42288528 tcacatcttgaagttttgaacctcacccaaagaccctcaacctttagt 42288575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 33648018 - 33647824
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||||||||||| || ||| |||||||| |||   |||| |||||| ||||||||| | |||  ||||| |||||||  |||||||  |||||||| ||    
T  33648018 acaaatgactctctactcatatgttttccaacctcgtgaatctctcctcaaaaggcaccaacccttttcccaagagcctcctcttttgattctccaagat 33647919  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaag-tctcatcctttagtttccatgagattcac 432  Q
    ||| || | || | |||||| ||||||||||||||  ||||||||||| | ||| | | ||||||| |||| |||||| |||||||||| ||||||    
T  33647918 tcacatcttgaaactttgaacctcacccaaagaccttcaacctttagtatctaaatactctaaaagttctc-tcctttggtttccatgaaattcac 33647824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 7451148 - 7450957
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| |||||||||||| |||| || || || || ||||||| |||| |||  || || |||||||| ||||||| ||||||||| ||    
T  7451148 acaaatgactctccactcatgtgttttccaaccccataaatct-tctccaaaagtcatcaaccctttaccaaagagccccctcttttggttctccaagat 7451050  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| ||   ||   |||||| |||||||||||| | |||||||||||| | |||   ||||||||||  | |||||| |||||||||||||||||    
T  7451049 tcacatcctgaagctttgaacctcacccaaaga-cgccaacctttagtatctaa-aaccctaaaagttccctccttttgtttccatgagattcac 7450957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 5723334 - 5723445
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttccatgaaaaatag 208  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||   ||| |||  | ||||||||||| |||||||| ||||  | ||||| || |     
T  5723334 acaaagagatacaaaaaggttacaagaaattagctttgacaagttcacaaagaacaagcctaatttctacccttttctcaatctcaccaatgaacaagac 5723433  T
Q  209 actcaatgattt 220  Q
    ||||||||||||    
T  5723434 actcaatgattt 5723445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 6595084 - 6595159
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccatttt 184  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||||   ||| |||  | ||||||||||||||||    
T  6595084 acaaagagattcaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctaccatttt 6595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 430
Target Start/End: Complemental strand, 17450371 - 17450249
Alignment:
Q  307 ccaagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtct 406  Q
    |||||||||| ||||||| ||||||||| ||||| || | ||   |||||| ||||| ||||||||| ||||||||||| | |||   ||||||||||      
T  17450371 ccaagagccccctcttttggttctccaagattcacatcttgaagctttgaacctcactcaaagaccctcaacctttagtatctaa-aaccctaaaagttc 17450273  T
Q  407 catcctttagtttccatgagattc 430  Q
    | |||||| |||||||||||||||    
T  17450272 cctcctttggtttccatgagattc 17450249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 24398147 - 24398105
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  24398147 acaaagagatacaaaagggttacaagaaattagcttcaacaag 24398105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 3897072 - 3897005
Alignment:
Q  117 atacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccatttt 184  Q
    ||||||||  |||| || |||||||||||||| ||||||||||| |||  ||||||||||| ||||||    
T  3897072 atacaaaagagttacaaaaaattagcttcaacgagttcttcaagaacaatcttaatttctatcatttt 3897005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 11049644 - 11049601
Alignment:
Q  109 acaaagagatac-aaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||| |||| ||||||||||||||||||||||||||    
T  11049644 acaaagagatactaaaagggttataagaaattagcttcaacaag 11049601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 7815351 - 7815393
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  7815351 acaaagagatacaaaagagttacaagaaattagcttcaacaag 7815393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 45727019 - 45726977
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  45727019 acaaagagatacaaataggttacaagaaattagcttcaacaag 45726977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 2334496 - 2334541
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||||||  ||||  ||||||||||||||||||||||    
T  2334496 acaaagagatacaaaagagttactagaaattagcttcaacaagttc 2334541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 4561178 - 4561137
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaa 150  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  4561178 acaaagagatacaaaaatgttacaagaaattagcttcaacaa 4561137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 38312330 - 38312285
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||| ||||||||||||    
T  38312330 acaaagagatacaaatgggttacaagaaattagtttcaacaagttc 38312285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 4484411 - 4484487
Alignment:
Q  111 aaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctc 187  Q
    |||||||||||||| ||||| |||||||||||||  ||||||||   ||| |||  | ||||||||||| |||||||    
T  4484411 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttctc 4484487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 5e-27; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 11348546 - 11348354
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatc-gaccaatttccaagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| |||||||||||| |||| ||||| || || |||||||||| | ||||  || |||||||||| ||||||| ||||||||| ||    
T  11348546 acaaatgactctccactcatgtgttttccaaccccatgaatct-tctccaaaaggcaccagaccttttcccaagagccccctcttttggttctccaagat 11348448  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | || | |||||| ||||||||||||||| ||||| ||||| | |||   ||||||||||  |||||||| |||||||||||||||||    
T  11348447 tcacatcttgaaactttgaacctcacccaaagaccctcaacccttagtatctaa-aaccctaaaagttccatcctttggtttccatgagattcac 11348354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 28242236 - 28242044
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| ||||||||| || |||  |||||  ||| ||||||||||| | |||  ||||| |||||||| ||||||| ||||||||| ||    
T  28242236 acaaatgactctccactcatgtgtttcccaaccttatgaa--tcttcccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagat 28242139  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| |||| ||   |||||| ||||||||||||||| ||||||||||| | ||  | ||||||||||  | |||||| |||| ||||||||||||    
T  28242138 tcacattttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagttccctcctttggttttcatgagattcac 28242044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 9109498 - 9109611
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtct-cttccatgaaaaata 207  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||||| |||| | | ||||||||||| ||||||||||| ||| || ||||||| || |    
T  9109498 acaaagagatacaaaagggttacaagaaattaacttcaacaagttctccaagtaaaaacttaatttcttccattttctcaatctcctaccatgaacaaga 9109597  T
Q  208 gactcaatgatttc 221  Q
     |||||| ||||||    
T  9109598 cactcaaggatttc 9109611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 239 - 432
Target Start/End: Original strand, 7482550 - 7482743
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctc-tcttttagttctccaaaa 336  Q
    ||||| |||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  ||||| |||||||| | |||||| ||||||||| |    
T  7482550 acaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagcccccctcttttggttctccaaga 7482648  T
Q  337 ttcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    |||| || | ||   |||||| ||||||||||||||| ||||| ||||| | |||   |||||||||| || |||||| |||||||||||||||||    
T  7482649 ttcacatcttgaagctttgaacctcacccaaagaccctcaaccgttagtatctaaaa-ccctaaaagtttcctcctttggtttccatgagattcac 7482743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 240 - 414
Target Start/End: Original strand, 42298296 - 42298469
Alignment:
Q  240 caaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaatt 338  Q
    ||||||||||||||| ||||||||| || |||| ||||| || || |||||||||| | |||  |||| ||||||||| ||||||| ||||||||| |||    
T  42298296 caaatgactctccactcatgtgtttcccaaccccatgaatct-tctccaaaaggcaccaacccttttcacaagagccccctcttttggttctccaagatt 42298394  T
Q  339 catatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatccttt 414  Q
    || || | ||   |||||| ||||||||||||||| ||||||||||| | |||   |||||||||| |||||||||    
T  42298395 cacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagtttcatccttt 42298469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 385
Target Start/End: Original strand, 37033393 - 37033539
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| ||||||||| || |||  ||||| || ||| ||||||||| | |||  ||||| |||||||| ||||||| ||||||||| ||    
T  37033393 acaaatgactctccactcatgtgtttcccaacctcatgaatct-tcctcaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagat 37033491  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||| || | ||   |||||| ||||||||||||||| |||||||||||    
T  37033492 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 37033539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 385
Target Start/End: Complemental strand, 37168145 - 37167999
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  ||||| |||||||| ||||||| ||||||||| ||    
T  37168145 acaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagat 37168047  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||| || | ||   |||||| |||||||||| |||| |||||||||||    
