View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19029_low_13 (Length: 278)
Name: NF19029_low_13
Description: NF19029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19029_low_13 |
 | |
|
| [»] chr7 (16 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 4712111 - 4711834
Alignment:
| Q |
1 |
tgtaaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagt |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||||||| || || |||| |
|
|
| T |
4712111 |
tgtaaccttaccatataagtaaaactagaatcaactttgaaattccaagttacattataatcctctgtcacatccattccataacttcttgcagtaaagt |
4712012 |
T |
|
| Q |
101 |
atacagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctc |
200 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
4712011 |
atacagcttctggtgcagtgtaattgggaatggtattgtttaaatagtttggatgatcacttccataaacagttgatacactttgtggatattctttttc |
4711912 |
T |
|
| Q |
201 |
caagtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatcttggttggctggaacttgattttgaccaac |
278 |
Q |
| |
|
|| ||||||||||||||| |||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
4711911 |
caggtaaagaggaaaatcactgtcccaattacgaaacatacctgtatcttggtttggtggaacttgattttgaccaac |
4711834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 4846051 - 4845804
Alignment:
| Q |
1 |
tgtaaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagt |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| || ||||||||||||||||| |||||||||||| ||| | ||||||||||||| || || |||| |
|
|
| T |
4846051 |
tgtaaccttaccatataagtaaaactagaatcaacttcgaaattccaagttacattataatcctctgtcacatactttccataacttcttgcagttaagt |
4845952 |
T |
|
| Q |
101 |
atacagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctc |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
4845951 |
atacagcttctggtgcagtgtaatttggaatagtattgtttaaatagtttagatgatcacttccataaaaacttgatacactaagtggatattctttctc |
4845852 |
T |
|
| Q |
201 |
caagtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatc |
248 |
Q |
| |
|
||||||| |||||||||| ||||||||| | |||||||| |||||||| |
|
|
| T |
4845851 |
caagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatc |
4845804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 4630986 - 4631258
Alignment:
| Q |
1 |
tgtaaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagt |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| || || |||| |
|
|
| T |
4630986 |
tgtaatcttaccatataagtaaaagaagaatcaacttcaaaattccaagttacattgtaatcctttgttgcatccattccataacttctcgcagttaagt |
4631085 |
T |
|
| Q |
101 |
atacagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctc |
200 |
Q |
| |
|
| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||| || |||||||||||| |||||||||||||||| |
|
|
| T |
4631086 |
aaacagcttctggtgcagtgtaatttgaaatggtattgtttaaatagtttagatgat---gtccaaaataacttgatacactaagtggatattctttctc |
4631182 |
T |
|
| Q |
201 |
caagtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatcttggttggctggaacttgattttgacca |
276 |
Q |
| |
|
||||||| |||||||||| ||||||||| | |||||||| |||||||| | || | |||||||||||||| |||| |
|
|
| T |
4631183 |
caagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcataatttggtggaacttgattttcacca |
4631258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 4663050 - 4663294
Alignment:
| Q |
1 |
tgtaaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagt |
100 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||| |||| || || |||| |
|
|
| T |
4663050 |
tgtaaccttaccatgtatgtaaaagaagaatcaacctcaaaattccaagttacattataatcctctgtcacatactttccataatttcttgcagttaagt |
4663149 |
T |
|
| Q |
101 |
atacagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctc |
200 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||| |||| |
|
|
| T |
4663150 |
atacagtttctggtgcagtgtaatttggaatggtattgtttaaatagtttagatgatc---tccaaaatcacttgatacactttgtggatattctatctc |
4663246 |
T |
|
| Q |
201 |
caagtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatc |
248 |
Q |
| |
|
||||||| ||||| |||| || |||||| ||||||||| |||||||| |
|
|
| T |
4663247 |
caagtaacgaggagaatcattttcccaataacgaaacatacctgtatc |
4663294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 4783871 - 4783597
Alignment:
| Q |
1 |
tgtaaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagt |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| || || |||| |
|
|
| T |
4783871 |
tgtaaccttaccatataagtaaaagcagaatcaacttcaaagttccaagttacattgtaatcctctgtctcatacattccataacttcttgcagttaagt |
4783772 |
T |
|
| Q |
101 |
atacagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctc |
200 |
Q |
| |
|
| ||| |||||||||||||||||||||||||| ||||||| ||| |||| | || | | | ||||||||||||| ||| || |||||||| |
|
|
| T |
4783771 |
aaacaccttctggtgcaatgtaatttggaatgacattgtttttatatgttaggttat---gtgtaaagtcacttgatacactagatgggtactctttctc |
4783675 |
T |
|
| Q |
201 |
caagtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatcttggttggctggaacttgattttgaccaac |
278 |
Q |
| |
|
||||||| ||||| |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4783674 |
