View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1902_high_12 (Length: 238)

Name: NF1902_high_12
Description: NF1902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1902_high_12
NF1902_high_12
[»] chr2 (34 HSPs)
chr2 (44-238)||(27464576-27464771)
chr2 (102-238)||(11006978-11007112)
chr2 (102-238)||(40458921-40459057)
chr2 (112-232)||(3409198-3409318)
chr2 (152-232)||(29806956-29807036)
chr2 (99-178)||(1094454-1094533)
chr2 (101-238)||(10412439-10412576)
chr2 (99-232)||(41332228-41332361)
chr2 (101-232)||(44740493-44740624)
chr2 (112-238)||(24844670-24844796)
chr2 (112-237)||(16544016-16544141)
chr2 (129-238)||(28968847-28968956)
chr2 (102-198)||(13829878-13829974)
chr2 (101-232)||(9753106-9753236)
chr2 (101-232)||(34116183-34116314)
chr2 (115-237)||(12070519-12070641)
chr2 (126-235)||(17616291-17616400)
chr2 (125-232)||(11027931-11028038)
chr2 (101-232)||(30713155-30713286)
chr2 (127-198)||(38409615-38409686)
chr2 (131-228)||(20203728-20203825)
chr2 (106-238)||(17368994-17369125)
chr2 (97-200)||(2647016-2647119)
chr2 (101-232)||(33831494-33831625)
chr2 (99-232)||(9963756-9963889)
chr2 (112-233)||(33163989-33164110)
chr2 (101-232)||(27634670-27634801)
chr2 (112-238)||(36538666-36538792)
chr2 (111-200)||(2578088-2578177)
chr2 (112-172)||(14103277-14103337)
chr2 (130-230)||(27902451-27902551)
chr2 (152-232)||(40680260-40680339)
chr2 (97-202)||(2328331-2328436)
chr2 (153-213)||(31000891-31000951)
[»] chr3 (31 HSPs)
chr3 (99-232)||(12710699-12710832)
chr3 (99-238)||(30662135-30662274)
chr3 (99-232)||(26049550-26049683)
chr3 (102-232)||(20550212-20550342)
chr3 (102-228)||(40943561-40943687)
chr3 (101-232)||(9505131-9505262)
chr3 (93-221)||(15822370-15822498)
chr3 (101-238)||(52199428-52199565)
chr3 (112-232)||(18074586-18074706)
chr3 (112-238)||(39469535-39469661)
chr3 (102-232)||(52934812-52934942)
chr3 (102-232)||(54393453-54393583)
chr3 (125-238)||(33438735-33438848)
chr3 (104-232)||(25253704-25253832)
chr3 (104-238)||(46293217-46293351)
chr3 (97-232)||(39942810-39942945)
chr3 (106-223)||(48730856-48730973)
chr3 (106-238)||(26136337-26136469)
chr3 (112-228)||(39135364-39135480)
chr3 (102-232)||(54432187-54432331)
chr3 (97-232)||(19560784-19560919)
chr3 (113-232)||(28242594-28242713)
chr3 (97-182)||(5418673-5418758)
chr3 (95-172)||(31589615-31589692)
chr3 (153-205)||(33691953-33692005)
chr3 (101-238)||(32689168-32689305)
chr3 (97-181)||(28700992-28701076)
chr3 (156-228)||(38643560-38643632)
chr3 (151-233)||(1674678-1674760)
chr3 (116-232)||(28687086-28687202)
chr3 (101-232)||(41609887-41610017)
[»] chr1 (54 HSPs)
chr1 (99-232)||(28006347-28006480)
chr1 (102-233)||(5204478-5204609)
chr1 (99-238)||(24575906-24576045)
chr1 (102-238)||(50447341-50447477)
chr1 (93-232)||(39802777-39802916)
chr1 (93-232)||(47983246-47983385)
chr1 (96-237)||(31816562-31816703)
chr1 (102-232)||(29677529-29677659)
chr1 (102-232)||(40159640-40159770)
chr1 (102-238)||(15257175-15257311)
chr1 (102-232)||(7956324-7956454)
chr1 (112-232)||(7995981-7996101)
chr1 (93-229)||(48575093-48575229)
chr1 (102-232)||(38061188-38061318)
chr1 (111-232)||(44596526-44596647)
chr1 (101-232)||(31869593-31869724)
chr1 (101-232)||(15306492-15306623)
chr1 (152-238)||(7016079-7016165)
chr1 (102-232)||(35810718-35810848)
chr1 (102-232)||(42916124-42916254)
chr1 (112-238)||(45581012-45581138)
chr1 (135-232)||(6413272-6413369)
chr1 (153-232)||(7841674-7841752)
chr1 (102-232)||(46264954-46265084)
chr1 (102-232)||(7596393-7596523)
chr1 (126-232)||(15014339-15014445)
chr1 (125-238)||(14578589-14578702)
chr1 (99-232)||(23915607-23915740)
chr1 (102-238)||(27076519-27076655)
chr1 (125-232)||(25124895-25125002)
chr1 (97-200)||(43087508-43087611)
chr1 (133-238)||(12224579-12224684)
chr1 (125-232)||(21680666-21680773)
chr1 (125-232)||(45653442-45653548)
chr1 (115-232)||(30251437-30251555)
chr1 (101-238)||(47602866-47603003)
chr1 (97-232)||(19508523-19508658)
chr1 (101-232)||(24469827-24469958)
chr1 (101-232)||(32179857-32179988)
chr1 (156-238)||(572420-572502)
chr1 (104-193)||(14796590-14796679)
chr1 (104-193)||(14805464-14805553)
chr1 (125-238)||(23916833-23916946)
chr1 (112-232)||(20347676-20347796)
chr1 (112-232)||(20349156-20349276)
chr1 (101-232)||(36419100-36419231)
chr1 (93-232)||(42937065-42937204)
chr1 (101-238)||(3577669-3577807)
chr1 (125-195)||(15662972-15663042)
chr1 (112-232)||(7702845-7702965)
chr1 (93-236)||(29113531-29113673)
chr1 (101-168)||(40002893-40002960)
chr1 (113-178)||(11991283-11991348)
chr1 (153-238)||(36119122-36119207)
[»] chr5 (44 HSPs)
chr5 (88-238)||(27196063-27196213)
chr5 (102-232)||(27450591-27450721)
chr5 (96-238)||(32945025-32945167)
chr5 (102-238)||(39407406-39407542)
chr5 (102-232)||(26299847-26299977)
chr5 (104-232)||(26298313-26298441)
chr5 (102-232)||(34719667-34719797)
chr5 (105-232)||(34724764-34724891)
chr5 (102-232)||(10493985-10494115)
chr5 (93-238)||(10327921-10328066)
chr5 (102-232)||(3801374-3801504)
chr5 (111-232)||(34857356-34857477)
chr5 (102-232)||(19716183-19716308)
chr5 (102-232)||(38522871-38523001)
chr5 (101-232)||(1840697-1840828)
chr5 (111-238)||(24536016-24536143)
chr5 (93-232)||(36523742-36523885)
chr5 (97-238)||(39414176-39414318)
chr5 (97-238)||(41783320-41783461)
chr5 (102-198)||(1225351-1225447)
chr5 (151-231)||(28431104-28431184)
chr5 (112-236)||(40056369-40056493)
chr5 (131-238)||(5382829-5382936)
chr5 (125-238)||(20188996-20189109)
chr5 (165-238)||(28247473-28247546)
chr5 (152-237)||(31021913-31021998)
chr5 (102-238)||(39409140-39409262)
chr5 (125-233)||(2676039-2676147)
chr5 (98-238)||(31620864-31621004)
chr5 (102-190)||(34723705-34723793)
chr5 (97-232)||(14500716-14500851)
chr5 (101-231)||(1091123-1091252)
chr5 (152-238)||(17168447-17168533)
chr5 (106-230)||(30660919-30661043)
chr5 (123-198)||(20190628-20190703)
chr5 (101-228)||(3457825-3457956)
chr5 (101-232)||(15933159-15933293)
chr5 (102-237)||(19282119-19282254)
chr5 (97-200)||(26218042-26218145)
chr5 (101-232)||(27906097-27906228)
chr5 (102-168)||(28246732-28246798)
chr5 (97-200)||(11136049-11136151)
chr5 (102-156)||(32157023-32157077)
chr5 (111-200)||(33326469-33326558)
[»] chr4 (69 HSPs)
chr4 (99-232)||(12673038-12673171)
chr4 (96-238)||(49405639-49405781)
chr4 (99-238)||(46944548-46944687)
chr4 (102-232)||(40797830-40797960)
chr4 (102-232)||(51995078-51995208)
chr4 (101-238)||(24007907-24008044)
chr4 (102-232)||(80497-80627)
chr4 (88-216)||(39736669-39736797)
chr4 (102-238)||(51407953-51408089)
chr4 (111-230)||(34980516-34980635)
chr4 (96-238)||(48802479-48802622)
chr4 (101-238)||(11055230-11055367)
chr4 (101-238)||(55891989-55892126)
chr4 (102-232)||(9222142-9222270)
chr4 (102-238)||(13455701-13455837)
chr4 (102-232)||(26632936-26633066)
chr4 (99-225)||(48151143-48151269)
chr4 (101-238)||(19455162-19455299)
chr4 (102-191)||(25134574-25134663)
chr4 (101-232)||(28265683-28265811)
chr4 (102-238)||(1803498-1803629)
chr4 (102-238)||(9469777-9469913)
chr4 (102-232)||(22184503-22184633)
chr4 (88-232)||(44378236-44378368)
chr4 (96-237)||(28470813-28470953)
chr4 (102-238)||(36543781-36543917)
chr4 (125-232)||(36156304-36156411)
chr4 (125-232)||(50146928-50147035)
chr4 (93-210)||(43798255-43798372)
chr4 (125-198)||(48339143-48339216)
chr4 (102-238)||(56224145-56224281)
chr4 (97-200)||(22721323-22721425)
chr4 (101-232)||(52813600-52813731)
chr4 (152-238)||(9874212-9874298)
chr4 (112-238)||(15697087-15697213)
chr4 (112-232)||(48731183-48731303)
chr4 (125-196)||(6866149-6866220)
chr4 (99-232)||(16742346-16742468)
chr4 (125-200)||(43812099-43812174)
chr4 (101-232)||(50606007-50606138)
chr4 (97-179)||(7505524-7505606)
chr4 (156-232)||(43387311-43387387)
chr4 (97-237)||(49083239-49083379)
chr4 (104-172)||(50710840-50710908)
chr4 (104-196)||(52733747-52733838)
chr4 (101-232)||(12789562-12789693)
chr4 (101-232)||(21441580-21441711)
chr4 (151-238)||(36643989-36644075)
chr4 (97-172)||(52706212-52706287)
chr4 (101-232)||(53369871-53370002)
chr4 (142-232)||(4274566-4274656)
chr4 (152-238)||(9959382-9959467)
chr4 (111-193)||(25102646-25102728)
chr4 (112-238)||(27891397-27891522)
chr4 (115-233)||(34718152-34718270)
chr4 (184-238)||(50710788-50710842)
chr4 (112-229)||(44791256-44791373)
chr4 (152-232)||(38791742-38791821)
chr4 (93-148)||(15564208-15564263)
chr4 (93-148)||(15576855-15576910)
chr4 (101-232)||(19852977-19853108)
chr4 (88-183)||(26127555-26127650)
chr4 (125-228)||(32397712-32397815)
chr4 (101-232)||(45674834-45674965)
chr4 (101-232)||(48977575-48977706)
chr4 (93-198)||(24550068-24550174)
chr4 (152-198)||(38493032-38493078)
chr4 (127-220)||(13761824-13761917)
chr4 (153-214)||(41857120-41857181)
[»] scaffold0171 (1 HSPs)
scaffold0171 (88-238)||(21074-21223)
[»] chr7 (48 HSPs)
chr7 (102-232)||(18250003-18250133)
chr7 (99-238)||(17025365-17025504)
chr7 (99-232)||(18740228-18740361)
chr7 (101-238)||(21760587-21760724)
chr7 (99-232)||(46573622-46573755)
chr7 (102-237)||(26719820-26719955)
chr7 (102-229)||(49034237-49034364)
chr7 (102-238)||(35543560-35543693)
chr7 (102-238)||(36472444-36472580)
chr7 (104-238)||(33898948-33899082)
chr7 (99-238)||(23227003-23227142)
chr7 (99-238)||(23236156-23236295)
chr7 (117-238)||(33019321-33019442)
chr7 (125-238)||(37401570-37401683)
chr7 (104-238)||(32356968-32357102)
chr7 (111-216)||(29037806-29037911)
chr7 (102-238)||(7447881-7448017)
chr7 (102-238)||(31491820-31491956)
chr7 (112-232)||(33124710-33124830)
chr7 (101-232)||(222236-222367)
chr7 (101-232)||(33935512-33935643)
chr7 (101-231)||(10618925-10619055)
chr7 (101-232)||(44421911-44422043)
chr7 (102-232)||(22075068-22075198)
chr7 (101-194)||(30919426-30919519)
chr7 (99-232)||(33171544-33171677)
chr7 (101-232)||(37334282-37334413)
chr7 (97-232)||(45055728-45055863)
chr7 (101-232)||(45176249-45176380)
chr7 (125-238)||(3942204-3942317)
chr7 (97-238)||(11595800-11595941)
chr7 (111-232)||(48634461-48634582)
chr7 (112-220)||(10096486-10096594)
chr7 (101-232)||(5776140-5776271)
chr7 (101-232)||(36927003-36927134)
chr7 (152-238)||(41449795-41449881)
chr7 (159-233)||(46652642-46652716)
chr7 (125-198)||(27231583-27231656)
chr7 (112-232)||(665857-665977)
chr7 (102-232)||(17608717-17608844)
chr7 (97-172)||(23237587-23237662)
chr7 (153-232)||(24128510-24128589)
chr7 (101-232)||(43052876-43053007)
chr7 (97-238)||(40480054-40480196)
chr7 (101-232)||(5794946-5795077)
chr7 (98-232)||(20400997-20401131)
chr7 (101-179)||(48505851-48505929)
chr7 (101-193)||(37101148-37101239)
[»] chr6 (23 HSPs)
chr6 (102-232)||(13312022-13312154)
chr6 (102-232)||(3081728-3081858)
chr6 (102-238)||(7437304-7437440)
chr6 (96-232)||(18095513-18095649)
chr6 (96-232)||(18099810-18099946)
chr6 (96-232)||(17441151-17441288)
chr6 (102-232)||(4441311-4441441)
chr6 (125-232)||(5640262-5640369)
chr6 (112-238)||(1501858-1501984)
chr6 (154-232)||(11460024-11460102)
chr6 (113-225)||(6999278-6999390)
chr6 (125-196)||(10961842-10961913)
chr6 (97-232)||(33110453-33110588)
chr6 (127-200)||(27984932-27985005)
chr6 (112-196)||(32163551-32163635)
chr6 (125-172)||(9950830-9950877)
chr6 (93-165)||(30774029-30774101)
chr6 (113-175)||(2156010-2156072)
chr6 (112-162)||(2962782-2962832)
chr6 (98-232)||(10346717-10346851)
chr6 (101-139)||(12428886-12428924)
chr6 (127-237)||(17507274-17507384)
chr6 (88-149)||(2958404-2958465)
[»] scaffold0223 (1 HSPs)
scaffold0223 (96-238)||(14420-14562)
[»] scaffold0135 (1 HSPs)
scaffold0135 (102-232)||(32795-32923)
[»] chr8 (17 HSPs)
chr8 (142-232)||(43384834-43384924)
chr8 (101-233)||(1091726-1091858)
chr8 (101-232)||(3307933-3308064)
chr8 (97-233)||(27189091-27189227)
chr8 (141-232)||(39478089-39478180)
chr8 (125-200)||(23181178-23181253)
chr8 (142-232)||(12378392-12378482)
chr8 (101-232)||(453482-453613)
chr8 (102-229)||(22564006-22564133)
chr8 (97-179)||(43967505-43967587)
chr8 (126-234)||(32740663-32740771)
chr8 (97-232)||(34655030-34655165)
chr8 (152-238)||(33279981-33280067)
chr8 (88-232)||(9412534-9412678)
chr8 (101-232)||(11161571-11161702)
chr8 (125-232)||(34516161-34516268)
chr8 (152-194)||(43955884-43955926)
[»] scaffold0224 (1 HSPs)
scaffold0224 (102-232)||(7318-7448)
[»] scaffold0002 (1 HSPs)
scaffold0002 (95-237)||(96273-96415)
[»] scaffold0063 (1 HSPs)
scaffold0063 (95-232)||(51312-51449)
[»] scaffold0444 (1 HSPs)
scaffold0444 (88-232)||(789-921)
[»] scaffold0204 (1 HSPs)
scaffold0204 (125-198)||(26665-26738)
[»] scaffold0025 (1 HSPs)
scaffold0025 (104-237)||(11392-11525)
[»] scaffold0022 (1 HSPs)
scaffold0022 (112-232)||(124491-124611)
[»] scaffold0263 (1 HSPs)
scaffold0263 (95-164)||(17228-17297)
[»] scaffold0260 (2 HSPs)
scaffold0260 (112-232)||(9999-10119)
scaffold0260 (112-232)||(11479-11599)
[»] scaffold0954 (1 HSPs)
scaffold0954 (97-172)||(254-329)
[»] scaffold0316 (1 HSPs)
scaffold0316 (101-232)||(19295-19426)


Alignment Details
Target: chr2 (Bit Score: 136; Significance: 4e-71; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 44 - 238
Target Start/End: Complemental strand, 27464771 - 27464576
Alignment:
Q  44 tttaagagtgccaaattcaatagaaaaagtcaac-ttaattaacagaatgatacataactcaagttcgactcatttatttagcgaacttaattttcaatt 142  Q
    |||||||||||||||||||||||||||||||||| ||| ||||   |||||||||||| |||||| | |||| ||||||||| |||||||||||||||||    
T  27464771 tttaagagtgccaaattcaatagaaaaagtcaaccttagttaattaaatgatacataattcaagtccaactcctttatttagggaacttaattttcaatt 27464672  T
Q  143 caagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  27464671 caagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcaagtctcgaactattttcgagttggttcggttcattgtcagc 27464576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 11007112 - 11006978
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| ||| |||||||||||| ||||||| |||||||||||||| |||||||| |||||| |||||||||||| ||||||      
T  11007112 tcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaatcaattatcggatcgag-- 11007015  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    || |||||||||||| ||||||||||||||| |||||    
T  11007014 tcaaactattttcgagttggttcggttcattgtcagc 11006978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 40458921 - 40459057
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||||||||||| ||| |||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| ||||||| |||||||||     
T  40458921 tcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattattgaatcgagta 40459020  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    || |||||||||| | ||||||||||||||| |||||    
T  40459021 tcaaactattttcaagttggttcggttcattgtcagc 40459057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 3409318 - 3409198
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||||||| |||||||||||||||  |||||||    |||||||||||||||||||| |||||| | | |||| ||||||||||| ||||||||||    
T  3409318 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 3409219  T
Q  212 ttcgaattggttcggttcatt 232  Q
     |||| |||||||||||||||    
T  3409218 gtcgagttggttcggttcatt 3409198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 29806956 - 29807036
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||||||| | |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29806956 ctcatttggttcgtaaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgaattggttcggttcatt 29807036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 1094454 - 1094533
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaa 178  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  1094454 aactcaagttcgactcatttattcaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaattcaa 1094533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 238
Target Start/End: Original strand, 10412439 - 10412576
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||| | ||||||||||||| ||| ||||||||| || ||||||| ||||||| | ||| | ||||| |||| ||| ||  ||||| |||||||| |    
T  10412439 ctcaagtccaactcatttatttaacgagcttaatttttaactcaagttcgactcatctagtttacgaaccgaatttaacgaactaattaccgaatcgaat 10412538  T
Q  201 ctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  10412539 ctcgaactattttcgagttggtttggttcattatcagc 10412576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 41332228 - 41332361
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||| ||||| | |||||||||| | |||||||||||||  |||| ||  ||||| |||||| ||||||||| |||||||| | |||| |||||||||    
T  41332228 aactcatgttcggcccatttatttaacaaacttaattttcagctcaaattcaactcaattggtttatgaaccaagttcaacaagttaattgtcgaatcga 41332327  T
Q  199 gtctcgaactattttcgaattggttcggttcatt 232  Q
    || ||||||||| ||||| |||||| ||||||||    
T  41332328 gtttcgaactatattcgagttggtttggttcatt 41332361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 44740624 - 44740493
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  ||||||| |||| ||||||||||||| |  |||||||   ||| ||||||||||||||||| |||||| | | |||| |||||||||||    
T  44740624 ctcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagt 44740525  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
    | | ||||||| |||| |||||||||||||||    
T  44740524 cccaaactattgtcgagttggttcggttcatt 44740493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 24844796 - 24844670
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||||||| |||| ||||||||||  |||||||   ||||||||||||||||||||| |||||| |   ||||  |||||||||| ||||||||||    
T  24844796 ctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagataattgccgaatcgagtttcgaactatt 24844697  T
Q  212 ttcgaattggttcggttcattatcagc 238  Q
     |||| ||||||||| ||||| |||||    
T  24844696 atcgagttggttcggatcattgtcagc 24844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 16544016 - 16544141
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||||||| ||||||||||||| || |||| ||  | | ||||||||  |||||||| ||||||||||  ||||||||||||||||| ||||| ||    
T  16544016 ctcatttatttaacgaacttaatttttaactcaaattcaaattatttggttggtgaaccaagttcaacaaatacattatcgaatcgagtcttgaactttt 16544115  T
Q  212 ttcgaattggttcggttcattatcag 237  Q
    | ||| ||| ||||||||||| ||||    
T  16544116 tccgagttgcttcggttcattgtcag 16544141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 28968847 - 28968956
Alignment:
Q  129 cttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggtt 228  Q
    |||||||||||| |||| |||||||||||||||||| ||||  |||||||| | | ||||||||||||||||||| ||||||| |||  ||| || ||||    
T  28968847 cttaattttcaactcaaatttgactcatttggttcacgaactgaattcaacgagttaattatcgaatcgagtctcaaactattctcgggttgatttggtt 28968946  T
Q  229 cattatcagc 238  Q
    |||| |||||    
T  28968947 cattgtcagc 28968956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 13829878 - 13829974
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||| ||||||||| ||| |||  |||||||| || |||||||  |||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  13829878 tcaagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagttcaacgaatcaattatcgaatcga 13829974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 9753106 - 9753236
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| ||||||||| ||  || |||||||||| | |||| |||   |||||||||||||||||||||| | ||| |||||||| ||||||||| |    
T  9753106 ctcaagttcaactcatttagttgccggacttaatttt-agttcacgttcttctcatttggttcatgaaccaaacttaacgaatcaattgtcgaatcgaat 9753204  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||| | ||||| |||| ||||||||||    
T  9753205 ctcgaactttgttcgacttggctcggttcatt 9753236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 34116314 - 34116183
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||| ||||||||||||||||||||| |  ||||||| | |||||||||||||||||| || ||| |||||||||||||  |||||| |    
T  34116314 ctcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcatttggttcatgaactaagttcgacaaatcaattattaaatcgaat 34116215  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
      |||||| |  |||| ||||||||| |||||    
T  34116214 tacgaactctaatcgagttggttcggctcatt 34116183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 12070641 - 12070519
Alignment:
Q  115 atttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttc 214  Q
    |||| |||| |||| ||||||||||| ||||||| || |||||| ||| | ||| |||||||||| ||| ||||| ||||| ||||||| ||||||||||    
T  12070641 atttgtttaacgaatttaattttcaactcaagttcgattcatttagttgacgaatcaaattcaacgaattaattaccgaattgagtctcaaactattttc 12070542  T