T  37168046 tcacatcttgaagctttgaacctcacccaaaaaccctcaacctttagt 37167999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 246 - 469
Target Start/End: Complemental strand, 29136088 - 29135866
Alignment:
Q  246 actctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaattcatatt 344  Q
    ||||||||| ||||| |||||| |||| ||||| || ||||||||||||| | |||  ||||| ||||| || ||||||| ||||||||| ||||| ||     
T  29136088 actctccactcatgt-ttttccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagtcccctcttttggttctccaagattcacatc 29135991  T
Q  345 tggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattca-caagctctctta 443  Q
    | ||   |||||| ||||| ||||||||| ||||||||||| | |||   ||||||||||  | |||||| |||||||||||||||| ||||||  || |    
T  29135990 ttgaagctttgaacctcactcaaagaccctcaacctttagtatctaaaa-ccctaaaagttccctcctttggtttccatgagattcaccaagcttactca 29135892  T
Q  444 acaaatgtgtcagatgatgcttatat 469  Q
    ||||||| |||| |  ||||||||||    
T  29135891 acaaatgggtcaaagaatgcttatat 29135866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 239 - 504
Target Start/End: Complemental strand, 6808295 - 6808031
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaatt 338  Q
    |||||||||||| ||  |||||||||||| |||| ||||| |||| |||||||| || | |    | |||||||||||  |||||| ||||||||| |||    
T  6808295 acaaatgactcttcattcatgtgttttccaaccccatgaatctcttcccaaaagaca-caaaatctctccaagagcccaatcttttggttctccaagatt 6808197  T
Q  339 catatttggacaatttgaatctcacccaaagacccc-caacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattca-caagc 436  Q
    || || | ||   |||||| |||||| ||||||||| ||||||||||| | |||     |||||||| || |||||| |||||||||||||||| |||||    
T  6808196 cacatcttgaagttttgaacctcacctaaagacccctcaacctttagtatctaaaaaatctaaaagtttcctcctttggtttccatgagattcaccaagc 6808097  T
Q  437 tctcttaacaaatgtgtcagatgatgcttatatatagtgttcaaattcaagcaaaatcgtgtcacgat 504  Q
    |  || |||||||| | || ||||| ||  |||||| |||||| || || |||||||| |||||||||    
T  6808096 ttactcaacaaatgagccaaatgatact--tatatactgttcagatccaggcaaaatcttgtcacgat 6808031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 385
Target Start/End: Original strand, 13547409 - 13547555
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| |||||||||||| |||| |||||  | ||| ||||||||| |||||  |||| ||||||| | ||||||| ||| ||||| ||    
T  13547409 acaaaagactctccactcatgtgttttccaaccccatgaattt-tcctcaaaaggcaccgacccttttcacaagagctccctcttttggttatccaagat 13547507  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||| || | ||   |||||| ||||||||||||||| |||||||||||    
T  13547508 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 13547555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 385
Target Start/End: Original strand, 13549320 - 13549466
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| |||||||||||| |||| |||||  | ||| ||||||||| |||||  |||| ||||||| | ||||||| ||| ||||| ||    
T  13549320 acaaaagactctccactcatgtgttttccaaccccatgaattt-tcctcaaaaggcaccgacccttttcacaagagctccctcttttggttatccaagat 13549418  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||| || | ||   |||||| ||||||||||||||| |||||||||||    
T  13549419 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 13549466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 2926597 - 2926523
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccatttt 184  Q
    ||||||||| ||||| ||||| || |||||| ||| ||||||||||||||| ||| || ||||||||||||||||    
T  2926597 caaagagatgcaaaaaggttacaataaattaactttaacaagttcttcaagcacaaacctaatttctaccatttt 2926523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 432
Target Start/End: Original strand, 47255722 - 47255846
Alignment:
Q  307 ccaagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtct 406  Q
    ||||||||||  |||||| ||||||||| ||||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||      
T  47255722 ccaagagccccatcttttggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttc 47255820  T
Q  407 catcctttagtttccatgagattcac 432  Q
    | |||||| |||||||||||||||||    
T  47255821 cctcctttggtttccatgagattcac 47255846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 3156955 - 3156843
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||   ||| |||  | ||||||||| ||||||||||| ||||  | ||||| || |    
T  3156955 acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttctcaatctcaccaatgaacaaga 3156856  T
Q  208 gactcaatgattt 220  Q
     ||||||||||||    
T  3156855 cactcaatgattt 3156843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 4552715 - 4552827
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    |||||| ||||||||  ||||| |||||||||||||||||||| ||   ||||||| || ||||||||| ||||||||||| ||||  | ||||| || |    
T  4552715 acaaagggatacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaacctaatttctacccattttctcaatctcaccaatgaacaaga 4552814  T
Q  208 gactcaatgattt 220  Q
     ||||||||||||    
T  4552815 cactcaatgattt 4552827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 22079406 - 22079318
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttcc 197  Q
    |||||||||||||||| ||||| ||||||||||||| |||||| ||   ||| ||| || ||||||||||||||||  || ||||||||    
T  22079406 acaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaacataatttctaccatttttccaatctcttcc 22079318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 49918440 - 49918328
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||   ||| |||  | ||||||||| ||||||||||| ||||  | ||||| || |    
T  49918440 acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttctcaatctcaccaatgaacaaga 49918341  T
Q  208 gactcaatgattt 220  Q
     ||||||||||||    
T  49918340 cactcaatgattt 49918328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 385
Target Start/End: Original strand, 37879231 - 37879377
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| |||||  | ||||||||||||| | |||  |||| ||||||||| ||||||| ||||||||| ||    
T  37879231 acaaaagactctccactcatgtgtttcccaaccccatgaattt-tccccaaaaggcaccaacctttttcacaagagccccctctttttgttctccaagat 37879329  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||| || | ||   |||||| |||||||||||| || |||| ||||||    
T  37879330 tcacatcttgaagctttgaacctcacccaaagatcctcaacatttagt 37879377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 19752776 - 19752734
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  19752776 acaaagagatacaaatcggttacaagaaattagcttcaacaag 19752734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 19754339 - 19754147
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  |||| ||||||||| |||| || ||| ||||| ||    
T  19754339 acaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcacaagagccccctctcttggttttccaagat 19754241  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| ||   |    |||||| |||||||||||||||  |||||||||| | || |  ||||||||||  | |||||| |||||||||||||||||    
T  19754240 tcaaatcatggtgctttgaacctcacccaaagacccttaacctttagtatcta-gaaccctaaaagttccctcctttggtttccatgagattcac 19754147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 19754585 - 19754543
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  19754585 acaaagagatacaaatcggttacaagaaattagcttcaacaag 19754543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 6068354 - 6068301
Alignment:
Q  351 atttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagt 404  Q
    |||||||||||| |||||||||| |||| |||||  ||||||||||||||||||    
T  6068354 atttgaatctcatccaaagaccctcaacttttagcctttaagttccctaaaagt 6068301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 12318604 - 12318717
Alignment:
Q  112 aagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctct-tccatgaaaaatagac 210  Q
    |||| |||||||| ||||| |||||||||||||||||||| ||| || | ||| || |||||||||||  ||||  | |||||  ||||||| || | ||    
T  12318604 aagacatacaaaatggttacaagaaattagcttcaacaagctctccatgaacaaacctaatttctacccatttccaaatctctacccatgaacaagaaac 12318703  T
Q  211 tcaatgatttcact 224  Q
    ||||||||||||||    
T  12318704 tcaatgatttcact 12318717  T

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Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 28220304 - 28220349
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  28220304 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 28220349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 28223499 - 28223544
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  28223499 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 28223544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 25652176 - 25652064
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttc-catgaaaaata 207  Q
    |||||||||||||| |  |||| |||||||||||||||||||  |||  ||  ||| ||||||||||||||| ||||||| | | ||| |||||| || |    
T  25652176 acaaagagatacaagagagttacaagaaattagcttcaacaaactctcaaataacacacttaatttctaccaatttctcaatattttctcatgaacaaaa 25652077  T
Q  208 gactcaatgattt 220  Q
     ||||||||||||    
T  25652076 tactcaatgattt 25652064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 4535559 - 4535630
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctacca 180  Q
    ||||||||||||||||  |||| ||||||||  |||||| ||| ||| |||| ||| |||||||||||||||    
T  4535559 acaaagagatacaaaaatgttacaagaaattgacttcaataagctctccaagaacaaacttaatttctacca 4535630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 19752526 - 19752388
