View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19030_high_5 (Length: 677)

Name: NF19030_high_5
Description: NF19030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19030_high_5
NF19030_high_5
[»] chr5 (3 HSPs)
chr5 (17-578)||(2394126-2394709)
chr5 (516-618)||(43379444-43379546)
chr5 (516-609)||(43378579-43378672)
[»] chr8 (6 HSPs)
chr8 (516-663)||(28584299-28584446)
chr8 (516-608)||(39308675-39308767)
chr8 (516-608)||(39309638-39309730)
chr8 (511-612)||(13017749-13017850)
chr8 (569-618)||(42578769-42578818)
chr8 (558-590)||(3572145-3572177)
[»] chr6 (3 HSPs)
chr6 (511-593)||(18065721-18065803)
chr6 (557-613)||(13207394-13207450)
chr6 (567-618)||(10838150-10838202)
[»] chr3 (6 HSPs)
chr3 (511-593)||(34936717-34936799)
chr3 (516-618)||(39232258-39232360)
chr3 (537-631)||(17057131-17057224)
chr3 (538-618)||(39229431-39229511)
chr3 (563-637)||(1772921-1772994)
chr3 (567-634)||(7267432-7267499)
[»] chr7 (7 HSPs)
chr7 (569-639)||(35753004-35753073)
chr7 (516-615)||(18332809-18332908)
chr7 (537-631)||(43492967-43493060)
chr7 (557-613)||(42253041-42253096)
chr7 (536-631)||(41347118-41347212)
chr7 (569-618)||(25871763-25871812)
chr7 (516-608)||(48204046-48204138)
[»] chr2 (2 HSPs)
chr2 (516-609)||(34229043-34229136)
chr2 (567-631)||(10148561-10148624)
[»] scaffold0151 (1 HSPs)
scaffold0151 (561-624)||(20792-20855)
[»] chr4 (3 HSPs)
chr4 (561-609)||(24484835-24484883)
chr4 (516-609)||(39310403-39310496)
chr4 (567-618)||(32158857-32158909)
[»] chr1 (1 HSPs)
chr1 (511-612)||(46178127-46178228)


Alignment Details
Target: chr5 (Bit Score: 432; Significance: 0; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 17 - 578
Target Start/End: Original strand, 2394126 - 2394709
Alignment:
Q  17 ttaattaatttaataacatttgcacattaaaatgaaacaacaaaaatacataatagaaaaggtacaatataagaaaatggttattattaggacttggagt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2394126 ttaattaatttaataacatttgcacattaaaatgaaacaacaaaaatacataatagaaaaggtacaatataagaaaatggttattattaggacttggagt 2394225  T
Q  117 agtcttttgtaattgttttcatttgcagactgaagcgtagagaacactgtccttccttaattatactagctttttgaggaacttcccggaagttgcttcc 216  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    |||||||||||||||||||||||| ||||||||||||||||||    
T  2394226 agtcttttgtaactgttttcatttgcagacggaagcgtagagaacactgtcct----taattatactagctttttgaggaatttcccggaagttgcttcc 2394321  T
Q  217 aatccagcaacttttgtcgttctaaattacgatggaattataatgatacaaaagtcagagcgtacaaatgtatgaaacttcgcaaatatactaatatact 316  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2394322 aatccaacaacttttgtcgttctaaattacgatggaattataatgatacaaaagtcagagcgtacaaatgtatgaaacttcgcaaatatactaatatact 2394421  T
Q  317 gctccgaatgcgaaggcttggaaagatag-----------------cttccgatagactatttccaaacaaaaagagtaaaaaatagcttattggaaatt 399  Q
    | ||||||||| |||||||||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2394422 gttccgaatgcaaaggcttggaaagatagcttatcggaagcgataacttccgatagactatttccaaacaaaaagagtaaaaaatagcttattggaaatt 2394521  T
Q  400 atcttccgataaagactggcttcagagcaacactggagagagcaattttcaaatgtttcagcttaaaacattccgtatgtgacatgtttcagcaattttc 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2394522 atcttccgataaagactggcttcagagcaacactggagagagcaattttcaaatgtttcagcttaaaacattccgtatgtgacatgtttcagcaattttc 2394621  T
Q  500 -------aattttc---ccgggtgcgtctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtgg 578  Q
           |||||||   ||||  | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2394622 aacttttaattttcattccggaggtgt-tttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtgg 2394709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 618
Target Start/End: Complemental strand, 43379546 - 43379444
Alignment:
Q  516 tctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaagatttag 615  Q
    ||||||||||||||| ||   |||||||||||||  |    ||||||||| ||||||||||||||||||||||| ||||||  | ||||||||| ||| |    
T  43379546 tctttgctccatttatgaaggctccatttatcccattccagctcttagatgtgtgacatgtggcaaaaataaaagcaagggttgggattaaaaggtttgg 43379447  T
Q  616 aaa 618  Q
    |||    
T  43379446 aaa 43379444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 609
Target Start/End: Original strand, 43378579 - 43378672