Q  215 gaattggttcggttcattatcag 237  Q
    ||| | ||||  |||||||||||    
T  12070541 gaactcgttcaattcattatcag 12070519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 17616291 - 17616400
Alignment:
Q  126 gaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcg 225  Q
    |||||||||||| |  ||||||| | ||||||||||||||| | |||||||||| |   |||| ||||||||||| || |||||||||||| ||||||||    
T  17616291 gaacttaatttttagctcaagttcggctcatttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactattttcgagttggttcg 17616390  T
Q  226 gttcattatc 235  Q
     |||||||||    
T  17616391 attcattatc 17616400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 11027931 - 11028038
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    ||||||||||||| | |||||||| | ||||||||||||||||||||| ||| || ||||||||||||||| || |  |||||| |  | || |||||||    
T  11027931 cgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaattgaattacgaactctaattgagttggttc 11028030  T
Q  225 ggttcatt 232  Q
    ||||||||    
T  11028031 ggttcatt 11028038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 30713155 - 30713286
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| ||||| ||| ||  ||||||||| |||||  ||| ||| | ||||||||||||||||||||| ||| || |||||||||||||||||| |    
T  30713155 ctcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaat 30713254  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
      |||||  |  |||| |||||||||||||||    
T  30713255 tacgaacactaatcgagttggttcggttcatt 30713286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 198
Target Start/End: Complemental strand, 38409686 - 38409615
Alignment:
Q  127 aacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||||||||  ||||||| | ||||||||||||||||||||||||| || |||||||| |||||||||    
T  38409686 aacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcgacgaatcaattgtcgaatcga 38409615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 20203825 - 20203728
Alignment:
Q  131 taattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggtt 228  Q
    |||||||||  ||| ||||||||||||||||||||||||||| |||||| |||||||| | ||||||| |  |||||| |  |||| |||||||||||    
T  20203825 taattttcagctcaggtttgactcatttggttcatgaaccaagttcaacgaatcaattgttgaatcgaattacgaactttaatcgagttggttcggtt 20203728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 17369125 - 17368994
Alignment:
Q  106 gttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcga 205  Q
    |||| ||||||||| ||| | || ||||||||||| ||||||| |||||| ||||||||| ||| ||||||||| | | |||| |||| | ||||  |||    
T  17369125 gttcaactcatttacttaacaaatttaattttcaactcaagttcgactca-ttggttcataaactaaattcaacgagttaattgtcgagttgagttccga 17369027  T
Q  206 actattttcgaattggttcggttcattatcagc 238  Q
    ||||| ||||| |||| |||||||||| |||||    
T  17369026 actatattcgagttggctcggttcattgtcagc 17368994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 2647119 - 2647016
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||| |  ||||||| | ||| ||||||||||||||||| |||||| ||  ||||| ||| ||    
T  2647119 ataactcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtc 2647020  T
Q  197 gagt 200  Q
    ||||    
T  2647019 gagt 2647016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 33831494 - 33831625
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||||||||||  || |  |||||| |||| |    
T  33831494 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaattcaacggattagatatcgagtcgaat 33831593  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  33831594 gtcgaactataatcgagttggttcggttcatt 33831625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 9963756 - 9963889
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||||||  ||||||||| || ||||||||||||| || | |||||   ||||||||||||||||||| | |||||| | | |||| ||||||  |    
T  9963756 aactcaagttcagctcatttatctaacgaacttaatttttaacttaagttcagctcatttggttcatgaacccagttcaacgagttaattgtcgaattaa 9963855  T
Q  199 gtctcgaactattttcgaattggttcggttcatt 232  Q
    || ||||| |||| | ||||||  ||||||||||    
T  9963856 gtttcgaattattattgaattgactcggttcatt 9963889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 33164110 - 33163989
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || |  |||||| |||| | |||||||||     
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 33164011  T
Q  212 ttcgaattggttcggttcatta 233  Q
     |||||||||||||||||||||    
T  33164010 atcgaattggttcggttcatta 33163989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 27634670 - 27634801
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || ||||||||||| || ||||||  || || |||||| |||| |    
T  27634670 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattaaatatcgagtcgaat 27634769  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  27634770 gtcgaactataatcgagttggttcggttcatt 27634801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 36538666 - 36538792
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| |||||||||||||||  ||||||   |||| || |||||||||||||| ||||||  || |  |||||| |||| | |||||||||     
T  36538666 ctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 36538765  T
Q  212 ttcgaattggttcggttcattatcagc 238  Q
     |||| |||||| |||||||| |||||    
T  36538766 atcgagttggtttggttcattgtcagc 36538792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 2578088 - 2578177
Alignment:
Q  111 actcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||||||| |||| ||||||||||  |||||||   |||||||| |||||||| ||| |||||||| | |||| ||| |||||||    
T  2578088 actcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaatcaagttcaacaagttaattgtcgcatcgagt 2578177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 14103277 - 14103337
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaa 172  Q
    |||||||| ||| ||||||||||||||| || ||||| |||| |||||| |||||||||||    
T  14103277 ctcatttaattaacgaacttaattttcagtttaagttcgacttatttggctcatgaaccaa 14103337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 27902551 - 27902451
Alignment:
Q  130 ttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttc 229  Q
    ||||||||||  ||||||| |  |||||| ||||||||||||| ||| || |||||||| ||||||||| |  |||||| |  |||| ||||||||||||    
T  27902551 ttaattttcagctcaagttcggttcattttgttcatgaaccaagttcgacgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttc 27902452  T
Q  230 a 230  Q
    |    
T  27902451 a 27902451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 40680260 - 40680339
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||| ||||| ||| ||||||||| | |||||||||||||||| |  ||||||||| | || |||||||||||||||    
T  40680260 ctcatttgattcat-aactaaattcaacgagtcaattatcgaatcgaattccgaactattattgagttggttcggttcatt 40680339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 2328436 - 2328331
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    |||| |||||||| ||||||||||||   |   ||||||||||| |||||||||||||||||   |||||||  || || ||| ||| ||||| ||||||    
T  2328436 ataattcaagttcaactcatttatttgaagggtttaattttcaactcaagtttgactcatttaaatcatgaataaagtttaacgaattaattaccgaatc 2328337  T
Q  197 gagtct 202  Q
    ||||||    
T  2328336 gagtct 2328331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 31000891 - 31000951
Alignment:
Q  153 tcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatttt 213  Q
    |||||||||||||||| ||| |||| | ||| ||||| |||||||| |||| |||||||||    
T  31000891 tcatttggttcatgaatcaagttcatcgaattaattaccgaatcgaatctcaaactatttt 31000951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 12710699 - 12710832
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  12710699 aactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcga 12710798  T
Q  199 gtctcgaactattttcgaattggttcggttcatt 232  Q
     ||||||||||||||||| |||||||||||||||    
T  12710799 atctcgaactattttcgagttggttcggttcatt 12710832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 99 - 238
Target Start/End: Complemental strand, 30662274 - 30662135
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||| |||||||||||| |||||| | ||||||||||||||||    
T  30662274 aactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacgagtcaattatcgaatcga 30662175  T
Q  199 gtctcgaactattttcgaattggttcggttcattatcagc 238  Q
     |||| |||||||||||| ||||||||| ||||| |||||    
T  30662174 atctcaaactattttcgagttggttcggctcattgtcagc 30662135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 26049683 - 26049550
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||| ||||||||| ||| |||||||||||| ||||||| |||||||||| |||||||||||| |||||||  ||||||||||||||||    
T  26049683 aactcaagttcgactaatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacaggtcaattatcgaatcga 26049584  T
Q  199 gtctcgaactattttcgaattggttcggttcatt 232  Q
     |||| |||||||||||| |||||||||||||||    
T  26049583 atctcaaactattttcgagttggttcggttcatt 26049550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 20550342 - 20550212
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||| | ||||||||||||| |||| ||||||||||| ||| ||| |||||||||||||| |||||||| |||||||||||||||||||||||||||     
T  20550342 tcaagtacaactcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgagta 20550243  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||||||||| |||||| ||||||||    
T  20550242 tcgaactattttcgagttggtttggttcatt 20550212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 40943561 - 40943687
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||| | |||  || |||||||| ||||||||     
T  40943561 tcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcaaatcgagta 40943660  T
Q  202 tcgaactattttcgaattggttcggtt 228  Q
    ||||||||||||||| |||||||||||    
T  40943661 tcgaactattttcgagttggttcggtt 40943687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 9505262 - 9505131
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||||||| |||||||||||||||  |||||||  |||||||||||||||||||||| |||||| | | |||| |||||||||||    
T  9505262 ctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagt 9505163  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
      ||||||||| |||| |||||||||||||||    
T  9505162 tccgaactattgtcgagttggttcggttcatt 9505131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 15822498 - 15822370
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcg 192  Q
    |||| ||| ||||||||| |||||||||||  ||| |||||||||||| |||||||  ||||| |||| ||||||||||| |||||| || |||||| ||    
T  15822498 atacgtaattcaagttcggctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcatgaaccaagttcaacgaaacaattaccg 15822399  T
Q  193 aatcgagtctcgaactattttcgaattgg 221  Q
    |||||| | ||||||||||||||||||||    
T  15822398 aatcgaatttcgaactattttcgaattgg 15822370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 238
Target Start/End: Original strand, 52199428 - 52199565
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  ||||||| |||| |||||||||||||||  |||||||   ||| ||||||||||||||||| |||||| ||| |||| |||||||||||    
T  52199428 ctcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcgagt 52199527  T
Q  201 ctcgaactattttcgaattggttcggttcattatcagc 238  Q
    | | ||||||| |||| |||||||| |||||| |||||    
T  52199528 cccaaactattgtcgagttggttcgattcattgtcagc 52199565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 18074586 - 18074706
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| ||||||||||||||| ||||| ||  |||||||| ||||||||| |||||||||| ||| ||||||| |||||||||||||||| |     
T  18074586 ctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaacgaattaattatcaaatcgagtctcgaactcta 18074685  T
Q  212 ttcgaattggttcggttcatt 232  Q
    ||||| |||| || |||||||    
T  18074686 ttcgagttggctcagttcatt 18074706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 39469661 - 39469535
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| |||||||||||||||  ||||||| | |||||||| |||||||||||| |||||   | ||||||||||||||| |  ||||||||     
T  39469661 ctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcatgaaccaagttcaatggaccaattatcgaatcgaattacgaactata 39469562  T
Q  212 ttcgaattggttcggttcattatcagc 238  Q
    ||||| ||||||| |||||||||||||    
T  39469561 ttcgagttggttcagttcattatcagc 39469535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 52934812 - 52934942
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||| |||||||||||| ||||||||||||||   |||||||   ||||||||||||||||||||| |||||  | | ||||||||||||||||     
T  52934812 tcaagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagtt 52934911  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     ||||||||| || | ||||||| |||||||    
T  52934912 ccgaactattgtcaagttggttcagttcatt 52934942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 54393583 - 54393453
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||| |||| ||||||  |||||||||||||||  ||||||| | ||||||||||| ||||||||| |||||| |||||||| ||||||||| |     
T  54393583 tcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggtttatgaaccaagttcaacgaatcaattgtcgaatcgaatt 54393484  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     |||||| |  |||| |||||||||||||||    
T  54393483 acgaactttaatcgagttggttcggttcatt 54393453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 33438848 - 33438735
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||| |||||| |||||||| ||||||||| |  | |||| |  |||| |||||||    
T  33438848 cgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacaaactttaatcgagttggttc 33438749  T
Q  225 ggttcattatcagc 238  Q
    |||||||| |||||    
T  33438748 ggttcattgtcagc 33438735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 232
Target Start/End: Original strand, 25253704 - 25253832
Alignment:
Q  104 aagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctc 203  Q
    ||||||| |||||||||||| ||||||||||||| |  |||||||   ||||||||||||||||||||| |||||||| |  ||| |||| ||||||  |    
T  25253704 aagttcggctcatttatttaacgaacttaatttttagctcaagttcagctcatttggttcatgaaccaagttcaacaagtttattgtcgagtcgagttcc 25253803  T
Q  204 gaactattttcgaattggttcggttcatt 232  Q
     |||||| ||||| |||||||||||||||    
T  25253804 aaactatattcgagttggttcggttcatt 25253832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 46293351 - 46293217
Alignment:
Q  104 aagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctc 203  Q
    |||||| ||||||||| ||| |||||||||||||||  ||||||| | |||||||||||||||||||||||||||   | ||||| || | |||| | |     
T  46293351 aagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcaattgaccaattgtcaagtcgaatttt 46293252  T
Q  204 gaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||| ||||| ||| ||||||||||| |||||    
T  46293251 gaactatattcgagttgattcggttcattgtcagc 46293217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 232
Target Start/End: Complemental strand, 39942945 - 39942810
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    |||||||||||||  ||||| |||||| |||||||||||||||  |||||||   ||||||  ||||||||||||| ||||||| || ||||  ||||||    
T  39942945 ataactcaagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcattaagttcatgaaccaagttcaacagattaattgccgaatc 39942846  T
Q  197 gagtctcgaactattttcgaattggttcggttcatt 232  Q
    || | |||||||||  |||| ||||||| |||||||    
T  39942845 gaatttcgaactatactcgagttggttcagttcatt 39942810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 48730973 - 48730856
Alignment:
Q  106 gttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcga 205  Q
    |||| ||||||||||||| |||  ||||||||  | | |||||||||| |||||||||||||| ||| || ||| ||| ||||| | |||||| ||||||    
T  48730973 gttcaactcatttatttatcgagtttaattttgcacttaagtttgacttatttggttcatgaatcaagtttaacgaattaattagcaaatcgaatctcga 48730874  T
Q  206 actattttcgaattggtt 223  Q
    ||||||||||| ||||||    
T  48730873 actattttcgagttggtt 48730856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 26136337 - 26136469
Alignment:
Q  106 gttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcga 205  Q
    |||| |||||||| |||| | ||| ||||||| || ||||||| | |||| || |||||| |||||| |||||||||  ||||| ||||||||||||| |    
T  26136337 gttcaactcatttgtttaacaaacataattttgaactcaagttcggctcacttagttcataaaccaagttcaacaaactaattaacgaatcgagtctcaa 26136436  T
Q  206 actattttcgaattggttcggttcattatcagc 238  Q
    |||||| || | |||||| |||||||| |||||    
T  26136437 actattatcaagttggttgggttcattgtcagc 26136469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 39135364 - 39135480
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| |||||||||||||||  ||||||| | ||||||||||||||||||||| |||||  || ||||| |||| |||| |   |||||||     
T  39135364 ctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattatgaactata 39135463  T
Q  212 ttcgaattggttcggtt 228  Q
    ||||| |||||||||||    
T  39135464 ttcgagttggttcggtt 39135480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 54432331 - 54432187
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaa-----ca---------aatcaat 187  Q
    |||||||| ||||||||||||| ||| ||||||||| || ||||||| ||||||||| ||||||||||||| | |||     ||         || ||||    
T  54432331 tcaagttcaactcatttatttaacgagcttaatttttaactcaagttcgactcatttagttcatgaaccaagtccaatgaaccaagtccaatgaaccaat 54432232  T
Q  188 tatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||    
T  54432231 tatcgaatcgagtatcgaactattttcgagttggttcggttcatt 54432187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 232
Target Start/End: Complemental strand, 19560919 - 19560784
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    |||||||||||||| |||||||||||| || |||||| | | || |||||||   ||  ||| ||||||||||||| |||||| ||| |||| |||| ||    
T  19560919 ataactcaagttcggctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaaccaagttcaacgaattaattgtcgagtc 19560820  T
Q  197 gagtctcgaactattttcgaattggttcggttcatt 232  Q
    || |  |||||||| ||||| |||||||||||||||    
T  19560819 gaattccgaactatattcgagttggttcggttcatt 19560784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 28242594 - 28242713
Alignment:
Q  113 tcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattt 212  Q
    ||||||||||| |||| ||||||||||  |||| ||   |||||||||||||||||||||||||||| | | |||| ||||||| |||  |||| ||||     
T  28242594 tcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcaagttccgaattattg 28242693  T
Q  213 tcgaattggttcggttcatt 232  Q
    |||| ||| |||||||||||    
T  28242694 tcgagttgattcggttcatt 28242713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 182
Target Start/End: Original strand, 5418673 - 5418758
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaa 182  Q
    ||||||||||||| ||||||||| ||| |||||||||| || |  ||||||| ||||| |||||||||||||| || |||||||||    
T  5418673 ataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaa 5418758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 31589615 - 31589692
Alignment:
Q  95 acataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaa 172  Q
    ||||| ||||||||| || | |||||||| | |||||||||||||| |||||||||||| |||||||| |||||||||    
T  31589615 acatagctcaagttcaacccgtttatttaacaaacttaattttcaactcaagtttgacttatttggtttatgaaccaa 31589692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 33692005 - 33691953
Alignment:
Q  153 tcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcga 205  Q
    |||||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  33692005 tcatttagtttatgaaccaaattcaacaaatcaattgtcgaatcgagtctcga 33691953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 238
Target Start/End: Original strand, 32689168 - 32689305
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || |  |||||| |||| |    
T  32689168 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 32689267  T
Q  201 ctcgaactattttcgaattggttcggttcattatcagc 238  Q
     |||||||||  |||| ||||||||||||||| |||||    
T  32689268 gtcgaactataatcgagttggttcggttcattgtcagc 32689305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 28700992 - 28701076
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaa 181  Q
    ||||||||||||| |||||||| |||| |||| |||||||||| ||||| ||  ||| ||||||||||||||  ||||| |||||    
T  28700992 ataactcaagttcaactcatttttttaacgaatttaattttcagttcaacttcaacttatttggttcatgaattaaatttaacaa 28701076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 38643632 - 38643560
Alignment:
Q  156 tttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggtt 228  Q
    |||||||||||||||||||||||||||| |||| ||||||  |||| | ||||||| |||| || ||||||||    
T  38643632 tttggttcatgaaccaaattcaacaaattaattgtcgaattaagtcccaaactattgtcgagttagttcggtt 38643560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 1674678 - 1674760