Alignment:
Q  246 actctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatattt 345  Q
    ||||||||| ||||||||| || || ||||||| || ||||||||||||| | |||  ||   ||||||||  |||||| ||||||||| ||||| |||     
T  19752526 actctccactcatgtgtttcccaactcaatgaatct-tccccaaaaggcaccaaccttttcataagagccccatcttttggttctccaagattcacatta 19752428  T
Q  346 ggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
     |||  || ||| ||||||||||||||  |||||||||||    
T  19752427 tgacgcttagaacctcacccaaagaccttcaacctttagt 19752388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 41135910 - 41135835
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccatttt 184  Q
    ||||| |||||||||| | ||| ||||||||| |||||| |||||||||||| ||| |  ||||||||||| ||||    
T  41135910 acaaatagatacaaaaggtttacaagaaattaacttcaaaaagttcttcaagaacaaatctaatttctaccctttt 41135835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 928054 - 928096
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||    
T  928054 acaaagagatccaaaagggttacaagaaattagcttcaacaag 928096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 274 - 432
Target Start/End: Original strand, 9109756 - 9109914
Alignment:
Q  274 atgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagaccc 373  Q
    ||||| ||||||||||||| |||| |||   | ||| ||| || || |||| ||||||||| ||||| || | ||   |||||| |||||||||| ||||    
T  9109756 atgaatctctccccaaaagacatcaaccctctcccatgagtccccttttttggttctccaagattcacatcttgaagttttgaacctcacccaaataccc 9109855  T
Q  374 ccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
     ||||||||||| ||||  | ||| |||||| ||||| |||  ||||||||| ||||||    
T  9109856 tcaacctttagtatttatataccccaaaagtttcatcatttgatttccatgacattcac 9109914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 28265632 - 28265674
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  28265632 acaaagagatacaaatgggttacaagaaattagcttcaacaag 28265674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 31659328 - 31659286
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  31659328 acaaagagatacaaatgggttacaagaaattagcttcaacaag 31659286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 31925785 - 31925827
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  31925785 acaaagagatacaaatgggttacaagaaattagcttcaacaag 31925827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 47255418 - 47255460
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  47255418 acaaagagatacaaatgggttacaagaaattagcttcaacaag 47255460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 16914253 - 16914342
Alignment:
Q  109 acaaagagatacaaaacggttataagaaa-ttagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttcc 197  Q
    |||||||||||||||| ||||| |||||| |||||||||||| | ||| |||| ||| || |||||| ||||  |||| || ||||||||    
T  16914253 acaaagagatacaaaagggttagaagaaacttagcttcaacaggctctccaagaacaaacataatttttacccatttcccaatctcttcc 16914342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 23555343 - 23555388
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||   ||||||||||||||| ||||||||||||    
T  23555343 acaaagagatacaaatgagttataagaaattagtttcaacaagttc 23555388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 1050522 - 1050638
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttc-catgaaaaata 207  Q
    ||||||||| ||||||  |||| |||||||||||||||| ||| |||  ||| ||| || ||||||  |||  |||| || ||||||| |||||| || |    
T  1050522 acaaagagacacaaaaatgttacaagaaattagcttcaataagctctcgaagaacacacctaattttcacccatttcccaatctcttcacatgaacaaga 1050621  T
Q  208 gactcaatgatttcact 224  Q
    |||||||| ||||||||    
T  1050622 gactcaataatttcact 1050638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 11348786 - 11348746
Alignment:
Q  111 aaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  11348786 aaagagatacaaatgggttacaagaaattagcttcaacaag 11348746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 13316431 - 13316475
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||||| ||||| |||||||||||||  ||||||||    
T  13316431 caaagagatacaaaagggttacaagaaattagctttgacaagttc 13316475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 38747053 - 38747113
Alignment:
Q  256 catgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccc 316  Q
    |||||||||||| |||| ||||||||||| |||||||||| | |||  ||| |||||||||    
T  38747053 catgtgttttccaaccctatgaacctctctccaaaaggcaccaaccctttttcaagagccc 38747113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 240
Target Start/End: Complemental strand, 41361004 - 41360872
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    |||||||||||||||  ||||| |||||||||| ||||||||| ||   ||| ||| || ||||||||| |||||||| || ||||  | ||||| || |    
T  41361004 acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttctacccattttcccaatctcaccaatgaacaaga 41360905  T
Q  208 gactcaatgatttcacttaccaaaaatgtttac 240  Q
     |||||||  ||||||| ||| || ||||||||    
T  41360904 cactcaatattttcactcacccaagatgtttac 41360872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 7176 - 6984
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| |||||||||||| |||| ||||| || ||||||||||||| | |||  |||| ||||||||| ||||||| ||||||||| ||    
T  7176 acaaaagactctccactcatgtgttttccaaccccatgaatct-tccccaaaaggcaccaacccttttcacaagagccccctcttttggttctccaagat 7078  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| |||||||||||||||||    
T  7077 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccatgagattcac 6984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 7417 - 7375
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  7417 acaaagagatacaaatgggttacaagaaattagcttcaacaag 7375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 239 - 432
Target Start/End: Original strand, 34311036 - 34311229
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||||||  ||| |||||||| ||||||||||||| | |||  ||||| |||||||| ||||||| ||||||||| ||    
T  34311036 acaaaagactctccactcatgtgttttccatccccatgaacct-tccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagat 34311134  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||| ||||| ||||||||||| | ||  | ||||||||||  | |||||| |||||||||||||||||    
T  34311135 tcacatcttgaagctttgaacctcacccaaggaccctcaacctttagtatctacataccctaaaagttccttcctttggtttccatgagattcac 34311229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 432
Target Start/End: Original strand, 4512710 - 4512901
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaatt 338  Q
    |||||||||||||||| ||||||||| |  |||| ||||| || ||||||||||||| | |||  || |||||||||| ||||||| |||||| || |||    
T  4512710 acaaatgactctccactcatgtgtttccaaaccccatgaatct-tccccaaaaggcaccaaccctttcccaagagccccctcttttggttctctaagatt 4512808  T
Q  339 catatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    || || | ||   |||||| ||||||||||||||| ||||||||||  | |||   ||||||||||  | |||||| |||||||||||||||||    
T  4512809 cacatcttgaagctttgaacctcacccaaagaccctcaacctttagaatctaa-aaccctaaaagttccctcctttggtttccatgagattcac 4512901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 271 - 432
Target Start/End: Complemental strand, 5116451 - 5116290
Alignment:
Q  271 ccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaaga 370  Q
    |||||||| ||||| |||||||||| |||||   | |||||||||| ||||||| |||||| || ||||| || | ||   ||||||  ||||| |||||    
T  5116451 ccaatgaatctctctccaaaaggcaccgaccctctcccaagagccccctcttttggttctcaaagattcacatcttgaagttttgaacatcacctaaaga 5116352  T
Q  371 cccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| ||||||||||| ||||| | ||||||||||| | |||||| || ||||||||||||||    
T  5116351 ccctcaacctttagtatttaaataccctaaaagtcccctcctttggtatccatgagattcac 5116290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 1360229 - 1360354
Alignment:
Q  109 acaaagagatacaaaac--ggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctc-ttccatgaaaaa 205  Q
    ||||||||||||||||   ||||| |||||||| ||||||||||||||| ||||   | || ||||||||||| ||||| || |||| ||||||||| ||    
T  1360229 acaaagagatacaaaaaagggttacaagaaattcgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaa 1360328  T
Q  206 tagactcaatgatttcacttaccaaa 231  Q
     |||||||||||||||||| ||||||    
T  1360329 gagactcaatgatttcactcaccaaa 1360354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 2390130 - 2389938
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    ||||| |||| ||||| |||||||||||| |||| ||||| || |||||||||| || | |||  |||| ||| ||||| ||||||| ||| ||||| ||    
T  2390130 acaaaagactatccactcatgtgttttccaaccccatgaatct-tccccaaaagccaccaacccttttcgcaatagccccctcttttggttttccaagat 2390032  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   |||||||||| || |||||| |||||||||||||||||    
T  2390031 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaaaa-ccctaaaagtttcctcctttggtttccatgagattcac 2389938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 6431819 - 6431627
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatt-tccaagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||| ||| |||||||||||| |||| ||||| || ||||||||||||| | |||  ||  |||||||||| ||||||| ||||||||| ||    
T  6431819 acaaaagactctacactcatgtgttttccaaccccatgaatct-tccccaaaaggcaccaaccctttccccaagagccccctcttttggttctccaagat 6431721  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| ||||| |||||||||||    