Alignment:
Q  516 tctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaag 609  Q
    ||||||||||||||| ||   ||||||||| |||  | |  ||||||||| ||||||| ||||||||||||||| ||||||  |||||||||||    
T  43378579 tctttgctccatttatgaaggctccatttaccccattctagctcttagatgtgtgacacgtggcaaaaataaaagcaagggttgagattaaaag 43378672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 3e-68; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 516 - 663
Target Start/End: Complemental strand, 28584446 - 28584299
Alignment:
Q  516 tctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaagatttag 615  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  28584446 tctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacacgtggcaaaaataaaaccaagggccgagattaaaagatttat 28584347  T
Q  616 aaacaaacacttgttttataaataagaaaagtcatgcgagtttcatct 663  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  28584346 aaacaaacacttgttttataaataagaaaagtcatgcgcatttcatct 28584299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 608
Target Start/End: Original strand, 39308675 - 39308767
Alignment:
Q  516 tctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaa 608  Q
    ||||||||||||||| || |||||||||||||||| ||  |||| |||||   ||||||||||||||| |||||  |||||| | ||||||||    
T  39308675 tctttgctccatttaggaaacctccatttatcccttttcacctcatagatgactgacatgtggcaaaactaaaatgaagggctgggattaaaa 39308767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 608
Target Start/End: Complemental strand, 39309730 - 39309638
Alignment:
Q  516 tctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaa 608  Q
    ||||||||||||||| || |||||||||||||||| ||  |||| |||||   |||||||||||||||  ||||  |||||| ||||||||||    
T  39309730 tctttgctccatttaggaaacctccatttatcccttttcacctcatagatgattgacatgtggcaaaacaaaaatgaagggctgagattaaaa 39309638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 612
Target Start/End: Complemental strand, 13017850 - 13017749
Alignment:
Q  511 gtgcgtctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaaga 610  Q
    |||| ||||||||||||||| |||| |||||||||  ||||||  |  | ||||| | |||||||||||||||| |||| ||| |||  |||||||||||    
T  13017850 gtgcatctttgctccatttatgagagctccatttacacctgttcactgcatagatttatgacatgtggcaaaaacaaaatcaaaggctcagattaaaaga 13017751  T
Q  611 tt 612  Q
    ||    
T  13017750 tt 13017749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 618
Target Start/End: Original strand, 42578769 - 42578818
Alignment:
Q  569 tgacatgtggcaaaaataaaaccaagggccgagattaaaagatttagaaa 618  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||| ||||    
T  42578769 tgacatgtggcaaaaataaaatcaatggctgagattaaaagatttggaaa 42578818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 558 - 590
Target Start/End: Complemental strand, 3572177 - 3572145
Alignment:
Q  558 tcttagatatgtgacatgtggcaaaaataaaac 590  Q
    |||||||| ||||||||||||||||||||||||    
T  3572177 tcttagatgtgtgacatgtggcaaaaataaaac 3572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 511 - 593
Target Start/End: Original strand, 18065721 - 18065803
Alignment:
Q  511 gtgcgtctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaa 593  Q
    |||| |||||||||||||||  | |||||||||||||||| ||| | |  ||||||| |||||||||||||||||||||||||    
T  18065721 gtgcatctttgctccatttaccaaacctccatttatccctttttactttatagatatatgacatgtggcaaaaataaaaccaa 18065803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 613
Target Start/End: Original strand, 13207394 - 13207450
Alignment:
Q  557 ctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaagattt 613  Q
    ||||||||| ||||||| ||||||||||||||| ||||||  |||||||||||||||    
T  13207394 ctcttagatgtgtgacacgtggcaaaaataaaagcaagggttgagattaaaagattt 13207450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 567 - 618
Target Start/End: Original strand, 10838150 - 10838202
Alignment:
Q  567 tgtgacatgtggcaa-aaataaaaccaagggccgagattaaaagatttagaaa 618  Q
    ||||||||||||||| ||||||||||||||||  |||||||||  ||||||||    
T  10838150 tgtgacatgtggcaacaaataaaaccaagggctaagattaaaaagtttagaaa 10838202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 511 - 593
Target Start/End: Original strand, 34936717 - 34936799
Alignment:
Q  511 gtgcgtctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaa 593  Q
    |||| |||||||||||||||  | |||||||||||||||| ||  | || ||||| |||||||||||||||||||||||||||    
T  34936717 gtgcatctttgctccatttaccatacctccatttatcccttttcacttcatagatttgtgacatgtggcaaaaataaaaccaa 34936799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 618
Target Start/End: Complemental strand, 39232360 - 39232258
Alignment:
Q  516 tctttgctccatttaagaga-cctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaagattta 614  Q
    ||||||||||||||| |||| ||||||||||  ||| ||| | |||| ||| |||||||||| || |||||| |||||| ||||||||||||||| ||||    
T  39232360 tctttgctccattta-gagagcctccatttactcctttttacttcttggatgtgtgacatgttgctaaaatagaaccaaaggccgagattaaaaggttta 39232262  T
Q  615 gaaa 618  Q
    ||||    
T  39232261 gaaa 39232258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 537 - 631
Target Start/End: Original strand, 17057131 - 17057224
Alignment:
Q  537 ctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaagatttagaaacaaacacttgttt 631  Q
    ||||||||| |||||||  | |||||||| ||||||| ||||||||||| ||||||| ||  ||||||||||| ||| |||| ||||||||||||    
T  17057131 ctccatttacccctgttcacttcttagatgtgtgacacgtggcaaaaatgaaaccaacggttgagattaaaaggtttggaaa-aaacacttgttt 17057224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 538 - 618
Target Start/End: Original strand, 39229431 - 39229511
Alignment:
Q  538 tccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaagatttagaaa 618  Q
    ||||||||  ||| ||||| |||| ||| ||||||||||||| |||||| |||||| | | ||||||||||| ||||||||    
T  39229431 tccatttactcctttttgcttctttgatgtgtgacatgtggctaaaatagaaccaaagactgagattaaaaggtttagaaa 39229511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 563 - 637
Target Start/End: Original strand, 1772921 - 1772994
Alignment:
Q  563 gatatgtgacatgtggcaaaa-ataaaaccaagggccgagattaaaagatttagaaacaaacacttgttttataaa 637  Q
    ||||||||||||||||||||| | |||||||||||  | ||||||||| ||  |||| || |||||||||||||||    
T  1772921 gatatgtgacatgtggcaaaatagaaaaccaagggttgggattaaaaggtt--gaaaaaagcacttgttttataaa 1772994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 567 - 634
Target Start/End: Complemental strand, 7267499 - 7267432
Alignment:
Q  567 tgtgacatgtggcaaaa-ataaaaccaagggccgagattaaaagatttagaaacaaacacttgttttat 634  Q
    ||||||||||||||||| | |||||||| ||| |||||||||||  || |||| |||||||||||||||    
T  7267499 tgtgacatgtggcaaaatagaaaaccaaaggctgagattaaaagggttggaaa-aaacacttgttttat 7267432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 569 - 639
Target Start/End: Complemental strand, 35753073 - 35753004
Alignment:
Q  569 tgacatgtggcaaaaataaaaccaagggccgagattaaaagatttagaaacaaacacttgttttataaata 639  Q
    ||||||||||||||||||||| ||| ||| | ||||||||||||| |||| |||||||||||| |||||||    
T  35753073 tgacatgtggcaaaaataaaatcaatggctgtgattaaaagatttggaaa-aaacacttgtttgataaata 35753004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 615
Target Start/End: Complemental strand, 18332908 - 18332809
Alignment:
Q  516 tctttgctccatttaagaga-cctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaagattta 614  Q
    ||||||||||||||| |||| ||||||||||  | | ||||| |||| ||| ||||||||||||| |||||| |||||| | ||||||||||||| ||||    
T  18332908 tctttgctccattta-gagaacctccatttactcttttttgcttcttggatgtgtgacatgtggctaaaatagaaccaaagaccgagattaaaaggttta 18332810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 537 - 631
Target Start/End: Complemental strand, 43493060 - 43492967
Alignment:
Q  537 ctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaagatttagaaacaaacacttgttt 631  Q
    ||||||||| |||||||  | |||||||| |||||||  |||||||||| ||||||| ||  ||||||||||| ||| |||| ||||||||||||    
T  43493060 ctccatttacccctgttcacttcttagatgtgtgacacatggcaaaaatgaaaccaacggttgagattaaaaggtttggaaa-aaacacttgttt 43492967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 613
Target Start/End: Complemental strand, 42253096 - 42253041
Alignment:
Q  557 ctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaagattt 613  Q
    ||||||||| |||||||| || ||||||||||| ||||||| |||||||||||||||    
T  42253096 ctcttagatgtgtgacat-tgtcaaaaataaaaacaagggctgagattaaaagattt 42253041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 631