Alignment:
Q  151 actcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatta 233  Q
    |||||||||||||||||||||| ||||||||   |||| | ||||||| |   |||||||| |||| ||||||||||||||||    
T  1674678 actcatttggttcatgaaccaagttcaacaagataattgttgaatcgaattctgaactattgtcgagttggttcggttcatta 1674760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 232
Target Start/End: Original strand, 28687086 - 28687202
Alignment:
Q  116 tttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcg 215  Q
    |||||||| |||||||||||||||  |||| |||  | | | ||||||||||||||| ||||||||   |||||| || ||||||  ||||| || ||||    
T  28687086 tttatttaacgaacttaattttcagctcaaatttagcccgtctggttcatgaaccaagttcaacaagcaaattattgagtcgagttccgaaccatattcg 28687185  T
Q  216 aattggttcggttcatt 232  Q
    | |||||||| ||||||    
T  28687186 atttggttcgcttcatt 28687202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 41609887 - 41610017
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || || |||||| |||| |    
T  41609887 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 41609986  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||| ||||||||||    
T  41609987 gtcgaactataatcgagttgg-tcggttcatt 41610017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 28006347 - 28006480
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  28006347 aactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcga 28006446  T
Q  199 gtctcgaactattttcgaattggttcggttcatt 232  Q
     ||||||||||||||||| |||||||||||||||    
T  28006447 atctcgaactattttcgagttggttcggttcatt 28006480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 5204609 - 5204478
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||| ||||||| |||||| | |||||||||||||||| ||    
T  5204609 tcaagttcgactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaaccaagttcaacgagtcaattatcgaatcgaatc 5204510  T
Q  202 tcgaactattttcgaattggttcggttcatta 233  Q
    || |||||||||||| |||||||| |||||||    
T  5204509 tcaaactattttcgagttggttcgattcatta 5204478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 24575906 - 24576045
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||||||||||||| | | |||||||||||| ||||||| |  |||||||||||||||||||| |||||| | |||||||||||||| |    
T  24575906 aactcaagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaa 24576005  T
Q  199 gtctcgaactattttcgaattggttcggttcattatcagc 238  Q
     ||||||||||||||||| ||||||||||||||| |||||    
T  24576006 atctcgaactattttcgagttggttcggttcattgtcagc 24576045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 50447341 - 50447477
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| ||||||||||||| | |||||||| | |||||||||||||| |||||| || ||| ||| |||||||||||||||||    
T  50447341 tcaagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattatcgaatcgagtc 50447440  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||||| |||||| |||||||| |||||    
T  50447441 tcgaactattttcgagttggtttggttcattgtcagc 50447477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 232
Target Start/End: Complemental strand, 39802916 - 39802777
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcg 192  Q
    ||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||  |||||| ||| || |  ||    
T  39802916 atacatagctcaagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccatgttcaacgaattaactgccg 39802817  T
Q  193 aatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    || ||||||||||||||||||||| |||||||| ||||||    
T  39802816 aaccgagtctcgaactattttcgagttggttcgattcatt 39802777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 232
Target Start/End: Original strand, 47983246 - 47983385
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcg 192  Q
    |||| ||||| |||||| ||||||||||||| |||  |||  ||| || ||||||| |||||||||||||| |||||||| |||||||||||||||||||    
T  47983246 atacttaacttaagttcaactcatttatttaacgagtttagattttaactcaagttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcg 47983345  T
Q  193 aatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  47983346 aatcgaatctcgaactattttcgagttggttcggttcatt 47983385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 237
Target Start/End: Original strand, 31816562 - 31816703
Alignment:
Q  96 cataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaat 195  Q
    ||||||||||||||| |||||||||||  ||| |||||||||| | | |||||  |||||||||||||||||||||| |||||| ||||||||| |||||    
T  31816562 cataactcaagttcggctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatgaaccaagttcaacgaatcaattaccgaat 31816661  T
Q  196 cgagtctcgaactattttcgaattggttcggttcattatcag 237  Q
     |||| ||||||||||||||| ||||||||||||||| ||||    
T  31816662 tgagtttcgaactattttcgagttggttcggttcattgtcag 31816703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 29677659 - 29677529
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  ||||||||||||  || |||||||||||| ||||||| |||||||||||||| |||||||| |||||| || |||||||| ||||||||     
T  29677659 tcaagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcaaatcgagta 29677560  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||||||||| |||||||||||||||    
T  29677559 tcgaactattttcgagttggttcggttcatt 29677529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 40159770 - 40159640
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||| |||||||||||| | |||  || ||||||||||||||| |     
T  40159770 tcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaaccaagtccaatgaaccaattatcgaatcgaata 40159671  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    || |||||||||||| |||||||||||||||    
T  40159670 tcaaactattttcgagttggttcggttcatt 40159640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 15257311 - 15257175
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||| ||| ||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||| | |||  || |||||||||||||||||     
T  15257311 tcaaattcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagta 15257212  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    || ||||||||| || ||||||||||||||| |||||    
T  15257211 tcaaactatttttgagttggttcggttcattgtcagc 15257175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 7956324 - 7956454
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| | | |||||||||||||||||||| |||| |||| ||||||||||||| | |||  || |||||||||||| ||||     
T  7956324 tcaagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatgaaccaagtccaatgaaccaattatcgaattgagta 7956423  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||||||||| |||||||||||||||    
T  7956424 tcgaactattttcgagttggttcggttcatt 7956454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 7995981 - 7996101
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||||||| ||| ||||||||| || | ||||| |||||||| |||| ||||||||| |||||| |||||||||||||||||| ||||||||||||    
T  7995981 ctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaacgaatcaattatcgaatcgaatctcgaactatt 7996080  T
Q  212 ttcgaattggttcggttcatt 232  Q
    ||| | |||||||||||||||    
T  7996081 ttcaagttggttcggttcatt 7996101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 229
Target Start/End: Complemental strand, 48575229 - 48575093
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcg 192  Q
    |||| |||||||||||| ||||||||||||  ||||||||||||| |||||||||| || || ||||||||||||||||| |||||| ||| ||||| ||    
T  48575229 atacttaactcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagttcaacgaattaattaccg 48575130  T
Q  193 aatcgagtctcgaactattttcgaattggttcggttc 229  Q
    ||| |||||||  ||||||||||| || |||||||||    
T  48575129 aattgagtctcatactattttcgagttagttcggttc 48575093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 38061318 - 38061188
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| ||| ||||||||| || | ||||| |||||||| ||||||| || ||| |||||| ||||||||||| |||||| ||    
T  38061318 tcaagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaatcaagttcaacgaatcaattatcaaatcgaatc 38061219  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||| ||||||||||| |||||||||||||||    
T  38061218 tcgcactattttcgagttggttcggttcatt 38061188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 44596526 - 44596647
Alignment:
Q  111 actcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactat 210  Q
    ||||||||||||| ||||||||||||||| ||||||||   |||||||||||||||||||||||||||| | | |||| |||||||||||  | ||||||    
T  44596526 actcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaactat 44596625  T
Q  211 tttcgaattggttcggttcatt 232  Q
    | |||| |||||||||||||||    
T  44596626 tgtcgagttggttcggttcatt 44596647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 31869593 - 31869724
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||| |||||||||||| |||||||||||||||  | ||||| | ||||||||||||||||||||| |||||| | | |||| ||||||| |||    
T  31869593 ctcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaaccaagttcaacgatttaattgtcgaatcaagt 31869692  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
      ||||||||| ||||||| ||||||||||||    
T  31869693 tccgaactattgtcgaattagttcggttcatt 31869724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 15306492 - 15306623
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||| ||||||||||||  |||||||||||||   |||||||   ||||||||||||||||||||| |||||  ||| ||||||||||||||||    
T  15306492 ctcaagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgaattaattatcgaatcgagt 15306591  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
      ||||||||| || | |||||||||||||||    
T  15306592 tccgaactattgtcaagttggttcggttcatt 15306623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 7016165 - 7016079
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | | ||||| ||||||||||||||| |||||    
T  7016165 ctcatttggttcatgaaccaagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttggttcggttcattgtcagc 7016079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 35810718 - 35810848
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||| |||| ||||||  |||||||||||||||  ||||||| | ||||||||||||||||||||| |||||| |||||||| ||||||||| |     
T  35810718 tcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaatt 35810817  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     |||||| |  |||| |||||||||||||||    
T  35810818 acgaactttaatcgagttggttcggttcatt 35810848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 42916254 - 42916124
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||| ||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||| ||| || |||||||||||||||||| |     
T  42916254 tcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatt 42916155  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     |||||  |  ||||||||||||||||||||    
T  42916154 acgaacactaatcgaattggttcggttcatt 42916124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 45581138 - 45581012
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| |||  |||||||||||||   |||||||  |||||||||||||||||||||| |||||| |   |||||||||||||||| ||||||||||    
T  45581138 ctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaaccaagttcaacgagataattatcgaatcgagtttcgaactatt 45581039  T
Q  212 ttcgaattggttcggttcattatcagc 238  Q
    ||| | ||||||||||||||| |||||    
T  45581038 ttcaagttggttcggttcattgtcagc 45581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 6413272 - 6413369
Alignment:
Q  135 tttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||| ||||||| || |||||||||||||||||||  |||||| ||||||||||| |||||| ||||||||||||||||| |||||||| ||||||    
T  6413272 tttcaactcaagttcgattcatttggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcatt 6413369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 7841674 - 7841752
Alignment:
Q  153 tcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  7841674 tcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcatt 7841752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 46265084 - 46264954
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||| ||| |||||||||||||||||||  ||||||| | ||||||| ||||||||||||| ||| || |||||||||||||||||| |     
T  46265084 tcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttagttcatgaaccaagttcgacgaatcaattatcgaatcgaatt 46264985  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     |||||  |  ||||||||||||||||||||    
T  46264984 acgaacactaatcgaattggttcggttcatt 46264954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 7596393 - 7596523
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||| ||| |||||||||||||||||||  ||||||| | |||||||||||||| |||||| ||| || |||||||||||||||| | |     
T  7596393 tcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcataaaccaagttcgacgaatcaattatcgaatcaaatt 7596492  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     |||||| |  |||| |||||||||||||||    
T  7596493 acgaactctaatcgagttggttcggttcatt 7596523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 15014339 - 15014445
Alignment:
Q  126 gaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcg 225  Q
    ||||||||||||||| ||||||| | ||||||||||||||||| ||| ||| || |||||||||||||||||| |  |||||| |  |||| ||||||||    
T  15014339 gaacttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactctaatcgagttggttcg 15014438  T
Q  226 gttcatt 232  Q
    |||||||    
T  15014439 gttcatt 15014445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 14578702 - 14578589
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    |||||||||||||||  || |||| | ||||||||||||||||||||| ||||||||||||||| || |||||| |  |||||| |  |||| |||||||    
T  14578702 cgaacttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggttc 14578603  T
Q  225 ggttcattatcagc 238  Q
    |||||||| |||||    
T  14578602 ggttcattgtcagc 14578589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 23915740 - 23915607
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||| |||||||||||||  ||||||||||||||  | |||||   ||||||||||||||||||||| |||||| |   |||| | |||||||    
T  23915740 aactcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaacgagataattgttgaatcga 23915641  T
Q  199 gtctcgaactattttcgaattggttcggttcatt 232  Q
    || ||||||| || |||| |||||||| ||||||    
T  23915640 gtttcgaacttttgtcgagttggttcgattcatt 23915607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 27076655 - 27076519
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| |||| |||||||| ||||||||| ||| |  ||||||| | ||||||| ||||||| ||||| |||||| ||| |||||||||||| ||||    
T  27076655 tcaagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaattatcgaatcaagtc 27076556  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    |  |||||||||| | |||||||  |||||| |||||    
T  27076555 ttaaactattttcaagttggttcaattcattgtcagc 27076519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 25125002 - 25124895
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    |||| ||||||||||  ||||||| | ||||||||||||||||||||| |||||| ||||||||||| |||||| |  |||||| |  |||| |||||||    
T  25125002 cgaaattaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattatcaaatcgaattacgaactttaatcgagttggttc 25124903  T
Q  225 ggttcatt 232  Q
    ||||||||    
T  25124902 ggttcatt 25124895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 43087611 - 43087508
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||||| ||||||||| ||| |||||||||| || | |||||||| | ||| ||||||||||||||||| |||||||||  ||||| ||| ||    
T  43087611 ataactcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaagttcaacaaactaattaccgagtc 43087512  T
Q  197 gagt 200  Q
    ||||    
T  43087511 gagt 43087508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 12224684 - 12224579
Alignment:
Q  133 attttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||  ||||||| | ||||||||||||||||||||| |||||| | | |||| ||||||||| |  ||||||||| |||| |||||||||||||||    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcatt 12224585  T
Q  233 atcagc 238  Q
     |||||    
T  12224584 gtcagc 12224579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 21680773 - 21680666
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    ||||||||||||| |  ||||||| | |||||||  ||||| |||||| |||||| |   |||||||||||||||| |||||||||||||||  ||||||    
T  21680773 cgaacttaatttttagctcaagttcggctcatttcattcataaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcgagctggttc 21680674  T
Q  225 ggttcatt 232  Q
    ||||||||    
T  21680673 ggttcatt 21680666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 45653548 - 45653442
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    ||||||||| ||| |  ||||||| | ||||||||||||||||||||| |||||| ||  |||| ||||||||||| | ||||||||||||| |||| ||    
T  45653548 cgaacttaacttttagctcaagttcggctcatttggttcatgaaccaagttcaacgaaataattgtcgaatcgagttttgaactattttcgagttgg-tc 45653450  T
Q  225 ggttcatt 232  Q
    ||||||||    
T  45653449 ggttcatt 45653442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 232
Target Start/End: Original strand, 30251437 - 30251555
Alignment:
Q  115 atttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactat-ttt 213  Q
    ||||| ||| ||||||||||||| |  |||||||  | |||||| |||||||||||||| ||||| | | |||||||||||| ||| | ||||||| |||    
T  30251437 atttagttaacgaacttaatttttagctcaagttcaattcatttagttcatgaaccaaactcaacgagttaattatcgaatcaagttttgaactatgttt 30251536  T
Q  214 cgaattggttcggttcatt 232  Q
    |||||||||| ||||||||    
T  30251537 cgaattggtttggttcatt 30251555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 238
Target Start/End: Complemental strand, 47603003 - 47602866
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || || |||||| |||| |    
T  47603003 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 47602904  T
Q  201 ctcgaactattttcgaattggttcggttcattatcagc 238  Q
     |||||||||  |||| ||||||||||||||| |||||    
T  47602903 gtcgaactataatcgagttggttcggttcattgtcagc 47602866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 19508523 - 19508658
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    |||||||||| || ||||||||| ||| |||||||||| || |  ||||||| | ||| ||||||||||||||||| |||||| ||  ||||| ||| ||    
T  19508523 ataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtc 19508622  T
Q  197 gagtctcgaactattttcgaattggttcggttcatt 232  Q
    ||||  |||||| | ||||| |||  ||||||||||    
T  19508623 gagttccgaactttattcgagttgtatcggttcatt 19508658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 24469958 - 24469827
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || || |||||| |||| |    
T  24469958 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 24469859  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  24469858 gtcgaactataatcgagttggttcggttcatt 24469827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 32179857 - 32179988
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    |||||| |||| ||||||||| ||||||  || || |||||| |||| |    
T  32179857 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaacggattaaatatcgagtcgaat 32179956  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  32179957 gtcgaactataatcgagttggttcggttcatt 32179988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 572502 - 572420
Alignment:
Q  156 tttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |||||||  |||||||| |||||||||||||||||||| |||||||||||||| | ||||| || | ||| |||||| |||||    
T  572502 tttggtttttgaaccaagttcaacaaatcaattatcgagtcgagtctcgaactttgttcgagtttgctcgattcattgtcagc 572420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 14796590 - 14796679
Alignment:
Q  104 aagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcga 193  Q
    |||||| ||||||||||||| ||||||||||||  | ||||||||  ||| | |||||||||||||||  |||||| ||| |||||||||    
T  14796590 aagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcga 14796679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 14805464 - 14805553
Alignment:
Q  104 aagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcga 193  Q
    |||||| ||||||||||||| ||||||||||||  | ||||||||  ||| | |||||||||||||||  |||||| ||| |||||||||    
T  14805464 aagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcga 14805553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 23916833 - 23916946
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    |||||||||||||||  ||||||| | ||||||||||| ||||||||| ||  |  |||||||||||||||||| |  |||||| |  |||| ||||||     