T  6431720 tcacatcttgaagttttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttctatgagattcac 6431627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 239 - 450
Target Start/End: Original strand, 22328718 - 22328931
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||||||||||| || ||||| ||| || |||| ||||| |||||||||||||||| | ||   ||||| |||||||| ||||||| ||||||||| ||    
T  22328718 acaaatgactctctactcatgtttttcccaaccctatgaatctctccccaaaaggcaccaactcttttcctaagagccccctcttttggttctccaagat 22328817  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac-aagc 436  Q
    | | || | ||   ||| || |||  ||||||| || ||||||||||| | ||| | |||||||||| |  |||||| ||||||||||||||||| ||||    
T  22328818 ttacatcttgaagcttttaacctccaccaaagatcctcaacctttagtatctaaataccctaaaagttttctcctttggtttccatgagattcactaagc 22328917  T
Q  437 tctcttaacaaatg 450  Q
    |  |||||||||||    
T  22328918 ttacttaacaaatg 22328931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 117 - 245
Target Start/End: Complemental strand, 26639402 - 26639273
Alignment:
Q  117 atacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctctt-ccatgaaaaatagactcaat 215  Q
    |||||||| ||||| ||||||||| | |||||||  ||| |||| |||||| ||||||||||||||||| || |||||| |||  || || |||||||||    
T  26639402 atacaaaagggttacaagaaattaacatcaacaaactctccaagaacatacctaatttctaccattttcacaatctcttcccaaaaagaagagactcaat 26639303  T
Q  216 gatttcacttaccaaaaatgtttacaaatg 245  Q
    ||||| ||| ||| ||| ||||||||||||    
T  26639302 gattttactcacctaaagtgtttacaaatg 26639273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 432
Target Start/End: Original strand, 32358199 - 32358348
Alignment:
Q  283 tccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctt 381  Q
    ||||||||||||| | |||  |||| ||||||||| ||||||| ||||||||| ||||| || | ||   |||||| ||||||||||||||| |||||||    
T  32358199 tccccaaaaggcaccaacccttttcacaagagccccctcttttggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctt 32358298  T
Q  382 tagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    |||| | |||   ||||||||||  | |||||| |||||||||||||||||    
T  32358299 tagtatctaa-aaccctaaaagttccctcctttggtttccatgagattcac 32358348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 432
Target Start/End: Complemental strand, 29608520 - 29608397
Alignment:
Q  308 caagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctc 407  Q
    ||||||||| ||||||| ||||||||| ||||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  |    
T  29608520 caagagccccctcttttggttctccaagattcacatcttgaagttttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttcc 29608422  T
Q  408 atcctttagtttccatgagattcac 432  Q
     |||||| |||||||||||||||||    
T  29608421 ctcctttggtttccatgagattcac 29608397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 239 - 432
Target Start/End: Original strand, 2361291 - 2361483
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| ||||| |  ||||||||||||| | |||  |||| ||||||||| |||||||  |||| ||| ||    
T  2361291 acaaaagactctccactcatgtgtttcccaaccccatgaatca-tccccaaaaggcaccaacccttttcacaagagccccctcttttgattcttcaagat 2361389  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||    ||||||||||||||||||||| ||| ||||||| | |||  | |||||||||  | |||||| |||||||||||||||||    
T  2361390 tcacatcttgaaggattgaatctcacccaaagaccctcaatctttagtatctaaaat-cctaaaagttccctcctttggtttccatgagattcac 2361483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 432
Target Start/End: Complemental strand, 3258838 - 3258651
Alignment:
Q  245 gactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaattcatat 343  Q
    |||||||||| ||| ||||| ||  ||| ||||| || ||||||||||||| | |||  ||||| ||||||||  |||||| ||||||||| ||||| ||    
T  3258838 gactctccactcatatgtttcccatccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccatctttttgttctccaagattcacat 3258740  T
Q  344 ttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
       ||   |||||| ||||||||||||||| ||||||||||| | ||  | ||||||||||  | |||| | |||||||||||||||||    
T  3258739 catgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagttccctcctctggtttccatgagattcac 3258651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 47674021 - 47674133
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||   ||| |||  | ||||||||| ||||||||||| ||||  | ||||| || |    
T  47674021 acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttctcaatctcaccaatgaacaaga 47674120  T
Q  208 gactcaatgattt 220  Q
     ||||||||||||    
T  47674121 cactcaatgattt 47674133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 245 - 432
Target Start/End: Complemental strand, 22269815 - 22269630
Alignment:
Q  245 gactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatatt 344  Q
    |||||||||| ||||||||| ||  ||| ||||| || ||||||||||||| | ||   || |||||||||| ||||||| ||||||||| ||||| ||     
T  22269815 gactctccactcatgtgtttcccctccccatgaatct-tccccaaaaggcaccaactctttcccaagagccc-ctcttttggttctccaagattcacatc 22269718  T
Q  345 tggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    | |    |||||| ||||||||||||||| ||| ||||||| | ||  | ||||||| ||  | |||||| |||||||||||||||||    
T  22269717 ttgtagctttgaacctcacccaaagaccctcaaactttagtatctacataccctaaatgttccctcctttggtttccatgagattcac 22269630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 22552822 - 22552897
Alignment:
Q  304 tttccaagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacc 379  Q
    ||||||||||||| ||||||| |||||| || ||||| |||| |||  ||| |||||||||||||||||| |||||    
T  22552822 tttccaagagccccctcttttggttctctaagattcacattttgaccctttaaatctcacccaaagaccctcaacc 22552897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 1113747 - 1113705
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  1113747 acaaagagatacaaatgggttataagaaattagcttcaacaag 1113705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 48491668 - 48491534
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaatag 208  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||   ||| |||  | ||||||||| |||||||| || ||||  | ||||| || |     
T  48491668 caaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctcaccaatgaacaagac 48491569  T
Q  209 actcaatga-tttcacttaccaaaaatgtttacaa 242  Q
    ||||||||| ||||||| ||| ||| |||||||||    
T  48491568 actcaatgattttcactcacccaaagtgtttacaa 48491534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 432
Target Start/End: Original strand, 6360301 - 6360424
Alignment:
Q  308 caagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaag-tct 406  Q
    ||||||||| ||||||| ||||||||| ||||| || | || | ||| || ||||||||||||||| ||||||||| | | |||   ||||||||| |||    
T  6360301 caagagccccctcttttggttctccaagattcacatcttgaaacttttaacctcacccaaagaccctcaacctttaatatctaa-aaccctaaaagttct 6360399  T
Q  407 catcctttagtttccatgagattcac 432  Q
    | |||||| |||||||||||||||||    
T  6360400 c-tcctttggtttccatgagattcac 6360424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 27347907 - 27347862
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  27347907 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 27347862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 4509026 - 4509117
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctc 331  Q
    |||||||||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  || |||||||| | ||||||| ||||||    
T  4509026 acaaatgactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaaccctttcccaagagctccctcttttggttctc 4509117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 4510868 - 4510959
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctc 331  Q
    |||||||||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  || |||||||| | ||||||| ||||||    
T  4510868 acaaatgactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaaccctttcccaagagctccctcttttggttctc 4510959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 31733047 - 31733159
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    |||||||||||||||  ||||| ||||||||||||||| |||| ||   ||| |||  | ||||||||| ||||||||||||||||  | ||||| || |    
T  31733047 acaaagagatacaaatgggttacaagaaattagcttcaccaagctcacaaagaacaaccctaatttctacccattttctcagtctcaccaatgaacaaga 31733146  T
Q  208 gactcaatgattt 220  Q
     ||||||||||||    
T  31733147 cactcaatgattt 31733159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 43363556 - 43363628
Alignment:
Q  113 agagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttc 185  Q
    ||||||||||||  |||| || ||||||| ||||||||| ||| |||| ||| || |||||||||||||||||    
T  43363556 agagatacaaaagagttacaataaattagtttcaacaagctctccaagaacaaacctaatttctaccattttc 43363628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 48599757 - 48599836
Alignment:
Q  352 tttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| |||||||||||||||||    
T  48599757 tttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccatgagattcac 48599836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 23555130 - 23555055
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccatttt 184  Q
    |||||||| |||||||  |||| |||||||||||||||||||||||   ||| |||  | ||||||||||||||||    
T  23555130 acaaagaggtacaaaagtgttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctaccatttt 23555055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 48489520 - 48489477