Target Start/End: Original strand, 41347118 - 41347212
Alignment:
Q  536 cctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaagatttagaaacaaacacttgttt 631  Q
    |||||||||||||||||||   |  ||||| | |||||||||||||| || ||| ||||||| |||||||||| ||||| | | ||||||||||||    
T  41347118 cctccatttatccctgtttattttgtagatgtctgacatgtggcaaatattaaatcaagggctgagattaaaaaattta-acataaacacttgttt 41347212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 569 - 618
Target Start/End: Original strand, 25871763 - 25871812
Alignment:
Q  569 tgacatgtggcaaaaataaaaccaagggccgagattaaaagatttagaaa 618  Q
    |||||||||||||||||||||  |||||  | ||||||||||||||||||    
T  25871763 tgacatgtggcaaaaataaaattaagggttgggattaaaagatttagaaa 25871812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 516 - 608
Target Start/End: Complemental strand, 48204138 - 48204046
Alignment:
Q  516 tctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaa 608  Q
    ||||||||| ||||||||   |||||||| ||||| ||  |||| ||||||  ||||||||||||||| |||||  |||||  ||||||||||    
T  48204138 tctttgctcaatttaagaaggctccatttttcccttttcacctcatagataactgacatgtggcaaaattaaaattaagggttgagattaaaa 48204046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 609
Target Start/End: Complemental strand, 34229136 - 34229043
Alignment:
Q  516 tctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaag 609  Q
    ||||||||||||||||||  |||| ||||| |||  |||   || ||||| |||||||||||| |||||||||||||| ||| |||||||||||    
T  34229136 tctttgctccatttaagattcctcaatttaccccattttaagtcatagatgtgtgacatgtggaaaaaataaaaccaatggctgagattaaaag 34229043  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 10148624 - 10148561
Alignment:
Q  567 tgtgacatgtggcaaaaataaaaccaagggccgagattaaaagatttagaaacaaacacttgttt 631  Q
    |||||||||||| |||||||||| ||||||  ||||||||||  ||| |||| ||||||||||||    
T  10148624 tgtgacatgtggtaaaaataaaatcaagggttgagattaaaaagtttggaaa-aaacacttgttt 10148561  T

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Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 624
Target Start/End: Original strand, 20792 - 20855
Alignment:
Q  561 tagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaagatttagaaacaaaca 624  Q
    ||||| |||||||||||| |||||||||||||| ||| ||||||||||| ||| |||| |||||    
T  20792 tagatgtgtgacatgtggtaaaaataaaaccaatggctgagattaaaaggtttggaaaaaaaca 20855  T

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Target: chr4 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 609
Target Start/End: Original strand, 24484835 - 24484883
Alignment:
Q  561 tagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaag 609  Q
    ||||| |||||||||||| |||||||||||||| ||| |||||||||||    
T  24484835 tagatgtgtgacatgtggaaaaaataaaaccaatggctgagattaaaag 24484883  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 609
Target Start/End: Original strand, 39310403 - 39310496
Alignment:
Q  516 tctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaag 609  Q
    ||||||||||||||||||  |||| |||||||||  ||    |  ||||| | |||||||||| |||||||||||||| ||| |||||||||||    
T  39310403 tctttgctccatttaagattcctcaatttatcccatttcaagttatagatgtatgacatgtggaaaaaataaaaccaatggctgagattaaaag 39310496  T

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Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 567 - 618
Target Start/End: Original strand, 32158857 - 32158909
Alignment:
Q  567 tgtgacatgtggcaaaaat-aaaaccaagggccgagattaaaagatttagaaa 618  Q
    |||||||||| |||||| | |||||||||||| ||||||||||| ||||||||    
T  32158857 tgtgacatgtagcaaaagttaaaaccaagggcagagattaaaaggtttagaaa 32158909  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 612
Target Start/End: Complemental strand, 46178228 - 46178127
Alignment:
Q  511 gtgcgtctttgctccatttaagagacctccatttatccctgtttgcctcttagatatgtgacatgtggcaaaaataaaaccaagggccgagattaaaaga 610  Q
    |||| ||||||||||||||| |||| |||||||||  ||||||  |  | ||||| | ||||| |||||||||| |||| ||| |||  |||||||||||    
T  46178228 gtgcatctttgctccatttatgagagctccatttacacctgttcactgcatagatttatgacacgtggcaaaaacaaaatcaaaggctcagattaaaaga 46178129  T
Q  611 tt 612  Q
    ||    
T  46178128 tt 46178127  T

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