T  23916833 cgaacttaattttcagctcaagttaggctcatttggttaatgaaccaagtttgatgaatcaattatcgaatcgaattacgaactttaatcgagttggttt 23916932  T
Q  225 ggttcattatcagc 238  Q
    |||||||| |||||    
T  23916933 ggttcattgtcagc 23916946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 20347676 - 20347796
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| |||||||||||||||  | ||||| | |||||||||| |||||| |||||||||| ||| |||| |||| || | | |  ||||||     
T  20347676 ctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaactata 20347775  T
Q  212 ttcgaattggttcggttcatt 232  Q
    ||||| ||| |||||||||||    
T  20347776 ttcgagttgattcggttcatt 20347796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 20349156 - 20349276
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| |||||||||||||||  | ||||| | ||||||||||  ||||| ||| |||||| ||| ||||||||| || | | |  ||||||     
T  20349156 ctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcgagtcaaattttaaactatg 20349255  T
Q  212 ttcgaattggttcggttcatt 232  Q
    ||||| |||||||||||||||    
T  20349256 ttcgagttggttcggttcatt 20349276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 36419100 - 36419231
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| ||||||||||||||   ||||||    |||||| |||||||||||||| ||| ||  || || |||||| |||| |    
T  36419100 ctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcgacggattaaatatcgagtcgaat 36419199  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  36419200 gtcgaactataatcgagttggttcggttcatt 36419231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 232
Target Start/End: Original strand, 42937065 - 42937204
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcg 192  Q
    ||||||| |||||||||  |||| ||| ||  ||||||||||||| |  ||||||| | |||||||| |||||||||||| ||| || |||||||| | |    
T  42937065 atacatagctcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcatgaaccaagttcgacgaatcaattgttg 42937164  T
Q  193 aatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||| |  |||||| |  |||| ||||||| |||||||    
T  42937165 aatcgaattacgaactctaatcgagttggttcagttcatt 42937204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 238
Target Start/End: Original strand, 3577669 - 3577807
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgact-catttggttcatgaaccaaattcaacaaatcaattatcgaatcgag 199  Q
    |||||||||  |||||||||||| |||| | | ||||||  |||||||| | | |||||| |||||||||||| |||||| | | || | ||||||||||    
T  3577669 ctcaagttcagctcatttatttaacgaattaatttttcagctcaagttttaattcatttgattcatgaaccaagttcaacgagttaactgtcgaatcgag 3577768  T
Q  200 tctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |  | ||||||| |||| || |||||||||||| |||||    
T  3577769 ttccaaactattgtcgagttagttcggttcattgtcagc 3577807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 195
Target Start/End: Original strand, 15662972 - 15663042
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaat 195  Q
    |||||||||||||||  ||||||| | |||||||||| |||||||||| ||| || |||||||||| ||||    
T  15662972 cgaacttaattttcagctcaagttcggctcatttggtacatgaaccaagttcgacgaatcaattattgaat 15663042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 7702845 - 7702965
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| |||||||||||||||  ||||||    ||| || | |||||||||||| ||||||  || || |||||| |||| | |||||||||     
T  7702845 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttagcttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 7702944  T
Q  212 ttcgaattggttcggttcatt 232  Q
     |||| |||||||||||||||    
T  7702945 atcgagttggttcggttcatt 7702965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 236
Target Start/End: Complemental strand, 29113673 - 29113531
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcg 192  Q
    ||||||| |||||||||  ||| ||||||  || ||||||||||||| ||||| ||   |  |||||||||||||||||| |||||| ||||||||  |     
T  29113673 atacatagctcaagttcacctcttttattg-gcaaacttaattttcagttcaaattcagcctatttggttcatgaaccaagttcaacgaatcaattgcca 29113575  T
Q  193 aatcgagtctcgaactattttcgaattggttcggttcattatca 236  Q
    ||| |||| | ||||| | || || |||||| ||||||||||||    
T  29113574 aattgagttttgaactttatttgagttggtttggttcattatca 29113531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 40002893 - 40002960
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaa 168  Q
    ||||||||| ||||| ||| ||  |||||||||||||||| ||||||| | |||||||| ||||||||    
T  40002893 ctcaagttcaactcaattagttgacgaacttaattttcaactcaagttcggctcatttgattcatgaa 40002960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 11991283 - 11991348
Alignment:
Q  113 tcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaa 178  Q
    ||||||| ||| ||||| |||||||||||| |||||   || ||||||||||||||||| ||||||    
T  11991283 tcatttagttaacgaacataattttcaatttaagttcatcttatttggttcatgaaccatattcaa 11991348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 36119122 - 36119207
Alignment:
Q  153 tcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||| |||||| ||| || |   |||| ||||||||| | ||||||||||||  | ||||||||||||||| |||||    
T  36119122 tcatttggttcataaaccaagttcgacgagaaaattgtcgaatcgaatttcgaactattttttagttggttcggttcattgtcagc 36119207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 88 - 238
Target Start/End: Original strand, 27196063 - 27196213
Alignment:
Q  88 gaatgatacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaat 187  Q
    |||| |||| || ||||||||| |||| ||||| || ||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||    
T  27196063 gaatcatacttagctcaagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacgaatcaat 27196162  T
Q  188 tatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  27196163 tatcgaatcgagtctcgaactattttcgagttggttcggttcattgtcagc 27196213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 27450721 - 27450591
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| ||| ||||||||| || ||||||| |||||||| |||||||||| |||||||||| |||||||||||||||||| ||    
T  27450721 tcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaaattcaacgaatcaattatcgaatcgaatc 27450622  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||| ||||||||||| |||||||||||||||    
T  27450621 tcgcactattttcgagttggttcggttcatt 27450591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 96 - 238
Target Start/End: Complemental strand, 32945167 - 32945025
Alignment:
Q  96 cataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaat 195  Q
    |||||||| |||||| |||||||||||  ||| |||||||||  | ||||||| ||||||||||||||||||||||| || ||| ||||||||| |||||    
T  32945167 cataactccagttcggctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatgaaccaagtttaacgaatcaattaccgaat 32945068  T
Q  196 cgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||    
T  32945067 cgagtttcgaactattttcgagttggttcggttcattgtcagc 32945025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 39407406 - 39407542
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| ||| ||||||||| || ||||||| |||||||| |||||||||| ||| |||||| |||||||||||||||||| ||    
T  39407406 tcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 39407505  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||| |||||||| || |||||||||||||||| ||||    
T  39407506 tcgcactatttttgagttggttcggttcattaccagc 39407542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 26299847 - 26299977
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| | ||||||||||| ||| ||||||||| || |||||||||||||||| ||||||||||  || |||||| |||||||||||||||||| ||    
T  26299847 tcaagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatgaagttcaacgaatcaattatcgaatcgaatc 26299946  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||| ||||||||||| |||||||||||||||    
T  26299947 tcgcactattttcgagttggttcggttcatt 26299977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 104 - 232
Target Start/End: Original strand, 26298313 - 26298441
Alignment:
Q  104 aagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctc 203  Q
    |||||| ||||||||||||| ||| ||||||||| || |||||||||||||||| |||||||||| ||| |||||| |||||||||||||||||| ||||    
T  26298313 aagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctc 26298412  T
Q  204 gaactattttcgaattggttcggttcatt 232  Q
      |||||||| || |||||||||||||||    
T  26298413 acactatttttgagttggttcggttcatt 26298441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 34719797 - 34719667
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| ||| ||||||||| || ||||||| ||||||||  ||||||||| ||| |||||| |||||||||||||||| | ||    
T  34719797 tcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaatcaagttcaacgaatcaattatcgaatcaaatc 34719698  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||| ||||||||||| |||||||| ||||||    
T  34719697 tcgcactattttcgagttggttcgtttcatt 34719667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 34724891 - 34724764
Alignment:
Q  105 agttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcg 204  Q
    ||||| ||||||||||||| ||| ||||||||| || ||||||| |||||||| |||||||||| ||| |||||| ||||||||||| |||||| ||||     
T  34724891 agttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctca 34724792  T
Q  205 aactattttcgaattggttcggttcatt 232  Q
     ||||||||| | |||||||||||||||    
T  34724791 cactattttcaagttggttcggttcatt 34724764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 10493985 - 10494115
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||||||||||| ||| |||||||||||| ||||||| |||||||||||||  |||||||| |||||| || ||||||| ||||||| |     
T  10493985 tcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaaccaagttcaacgaaccaattattgaatcgaata 10494084  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    || ||||||||| || |||||||||||||||    
T  10494085 tcaaactatttttgagttggttcggttcatt 10494115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 10327921 - 10328066
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcg 192  Q
    ||||||| ||||||||  | ||||||||||  |||  ||||| ||| | |||||||||| |||||||||||||||| ||| |||||| ||||||||| ||    
T  10327921 atacatagctcaagtttaattcatttatttgtcgagtttaatattcgactcaagtttgattcatttggttcatgaatcaagttcaacgaatcaattaccg 10328020  T
Q  193 aatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |||||||| | |||| |||||||| ||||||||||||||| |||||    
T  10328021 aatcgagttttgaacaattttcgagttggttcggttcattgtcagc 10328066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 3801504 - 3801374
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||| ||| |||||||||||||||  ||||||| | ||||||||||||||||||||| |||||  || ||||| |||| |||| |     
T  3801504 tcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaatt 3801405  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     |||||||| ||||| |||||||||||||||    
T  3801404 acgaactatattcgagttggttcggttcatt 3801374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 34857356 - 34857477
Alignment:
Q  111 actcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactat 210  Q
    ||||||||||||| ||| ||||||||| || ||||||| |||||||| | |||||||| ||| |||||| |||||||||| |||| || ||||  |||||    
T  34857356 actcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaatcaagttcaacgaatcaattattgaattgaatctcacactat 34857455  T
Q  211 tttcgaattggttcggttcatt 232  Q
    |||||| |||||||||||||||    
T  34857456 tttcgagttggttcggttcatt 34857477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 19716183 - 19716308
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| | ||||||||||| ||| ||||||||| || | ||||| |||||||| |||||||||| ||| |||||| ||||||||||||||     ||    
T  19716183 tcaagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaa-----tc 19716277  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||| ||||||||||| |||||||||||||||    
T  19716278 tcgcactattttcgagttggttcggttcatt 19716308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 38523001 - 38522871
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||||||| ||| |||||||||||||||  ||||||||| ||||||||||||||||||||| |||||   | |||||||||| || | |     
T  38523001 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatggaccaattatcgagtcaaatt 38522902  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     |||||||| ||||| |||||||||||||||    
T  38522901 acgaactatattcgagttggttcggttcatt 38522871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 1840828 - 1840697
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||||||  |||||||||||||||  |||||||   ||||||||||||||||||||| |||||| | | |||| |||||| ||||    
T  1840828 ctcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattgagt 1840729  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
       |||||||| |||| |||||||||||||||    
T  1840728 tctgaactattgtcgagttggttcggttcatt 1840697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 238
Target Start/End: Original strand, 24536016 - 24536143
Alignment:
Q  111 actcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactat 210  Q
    |||| |||||||| ||||||||||||| |  |||| |||  |||||||| ||||||||||| ||||||||||| ||||||| |||  ||||| |||||||    
T  24536016 actcgtttatttaacgaacttaattttgagctcaaatttagctcatttgattcatgaaccagattcaacaaattaattatcaaattaagtcttgaactat 24536115  T
Q  211 tttcgaattggttcggttcattatcagc 238  Q
    |||| | ||||||| ||||||| |||||    
T  24536116 tttcaagttggttcagttcattttcagc 24536143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 232
Target Start/End: Original strand, 36523742 - 36523885
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaa----cttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaatt 188  Q
    ||||||| |||||||||  |||||||||||| | ||    ||||||||| || ||||||| ||||||||||||||||||||||| |||||  |||| |||    
T  36523742 atacatagctcaagttcagctcatttatttaacaaattaacttaatttttaaatcaagttcgactcatttggttcatgaaccaagttcaatgaatctatt 36523841  T
Q  189 atcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||| ||||||| ||| | ||||| ||  |||||||||||    
T  36523842 atcgaatcaagtctcggactttattcgagttaattcggttcatt 36523885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 238
Target Start/End: Original strand, 39414176 - 39414318
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaa-ttcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaat 195  Q
    |||||||||||||  |||||||||||| ||||||||||||| || || |||||   |||||| |||||||| ||||| |||||| | | |||| ||||||    
T  39414176 ataactcaagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcattaggttcatggaccaagttcaacgagttaattgtcgaat 39414275  T
Q  196 cgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
      ||| |||||||||| |||| ||||||||||||||| |||||    
T  39414276 taagtttcgaactattgtcgagttggttcggttcattttcagc 39414318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 238
Target Start/End: Original strand, 41783320 - 41783461
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||||| ||||||||| ||| |||||||||| || |  ||||||| | ||||||||||||||||||||| |||||| ||  ||||| ||| ||    
T  41783320 ataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaagttcaacgaactaattaccgagtc 41783419  T
Q  197 gagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||  |||||| | ||||| |||  |||||||||| |||||    
T  41783420 gagttccgaactttattcgagttgtatcggttcattgtcagc 41783461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 1225351 - 1225447
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||||  ||||||||||  ||| |||||||||||| ||||||| |||||||||||||||| ||| || |||||| || |||||||||||||||    
T  1225351 tcaagttcggttcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcataaactaagttcaacgaaacaattatcgaatcga 1225447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 28431104 - 28431184
Alignment:
Q  151 actcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcat 231  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||| || ||||||||||| ||| |||||| |||||||    
T  28431104 actcatttagttcatgaaccaagttcaacaattcaattatcgaatcgtgtatcgaactatttacgagttggtttggttcat 28431184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 40056493 - 40056369
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||||||| |||||||||||||||  |||| ||| ||| ||||||||||||||||||||||||| |   |||| ||||||||| | || |||||||    
T  40056493 ctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgagataattgtcgaatcgaatttcaaactatt 40056394  T
Q  212 ttcgaattggttcggttcattatca 236  Q
     |||| ||||||   ||||||||||    
T  40056393 atcgagttggtttaattcattatca 40056369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 5382936 - 5382829
Alignment:
Q  131 taattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttca 230  Q
    ||||||| || ||| ||| ||||| ||||||||||||| ||| |||||| ||| ||||| |||||||||||||||||| ||||| | ||||||| |||||    
T  5382936 taattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattaccgaatcgagtctcgaactcttttcaagttggttcagttca 5382837  T
Q  231 ttatcagc 238  Q
    || |||||    
T  5382836 ttgtcagc 5382829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 20188996 - 20189109
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    ||||||||||||| | |||||||| | ||||||||||||||||||||| ||| || |||||||||||||||| | |  |||||| |  |||| ||| |||    
T  20188996 cgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcaaattacgaactctaatcgagttgattc 20189095  T
Q  225 ggttcattatcagc 238  Q
    |||||||| |||||    
T  20189096 ggttcattgtcagc 20189109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 28247473 - 28247546
Alignment:
Q  165 tgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |||||||| |||||| ||||||||||| |||| | | ||||||||||||||||||||||||||||||| |||||    
T  28247473 tgaaccaagttcaacgaatcaattatcaaatcaaatatcgaactattttcgaattggttcggttcattgtcagc 28247546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 31021913 - 31021998
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcag 237  Q
    |||||||||||||||||||||| ||||| | | ||||||||| ||||||  |||||||| ||||| ||||||||||||||| ||||    
T  31021913 ctcatttggttcatgaaccaaactcaacgagttaattatcgagtcgagttccgaactatattcgagttggttcggttcattgtcag 31021998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 39409140 - 39409262
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| ||| ||||||||| || ||||||| |||||||| ||||||||||              |||||||||||||||| ||    
T  39409140 tcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa--------------tcaattatcgaatcgaatc 39409225  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||| ||||||||||| |||||||||||||||| ||||    
T  39409226 tcgcactattttcgagttggttcggttcattaccagc 39409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 2676039 - 2676147
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||| | ||| || |||||||| ||| ||||| |  |||||| |  |||||||||||     
T  2676039 cgaacttaattttcagctcaagttcgactcatttggttcatgaacctagttcgacgaatcaattgtcggatcgaattacgaactttaatcgaattggttt 2676138  T
Q  225 ggttcatta 233  Q
    |||||||||    
T  2676139 ggttcatta 2676147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 238
Target Start/End: Original strand, 31620864 - 31621004
Alignment:
Q  98 taactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcg 197  Q
    ||||||||||||  |||||||| ||| |||||||||| ||||  | |||||  ||||||| ||||||||||||||||||||   |  |||| |||| |||    
T  31620864 taactcaagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcattaggttcatgaaccaaattcaatggactaattgtcgagtcg 31620963  T
Q  198 agtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    | | ||||||||| ||| | ||||||||||||||| |||||    
T  31620964 aatttcgaactatattcaagttggttcggttcattgtcagc 31621004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 34723793 - 34723705
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattat 190  Q
    |||||||| ||||||||||||| ||| ||||||||| || |||| || |||||||| |||||||||| ||| |||||| ||||||||||    
T  34723793 tcaagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcatgaatcaagttcaacgaatcaattat 34723705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 232
Target Start/End: Complemental strand, 14500851 - 14500716
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||||| ||||||| | ||| |||||||||| || |  ||||||| | ||| ||||||||||||||||| |||||| ||  ||||||||| ||    
T  14500851 ataactcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattatcgagtc 14500752  T
Q  197 gagtctcgaactattttcgaattggttcggttcatt 232  Q
    ||||  |||||| | ||||| |||  ||||||||||    
T  14500751 gagttccgaactgtattcgagttgtatcggttcatt 14500716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 231
Target Start/End: Original strand, 1091123 - 1091252