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagtt 153  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||    
T  48489520 caaagagatacaaatgggttacaagaaattagcttcaacaagtt 48489477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 2390372 - 2390330
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  2390372 acaaagagatacaaatgggttacaagaaattagcttcaacaag 2390330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 6360030 - 6360072
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  6360030 acaaagagatacaaatgggttacaagaaattagcttcaacaag 6360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 6432061 - 6432019
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  6432061 acaaagagatacaaatgggttacaagaaattagcttcaacaag 6432019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 22270063 - 22270021
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  22270063 acaaagagatacaaatgggttacaagaaattagcttcaacaag 22270021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 30024810 - 30024852
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  30024810 acaaagagatacaaatgggttacaagaaattagcttcaacaag 30024852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 32358132 - 32358174
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  32358132 acaaagagatacaaatgggttacaagaaattagcttcaacaag 32358174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 3904756 - 3904833
Alignment:
Q  169 taatttctaccattttctcagtctcttcc-atgaaaaatagactcaatgatttcacttaccaaaaatgtttacaaatg 245  Q
    ||||||||||||||||| || |||||||| | ||| || ||||||||||||||||||  || ||  ||||||||||||    
T  3904756 taatttctaccattttcccaatctcttcctaagaacaagagactcaatgatttcactcgcccaaggtgtttacaaatg 3904833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 4509130 - 4509206
Alignment:
Q  352 tttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagatt 429  Q
    |||||| |||||||||| |||| ||||||||||| | |||   ||||||||||  |||||||| ||||||||||||||    
T  4509130 tttgaacctcacccaaaaaccctcaacctttagtatctaaaa-ccctaaaagttccatcctttggtttccatgagatt 4509206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 4510972 - 4511048
Alignment:
Q  352 tttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagatt 429  Q
    |||||| |||||||||| |||| ||||||||||| | |||   ||||||||||  |||||||| ||||||||||||||    
T  4510972 tttgaacctcacccaaaaaccctcaacctttagtatctaaaa-ccctaaaagttccatcctttggtttccatgagatt 4511048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 18126734 - 18126689
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| ||||||||||||| |||||||||    
T  18126734 acaaagagatacaaatgggttacaagaaattagcttgaacaagttc 18126689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 22328470 - 22328511
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  |||| ||||||||||||||||||||    
T  22328470 caaagagatacaaaagagttacaagaaattagcttcaacaag 22328511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 35854004 - 35853959
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||    
T  35854004 acaaagagatacaaaagggttacaagaaattagctttgacaagttc 35853959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 36574594 - 36574635
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaa 150  Q
    ||||||||||| |||| ||||| |||||||||||||||||||    
T  36574594 acaaagagatataaaagggttacaagaaattagcttcaacaa 36574635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 43864334 - 43864289
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| | |||||||||||||||||||||    
T  43864334 acaaagagatacaaatgggttacaggaaattagcttcaacaagttc 43864289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 47676214 - 47676255
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaa 150  Q
    |||||||||||||||  ||||| |||||||||||||||||||    
T  47676214 acaaagagatacaaatgggttacaagaaattagcttcaacaa 47676255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 30814500 - 30814421
Alignment:
Q  352 tttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    |||||| ||||||||||||||| ||||||| ||| | |||   ||||||||||  | |||||| |||||||||||||||||    
T  30814500 tttgaacctcacccaaagaccctcaaccttaagtatctaaaa-ccctaaaagttccctcctttggtttccatgagattcac 30814421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 5e-24; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 241 - 430
Target Start/End: Complemental strand, 1683334 - 1683146
Alignment:
Q  241 aaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattca 340  Q
    |||||| | ||||| |||||||||||| |||| ||||| |||| ||||||| ||| | |||  || | || | || |||||||| ||||||||| |||||    
T  1683334 aaatgattatccactcatgtgttttccaaccccatgaatctcttcccaaaatgcaccaaccctttccgaaaaaccttctcttttggttctccaagattca 1683235  T
Q  341 tatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattc 430  Q
     ||||| |  ||||||||||||||||||||||| ||||||||||||| |||||||| ||||  |||| || |||  ||||||||||||||    
T  1683234 catttgaaacatttgaatctcacccaaagaccctcaacctttagtttctaagttccataaatttctc-tcatttgatttccatgagattc 1683146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 240 - 432
Target Start/End: Original strand, 43404054 - 43404245
Alignment:
Q  240 caaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaatt 338  Q
    ||||||||||||||| |||||||||||| |||| ||||| || ||||||||||||| | |||  ||||| |||||||| ||||||| ||||||||| |||    
T  43404054 caaatgactctccactcatgtgttttccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagatt 43404152  T
Q  339 catatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    || || | || | |||||| ||||||||||||||| |||| |||||| | |||   ||||||||||  | || ||| |||||||||||||||||    
T  43404153 cacatcttgaaactttgaacctcacccaaagaccctcaacttttagtatctaa-aaccctaaaagttccctcatttggtttccatgagattcac 43404245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 245 - 432
Target Start/End: Complemental strand, 28074458 - 28074273
Alignment:
Q  245 gactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaagagccctctcttttagttctccaaaattcatatt 344  Q
    |||||||||| ||||||||| ||  ||| ||||| || ||||||||| ||| | || | || |||||||||| ||||||| ||||||||| ||||| ||     
T  28074458 gactctccactcatgtgtttcccatccccatgaatct-tccccaaaacgcaccaactatttcccaagagccccctcttttggttctccaagattcacatc 28074360  T
Q  345 tggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    | || | |||||| ||||||||||||||| ||||||||||| | |||   |||||||||| || |||||| |||||||||||||||||    
T  28074359 ttgaaactttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagtttcctcctttggtttccatgagattcac 28074273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 40913187 - 40912994
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| ||||||||| || |||| ||||| ||   || |||||||| | |||  ||||| |||||||| ||||||| ||||||||| ||    
T  40913187 acaaatgactctccactcatgtgtttcccaaccccatgaatcttctccaaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagat 40913088  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| |||| ||   |||||| |||||||||||||||  |||||||||| | |||   ||||||||||| | |||||| |||||||||||||||||    
T  40913087 tcacattttgaagctttgaacctcacccaaagaccctaaacctttagtatctaa-aaccctaaaagtcccctcctttggtttccatgagattcac 40912994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 234 - 432
Target Start/End: Original strand, 43402105 - 43402302
Alignment:
Q  234 tgtttacaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctcc 332  Q
    |||| |||||||| ||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  |||| ||||||||| ||||||| |||||||    
T  43402105 tgttcacaaatgattctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttctcaagagccccctcttttggttctcc 43402203  T
Q  333 aaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    || ||||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| |||||||| ||||||||    
T  43402204 aagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccataagattcac 43402302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 450
Target Start/End: Complemental strand, 46860319 - 46860108
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaattt-ccaagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| ||||||||| ||  ||| ||||| || ||||||||||||| | |||  ||| |||||||||| ||||||| ||||||||| ||    
T  46860319 acaaatgactctccactcatgtgtttcccatccctatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagat 46860221  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaag-tctcatcctttagtttccatgagattca-caag 435  Q
    ||| ||   ||   |||||| ||||||||||||||| ||||||||||| | ||  | ||||||||| |||| || ||| |||||||||||||||| ||||    
T  46860220 tcacatcatgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagttctc-tcatttggtttccatgagattcaccaag 46860122  T
Q  436 ctctcttaacaaatg 450  Q
    |||| ||||||||||    
T  46860121 ctct-ttaacaaatg 46860108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 432
Target Start/End: Original strand, 49199791 - 49199983
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||| ||||| || |||| ||||| || ||||||||||||| | |||  |||| ||| ||||| ||||||| ||||||||| ||    
T  49199791 acaaaagactctccactcatatgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcacaatagccccctcttttggttctccaagat 49199889  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | || | |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| |||||||||||||||||    