caagtaacgaggagaatcattgtcccaattacgaaacatgcctgtatcttggtttgctggaacttgattttgaccaac |
4783597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 4816300 - 4816026
Alignment:
| Q |
1 |
tgtaaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagt |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| || || |||| |
|
|
| T |
4816300 |
tgtaaccttaccatataagtaaaagcagaatcaacttcaaagttccaagttacattgtaatcctctgtctcatacattccataacttcttgcagttaagt |
4816201 |
T |
|
| Q |
101 |
atacagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctc |
200 |
Q |
| |
|
| ||| |||||||||||||||||||||||||| ||||||| ||| |||| | || | | | ||||||||||||| ||| || |||||||| |
|
|
| T |
4816200 |
aaacaccttctggtgcaatgtaatttggaatgacattgtttttatatgttaggttat---gtgtaaagtcacttgatacactagatgggtactctttctc |
4816104 |
T |
|
| Q |
201 |
caagtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatcttggttggctggaacttgattttgaccaac |
278 |
Q |
| |
|
||||||| ||||| |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4816103 |
caagtaacgaggagaatcattgtcccaattacgaaacatgcctgtatcttggtttgctggaacttgattttgaccaac |
4816026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 4653579 - 4653853
Alignment:
| Q |
1 |
tgtaaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagt |
100 |
Q |
| |
|
|||||||| |||||||||||||| | || ||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||| || || | || |
|
|
| T |
4653579 |
tgtaacctgaccatataagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggt |
4653678 |
T |
|
| Q |
101 |
atacagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctc |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||| || || || |||||||||||||| ||||||||| |||||| |
|
|
| T |
4653679 |
atacagcttctggtgcgatgtaatttggaattgtattgtttttatagttgagatgat---ttacaaaatcacttgatacacttagtggatattgtttctc |
4653775 |
T |
|
| Q |
201 |
caagtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatcttggttggctggaacttgattttgaccaac |
278 |
Q |
| |
|
|||||| ||||| ||||||| |||||| ||||||||| || |||||| |||| | |||||||||||||| |||||| |
|
|
| T |
4653776 |
taagtaacgaggataatcgttatcccaattacgaaacaaaccagtatctaggtttggtggaacttgattttcaccaac |
4653853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 4 - 248
Target Start/End: Original strand, 4667000 - 4667244
Alignment:
| Q |
4 |
aaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagtata |
103 |
Q |
| |
|
||||||||||||||||||||| ||||||||| | ||||||||| || ||||| |||| |||| | ||||||||||||||||||| || || ||||| | |
|
|
| T |
4667000 |
aaccttaccatataagtaaaaatagaatcaactttaaaattccatgtcacattataattctctttggcatccattccataacttcttgcagttaagtaca |
4667099 |
T |
|
| Q |
104 |
cagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctccaa |
203 |
Q |
| |
|
|| ||||||||||| ||||||||||||| ||||| | |||||||||| |||||||| |||| || |||||||| ||||||||||||| ||||||||| |
|
|
| T |
4667100 |
caacttctggtgcagtgtaatttggaatagtattttgtaaatagtttggatgatcaggtccaaaataacttgatatgctttgtggatattgtttctccaa |
4667199 |
T |
|
| Q |
204 |
gtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatc |
248 |
Q |
| |
|
|||| |||||||||| ||||||||| |||||||||| || ||||| |
|
|
| T |
4667200 |
gtaacgaggaaaatcattgtcccaattacgaaacataccagtatc |
4667244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 269
Target Start/End: Complemental strand, 4697223 - 4696961
Alignment:
| Q |
4 |
aaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagtata |
103 |
Q |
| |
|
||||||||||||||||||||| | |||||| || |||||||||||||||||| |||||||||||||||||| |||| |||||| || || ||||| | |
|
|
| T |
4697223 |
aaccttaccatataagtaaaaccaacatcaacttcgaaattccaagttacattgaaatcctctgtctcatccaatccacgacttcttgcagttaagtaca |
4697124 |
T |
|
| Q |
104 |
cagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctccaa |
203 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| |||||| |||||| ||||||| | | || ||||||||| ||||||||||||| ||||||||| |
|
|
| T |
4697123 |
cagcttctggtgcagtgtaattttgaatggtgttgttttcatagttaagatgat---gtttaaaatcacttgatatgctttgtggatattgtttctccaa |
4697027 |
T |
|
| Q |
204 |
gtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatcttggttggctggaacttgatt |
269 |
Q |
| |
|
|||| |||||||||| |||||||| |||||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
4697026 |
gtaacgaggaaaatcattgtcccagttacgaaacataccagtatcttggtttggtggaacttgatt |
4696961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 4863981 - 4864225
Alignment:
| Q |
1 |
tgtaaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagt |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||| | ||| |||||||| || || |||| |
|
|
| T |
4863981 |
tgtaaccttaccatataagtaaaattagaatcaacttcaaaattccaagttacattgtactcctctgtggcatactgtccgtaacttcttgcagttaagt |
4864080 |
T |
|
| Q |
101 |
atacagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctc |
200 |
Q |
| |
|
| ||| ||||||||||| |||||||| ||||||| |||||| |||||| ||||||| | | || ||||||||| ||||||||||||| |||||| |
|
|
| T |
4864081 |
acacaacttctggtgcagtgtaattttgaatggtgttgttttcatagttaagatgat---gtttaaaatcacttgatatgctttgtggatattgtttctc |