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| |||||||||||||  ||||||| |||| || ||||||| ||| ||||| |||  ||||| || |||||| |||  |||||||||||||||    
T  1091123 ctcaagttcaactcatttatttaatgaacttattttt-aactcaagttcgacccatttagtttgtgaactaagttcaacgaattcattatcgaatcgagt 1091221  T
Q  201 ctcgaactattttcgaattggttcggttcat 231  Q
    || ||||| ||||  | ||||||||||||||    
T  1091222 cttgaactttttttaagttggttcggttcat 1091252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 17168533 - 17168447
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |||||||||||  |||||||| |||||||||| || ||||||||| |||||| |||||||||||| ||  ||||||||||| |||||    
T  17168533 ctcatttggtttgtgaaccaagttcaacaaattaaatatcgaatctagtctcaaactattttcgagttacttcggttcattgtcagc 17168447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 230
Target Start/End: Complemental strand, 30661043 - 30660919
Alignment:
Q  106 gttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcga 205  Q
    ||||||||||| || ||| | |||||||||||||| | || ||   ||||||| |||||||||| || ||||| ||||||||||||||||||||| |  |    
T  30661043 gttcgactcatataattaacaaacttaattttcaacttaaattcagctcatttagttcatgaactaagttcaataaatcaattatcgaatcgagttttaa 30660944  T
Q  206 actattttcgaattggttcggttca 230  Q
    ||||  ||||| |||||||| ||||    
T  30660943 actaaattcgagttggttcgattca 30660919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 20190703 - 20190628
Alignment:
Q  123 agcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||| |  ||||||| | ||||||||||||||||||||| ||| |  ||||||||||||||||||    
T  20190703 agcgaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcgatgaatcaattatcgaatcga 20190628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 3457825 - 3457956
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaatt----caagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||| | ||||||||||||| ||||||||||||| | ||    |||||| || |||||||||||| ||| | | |||||| ||  ||||| | ||||    
T  3457825 ctcaagtccaactcatttatttaacgaacttaatttttatttaactcaagttcgattcatttggttcaagaatcgagttcaacgaactaattaccaaatc 3457924  T
Q  197 gagtctcgaactattttcgaattggttcggtt 228  Q
    || |||| |||||||||||| |||||||||||    
T  3457925 gaatctcaaactattttcgagttggttcggtt 3457956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 15933159 - 15933293
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaatt---ttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcg 197  Q
    |||||||||| |||||||||||| ||||||||||    || |  ||| |||  ||||||| |||||||||||||| |||||| ||| || | |||| |||    
T  15933159 ctcaagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaactcattaggttcatgaaccaagttcaacgaattaactgtcgagtcg 15933258  T
Q  198 agtctcgaactattttcgaattggttcggttcatt 232  Q
    | | |||||||||  |||| |||||||||||||||    
T  15933259 aatttcgaactatactcgagttggttcggttcatt 15933293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 19282254 - 19282119
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  ||||| || ||| ||||| |||||||||  |||||||   ||||||||||||||||||||| |||||| | | |||| ||||||  |||     
T  19282254 tcaagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaatgaagtt 19282155  T
Q  202 tcgaactattttcgaattggttcggttcattatcag 237  Q
     ||||||||| |||| ||||||| | ||||| ||||    
T  19282154 ccgaactattatcgagttggttcagctcattgtcag 19282119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 26218042 - 26218145
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||||  ||||||||| ||| |||||||||| || |  ||||||| | ||| ||||||||||||||||| |||||| ||  ||||| ||| ||    
T  26218042 ataactcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtc 26218141  T
Q  197 gagt 200  Q
    ||||    
T  26218142 gagt 26218145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 27906097 - 27906228
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || |  |||||| |||| |    
T  27906097 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 27906196  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  27906197 gtcgaactataatcgagttggttcggttcatt 27906228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 28246732 - 28246798
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaa 168  Q
    |||||||| |||||||||||||  ||  ||||||||||| ||||||| |||||||||||||| ||||    
T  28246732 tcaagttcaactcatttatttaatgagtttaattttcaactcaagttcgactcatttggttcgtgaa 28246798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 11136151 - 11136049
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||||| ||||||||| ||| |||||||||| || |  ||||||| | ||| |||||||| |||||||| |||||| ||  ||||| ||| ||    
T  11136151 ataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagttcaacgaactaattaccgagtc 11136053  T
Q  197 gagt 200  Q
    ||||    
T  11136052 gagt 11136049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 32157077 - 32157023
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcat 156  Q
    ||||||||  |||||||| ||| |||||||||||||||| ||||||||| |||||    
T  32157077 tcaagttcagctcatttaattaacgaacttaattttcaactcaagtttggctcat 32157023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 33326469 - 33326558
Alignment:
Q  111 actcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||||||| |   ||||| |||||||| | |||||||||||||  || || || |||||||||  |||||||||| |||||||||    
T  33326469 actcatttatttaacatgcttaactttcaatttatgtttgactcatttaatttataaatcaaattcaatgaatcaattattgaatcgagt 33326558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 5e-46; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 12673171 - 12673038
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||||||||||||||||||||  || |||||||||||| ||||||| ||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  12673171 aactcaagttcgactcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcga 12673072  T
Q  199 gtctcgaactattttcgaattggttcggttcatt 232  Q
     ||||||||||||||||| |||||||||||||||    
T  12673071 atctcgaactattttcgagttggttcggttcatt 12673038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 96 - 238
Target Start/End: Complemental strand, 49405781 - 49405639
Alignment:
Q  96 cataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaat 195  Q
    ||||||||||||||| |||||||||||  ||| |||||||||| ||||||||| |||||||||||||||| |||||| |||||| ||||||||| |||||    
T  49405781 cataactcaagttcggctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataaaccaagttcaacgaatcaattaccgaat 49405682  T
Q  196 cgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||| ||||||||||||||  ||||||||||||||| |||||    
T  49405681 cgagtttcgaactattttcgggttggttcggttcattgtcagc 49405639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 99 - 238
Target Start/End: Complemental strand, 46944687 - 46944548
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||| ||||||||| ||| ||||| |||||| ||||||| ||||||||||||||||||||||| |||||| |  |||||||||||||||    
T  46944687 aactcaagttcgacttatttatttaacgagcttaaatttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagccaattatcgaatcga 46944588  T
Q  199 gtctcgaactattttcgaattggttcggttcattatcagc 238  Q
     |||||||||||||| || ||||||||||||||| |||||    
T  46944587 atctcgaactatttttgagttggttcggttcattgtcagc 46944548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 40797830 - 40797960
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||| |||||  || ||||||||||||| |||     
T  40797830 tcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaatgaaccaattatcgaatcaagta 40797929  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    |||||||||||| || |||||||||||||||    
T  40797930 tcgaactatttttgagttggttcggttcatt 40797960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 51995078 - 51995208
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| |||| |||||||| | ||||||||||| |  ||||||| | ||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  51995078 tcaagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtc 51995177  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||||||||| |||||||||||||||    
T  51995178 tcgaactattttcgagttggttcggttcatt 51995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 101 - 238
Target Start/End: Complemental strand, 24008044 - 24007907
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| ||||||||||||| ||||||||||||| || |||||||| |||| || |||||||||||||| |||||| ||||||| ||| |||||| |    
T  24008044 ctcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaaccaagttcaacgaatcaatcatcaaatcgaat 24007945  T
Q  201 ctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |||||||||||||||| |||||||  |||||| |||||    
T  24007944 ctcgaactattttcgagttggttcaattcattgtcagc 24007907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 80497 - 80627
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||| |||||||||||  ||| |||||||||||| ||||||| ||||||||||||||||||||||| |||||| || |||||| |||||| | |     
T  80497 tcaagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcaaatt 80596  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||||||||| |||| ||||||||||    
T  80597 tcgaactattttcgagttggatcggttcatt 80627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 39736669 - 39736797
Alignment:
Q  88 gaatgatacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaat 187  Q
    |||| ||||||| ||||| ||  |||| |||||||| | ||||||||||| |||||||||| |||| ||||||| | ||||||||||||||| |||||||    
T  39736669 gaatcatacatagctcaaatttaactcgtttatttaacaaacttaatttttaattcaagttcgacttatttggtccgtgaaccaaattcaacgaatcaat 39736768  T
Q  188 tatcgaatcgagtctcgaactattttcga 216  Q
    |||||||||||||||| ||||||||||||    
T  39736769 tatcgaatcgagtctcaaactattttcga 39736797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 51408089 - 51407953
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| |||||||| |||  ||||||||||||| ||  || ||| ||||||||||||||||||||||| || ||| ||| ||||| |||||||||||    
T  51408089 tcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacgaattaattaccgaatcgagtc 51407990  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||||| ||||||| ||||||| |||||    
T  51407989 tcgaactattttcgagttggttcagttcattgtcagc 51407953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 34980635 - 34980516
Alignment:
Q  111 actcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactat 210  Q
    |||||||||||||||||  ||||||||||| ||||||| || ||||||| |||||||| ||| |||||  ||||||||||||||||||||||| ||||||    
T  34980635 actcatttatttagcgagtttaattttcaactcaagttcgattcatttgattcatgaatcaagttcaatgaatcaattatcgaatcgagtctcaaactat 34980536  T
Q  211 tttcgaattggttcggttca 230  Q
    |||||| |||||| ||||||    
T  34980535 tttcgagttggtttggttca 34980516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 238
Target Start/End: Complemental strand, 48802622 - 48802479
Alignment:
Q  96 cataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattc-aacaaatcaattatcgaa 194  Q
    |||| |||||||||| |||||||||||  ||| |||||||||| | ||||||| ||||||||||||||||||| ||| ||| || |||||||| | | ||    
T  48802622 catagctcaagttcggctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatgaatcaagttcaaaaaaatcaataaccaaa 48802523  T
Q  195 tcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||    
T  48802522 tcgagtttcgaactattttcgagttggttcggttcattgtcagc 48802479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 238
Target Start/End: Complemental strand, 11055367 - 11055230
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||| |||||||||||| ||||||||||||||   |||||||   ||||||||||||||||||||| |||||  | | ||||||||||||||||    
T  11055367 ctcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagt 11055268  T
Q  201 ctcgaactattttcgaattggttcggttcattatcagc 238  Q
      ||||||||| |||| ||||||||||||||| |||||    
T  11055267 tccgaactattgtcgagttggttcggttcattgtcagc 11055230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 238
Target Start/End: Complemental strand, 55892126 - 55891989
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| |||||||| |||  ||||||||||||| ||  || ||| ||||| ||||||||||||||||| |||||| ||| ||||| ||||||||||    
T  55892126 ctcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagt 55892027  T
Q  201 ctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||| || ||||||| ||||||| |||||    
T  55892026 ctcgaactatttttgagttggttcagttcattgtcagc 55891989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 9222270 - 9222142
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| | ||||||||||| ||| |||||||| ||| ||||||| ||||||||||||   |||||||| |||||| || ||||| |||||||||||     
T  9222270 tcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcgagta 9222173  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||||||||| |||||||||||||||    
T  9222172 tcgaactattttcgagttggttcggttcatt 9222142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 13455701 - 13455837
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| |||| |||||||| ||||||||||||| |  ||||||| |||||||||||||||| || ||| |||||| ||| |||||||||||||| ||    
T  13455701 tcaagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaatcgaatc 13455800  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    || || ||||||| | ||||||||||| ||| |||||    
T  13455801 tcaaattattttcaagttggttcggtttattgtcagc 13455837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 26632936 - 26633066
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||| |||||||||||| |||||||||||||||  |||||||   ||||||||||| |||| |||| |||||| | | |||| |||||||||||     
T  26632936 tcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgagttaattgtcgaatcgagtt 26633035  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     ||||||||| |||| |||||||||||||||    
T  26633036 acgaactattatcgagttggttcggttcatt 26633066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 225
Target Start/End: Complemental strand, 48151269 - 48151143
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||| ||||||||| |||||||||||||||  |||||||   |||||||||||  |||||||| ||||||||   |||| |||||||||    
T  48151269 aactcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagttcaacaagataattgtcgaatcga 48151170  T
Q  199 gtctcgaactattttcgaattggttcg 225  Q
    || |||||||||| |||| ||||||||    
T  48151169 gtttcgaactattgtcgagttggttcg 48151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 238
Target Start/End: Complemental strand, 19455299 - 19455162
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| |||||||||  || | |||||||||||||| |||||||   |||||||| |||||||||||| |||||| ||| |||| || ||||||||    
T  19455299 ctcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaagttcaacgaattaattgtcaaatcgagt 19455200  T
Q  201 ctcgaactattttcgaattggttcggttcattatcagc 238  Q
     |||||||||||||||||  | |||||||||| |||||    
T  19455199 ttcgaactattttcgaataagctcggttcattgtcagc 19455162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 25134574 - 25134663
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatc 191  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| ||| ||||||||    
T  25134574 tcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaataaaccaattatc 25134663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 28265811 - 28265683
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| |||||||| |||  ||||||||||||| || |||  ||   ||| ||||||||||||||||| |||||| ||| ||||| ||||||||||    
T  28265811 ctcaagttcaactcatttgtttgacgaacttaattttaaactcagatt---ctcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagt 28265715  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||||||||||| ||||||| |||||||    
T  28265714 ctcgaactattttcgagttggttcagttcatt 28265683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 1803498 - 1803629
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| ||| ||||||||| || ||||||| |||||||| |||||||||| ||| || ||| ||||||||||||||     ||    
T  1803498 tcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagtttaacgaatcaattatcgaa-----tc 1803592  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||| ||| ||||||| ||||||||||||||| |||||    
T  1803593 tcgcactcttttcgagttggttcggttcattgtcagc 1803629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 9469777 - 9469913
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||||||| | | |||||||||||||||  ||||||||| ||||||||||||||||||||| ||||| | | ||||| |||| |||| |     
T  9469777 tcaagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatagaccaattgtcgagtcgaatt 9469876  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
     |||||||| ||||| ||||||||||||||| |||||    
T  9469877 acgaactatattcgagttggttcggttcattgtcagc 9469913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 22184503 - 22184633
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  ||||||| |||| |||||||||||||||  |||||||   ||| ||||||||||||||||| |||||| | | |||| ||||||||||||    
T  22184503 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtc 22184602  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     | ||||||| |||| |||||||||||||||    
T  22184603 ccaaactattgtcgagttggttcggttcatt 22184633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 232
Target Start/End: Original strand, 44378236 - 44378368
Alignment:
Q  88 gaatgatacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaat 187  Q
    |||| |||| || ||||||||| ||||||||||||| ||| ||||||||||||  ||| ||  |||||||||||||||||||||| |||||             
T  44378236 gaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaa--------- 44378326  T
Q  188 tatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
       ||||||||||||| ||||||||||||||||||||||||||||    
T  44378327 ---cgaatcgagtctcaaactattttcgaattggttcggttcatt 44378368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 96 - 237
Target Start/End: Original strand, 28470813 - 28470953
Alignment:
Q  96 cataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaat 195  Q
    |||| |||||||||  ||||||||||||  ||| ||||||| || ||||   ||||||||||||||||||||||||| |||||| ||| ||||| |||||    
T  28470813 catagctcaagttcagctcatttatttaatgaaattaatttacagttcacaattgactcatttggttcatgaaccaagttcaacgaattaattaccgaat 28470912  T
Q  196 cgagtctcgaactattttcgaattggttcggttcattatcag 237  Q
    ||||| ||| ||| ||||||| ||||||  ||||||| ||||    
T  28470913 cgagt-tcgtacttttttcgagttggtttagttcattgtcag 28470953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 36543781 - 36543917
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||||||| ||| |||||||||||||||  ||||||||| || |||||||||||||||||| |||||   | ||||| |||| |||| |     
T  36543781 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggcttatttggttcatgaaccaagttcaatggaccaattgtcgagtcgaatt 36543880  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
     |||||||| ||||| ||||||| ||||||| |||||    
T  36543881 acgaactatattcgagttggttcagttcattgtcagc 36543917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 36156411 - 36156304
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    |||||||||||||||  ||||||| | ||||||||||||| ||||||| |||||| |||||||| ||||||||| |  |||||| |  |||| |||||||    
T  36156411 cgaacttaattttcagctcaagttcggctcatttggttcaagaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttc 36156312  T
Q  225 ggttcatt 232  Q
    ||||||||    
T  36156311 ggttcatt 36156304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 50147035 - 50146928
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    |||||||||||||||  ||||||  |  |||||||||||||||||||| |||||| |||||||| ||||||||| |  |||||| |  ||||||||||||    
T  50147035 cgaacttaattttcagctcaagtccggttcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgaattggttc 50146936  T
Q  225 ggttcatt 232  Q
    ||||||||    
T  50146935 ggttcatt 50146928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 43798372 - 43798255
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcg 192  Q
    ||||||| ||||||||| |||||||||||||  || ||| |||||  | ||||| | ||||||||||||||| ||||| | |||||| | | ||||||||    
T  43798372 atacatagctcaagttcaactcatttatttaatgatcttcattttttactcaagctcgactcatttggttcaagaaccgagttcaacgagttaattatcg 43798273  T
Q  193 aatcgagtctcgaactat 210  Q
    ||||||||||| ||||||    
T  43798272 aatcgagtctcaaactat 43798255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 48339216 - 48339143
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||||||||||  ||||||| |||||||||| |||||||||||| |||||||||||| || |||||||||    
T  48339216 cgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcga 48339143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 56224145 - 56224281