T  49199890 tcacatcttgaaactttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccatgagattcac 49199983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 54593553 - 54593360
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||||||  ||| ||||| || ||||||||||| | | |||  ||||| |||||||| ||||||| ||||||||| ||    
T  54593553 acaaaagactctccactcatgtgttttccatccccatgaatct-tccccaaaaggtaccaacccttttcccaagagccccctcttttggttctccaagat 54593455  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||| ||||| ||||||||||| | ||  | ||||||||||  | |||||| |||||||||||||||||    
T  54593454 tcacatcttgaagctttgaacctcacccaaggaccctcaacctttagtatctacataccctaaaagttccctcctttggtttccatgagattcac 54593360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 239 - 385
Target Start/End: Original strand, 6095919 - 6096065
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttccaa-gagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  |||| || |||||| ||||||| ||||||||| ||    
T  6095919 acaaatgactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcaaaagagccccctcttttggttctccaagat 6096017  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||| || | ||   |||||| ||||||||||||||| |||||||||||    
T  6096018 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 6096065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 239 - 385
Target Start/End: Complemental strand, 30235973 - 30235827
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| | |||||||||| |||| |||||  | ||||||||||||| | |||  |||| ||||||||| ||||||| ||||||||| ||    
T  30235973 acaaatgactctccactcttgtgttttccaaccccatgaatat-tccccaaaaggcaccaacccttttcacaagagccccctcttttggttctccaagat 30235875  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||| || | ||   |||||| ||||||||||||||| |||||||||||    
T  30235874 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 30235827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 34491061 - 34490869
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    |||||||||||||||| |||||||||| | || | ||||| || || |||||||||| | |||  |||| ||||||||| ||||||| ||||||||| ||    
T  34491061 acaaatgactctccactcatgtgtttttcaactccatgaatct-tctccaaaaggcaccaacccttttcacaagagccccctcttttggttctccaagat 34490963  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaag-tctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||| |||| |||||| |||||||||||||||||    
T  34490962 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttctc-tcctttggtttccatgagattcac 34490869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 502
Target Start/End: Complemental strand, 4569799 - 4569538
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| ||||| || ||||||| |||||    ||  ||||| |||||||| |||||||  |||||||| ||    
T  4569799 acaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaataggcacacccccttttcccaagagccccctcttttgattctccaagat 4569701  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattca-caagc 436  Q
    | | || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| |||||||||||||||| |||||    
T  4569700 ttacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccatgagattcaccaagc 4569602  T
Q  437 tctcttaacaaatgtgtcagatgatgcttatatatagtgttcaaattcaagcaaaatcgtgtcacg 502  Q
    |  || |||||||| |||| |  |||||||||| |  ||||||||| | |||||||||||||||||    
T  4569601 ttactcaacaaatgggtcaaagaatgcttatattt--tgttcaaatccgagcaaaatcgtgtcacg 4569538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 239 - 385
Target Start/End: Original strand, 41819842 - 41819987
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    |||||||| ||||||| ||||||||| || |||| |||||  ||| ||||||||||| | |||  ||||| |||||||| ||||||| |||||| || ||    
T  41819842 acaaatgagtctccactcatgtgtttcccaaccccatgaa--tcttcccaaaaggcaccaacccttttcccaagagccccctcttttggttctctaagat 41819939  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||| || | ||   |||||| ||||||||||||||| |||||||||||    
T  41819940 tcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 41819987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 2020229 - 2020187
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  2020229 acaaagaaatacaaaacggttataagaaattagcttcaacaag 2020187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 8166535 - 8166628
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttccatgaa 202  Q
    |||||||||||||||| |||||||||| |||| |||||||||  ||| |||| ||| || ||||||||||   ||| ||| |||||||||||||    
T  8166535 acaaagagatacaaaaaggttataagatattaacttcaacaaactctccaagaacaaacctaatttctactcatttatcaatctcttccatgaa 8166628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 47304093 - 47303954
Alignment:
Q  246 actctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaattcatatt 344  Q
    ||||||||| ||||||||| || |||| ||||| || ||||||||||||| | |||  ||||| |||||||| ||||||| ||||||||| ||||| ||     
T  47304093 actctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacatc 47303995  T
Q  345 tggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    | ||   |||||| ||||||||||||||  |||| ||||||    
T  47303994 ttgaagctttgaacctcacccaaagaccttcaacatttagt 47303954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 45095253 - 45095142
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttccatgaaaaatag 208  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||   ||| |||  | ||||||||||||||||| || ||||  | ||||| || |     
T  45095253 acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttcccaatctcaccaatgaacaagac 45095154  T
Q  209 actcaatgattt 220  Q
    ||||||||||||    
T  45095153 actcaatgattt 45095142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 450
Target Start/End: Complemental strand, 36796142 - 36796044
Alignment:
Q  352 tttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcacaagctctcttaacaaatg 450  Q
    |||||| |||| | |||||||  ||||||||||||| ||||||||||||||||    ||||||  |||||||||||||| |||| ||| | ||||||||    
T  36796142 tttgaacctcatctaaagaccttcaacctttagtttctaagttccctaaaagttatctcctttgatttccatgagattctcaagttctttcaacaaatg 36796044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 245
Target Start/End: Original strand, 1313884 - 1314021
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggac-atacttaatttctaccattttctcagtctcttc-catgaaaaata 207  Q
    |||||| |||||||| | ||  ||||||||||||| |||||| ||| |||| || | || |||||| |||| |||||||| ||||||| || ||| || |    
T  1313884 caaagatatacaaaaggcttgcaagaaattagctttaacaagctctccaagaacaaaacataatttttacccttttctcaatctcttctcaagaataaga 1313983  T
Q  208 gactcaatgatttcacttaccaaaaatgtttacaaatg 245  Q
    |||||||| |||||||| ||| ||  ||||||||||||    
T  1313984 gactcaataatttcactcacccaaggtgtttacaaatg 1314021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 5236534 - 5236579
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  5236534 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 5236579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 7762355 - 7762310
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||    
T  7762355 acaaagagatacaaaagagttacaagaaattagcttcaacaagttc 7762310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 20937745 - 20937676
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctacc 179  Q
    ||||||||||||||| ||||| ||||||||| |||||||||| ||| |||  ||| || |||||||||||    
T  20937745 caaagagatacaaaagggttacaagaaattaacttcaacaagctctccaaaaacaaacataatttctacc 20937676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 26323155 - 26323236
Alignment:
Q  112 aagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctc 193  Q
    |||| |||||||| ||||| |||||||||||||||||||  |||||||  ||| || |||||| |||| |||||||| ||||    
T  26323155 aagatatacaaaaaggttacaagaaattagcttcaacaaactcttcaaaaacaaacctaatttttacccttttctcaatctc 26323236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 29810958 - 29810913
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  29810958 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 29810913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 46860564 - 46860479
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctc 193  Q
    |||||||||||||||  ||||| |||||||||||||||||||| ||   ||| ||| || ||||||||| ||||||||||| ||||    
T  46860564 acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccattttctcaatctc 46860479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 3148077 - 3148157
Alignment:
Q  117 atacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttcc 197  Q
    |||||| | ||||| |||||||||||||||||||| |||||||| | | || ||||||||| |  ||||||| ||||||||    
T  3148077 atacaataaggttacaagaaattagcttcaacaagctcttcaagaagaaacctaatttctatccatttctcaatctcttcc 3148157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 24635345 - 24635277
Alignment:
Q  111 aaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctacc 179  Q
    ||||||||||||||  |||| || ||||||||||||||||  ||| |||| ||| ||||||||||||||    
T  24635345 aaagagatacaaaatagttacaaaaaattagcttcaacaaactctccaagaacaaacttaatttctacc 24635277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 35138784 - 35138896
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctc-ttccatgaaaaata 207  Q
    ||||||||||||||||  |||  ||||||||| |||||||||  ||  |||| ||| || |||||||||||  ||||||| |||| ||||||||| || |    
T  35138784 acaaagagatacaaaagagttgcaagaaattaacttcaacaaactcaccaagaacaaacataatttctacccatttctcaatctctttccatgaacaaga 35138883  T
