View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19025_low_9 (Length: 460)
Name: NF19025_low_9
Description: NF19025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19025_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 415; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 15 - 441
Target Start/End: Original strand, 45461119 - 45461545
Alignment:
| Q |
15 |
cacagacatagtagcaggaatcccagctttcttttcacattttattactaatcttcctgcatttcatcaagtgttgatcatggtgtcattcaagtcaatg |
114 |
Q |
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| T |
45461119 |
cacagacatagtagcaggaatcccagctttcttttcacattttatcactaatcttcctgcatttcatcaagtgttgatcatggtgtcattcaagtcaatg |
45461218 |
T |
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| Q |
115 |
ccagtgcctcatgttcccgaaagtgaaaggtatctcataggaaggattgggccaaaatattataaaatatatcgttgcattgtgagatatggatattgtg |
214 |
Q |
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| T |
45461219 |
ccggtgcctcatgttcccgaaagtgaaaggtatctcataggaaggattgggccaaaatattataaaatatatcgttgcattgtgagatatggatattgtg |
45461318 |
T |
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| Q |
215 |
ataataatataagggacacgagtgattttgaggagaaaatcattggtgctataggagaattcatttccattgaacagatgagtgacattgaatcaatggt |
314 |
Q |
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| T |
45461319 |
ataataatataagggacacgagtgattttgaggagaaaatcatcggtgctataggagaattcatttccattgaacagatgagtgacattgaatcaatggt |
45461418 |
T |
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| Q |
315 |
ttcggcagaagaaaaaatgatgatagtgggaaattcatcagatggaaatgcattagtccctttgatgaatgatgaaacatgcaatgaagttagcattact |
414 |
Q |
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| T |
45461419 |
ttcggcagaagaaaaaatgatgatagtgggaaattcatcagatggaaatgcattagtccctttgatgaatgatgaaacatgcaatgaagttagcattact |
45461518 |
T |
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| Q |
415 |
aatgaagctcagattagcccagcagta |
441 |
Q |
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| T |
45461519 |
aatgaagctcagattagcccagcagta |
45461545 |
T |
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