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||| ||||| ||| |||| ||||||||||  ||||||| | ||||||||||| || |||||| |||||| ||| |||| | || || |||     
T  56224145 tcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaaccaagttcaacgaattaattgttgagtcaagtt 56224244  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||| || || ||||||||||||||| |||||    
T  56224245 tcgaactatgtttgagttggttcggttcattgtcagc 56224281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 22721323 - 22721425
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |  | ||||||| ||| ||||||||||||||||| |||||  ||  ||||| ||||||    
T  22721323 ataactcaagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaaccaagttcaatgaactaattaccgaatc 22721421  T
Q  197 gagt 200  Q
    ||||    
T  22721422 gagt 22721425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 52813600 - 52813731
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  ||||||| |||| |||||||||||||||  | |||||   ||| ||||||||||||||||| |||||| | | |||| || ||| ||||    
T  52813600 ctcaagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcaaatagagt 52813699  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
    | | ||||||| |||| |||||||||||||||    
T  52813700 cccaaactattgtcgagttggttcggttcatt 52813731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 9874298 - 9874212
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||||| ||||| |||||| ||| |||||  ||||||| ||| |||||||||| || ||||||||||||||| |||||    
T  9874298 ctcatttggttcatgtaccaatttcaacgaattaattactgaatcgaatcttgaactatttttgagttggttcggttcattgtcagc 9874212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 15697213 - 15697087
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||| | ||| ||||||||||||| |  |||||||   || |||||||||||||| ||| |||||| |||||||| |||| |||||||||||||| |     
T  15697213 ctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaatcaagttcaacgaatcaattgtcgagtcgagtctcgaacttta 15697114  T
Q  212 ttcgaattggttcggttcattatcagc 238  Q
    ||||| |||  |||||||||| |||||    
T  15697113 ttcgagttgtctcggttcattgtcagc 15697087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 48731303 - 48731183
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| ||||||||||||| |  |||||||    | ||||||||||||||||||||||||   | ||||| |||| |||| | |||||||||     
T  48731303 ctcatttaattaacgaacttaatttttagctcaagttcagtttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatttcgaactata 48731204  T
Q  212 ttcgaattggttcggttcatt 232  Q
    ||||| |||||||||||||||    
T  48731203 ttcgagttggttcggttcatt 48731183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 6866220 - 6866149
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    |||||||||||||||  ||||||| | ||||||||||||||||||||| ||  || ||||||||||||||||    
T  6866220 cgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtttgacgaatcaattatcgaatc 6866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 16742468 - 16742346
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||||||  |||||||||||| ||||||||||||||||           ||||||||||||||||||||| |||||| ||||||||  ||||||||    
T  16742468 aactcaagttcagctcatttatttaacgaacttaattttcaa-----------ctcatttggttcatgaaccaagttcaacgaatcaattgccgaatcga 16742380  T
Q  199 gtctcgaactattttcgaattggttcggttcatt 232  Q
    ||   |||||||| ||||||  ||| ||||||||    
T  16742379 gttctgaactattatcgaatgagtttggttcatt 16742346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 43812174 - 43812099
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||||||||| || ||||| | | ||||||||||||||||||| ||| || |||||||| |||||||||||    
T  43812174 cgaacttaattttcagtttaagttcggcccatttggttcatgaaccaagttcgacgaatcaattgtcgaatcgagt 43812099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 50606007 - 50606138
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || |  |||||| |||| |    
T  50606007 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 50606106  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  ||||||||||||||||||||    
T  50606107 gtcgaactataatcgaattggttcggttcatt 50606138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 7505524 - 7505606
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaac 179  Q
    ||||||||||||| ||||||||| ||| |||| |||||||| |  ||||||| | ||||||||||||||||| ||| ||||||    
T  7505524 ataactcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaac 7505606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 43387311 - 43387387
Alignment:
Q  156 tttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||||||||||||||||||| | | |||| ||||||| ||||   ||||||| |||| |||||||||||||||    
T  43387311 tttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtcctaaactattgtcgagttggttcggttcatt 43387387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 49083379 - 49083239
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||| |  |||||||| ||| |||| ||||||||||  |||||||  ||||||| |||| ||||||||| ||||||| |  ||||||||| ||    
T  49083379 ataactcaagtacagctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaacagactaattatcgagtc 49083280  T
Q  197 gagtctcgaactattttcgaattggttcggttcattatcag 237  Q
     | | || ||||||| || | |||||||| |||||| ||||    
T  49083279 caatttcaaactattctcaagttggttcgattcattgtcag 49083239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 50710908 - 50710840
Alignment:
Q  104 aagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaa 172  Q
    |||||| ||| ||||||||| ||| |||||||||||| |||| || |||||||||| ||||||||||||    
T  50710908 aagttcaacttatttatttaacgagcttaattttcaactcaatttcgactcatttgattcatgaaccaa 50710840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 52733838 - 52733747
Alignment:
Q  104 aagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    |||||| ||| ||||||||| |||||||||||||||  |||| ||  ||||||||||||||||||  ||||||||| | | ||||||||||||    
T  52733838 aagttcaacttatttatttaacgaacttaattttcagctcaa-ttcaactcatttggttcatgaattaaattcaacgagttaattatcgaatc 52733747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 12789693 - 12789562
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  |||||||   ||| || ||||||| |||||| ||||||  || |  |||||| |||| |    
T  12789693 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattagatatcgagtcgaat 12789594  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  12789593 gtcgaactataatcgagttggttcggttcatt 12789562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 21441580 - 21441711
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || |  |||||| |||| |    
T  21441580 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 21441679  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  21441680 gtcgaactataatcgagttggttcggttcatt 21441711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 36644075 - 36643989
Alignment:
Q  151 actcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||||||||| || |||||  | | ||||||| ||| ||||||||||||||||| || ||||||||||| ||| |||||    
T  36644075 actcatttggttcatgaacaaagttcaatgagttaattatcaaat-gagtctcgaactattttggagttggttcggttgattgtcagc 36643989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 52706212 - 52706287
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaa 172  Q
    ||||||||||||| ||||||||| ||| |||||||||| || |  ||||||| | ||| |||||||||||||||||    
T  52706212 ataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 52706287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 53369871 - 53370002
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || || |||||| | || |    
T  53369871 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaat 53369970  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  53369971 gtcgaactataatcgagttggttcggttcatt 53370002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 4274656 - 4274566
Alignment:
Q  142 tcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    ||||||| | |||||||| |||||||| ||  |||||| |   |||| ||||||| ||| ||||||||||||||| |||||||||||||||    
T  4274656 tcaagttcggctcatttgtttcatgaatcaggttcaacgagataattgtcgaatcaagtttcgaactattttcgagttggttcggttcatt 4274566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 9959382 - 9959467
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |||||||| ||||||||| || |||||| | | | |||| ||||||||| |||||||||| |||| ||||||||||||||| |||||    
T  9959382 ctcatttgattcatgaac-aagttcaacgagttatttatagaatcgagtttcgaactattgtcgagttggttcggttcattgtcagc 9959467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 25102728 - 25102646
Alignment:
Q  111 actcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcga 193  Q
    ||||||||||||| | |  ||||| ||||| |||| || | ||||||||||||||||||||||  |||||||||| |||||||    
T  25102728 actcatttatttaacaagtttaatgttcaactcaatttcggctcatttggttcatgaaccaaacgcaacaaatcatttatcga 25102646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 27891397 - 27891522
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||||||| | || || |||||||  |||||||   |||||||| |||||||||||| |||||| | | |||| |||||||||||  |||||||||    
T  27891397 ctcatttatttaacaaatttgattttcagctcaagttcagctcatttg-ttcatgaaccaagttcaacgagttaattgtcgaatcgagttccgaactatt 27891495  T
Q  212 ttcgaattggttcggttcattatcagc 238  Q
     |||| ||| |||| |||||| |||||    
T  27891496 gtcgagttgattcgattcattgtcagc 27891522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 233
Target Start/End: Original strand, 34718152 - 34718270
Alignment:
Q  115 atttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttc 214  Q
    ||||||||| |||| ||||||||||  | ||||| ||||||||| |||||| ||||||||||||| | |  | | || |||||||| || ||||||| ||    
T  34718152 atttatttaacgaaattaattttcagctgaagttcgactcatttagttcataaaccaaattcaacgagttgactgtcaaatcgagtttcaaactattgtc 34718251  T
Q  215 gaattggttcggttcatta 233  Q
    || ||  ||||||||||||    
T  34718252 gagttatttcggttcatta 34718270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 50710842 - 50710788
Alignment:
Q  184 caattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |||||||| |||||||| ||||||||||||||| ||| ||||||||||| |||||    
T  50710842 caattatcaaatcgagtatcgaactattttcgagttgattcggttcattgtcagc 50710788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 44791373 - 44791256
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| ||||||||||||||| |||||||    ||| || |||||||||||||| ||||||  || |  |||||| |||| | |||||||||     
T  44791373 ctcatttaattaacgaacttaattttcagttcaagtgcagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 44791274  T
Q  212 ttcgaattggttcggttc 229  Q
     |||| ||||||||||||    
T  44791273 atcgagttggttcggttc 44791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 38791742 - 38791821
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||||||||||||||| |||||| | | |||| |||||| || || | ||||||| |||| |||||||||||||||    
T  38791742 ctcatttggttcatgaaccaagttcaacgagttaattgtcgaattgattc-caaactattgtcgagttggttcggttcatt 38791821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 15564263 - 15564208
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtt 148  Q
    ||||| |||||||||| | |||||||||||| | |||||||||||||||| |||||    
T  15564263 atacacaactcaagtttggctcatttatttaacaaacttaattttcaatttaagtt 15564208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 15576910 - 15576855
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtt 148  Q
    ||||| |||||||||| | |||||||||||| | |||||||||||||||| |||||    
T  15576910 atacacaactcaagtttggctcatttatttaacaaacttaattttcaatttaagtt 15576855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 19852977 - 19853108
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || || |||||| |||| |    
T  19852977 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 19853076  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     || ||||||  |||| |||||||| ||||||    
T  19853077 gtcaaactataatcgagttggttcgattcatt 19853108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 26127650 - 26127555
Alignment:
Q  88 gaatgatacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaat 183  Q
    |||| |||||||  |||||||  ||||||||||||| | || |||||||| || | || || |||||| ||| ||||||||||||||||| |||||    
T  26127650 gaattatacatagttcaagtttaactcatttatttaacaaatttaatttttaagtgaatttcgactcaattgattcatgaaccaaattcatcaaat 26127555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 32397815 - 32397712
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    ||||||||||||| | |||||||| | || ||||| |||||||||||| |||  | |||||||| |||| |||| |  |||||| |  ||||||||||||    
T  32397815 cgaacttaatttttagttcaagttcggcttatttgattcatgaaccaagttcggcgaatcaattgtcgagtcgaattacgaactttaatcgaattggttc 32397716  T
Q  225 ggtt 228  Q
    ||||    
T  32397715 ggtt 32397712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 45674834 - 45674965
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| ||||||||| ||| |||| ||||||||||  ||||||    ||| || |||||||||||||| ||| ||  || |  |||||| |||| |    
T  45674834 ctcaagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcgacggattagatatcgagtcgaat 45674933  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  45674934 gtcgaactataatcgagttggttcggttcatt 45674965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 48977575 - 48977706
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||| ||||||||||  ||| ||    |||||| ||||||||||| || |||||| ||| || |||||| |||| |    
T  48977575 ctcaagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcattaggttcatgaacgaagttcaacgaattaaatatcgagtcgaat 48977674  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     ||||| |||  |||| |||||||||||||||    
T  48977675 gtcgaattataatcgagttggttcggttcatt 48977706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 24550068 - 24550174
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcat-gaaccaaattcaacaaatcaattatc 191  Q
    ||||||||||||||||| ||||||||| ||| | ||||||||||| |  |||||||  ||||| |||||| ||  || ||| |||||| ||||||||| |    
T  24550068 atacataactcaagttcaactcatttagttaacaaacttaatttttagctcaagttcaactcagttggtttataaaatcaagttcaacgaatcaattacc 24550167  T
Q  192 gaatcga 198  Q
    || ||||    
T  24550168 gagtcga 24550174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 38493078 - 38493032
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||||||||||||||||||||||||| | |||| |||| ||||    
T  38493078 ctcatttggttcatgaaccaaattcaacaagttaattgtcgagtcga 38493032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 13761824 - 13761917
Alignment:
Q  127 aacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattg 220  Q
    |||||||||||||  |||| ||   ||||||||||||||||||||| | |||| | | |||| |||||||||||  |||||| | |||||||||    
T  13761824 aacttaattttcagctcaaattcagctcatttggttcatgaaccaagtccaacgagttaattgtcgaatcgagttccgaactttgttcgaattg 13761917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 41857181 - 41857120
Alignment:
Q  153 tcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttc 214  Q
    |||||||||||||||||||||| |||| |||||||| || |||   |||||||||| |||||    
T  41857181 tcatttggttcatgaaccaaatacaacgaatcaattctcaaattatgtctcgaacttttttc 41857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 88 - 238
Target Start/End: Original strand, 21074 - 21223
Alignment:
Q  88 gaatgatacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaat 187  Q
    |||| |||| || ||||||||| |||||||||||||  || |||||||||||| ||||||| ||||| ||||||||||||||||| |||||| |||||||    
T  21074 gaatcatacttagctcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgactc-tttggttcatgaaccaagttcaacgaatcaat 21172  T
Q  188 tatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  21173 tatcgaatcgagtctcgaactattttcgagttggttcggttcattgtcagc 21223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 18250133 - 18250003
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| ||| | |||||||||| ||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  18250133 tcaagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtc 18250034  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    | ||||||||||||| |||||||||||||||    
T  18250033 ttgaactattttcgagttggttcggttcatt 18250003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 99 - 238
Target Start/End: Complemental strand, 17025504 - 17025365
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||||||| |||||||| |||||| | ||||||||||||||||    
T  17025504 aactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgagtcaattatcgaatcga 17025405  T
Q  199 gtctcgaactattttcgaattggttcggttcattatcagc 238  Q
      || ||||||||||||| ||||||||||||||| |||||    
T  17025404 accttgaactattttcgagttggttcggttcattgtcagc 17025365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 18740361 - 18740228
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||| || ||  | ||||||||| ||||||    
T  18740361 aactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaatgagtcaattatcaaatcga 18740262  T
Q  199 gtctcgaactattttcgaattggttcggttcatt 232  Q
     ||||||||||||||||| |||||||||||||||    
T  18740261 atctcgaactattttcgagttggttcggttcatt 18740228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 101 - 238
Target Start/End: Complemental strand, 21760724 - 21760587
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| ||||||||||||| |||  ||| ||||||| ||||||| |||||||||||||| ||||| || |||||| ||||||||||||||||||||    
T  21760724 ctcaagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagt 21760625  T
Q  201 ctcgaactattttcgaattggttcggttcattatcagc 238  Q
     ||||||||||||||| |||||||||||||||||||||    
T  21760624 ttcgaactattttcgagttggttcggttcattatcagc 21760587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 46573755 - 46573622
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||||||||||||| ||| |||||||||||| | ||||| ||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  46573755 aactcaagttcgactcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcga 46573656  T
Q  199 gtctcgaactattttcgaattggttcggttcatt 232  Q
     ||||||| |||||| || |||||||||||||||    
T  46573655 atctcgaattatttttgagttggttcggttcatt 46573622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 26719820 - 26719955
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||| | |||  || |||||||||||||||||     
T  26719820 tcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagta 26719919  T
Q  202 tcgaactattttcgaattggttcggttcattatcag 237  Q
    ||||||||||||||| |||||||| |||||| ||||    
T  26719920 tcgaactattttcgagttggttcgattcattgtcag 26719955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 49034364 - 49034237
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||||||||||||||||  ||| |||||||||||| ||||||| ||||||||||||||||||||||| |||||| || |||||| |||||||| |     
T  49034364 tcaagttcgactcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcgaatt 49034265  T
Q  202 tcgaactattttcgaattggttcggttc 229  Q
    ||||||||||||||| |||| |||||||    
T  49034264 tcgaactattttcgagttggatcggttc 49034237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 35543693 - 35543560
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| |||||||||||   ||| |||||||||||| ||||||| ||||||||| ||||||||||||| |||||| ||||||||||||||| |||||    
T  35543693 tcaagttcaactcatttatt---cgagcttaattttcaactcaagttcgactcatttagttcatgaaccaagttcaacgaatcaattatcgaatggagtc 35543597  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    || |||||||||||| |||||||| |||||| |||||    
T  35543596 tcaaactattttcgagttggttcgattcattgtcagc 35543560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 36472444 - 36472580
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||| ||||||||| ||| |||||||||||| ||||||| | ||||||||||||||||||||| |||||| ||||| ||||||||||||||     
T  36472444 tcaagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatttggttcatgaaccaagttcaacgaatcatttatcgaatcgagta 36472543  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    || |  ||||||||| ||||||||||||||| |||||    
T  36472544 tcaagttattttcgagttggttcggttcattgtcagc 36472580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 33899082 - 33898948
Alignment:
Q  104 aagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctc 203  Q
    |||||| ||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||| | |||  ||  |||| ||||||||| | ||    
T  33899082 aagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaactaattctcgaatcgaatatc 33898983  T
Q  204 gaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||| ||||||||||||||| |||||    