Q  208 gactcaatgattt 220  Q
     ||||||||||||    
T  35138884 cactcaatgattt 35138896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 455
Target Start/End: Original strand, 25491229 - 25491295
Alignment:
Q  389 taagttccctaaaagtctcatcctttagtttccatgagattc-acaagctctcttaacaaatgtgtca 455  Q
    ||||||||||||||||| |||| |||||||| ||||||||||  |||||||||| |||||||| ||||    
T  25491229 taagttccctaaaagtcccatcttttagttt-catgagattcgccaagctctctcaacaaatgggtca 25491295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 504
Target Start/End: Original strand, 5434355 - 5434462
Alignment:
Q  396 cctaaaagtctcatcctttagtttccatgagattca-caagctctcttaacaaatgtgtcagatgatgcttatatatagtgttcaaattcaagcaaaatc 494  Q
    |||||||||  | ||||||  ||||||||||||||| ||||||  || |||||||| | || ||||||||  ||| ||||||||| ||| |||||||||     
T  5434355 cctaaaagttccctcctttgatttccatgagattcaccaagcttactcaacaaatgagccaaatgatgct--tatgtagtgttcatattaaagcaaaatt 5434452  T
Q  495 gtgtcacgat 504  Q
    ||||||||||    
T  5434453 gtgtcacgat 5434462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 30236215 - 30236173
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  30236215 acaaagagatacaaataggttacaagaaattagcttcaacaag 30236173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 46173447 - 46173405
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  46173447 acaaagagatacaaatgggttacaagaaattagcttcaacaag 46173405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 1683543 - 1683450
Alignment:
Q  132 aagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtct-cttccatgaaaaatagactcaatgatttcact 224  Q
    ||||||||||| |||| ||| |||  ||| ||  ||||||||||||||||||||||| |||  ||||||||| || |||||| |||| ||||||    
T  1683543 aagaaattagcatcaataagctctcgaagaacgaacttaatttctaccattttctcaatctatttccatgaacaagagactcgatgacttcact 1683450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 7764554 - 7764509
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||||||  |||| ||||||||||||| |||||||||    
T  7764554 acaaagagatacaaaagagttacaagaaattagctttaacaagttc 7764509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 19683967 - 19684012
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||    
T  19683967 acaaagagatacaaaagggttacaagaaattagctttgacaagttc 19684012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 29813153 - 29813108
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||| ||||  ||||| |||||||||||||||||||||||    
T  29813153 acaaagagatgcaaatgggttacaagaaattagcttcaacaagttc 29813108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 504
Target Start/End: Complemental strand, 34795491 - 34795454
Alignment:
Q  467 tatatagtgttcaaattcaagcaaaatcgtgtcacgat 504  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  34795491 tatatactgttcaaattcaggcaaaatcgtgtcacgat 34795454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 37408548 - 37408503
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||    
T  37408548 acaaagagatacaaaagggttacaagaaattagctttgacaagttc 37408503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 44700556 - 44700597
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaa 150  Q
    |||||||||||||||  ||||| |||||||||||||||||||    
T  44700556 acaaagagatacaaataggttacaagaaattagcttcaacaa 44700597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 51398904 - 51398859
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||   |||| |||||||||||||||||||||||    
T  51398904 acaaagagatacaaatgagttacaagaaattagcttcaacaagttc 51398859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 5258223 - 5258267
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||||| ||||| |||||||||||||  ||||||||    
T  5258223 caaagagatacaaaagggttacaagaaattagctttgacaagttc 5258267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 5260402 - 5260446
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||||| ||||| |||||||||||||  ||||||||    
T  5260402 caaagagatacaaaagggttacaagaaattagctttgacaagttc 5260446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 25491046 - 25491114
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta 177  Q
    |||||||||||||||| |  |||||||||| |||||||||||| |||  ||| ||| || |||||||||    
T  25491046 acaaagagatacaaaaggagtataagaaatcagcttcaacaagctctcaaagaacaaacctaatttcta 25491114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 360 - 432
Target Start/End: Original strand, 26323953 - 26324025
Alignment:
Q  360 tcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    |||||||| ||||| ||||||||||| | ||| |  | ||||||| || |||||| |||||||||||||||||    
T  26323953 tcacccaatgaccctcaacctttagtatctaaatatcttaaaagtttcctcctttggtttccatgagattcac 26324025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 40735473 - 40735361
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    |||||||||||||||  ||||| || ||||||||||||||||| ||   ||| |||  | ||||||||| ||||||||||| ||||  | ||||| || |    
T  40735473 acaaagagatacaaactggttacaataaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttctcaatctcaccaatgaacaaga 40735374  T
Q  208 gactcaatgattt 220  Q
     ||||||||||||    
T  40735373 cactcaatgattt 40735361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 234 - 455
Target Start/End: Original strand, 2973254 - 2973476
Alignment:
Q  234 tgtttacaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctcc 332  Q
    |||| |||||||||||| ||  ||||||||| || |||| ||||| || |||| |||| ||| | |||  |||| ||||||||| ||||||| |||||||    
T  2973254 tgttcacaaatgactctgcattcatgtgtttcccaaccccatgaatct-tcccaaaaaagcaccaacccttttcacaagagccccctcttttggttctcc 2973352  T
Q  333 aaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattca- 431  Q
    || ||||| || | ||   |||||| ||||||||||||||  ||||||||||| | ||    ||||||||||  | |||||| ||||||||||||||||     
T  2973353 aagattcacatcttgaagctttgaacctcacccaaagaccttcaacctttagtatctacaaaccctaaaagttccctcctttggtttccatgagattcac 2973452  T
Q  432 caagctctcttaacaaatgtgtca 455  Q
    |||| |||||||||||||| ||||    
T  2973453 caaggtctcttaacaaatgggtca 2973476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 239 - 468
Target Start/End: Original strand, 3809028 - 3809258
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctc-tcttttagttctccaaaa 336  Q
    |||||||||||||||| ||||||||| || |||| ||||| || || |||||||| | | |||  |||| ||||||||| | |||||| ||||||||| |    
T  3809028 acaaatgactctccactcatgtgtttcccaaccccatgaatct-tctccaaaaggaaccaacccttttcacaagagcccccctcttttggttctccaaga 3809126  T
Q  337 ttcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattca-caag 435  Q
    |||| || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| |||||||||||||||| ||||    
T  3809127 ttcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccatgagattcaccaag 3809225  T
Q  436 ctctcttaacaaatgtgtcagatgatgcttata 468  Q
    ||  || |||||||| |||| |  |||||||||    
T  3809226 cttgctcaacaaatgggtcaaagaatgcttata 3809258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 432
Target Start/End: Complemental strand, 5043475 - 5043284
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||||| ||||||||| || |||| |||||  ||| ||||||||||| | |||  ||||| |||||||||||||||| ||||||||| ||    
T  5043475 acaaaagactctccactcatgtgtttcccaaccccatgaa--tcttcccaaaaggcaccaacccttttcccaagagccctctcttttggttctccaagat 5043378  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||  || | ||   |||||| ||||||||||||||| ||| ||||||| | |||   ||||||||||  | ||||||  ||||||||||||||||    
T  5043377 tctcatcttgaagctttgaacctcacccaaagaccctcaatctttagtatctaa-aaccctaaaagttccctcctttgatttccatgagattcac 5043284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 241 - 432
Target Start/End: Complemental strand, 21593512 - 21593322
Alignment:
Q  241 aaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatt-tccaagagccctctcttttagttctccaaaattc 339  Q
    |||||||||||||| |||||||||||| |||| ||||| || || |||||||||| | |||  ||  |||||||||| ||||||| ||||||||| ||||    
T  21593512 aaatgactctccactcatgtgttttccaaccccatgaatct-tctccaaaaggcaccaaccctttccccaagagccccctcttttggttctccaagattc 21593414  T
Q  340 atatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    | || |  |   |||||| ||||||||||||||| |||| |||||| | |||   ||||||||||   | ||||| |||||||||||||||||    
T  21593413 acatcttaaatctttgaacctcacccaaagaccctcaacatttagtatctaa-aaccctaaaagttctaacctttggtttccatgagattcac 21593322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 504
Target Start/End: Complemental strand, 25072921 - 25072770
Alignment:
Q  352 tttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctca-tcctttagtttccatgagattca-caagctctcttaacaaat 449  Q
    |||||| ||||||||||||||| ||||||||||| | ||| | |||||||||| ||| | ||||  ||||||||||||||| ||||||  || |||||||    
T  25072921 tttgaacctcacccaaagaccctcaacctttagtatctaaataccctaaaagt-tcacttctttgatttccatgagattcatcaagcttactcaacaaat 25072823  T
Q  450 gtgtcagatgatgcttatatatagtgttcaaattcaagcaaaatcgtgtcacgat 504  Q
    | |||| | ||||||  |||| ||||||||||| || |||| ||| |||||||||    
T  25072822 gagtcaaaggatgct--tatacagtgttcaaatccaggcaatatcatgtcacgat 25072770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 5406278 - 5406389