4864177 |
T |
|
| Q |
201 |
caagtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatc |
248 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||||| || ||||| |
|
|
| T |
4864178 |
caagtaacgaggaaaatcattgtcccaattacgaaacataccagtatc |
4864225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 4636916 - 4637190
Alignment:
| Q |
1 |
tgtaaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagt |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||| |||||||| |||||| |||||||| || || |||| |
|
|
| T |
4636916 |
tgtaaccttaccatataagtaaaagcagaatcaacttcaaagttccaagttacattataatcctttgtctcatacattccgtaacttcttgcagttaagt |
4637015 |
T |
|
| Q |
101 |
atacagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctc |
200 |
Q |
| |
|
| ||| |||||||||||||||||||||||||| ||||||| ||| |||| | || | | | ||||||||||||| ||| || |||||||| |
|
|
| T |
4637016 |
acacaacttctggtgcaatgtaatttggaatgacattgtttttatatgttaggttat---gtgtaaagtcacttgatacactagatgggtactctttctc |
4637112 |
T |
|
| Q |
201 |
caagtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatcttggttggctggaacttgattttgaccaac |
278 |
Q |
| |
|
|||||||||||||||||| ||| ||||| | |||||||| |||||||| | | | ||||||||||||||||||||| |
|
|
| T |
4637113 |
caagtaaagaggaaaatcattgccccaattgcgaaacatacctgtatcatcacttggtggaacttgattttgaccaac |
4637190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 103 - 278
Target Start/End: Original strand, 4643868 - 4644040
Alignment:
| Q |
103 |
acagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctcca |
202 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| | ||||| || ||||||| ||| | ||||||| |||||||| |
|
|
| T |
4643868 |
acagcttctggtgcagtgtaatttggaatggcattttttaaatagtttagatgatg---ttcataatcatttgatacgcttagcggatattgtttctcca |
4643964 |
T |
|
| Q |
203 |
agtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatcttggttggctggaacttgattttgaccaac |
278 |
Q |
| |
|
||||| ||||| |||| ||||||||| |||||||||| |||||||||||||| | |||||||||| || ||||||| |
|
|
| T |
4643965 |
agtaacgaggataatcattgtcccaattacgaaacatacctgtatcttggtttggtggaacttgaattcgaccaac |
4644040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 76 - 248
Target Start/End: Original strand, 4672837 - 4673006
Alignment:
| Q |
76 |
attccataacttctagcggtcaagtatacagcttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttg |
175 |
Q |
| |
|
|||||||||||||| || || | ||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| | ||| |||||| |
|
|
| T |
4672837 |
attccataacttcttgcagttacgtaaacagcttctggtgcagtgtaatttggaatggtattgtttaaaaagttgagatgatgcat---atactcacttg |
4672933 |
T |
|
| Q |
176 |
atacactttgtggatattctttctccaagtaaagaggaaaatcgttgtcccaactacgaaacatgcctgtatc |
248 |
Q |
| |
|
||||||| ||||||||| ||||||||||||| | ||||||| ||||||||| |||||||||| || ||||| |
|
|
| T |
4672934 |
atacactaagtggatattgtttctccaagtaaccatgaaaatcattgtcccaattacgaaacataccagtatc |
4673006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4672735 - 4672790
Alignment:
| Q |
1 |
tgtaaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacatt |
56 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4672735 |
tgtaaccttaccatataagtgaaagaagaatcaacctcaaaattccaagttacatt |
4672790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4643730 - 4643791
Alignment:
| Q |
1 |
tgtaaccttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatc |
62 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4643730 |
tgtaaccttaccatataagtaaaaccagaatcaacctcaaaattccaagttacattgaaatc |
4643791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 4647584 - 4647625
Alignment:
| Q |
2 |
gtaaccttaccatataagtaaaagaagaatcaacctcaaaat |
43 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
4647584 |
gtaaccttaccatataagtaaaaccagaatcaacttcaaaat |
4647625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 18925772 - 18925537
Alignment:
| Q |
7 |
cttaccatataagtaaaagaagaatcaacctcaaaattccaagttacattgtaatcctctgtctcatccattccataacttctagcggtcaagtatacag |
106 |
Q |
| |
|
||||||| ||||||||| | ||||||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||||||| || || ||||||||| |
|
|
| T |
18925772 |
cttaccaaataagtaaaggcagaatcaacttcaaaattccaagttacattataatcctttgtcgcatccattccataacttcttgcagttaagtatacaa |
18925673 |
T |
|
| Q |
107 |
cttctggtgcaatgtaatttggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactttgtggatattctttctccaagta |
206 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||| |||||| |||| || | | || || ||||||||||| ||||||||| |||||||||||| |
|
|
| T |
18925672 |
cttctggtgccgtgtagtttggaatggtattgtttatatagttgagattat---gtgtaaaatcatttgatacacttagtggatattgtttctccaagta |
18925576 |
T |
|
| Q |
207 |
aagaggaaaatcgttgtcccaactacgaaacatgcctgt |
245 |
Q |
| |
|
| |||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
18925575 |
acgaggaaaatcgttgtcccaataacgaaacatacctgt |
18925537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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