T  33898982 gaactattttcgagttggttcggttcattgtcagc 33898948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 238
Target Start/End: Complemental strand, 23227142 - 23227003
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||||||| |||||||||||| |||||||||||||||  |||||||   |||||||| |||||| ||||| ||||||||   |||| |||||||||    
T  23227142 aactcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcga 23227043  T
Q  199 gtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    || |||||||||| |||| ||||||||| |||||| ||||    
T  23227042 gtttcgaactattgtcgagttggttcggatcattaccagc 23227003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 238
Target Start/End: Complemental strand, 23236295 - 23236156
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||||||| |||||||||||| |||||||||||||||  |||||||   |||||||| |||||| ||||| ||||||||   |||| |||||||||    
T  23236295 aactcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcga 23236196  T
Q  199 gtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    || |||||||||| |||| ||||||||| |||||| ||||    
T  23236195 gtttcgaactattgtcgagttggttcggatcattaccagc 23236156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 238
Target Start/End: Original strand, 33019321 - 33019442
Alignment:
Q  117 ttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcga 216  Q
    ||||||| |||  ||||||||||| ||||||| |||| ||||| ||| |||||||| |||||| || ||||||||||||||||| |||||||||||| ||    
T  33019321 ttatttaacgagtttaattttcaactcaagttcgacttatttgattcgtgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttga 33019420  T
Q  217 attggttcggttcattatcagc 238  Q
     ||||||||||||||| |||||    
T  33019421 gttggttcggttcattgtcagc 33019442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 37401683 - 37401570
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    |||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| |  |||||| |  |||||||||||     
T  37401683 cgaacttaattttcaactcaagtttggctcatttggttcatgaatcaagttcaacaaatcaattttcgaatcgaattacgaactctaatcgaattggttt 37401584  T
Q  225 ggttcattatcagc 238  Q
    |||||||| |||||    
T  37401583 ggttcattgtcagc 37401570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 32356968 - 32357102
Alignment:
Q  104 aagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctc 203  Q
    |||||| |||| |||| ||| ||||||| |||||||| |||| || | ||||||| ||||||||| ||| |||||| ||| |||||||||||||||||||    
T  32356968 aagttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaatcaagttcaacgaattaattatcgaatcgagtctc 32357067  T
Q  204 gaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||  | |||||| |||||||| |||||    
T  32357068 gaactatttttaagttggtttggttcattgtcagc 32357102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 29037911 - 29037806
Alignment:
Q  111 actcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactat 210  Q
    |||||||| |||| || ||||||||||||| ||||||| | |||||||||||||||||| || |||| ||||| ||||| ||||||||||||| ||||||    
T  29037911 actcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaacaaagttcagcaaattaattaccgaatcgagtctcaaactat 29037812  T
Q  211 tttcga 216  Q
    ||||||    
T  29037811 tttcga 29037806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 7447881 - 7448017
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||||||| ||| |||||||||||||||  ||||||| | ||||||||||||||||||||| |||||  || ||||| |||| |||| |     
T  7447881 tcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaatt 7447980  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
      ||||||| ||||| ||||||||||||||| |||||    
T  7447981 atgaactatattcgagttggttcggttcattgtcagc 7448017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 31491820 - 31491956
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||| ||||||||| |||||||||| || | || ||||| |||||||||||||||||   ||| |||||| ||| |||||||||||||| ||    
T  31491820 tcaagttcaactaatttatttaacgaacttaatattgagtttaagttcgactcatttggttcatgtgtcaagttcaacgaattaattatcgaatcgaatc 31491919  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    || ||||||||| || ||| ||||||||||| |||||    
T  31491920 tcaaactatttttgagttgattcggttcattgtcagc 31491956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 33124710 - 33124830
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||||||| |||||||||||||||  |||||||  | ||||||||||||| |||||| |||||| | | |||| ||||||||||| || |||||||    
T  33124710 ctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtttcaaactatt 33124809  T
Q  212 ttcgaattggttcggttcatt 232  Q
     |||| |||||||||||||||    
T  33124810 gtcgagttggttcggttcatt 33124830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 222367 - 222236
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  ||||||| |||| |||| |||||||||| ||||||||   ||| |||||||||||||||||||||||| | | |||| ||||||| |||    
T  222367 ctcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaaccaaattcaacgagttaattgtcgaatcaagt 222268  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
    | | ||||||| |||| |||||||||||||||    
T  222267 cccaaactattgtcgagttggttcggttcatt 222236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 33935512 - 33935643
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  ||||||| |||| |||||||||||||||  |||||||   ||| ||||||||||||||||| |||||| | | ||||||||||||||||    
T  33935512 ctcaagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattatcgaatcgagt 33935611  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
    | | ||||||| |||| |||||||| ||||||    
T  33935612 cccaaactattgtcgagttggttcgattcatt 33935643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 231
Target Start/End: Original strand, 10618925 - 10619055
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||||||| |||||||||||||||  |||||||   ||||||| ||||||||||||| |||||| | | |||| |||||||||||    
T  10618925 ctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacgagttaattgtcgaatcgagt 10619024  T
Q  201 ctcgaactattttcgaattggttcggttcat 231  Q
      | ||||||| |||| ||| ||||||||||    
T  10619025 tccaaactattgtcgagttgattcggttcat 10619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 44422043 - 44421911
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaa-ttttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgag 199  Q
    |||||||||  ||||||| |||| ||||||||| ||||||  |||||||   ||| ||||||||||||||||| |||||| | | |||| ||||||||||    
T  44422043 ctcaagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgag 44421944  T
Q  200 tctcgaactattttcgaattggttcggttcatt 232  Q
    || | ||||||| |||| |||||||||||||||    
T  44421943 tcccaaactattgtcgagttggttcggttcatt 44421911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 22075068 - 22075198
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||||||||||| |||||||||||||||  |||||||   |||||||||||| |||||||  |||||| | | |||| |||||||||||     
T  22075068 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaaccacgttcaacgagttaattgtcgaatcgagtt 22075167  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
       ||||||| |||| |||||||||||||||    
T  22075168 ctaaactattatcgagttggttcggttcatt 22075198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 194
Target Start/End: Original strand, 30919426 - 30919519
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaa 194  Q
    ||||||||| |||||||||| || |||  ||| ||||||| ||||||| |||||||||||||| | |||||| |||||| ||||||||||||||    
T  30919426 ctcaagttcaactcatttatctaacgagtttagttttcaactcaagttcgactcatttggttcgtaaaccaagttcaacgaatcaattatcgaa 30919519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 33171677 - 33171544
Alignment:
Q  99 aactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||||||| ||||||||||||  |||||||||||| |  |||||||   |||||||||||||| || ||| ||||||||   |||| ||  |||||    
T  33171677 aactcaagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaatcaagttcaacaagataattgtcttatcga 33171578  T
Q  199 gtctcgaactattttcgaattggttcggttcatt 232  Q
    || |||||||||| |||| ||||||||| |||||    
T  33171577 gtttcgaactattatcgagttggttcggatcatt 33171544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 37334282 - 37334413
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || || ||||||||||| |    
T  37334282 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgaatcgaat 37334381  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  37334382 gtcgaactataatcgagttggttcggttcatt 37334413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 45055728 - 45055863
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||||| ||||||||| ||| |||||||||| || |  ||||||| | ||| ||||||||||||||||| |||||| ||  ||||| ||| ||    
T  45055728 ataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtc 45055827  T
Q  197 gagtctcgaactattttcgaattggttcggttcatt 232  Q
    ||||  |||||| | ||||| |||  ||||||||||    
T  45055828 gagttccgaactttattcgagttgtatcggttcatt 45055863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 45176249 - 45176380
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| ||||||||| ||| |||||||||||||||  | |||||   ||| ||||||||||||||||| ||||||  || ||||||||| |||| |    
T  45176249 ctcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgtttggttcatgaaccaagttcaacggattaattatcgagtcgaat 45176348  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     || ||||||  |||| || ||||||||||||    
T  45176349 gtcaaactataatcgagtttgttcggttcatt 45176380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 3942204 - 3942317
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    |||||||||||||||  |||||| ||  |||||||||||||||||||| |||||  |||||| | ||||||||| |  |||||| |  |||| |||||||    
T  3942204 cgaacttaattttcagctcaagtctggttcatttggttcatgaaccaagttcaatgaatcaactgtcgaatcgaattacgaactttaatcgagttggttc 3942303  T
Q  225 ggttcattatcagc 238  Q
    |||||||| |||||    
T  3942304 ggttcattgtcagc 3942317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 11595941 - 11595800
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    |||||||||| || ||||||||| ||| |||||||||| || |  ||||||| | ||| ||||||||||||||||| |||||| ||  ||||| ||| ||    
T  11595941 ataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtc 11595842  T
Q  197 gagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||  |||||| | ||||| |||  |||||||||| |||||    
T  11595841 gagttccgaactttattcgagttgtatcggttcattgtcagc 11595800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 48634461 - 48634582
Alignment:
Q  111 actcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactat 210  Q
    ||||||||||||| ||||||||||||| |  |||||||  |||||||||||||||||||||| |||||| | | |||   ||||||||||   |||||||    
T  48634461 actcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaatctacgaatcgagttctgaactat 48634560  T
Q  211 tttcgaattggttcggttcatt 232  Q
    | |||| ||| || ||||||||    
T  48634561 tgtcgagttgatttggttcatt 48634582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 10096486 - 10096594
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||||||||||||||||    ||||||||  |||||||||||||||||||||| ||| |  ||  |||| |||| |||||| |||||||||     
T  10096486 ctcatttagttagcgaacttaatttctcgttcaagttcaactcatttggttcatgaaccaagttcgatgaacaaattgtcgagtcgagtttcgaactatg 10096585  T
Q  212 ttcgaattg 220  Q
    |||||||||    
T  10096586 ttcgaattg 10096594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 5776271 - 5776140
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || || |||||| |||| |    
T  5776271 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 5776172  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  5776171 gtcgaactataatcgagttggttcggttcatt 5776140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 36927003 - 36927134
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| ||||||||| ||| ||||||||||||| |  ||||||   |||| || |||||||||||||| ||||||  || |  |||||| |||| |    
T  36927003 ctcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 36927102  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  36927103 gtcgaactataatcgagttggttcggttcatt 36927134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 41449795 - 41449881
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||| ||||||||||| |||||| |   |||| ||||||||||| |||||||||| |||| ||||||||| ||||| |||||    
T  41449795 ctcatttggatcatgaaccaagttcaacgagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcattgtcagc 41449881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 46652716 - 46652642
Alignment:
Q  159 ggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatta 233  Q
    |||||||||||||| | ||||| || |||||||||||||| | ||||||||| ||||||||||| ||||| ||||    
T  46652716 ggttcatgaaccaagtccaacagattaattatcgaatcgaatttcgaactatattcgaattggtccggtttatta 46652642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 27231656 - 27231583
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    ||||||||||||||| |||||||| | |||||||| | |||||| ||| ||| || ||||||||||||||||||    
T  27231656 cgaacttaattttcagttcaagttcggctcatttgatacatgaatcaagttcgacgaatcaattatcgaatcga 27231583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 665977 - 665857
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| |||||||||||||||  ||||||    ||| || ||||||||||||||||| |||  || || |||||| |||| | |||||||||     
T  665977 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaatttaacggattaaatatcgagtcgaatgtcgaactata 665878  T
Q  212 ttcgaattggttcggttcatt 232  Q
     |||| |||||||||||||||    
T  665877 atcgagttggttcggttcatt 665857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 17608717 - 17608844
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| ||||| ||| ||  |||||||||||||||  ||||||| | |||||||||||||| |||||| ||| || ||||||||   ||||||| |     
T  17608717 tcaagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaagttcgacgaatcaatt---gaatcgaatt 17608813  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     |||||| || |||| ||| |||||||||||    
T  17608814 acgaacttttatcgagttgattcggttcatt 17608844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 23237662 - 23237587
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaa 172  Q
    ||||||||||||| ||||||||| ||| ||||||||||| | || ||||||| | || ||| ||||||||||||||    
T  23237662 ataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaa 23237587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 24128589 - 24128510
Alignment:
Q  153 tcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||||||||||||||||||||| | | |||||||||||| |||  |||| ||| ||||| |  ||||||||||||    
T  24128589 tcatttggttcatgaaccaaattcaacgagttaattatcgaatcaagttccgaaatatgttcgagtgtgttcggttcatt 24128510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 43052876 - 43053007
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  ||||| || ||| ||||||||||||||   ||||||    |||||| |||||||||||||| ||||||  || || |||||| |||| |    
T  43052876 ctcaagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 43052975  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  43052976 gtcgaactataatcgagttggttcggttcatt 43053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 40480196 - 40480054
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactc-atttggttcatgaaccaaattcaacaaatcaattatcgaat 195  Q
    ||||||||||||| ||||||||| ||| |||||||||| || |  ||||||| | |||  ||||||||||||||||| |||||| ||  ||||| ||| |    
T  40480196 ataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaaccaagttcaacgaactaattaccgact 40480097  T
Q  196 cgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    |||||  |||||| | ||||| |||  || |||||||| ||||    
T  40480096 cgagttccgaactttattcgagttgtatcagttcattaccagc 40480054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 5795077 - 5794946
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || |  |||||| |||| |    
T  5795077 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 5794978  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||  |||||||||||||||    
T  5794977 gtcgaactataatcgggttggttcggttcatt 5794946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 232
Target Start/End: Original strand, 20400997 - 20401131
Alignment:
Q  98 taactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcg 197  Q
    ||||||||||||  |||||||| |||  ||||||||| || |  |||||||    ||| | ||||||||||||||||||||   |  ||||| ||| |||    
T  20400997 taactcaagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggttcatgaaccaaattcaatggactaattaccgagtcg 20401096  T
Q  198 agtctcgaactattttcgaattggttcggttcatt 232  Q
    | | ||||||||| ||||| |||||||||||||||    
T  20401097 aatttcgaactatattcgagttggttcggttcatt 20401131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 179
Target Start/End: Complemental strand, 48505929 - 48505851
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaac 179  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    |||||| |||||||||||||| ||||||    
T  48505929 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaaccaagttcaac 48505851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 37101239 - 37101148
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcga 193  Q
    ||||||||  ||| ||||||||| | |||||||||||||| ||||| || ||||||||| ||| |||| | | ||||||| || |||||||||    
T  37101239 ctcaagttaaacttatttatttaacaaacttaattttcaactcaag-ttcactcatttgattcgtgaatcgagttcaacagattaattatcga 37101148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 13312022 - 13312154
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgag-- 199  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||| | |||  || ||||||||||||||||      
T  13312022 tcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagta 13312121  T
Q  200 tctcgaactattttcgaattggttcggttcatt 232  Q
    | ||||||||||||||| |||||||||||||||    
T  13312122 tatcgaactattttcgagttggttcggttcatt 13312154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 3081858 - 3081728
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||||||| ||| ||| |||||||||||| ||||||| |||||||||||||| |||||||| |||||| || |||||||||||||||||     
T  3081858 tcaagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcgaatcgagta 3081759  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    |||||||||||||||  ||||||||||||||    
T  3081758 tcgaactattttcgagctggttcggttcatt 3081728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 7437304 - 7437440
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||||||||||| ||| |||||||||||| | ||||| |||||||||||||| |||||||| |||||| || | |||||||||||||||     
T  7437304 tcaagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaaccaagttcaacgaacccattatcgaatcgagta 7437403  T
Q  202 tcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||||| || ||||||||||||| ||||    
T  7437404 tcgaactattttcgagttagttcggttcattaccagc 7437440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 18095513 - 18095649
Alignment:
Q  96 cataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaat 195  Q
    |||| |||||||||  |||||||||||| ||||||||||||| || ||||||| |||| ||||||||| |||||||| |||||| |||| ||||||||||    
T  18095513 catagctcaagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaaccaagttcaacgaatccattatcgaat 18095612  T
Q  196 cgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||| |||| |||| || |||||| ||||||||    
T  18095613 cgagtctcaaactttttttgagttggtttggttcatt 18095649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 18099810 - 18099946
Alignment:
Q  96 cataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaat 195  Q
    |||| |||||||||  |||||||||||| ||||||||||| | || |||| || |||||||||||||| |||||||| |||||| |||| ||||||||||    
T  18099810 catagctcaagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaaccaagttcaacgaatccattatcgaat 18099909  T
Q  196 cgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||| |||| ||||||| |||||| ||||||||    
T  18099910 cgagtctcaaacttttttcgagttggtttggttcatt 18099946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 17441151 - 17441288
Alignment:
Q  96 cataactcaagttcgac-tcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaa 194  Q
    ||||||||||||||| | ||||||||||  ||| |||||||||||| |||||||  ||||||||||||||||||| || |||||| ||| ||||| | ||    
T  17441151 cataactcaagttcggcctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatgaactaagttcaacgaattaattaccaaa 17441250  T
Q  195 tcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||| ||||||||||||||  |||||||||||||||    