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttccatgaaaaatag 208  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||   ||| |||  | ||||||||||||||||| || ||||  | ||||| || |     
T  5406278 acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttcccaatctcaccaatgaacaagac 5406377  T
Q  209 actcaatgattt 220  Q
    ||||||||||||    
T  5406378 actcaatgattt 5406389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 5410603 - 5410714
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttccatgaaaaatag 208  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||   ||| |||  | ||||||||||||||||| || ||||  | ||||| || |     
T  5410603 acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttcccaatctcaccaatgaacaagac 5410702  T
Q  209 actcaatgattt 220  Q
    ||||||||||||    
T  5410703 actcaatgattt 5410714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 4045513 - 4045401
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacata-cttaatttctaccattttctcagtctcttccatgaaaaata 207  Q
    ||||||||||| |||| | ||| |||||||||||||||||||| || | ||| ||| | | ||||||||||||||||| || ||||| | || || || |    
T  4045513 acaaagagatataaaatgattacaagaaattagcttcaacaagctcataaagaacaaaccctaatttctaccattttcccaatctctccaataaacaaga 4045414  T
Q  208 gactcaatgattt 220  Q
     ||||||||||||    
T  4045413 cactcaatgattt 4045401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 9183109 - 9183221
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcagtctcttccatgaaaaata 207  Q
    |||||||||||||||  ||||| ||||||||||||||||||| |||   ||| |||  | ||||||||| ||||||||||| ||||  | ||||| || |    
T  9183109 acaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaaccctaatttctacccattttctcaatctcaccaatgaacaaga 9183208  T
Q  208 gactcaatgattt 220  Q
     ||||||||||||    
T  9183209 cactcaatgattt 9183221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 31404753 - 31404829
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttc 185  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||   ||| |||  | |||||||||||||||||    
T  31404753 acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttc 31404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 5413472 - 5413583
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtctcttccatgaaaaatag 208  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||   ||| |||  | ||||||||||| ||||| || ||||  | ||||| || |     
T  5413472 acaaagagatacaaaagggttacaagaaattagctttgacaagttcgcaaagaacaaccctaatttctacctttttcccaatctcaccaatgaacaagac 5413571  T
Q  209 actcaatgattt 220  Q
    ||||||||||||    
T  5413572 actcaatgattt 5413583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 603166 - 603208
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  603166 acaaagagatacaaatgggttacaagaaattagcttcaacaag 603208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 2973017 - 2973087
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctacc 179  Q
    |||||||||||||||  ||||| |||||||||||||||||||| ||   ||| ||| || |||||||||||    
T  2973017 acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacc 2973087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 17758113 - 17758071
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  17758113 acaaagagatacaaatgggttacaagaaattagcttcaacaag 17758071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 21589021 - 21588979
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  21589021 acaaagagatacaaatgggttacaagaaattagcttcaacaag 21588979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 21593754 - 21593712
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaag 151  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  21593754 acaaagagatacaaatgggttacaagaaattagcttcaacaag 21593712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 5043717 - 5043632
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctac-cattttctcagtctc 193  Q
    |||||||||||||||   |||| |||||||||||||||||||| ||   ||| ||| || |||||||||| |||||||||| ||||    
T  5043717 acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctactcattttctcaatctc 5043632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 30834615 - 30834659
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||||| ||||| |||||||||||||  ||||||||    
T  30834615 caaagagatacaaaagggttacaagaaattagctttgacaagttc 30834659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 490399 - 490518
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcagtct----cttccatgaaaa 204  Q
    ||||||| ||||||||  |||| |||||||||||||||||||| ||| |||| ||| ||||||||||||| ||||||||| |||    ||| |||||| |    
T  490399 acaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacttaatttctacgattttctcaatctcctcctttcatgaaca 490498  T
Q  205 atagactcaatgatttcact 224  Q
    | ||||||||||| ||||||    
T  490499 agagactcaatgagttcact 490518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 501
Target Start/End: Original strand, 490834 - 491025
Alignment:
Q  309 aagagccctctcttttagttctccaaaattcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctca 408  Q
    |||||||| || |||| ||||||||| ||||| || | ||   |||||| ||||||||||||||| ||||||||||| | ||  | |||||||||   |     
T  490834 aagagcccccttttttggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagctccc 490933  T
Q  409 tcctttagtttccatgagattcac-aagctctcttaacaaatgtgtcagatgatgcttatatatagtgttcaaattcaagcaaaatcgtgtcac 501  Q
    |||||| |||  |||||||||||| |||||  || |||||||| |||| | ||||||||||  ||||||||| || ||||||||||||||||||    
T  490934 tcctttggttctcatgagattcaccaagcttgctcaacaaatgggtcaaaggatgcttata--tagtgttcagatccaagcaaaatcgtgtcac 491025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 434623 - 434578
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||    
T  434623 acaaagagatacaaaagggttacaagaaattagctttgacaagttc 434578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 27521 - 27659
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggac-atacttaatttctaccattttctcagtctcttccat-gaaaaat 206  Q
    |||||||||||||||   |||| |||||||||||||||||||| |||||||| || |||| ||||||||||  ||||| || |||||||| | ||| ||     
T  27521 acaaagagatacaaatgagttacaagaaattagcttcaacaagctcttcaagaacaatacataatttctactcttttcacaatctcttccctagaacaag 27620  T
Q  207 agactcaatgatttcacttaccaaaaatgtttacaaatg 245  Q
    |||||||| ||||||||| | | ||  ||||||||||||    
T  27621 agactcaaagatttcactcatccaaggtgtttacaaatg 27659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 432
Target Start/End: Original strand, 80603 - 80795
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaat 337  Q
    ||||| |||||||| | ||||||||| || |||| ||||| || ||||||||||||| | |||  ||||  |||||||| ||||||| ||||||||| ||    
T  80603 acaaaagactctccgctcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcataagagccccctcttttggttctccaagat 80701  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagattcac 432  Q
    ||| || | ||   |||||| ||||||||||||||| |||||| |||| | |||   ||||||||||  | |||||| |||||||||||||||||    
T  80702 tcaaatcttgaagctttgaacctcacccaaagaccctcaacctctagtatctaa-aaccctaaaagttccctcctttggtttccatgagattcac 80795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 429
Target Start/End: Complemental strand, 11404 - 11217
Alignment:
Q  241 aaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatt-tccaagagccctctcttttagttctccaaaattc 339  Q
    |||||||||||||| ||||||||| || |||| ||||| || || |||||||||| | |||  ||  ||||||||||  |||||| ||||||||| ||||    
T  11404 aaatgactctccactcatgtgtttcccaaccccatgaatct-tctccaaaaggcaccaaccctttccccaagagccccatcttttggttctccaagattc 11306  T
Q  340 atatttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaagtctcatcctttagtttccatgagatt 429  Q
    | || | ||   |||||| ||||||||||||||| ||||||||||| | |||   ||||||||||  | |||||| ||||||||||||||    
T  11305 acatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctaa-aaccctaaaagttccctcctttggtttccatgagatt 11217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 385
Target Start/End: Original strand, 18321 - 18467
Alignment:
Q  239 acaaatgactctccacccatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttc-caagagccctctcttttagttctccaaaat 337  Q
    |||||| ||||||||| |||||||||||  |||  ||||| ||  |||||||||||| | |||  |||| ||||||||| ||||||| ||||||||| ||    
T  18321 acaaataactctccactcatgtgttttca-acctcatgaatcttcccccaaaaggcaccaacccttttcacaagagccccctctttttgttctccaagat 18419  T
Q  338 tcatatttggacaatttgaatctcacccaaagacccccaacctttagt 385  Q
    ||| || | ||   |||||| ||||||||||||||| |||||||||||    
T  18420 tcacatcttgaagctttgaacctcacccaaagacccgcaacctttagt 18467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 20493 - 20538
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||    
T  20493 acaaagagatacaaatgggttacaagaaattagcttcaacaagttc 20538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 25143 - 25102
Alignment:
Q  109 acaaagagatacaaaacggttataagaaattagcttcaacaa 150  Q
    |||||||||||||||| ||||| ||||||||| |||||||||    
T  25143 acaaagagatacaaaaaggttacaagaaattaccttcaacaa 25102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 1005 - 961
Alignment:
Q  110 caaagagatacaaaacggttataagaaattagcttcaacaagttc 154  Q
    ||||||||||||||| ||||| |||||||||||||  ||||||||    
T  1005 caaagagatacaaaagggttacaagaaattagctttgacaagttc 961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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