View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19026_low_34 (Length: 202)
Name: NF19026_low_34
Description: NF19026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19026_low_34 |
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Alignment Details
Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 5951764 - 5951939
Alignment:
| Q |
17 |
aatatggcaaatgaatgttctgcatttcagtactttctttttgtatcttgtcattctttcttttctacctataa----agtttacacgaattggatctcg |
112 |
Q |
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| T |
5951764 |
aatatagcaaatgaatgttctgcatttcagtactttctttttgtatcttgtcattctttcttttctacctataaataaagtttacacgaattggatctcg |
5951863 |
T |
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| Q |
113 |
aaaactcagaattcaagaaaagtctaaggattcaaaacatgcttacatacataatatattttctaccatcaaaatt |
188 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
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| T |
5951864 |
aaaactcagaattcaagaaaagtctaaggattcaaaacatgcttacatatataacatattttctaccatcaaaatt |
5951939 |
T |
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