T  17441251 tcgagtttcgaactattttcgggttggttcggttcatt 17441288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 4441441 - 4441311
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||||||||||| |||||||||||||||| |||||||   ||||||| |||| |||||||| |||||| |   |||| |||||||||||     
T  4441441 tcaagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaaccaagttcaacgagctaattgtcgaatcgagtt 4441342  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    |||||||||| |||| |||||||||||||||    
T  4441341 tcgaactattgtcgagttggttcggttcatt 4441311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 5640369 - 5640262
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||||| ||| || |||||||||||||||||| |  |||||| |  |||| |||||||    
T  5640369 cgaacttaattttcagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaactctaatcgagttggttc 5640270  T
Q  225 ggttcatt 232  Q
    ||||||||    
T  5640269 ggttcatt 5640262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 1501858 - 1501984
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||||||| |||||||||||||||  ||||||| |  ||||||||||||||||| || |||||| | | |||| || |||||||| |||||| |||    
T  1501858 ctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaacgaagttcaacgagttaattgtcaaatcgagtttcgaacaatt 1501957  T
Q  212 ttcgaattggttcggttcattatcagc 238  Q
     |||| ||||||||||||||| |||||    
T  1501958 gtcgagttggttcggttcattgtcagc 1501984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 11460102 - 11460024
Alignment:
Q  154 catttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||  ||||||||| | || |||| ||||||||||    
T  11460102 catttggttcatgaaccaagttcaacgaatcaattatcgaatcgagttccgaactattattgagttggatcggttcatt 11460024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 6999278 - 6999390
Alignment:
Q  113 tcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattt 212  Q
    |||||| |||| | |||||||||||||  |||||||   ||||||| |||||| |||||| |||||| ||| ||||||||||||||||||| |||||||     
T  6999278 tcatttgtttaacaaacttaattttcagctcaagttcagctcatttagttcattaaccaagttcaacgaattaattatcgaatcgagtctcaaactattg 6999377  T
Q  213 tcgaattggttcg 225  Q
    |||| ||| ||||    
T  6999378 tcgagttgcttcg 6999390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 10961913 - 10961842
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    |||||||||||||||  |||| || ||||||||||||||||||||||| |||||| |||||||| |||||||    
T  10961913 cgaacttaattttcagctcaaattcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatc 10961842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 33110453 - 33110588
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||||||||||||||| ||| |||||||||| || |  | ||||| | ||| ||||||||||||||||| |||||| ||  ||||| ||| ||    
T  33110453 ataactcaagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtc 33110552  T
Q  197 gagtctcgaactattttcgaattggttcggttcatt 232  Q
    ||||  |||||| | ||||| |||  ||||||||||    
T  33110553 gagttccgaactttattcgagttgtatcggttcatt 33110588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 27985005 - 27984932
Alignment:
Q  127 aacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||||||| |||||||| | |||||||||||||| |||||| ||| || |||||||| |||||| ||||    
T  27985005 aacttaattttcagttcaagttcggctcatttggttcataaaccaagttcgacgaatcaattgtcgaattgagt 27984932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 32163551 - 32163635
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    |||||||| ||| |||||||||||||||| ||||||||  |||||| |||||||||||||  |||||| | | |||| |||||||    
T  32163551 ctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaaccatgttcaaccagttaattgtcgaatc 32163635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 9950877 - 9950830
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaa 172  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||    
T  9950877 cgaacttaattttcaactcaagttcggctcatttggttcatgaaccaa 9950830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 30774029 - 30774101
Alignment:
Q  93 atacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcat 165  Q
    ||||||| || ||||||  |||||||||||| ||  |||||| ||||| |||| |||||||||||||||||||    
T  30774029 atacatagcttaagttcatctcatttatttaacgtgcttaatattcaactcaaatttgactcatttggttcat 30774101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 2156010 - 2156072
Alignment:
Q  113 tcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaatt 175  Q
    ||||||| ||| | |||| ||||||||  |||||||| ||||||||||||||||||| |||||    
T  2156010 tcatttagttaacaaactaaattttcagatcaagtttaactcatttggttcatgaactaaatt 2156072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 2962832 - 2962782
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggtt 162  Q
    |||||||||||| | |||||||||||||| |||| ||| ||||||||||||    
T  2962832 ctcatttatttaactaacttaattttcaactcaaatttaactcatttggtt 2962782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 232
Target Start/End: Original strand, 10346717 - 10346851
Alignment:
Q  98 taactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcg 197  Q
    ||||||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || |  ||| || |||    
T  10346717 taactcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatagagtcg 10346816  T
Q  198 agtctcgaactattttcgaattggttcggttcatt 232  Q
    | | |||||||||  |||| |||||| ||||||||    
T  10346817 aatgtcgaactataatcgatttggtttggttcatt 10346851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 12428886 - 12428924
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttca 139  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  12428886 ctcaagttcggctcatttatttaacgaacttaattttca 12428924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 17507384 - 17507274
Alignment:
Q  127 aacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcgg 226  Q
    |||||||||||||  |||| ||   |||||||  |||||||| |||||||||||| | ||||||| |||||||| || |||   | || |||||||||||    
T  17507384 aacttaattttcagctcaaattgagctcatttaattcatgaatcaaattcaacaagttaattatcaaatcgagtttcaaacagctatcaaattggttcgg 17507285  T
Q  227 ttcattatcag 237  Q
    ||| |||||||    
T  17507284 ttccttatcag 17507274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 2958465 - 2958404
Alignment:
Q  88 gaatgatacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagttt 149  Q
    |||| |||||| ||| ||||| |||||| ||||||| | |||||||||||||| ||||||||    
T  2958465 gaattatacattacttaagtttgactcaattatttaactaacttaattttcaactcaagttt 2958404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 96 - 238
Target Start/End: Original strand, 14420 - 14562
Alignment:
Q  96 cataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaat 195  Q
    ||||||| ||||||| |||||||||||  ||| |||||||||| | |||||||  | |||||||||||||||||||| |||||  ||||||||| |||||    
T  14420 cataactaaagttcggctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatgaaccaagttcaatgaatcaattaccgaat 14519  T
Q  196 cgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||| ||||||||||||||  ||||||||||||||| |||||    
T  14520 cgagtttcgaactattttcgggttggttcggttcattgtcagc 14562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 32923 - 32795
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||| | ||||||||||| ||| |||||||| ||| ||||||| ||||||||||||   |||||||| |||||| || ||||| |||||||||||     
T  32923 tcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcgagta 32826  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||||||||| |||||||||||||||    
T  32825 tcgaactattttcgagttggttcggttcatt 32795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 43384834 - 43384924
Alignment:
Q  142 tcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||  |||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  43384834 tcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcatt 43384924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 1091726 - 1091858
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| |||||||| |||  ||||||||||||| || ||| ||| ||||| ||||||||||||| ||| |||||| ||| ||||||||||||||||    
T  1091726 ctcaagttcaactcatttgtttgacgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattatcgaatcgagt 1091825  T
Q  201 ctcgaactattttcgaattggttcggttcatta 233  Q
    ||| ||||||||| || || |||| ||||||||    
T  1091826 ctcaaactatttttgagtttgttcagttcatta 1091858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 3307933 - 3308064
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||| |||||||||||| ||||||||||||||   ||||||| | |||||||||||||||||| || ||| || | | |||| |||||||||||    
T  3307933 ctcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaactaagttctacgagttaattgtcgaatcgagt 3308032  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
      ||||||||| |||| |||||||||||||||    
T  3308033 tccgaactattgtcgagttggttcggttcatt 3308064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 97 - 233
Target Start/End: Complemental strand, 27189227 - 27189091
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||||| ||||| ||| ||  |||||||||||||||  ||||||| ||||||||||||||||||||||| ||| || ||||||||||||||||    
T  27189227 ataactcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcgacgaatcaattatcgaatc 27189128  T
Q  197 gagtctcgaactattttcgaattggttcggttcatta 233  Q
     | |  |||||| |  |||| ||| ||||||||||||    
T  27189127 taattacgaactctaatcgagttgattcggttcatta 27189091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 39478089 - 39478180
Alignment:
Q  141 ttcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    ||||||||  |||||||||||||||||||||| | |||  || ||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  39478089 ttcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcatt 39478180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 23181178 - 23181253
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||||||||| || |||||||| |||||||||||    
T  23181178 cgaacttaattttcagttcaagttcggctcatttggttcatgaaccaaattcgacgaatcaattgtcgaatcgagt 23181253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 12378392 - 12378482
Alignment:
Q  142 tcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    |||||||  ||||||||||||| |||||||| |||||| |||||||||||||| ||| ||||| |||||||| || || ||||||||||||    
T  12378392 tcaagttcaactcatttggttcgtgaaccaagttcaacgaatcaattatcgaaccgaatctcggactatttttgagtttgttcggttcatt 12378482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 453482 - 453613
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    ||||||||| ||||||||| ||| |||||||||||||||| ||||||    ||| || |||||||||||||| ||||||  || |  |||||| |||| |    
T  453482 ctcaagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 453581  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  453582 gtcgaactataatcgagttggttcggttcatt 453613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 22564006 - 22564133
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    |||||||||  ||||| ||||  ||| |||||||||||| ||||||| || | |||||||||||||||||| |||||| || |||||| |||||| | |     
T  22564006 tcaagttcggttcattcatttgacgagcttaattttcaactcaagttcgatttatttggttcatgaaccaagttcaacgaaacaattaccgaatcaaatt 22564105  T
Q  202 tcgaactattttcgaattggttcggttc 229  Q
    || || ||||||||| |||| |||||||    
T  22564106 tcaaattattttcgagttggatcggttc 22564133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 43967505 - 43967587
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaac 179  Q
    ||||||||||||| ||||||||| ||| |||||||||| || |  ||||||| | ||| ||||||||||||||||||||||||    
T  43967505 ataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaaattcaac 43967587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 32740663 - 32740771
Alignment:
Q  126 gaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcg 225  Q
    ||||||| |||||| ||||||||    ||||||||||||||||||||||||||  | | |||| |||||| ||||  | ||||||| |||| ||||||||    
T  32740663 gaacttatttttcagttcaagttcagttcatttggttcatgaaccaaattcaatgagttaattgtcgaattgagttccaaactattgtcgagttggttcg 32740762  T
Q  226 gttcattat 234  Q
    |||||||||    
T  32740763 gttcattat 32740771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 34655030 - 34655165
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 196  Q
    ||||||||||||  ||||||||| ||| | |||||||| || |  ||||||| ||||| |||||||||||||| || |||||||||  ||||| ||| ||    
T  34655030 ataactcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaattaccgagtc 34655129  T
Q  197 gagtctcgaactattttcgaattggttcggttcatt 232  Q
    ||||  |||||| | ||||| |||  ||||||||||    
T  34655130 gagttccgaactttattcgagttgtatcggttcatt 34655165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 33280067 - 33279981
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttcggttcattatcagc 238  Q
    ||||||||||||||||||||| ||| || |||||||||||||||| | |  |||||| |  |||| ||||||||||||||| |||||    
T  33280067 ctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcaaattacgaactttaatcgagttggttcggttcattgtcagc 33279981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 232
Target Start/End: Complemental strand, 9412678 - 9412534
Alignment:
Q  88 gaatgatacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaat 187  Q
    |||| ||| ||||||||| |||  ||||||||| || |||| |||||| |||| |||||||   ||||||||||||||||||||| |||||| | |  ||    
T  9412678 gaattatatataactcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaaccaagttcaacgagttcat 9412579  T
Q  188 tatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
    | |||| |||||   | ||||||  |||| |||||||||||||||    
T  9412578 tgtcgagtcgagctccaaactataatcgagttggttcggttcatt 9412534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 11161571 - 11161702
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| ||||||  || || |||||| |||| |    
T  11161571 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 11161670  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  || | |||||| ||||||||    
T  11161671 gtcgaactataatcaagttggtttggttcatt 11161702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 34516161 - 34516268
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactattttcgaattggttc 224  Q
    |||||||||||||||  ||||||| | ||||||||||| ||||| ||| |||||  |||||||| |||||| || |  |||||| |  | || |||||||    
T  34516161 cgaacttaattttcagctcaagttcggctcatttggttgatgaatcaagttcaatgaatcaattgtcgaattgaattacgaactttaattgagttggttc 34516260  T
Q  225 ggttcatt 232  Q
    ||||||||    
T  34516261 ggttcatt 34516268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 43955926 - 43955884
Alignment:
Q  152 ctcatttggttcatgaaccaaattcaacaaatcaattatcgaa 194  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||    
T  43955926 ctcatttggttcatgaaccaaattaaacgaattaattatcgaa 43955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 7448 - 7318
Alignment:
Q  102 tcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtc 201  Q
    ||||||||  |||| ||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||| ||| || |||||||||||||||||| |     
T  7448 tcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatt 7349  T
Q  202 tcgaactattttcgaattggttcggttcatt 232  Q
     |||||  |  ||||||||||||||||||||    
T  7348 acgaacactaatcgaattggttcggttcatt 7318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 237
Target Start/End: Original strand, 96273 - 96415
Alignment:
Q  95 acataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaa 194  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||| || | ||||| ||||||||||||||| |||  || |||||  ||| | ||| ||||    
T  96273 acataactcaagttcaactcatttatttaacgagcttaattttgaacttaagttggactcatttggttcacgaattaagttcaatgaattatttaacgaa 96372  T
Q  195 tcgagtctcgaactattttcgaattggttcggttcattatcag 237  Q
     ||| |||||||||||||||||  | |||||||||||| ||||    
T  96373 ccgaatctcgaactattttcgagctagttcggttcattgtcag 96415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 232
Target Start/End: Complemental strand, 51449 - 51312
Alignment:
Q  95 acataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaa 194  Q
    |||||| |||||||| ||||||||||||| | | ||||||||| || ||| ||| ||||||||||||||| |||| || |||||| ||| | ||| ||||    
T  51449 acataattcaagttcaactcatttatttaacaagcttaattttaaaatcacgttcgactcatttggttcacgaactaagttcaacgaattatttaccgaa 51350  T
Q  195 tcgagtctcgaactattttcgaattggttcggttcatt 232  Q
     ||| |||||||||||||||||  | ||||||||||||    
T  51349 ccgaatctcgaactattttcgagctagttcggttcatt 51312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 232
Target Start/End: Complemental strand, 921 - 789
Alignment:
Q  88 gaatgatacataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaat 187  Q
    |||| |||| || ||||||||| ||||||||||||| ||| ||||||||||||  ||| ||  |||||||||||||||||||||| |||||             
T  921 gaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaa--------- 831  T
Q  188 tatcgaatcgagtctcgaactattttcgaattggttcggttcatt 232  Q
       ||||||||||||| ||||||||||||||||||||||||||||    
T  830 ---cgaatcgagtctcaaactattttcgaattggttcggttcatt 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 26738 - 26665
Alignment:
Q  125 cgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcga 198  Q
    |||||||||||||||  ||||||| |||||||||| |||||||||||| |||||||||||| || |||||||||    
T  26738 cgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcga 26665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 237
Target Start/End: Original strand, 11392 - 11525
Alignment:
Q  104 aagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctc 203  Q
    ||||||| |||||||||||| ||||||||||||| || | |||||   |||||||||||||||||| || ||| || |   |||| |||||||||||  |    
T  11392 aagttcggctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttcc 11491  T
Q  204 gaactattttcgaattggttcggttcattatcag 237  Q
     ||||||| |||| ||||||||||||||| ||||    
T  11492 aaactattatcgagttggttcggttcattgtcag 11525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 124611 - 124491
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| | ||||||||  |||  ||||||| ||||||||||||||||||||||| |||||   | ||||| |||| || | | |||||||||     
T  124611 ctcatttaattaacaaacttaataatcagctcaagttcgactcatttggttcatgaaccaagttcaatggaccaattgtcgagtcaaatttcgaactata 124512  T
Q  212 ttcgaattggttcggttcatt 232  Q
    ||||| |||||||||||||||    
T  124511 ttcgagttggttcggttcatt 124491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 17228 - 17297
Alignment:
Q  95 acataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttca 164  Q
    ||||||||  ||||| ||||||||||||| ||| ||||||||| |||||||| | |||||||||||||||    
T  17228 acataactttagttcaactcatttatttaacgagcttaattttgaattcaagctcgactcatttggttca 17297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 9999 - 10119
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| |||||||||||||||  | ||||| | |||||||||| |||||| |||||||||| ||| |||| |||| || | | |  ||||||     
T  9999 ctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaactata 10098  T
Q  212 ttcgaattggttcggttcatt 232  Q
    ||||| ||| |||||||||||    
T  10099 ttcgagttgattcggttcatt 10119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 11479 - 11599
Alignment:
Q  112 ctcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagtctcgaactatt 211  Q
    |||||||| ||| |||||||||||||||  | ||||| | ||||||||||  ||||| ||| |||||| ||| ||||||||| || | | |  ||||||     
T  11479 ctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcgagtcaaattttaaactatg 11578  T
Q  212 ttcgaattggttcggttcatt 232  Q
    ||||| |||||||||||||||    
T  11579 ttcgagttggttcggttcatt 11599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 329 - 254
Alignment:
Q  97 ataactcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaa 172  Q
    ||||||||||||| ||||||||| ||| ||||||||||| | || ||||||| | || ||| ||||||||||||||    
T  329 ataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaa 254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 19295 - 19426
Alignment:
Q  101 ctcaagttcgactcatttatttagcgaacttaattttcaattcaagtttgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcgagt 200  Q
    |||||||||  |||||||| ||| |||||||||||||||  ||||||    ||| || |||||||||||||| |||||   || |  |||||| |||| |    
T  19295 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaaaggattagatatcgagtcgaat 19394  T
Q  201 ctcgaactattttcgaattggttcggttcatt 232  Q
     |||||||||  |||| |||||||||||||||    
T  19395 gtcgaactataatcgagttggttcggttcatt 19426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University