View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19030_low_3 (Length: 694)

Name: NF19030_low_3
Description: NF19030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19030_low_3
NF19030_low_3
[»] chr6 (19 HSPs)
chr6 (20-683)||(5692260-5692926)
chr6 (510-683)||(5174244-5174417)
chr6 (544-683)||(5275990-5276129)
chr6 (478-612)||(5276130-5276264)
chr6 (490-684)||(5380466-5380663)
chr6 (178-297)||(5356816-5356935)
chr6 (178-297)||(5423436-5423555)
chr6 (607-686)||(5107707-5107786)
chr6 (573-668)||(5149595-5149690)
chr6 (178-234)||(5069271-5069327)
chr6 (160-252)||(5134087-5134179)
chr6 (166-242)||(5174610-5174686)
chr6 (178-249)||(5105072-5105143)
chr6 (178-305)||(5149156-5149283)
chr6 (178-298)||(5341382-5341502)
chr6 (178-242)||(5368198-5368262)
chr6 (573-684)||(5093035-5093146)
chr6 (573-684)||(5160391-5160502)
chr6 (580-659)||(5340679-5340758)
[»] chr4 (5 HSPs)
chr4 (178-296)||(25567613-25567731)
chr4 (178-298)||(4342630-4342750)
chr4 (178-297)||(4358099-4358218)
chr4 (178-298)||(4333240-4333360)
chr4 (178-298)||(4135738-4135858)


Alignment Details
Target: chr6 (Bit Score: 573; Significance: 0; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 573; E-Value: 0
Query Start/End: Original strand, 20 - 683
Target Start/End: Original strand, 5692260 - 5692926
Alignment:
Q  20 cctattagtcgaacattattagattgttggatgtcnnnnnnn-gtagggatgattgttggatgtctggcaggtgaagtatatcttcaaaatattcaaagt 118  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5692260 cctattagtcgaacattattagattgttggatgtcttttttttgtagggatgattgttggatgtctggcaggtgaagtatatcttcaaaatattcaaagt 5692359  T
Q  119 ctatatcttctgaatattcaaagcctacatcttgctgtatttctttatctaacaattgcatcatatcttgcactcgaggttcaactcccactgaatgatt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5692360 ctatatcttctgaatattcaaagcctacatcttgctgtatttctttatctaacaattgcatcatatcttgcactcgaggttcaactcccactgaatgatt 5692459  T
Q  219 agcaacaaacaagtctttcttgtctagcaaacgcacaacttttttgacaatatctcttatagcctcactttcgttcctatttcaaaaacaaccaaaagag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5692460 agcaacaaacaagtctttcttgtctagcaaacgcacaacttttttgacaatatcttttatagcctcactttcgttcctatttcaaaaacaaccaaaagag 5692559  T
Q  319 aggattaatgattggataagaaannnnnnn--tcnnnnnnnattgcaaaatggggcaaagttagaggacaaaaatgttgttttattaatcgggggcaaaa 416  Q
    ||||||||||||||||||||||          ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5692560 aggattaatgattggataagaacccccccccctctttttttattgcaaaatggggcaaagttagaggacaaaaatgttgttttattaatcgggggcaaaa 5692659  T
Q  417 ttataattttaacaaatttagggaaccaaaaatgagtttaagcctctgaatgattgcaatagttgaatgaaactacctgaaatttggaactacaaagcca 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5692660 ttataattttaacaaatttagggaaccaaaaatgagtttaagcctctgaatgattgcaatagttgaatgaaactacctgaaatttggaactacaaagcca 5692759  T
Q  517 gcaagcccagcaacctcactaagcgcgtctctccatttcagcgacttgtctgtcttctttgaaattctgctcaagagactttggaacgcttttccaaact 616  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5692760 gcaagcccagcaacctcactaagcgcgtctctccatttcagcgacttgtctgtcttctttgaaattctgctcaagagactttggaacgcttttccaaact 5692859  T
Q  617 cacctgtttggtgtcgtacatctgaaggatcaacatcatagaacaccggcaacactatctgtcctat 683  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5692860 cacctgtttggtgtcgtacatctgaaggatcaacatcatagaacaccggcaacactatctgccctat 5692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 510 - 683
Target Start/End: Complemental strand, 5174417 - 5174244
Alignment:
Q  510 aaagccagcaagcccagcaacctcactaagcgcgtctctccatttcagcgacttgtctgtcttctttgaaattctgctcaagagactttggaacgctttt 609  Q
    ||||||||||||| ||||| |||||| ||| || |||||||||||||| ||| ||  | |||||||||||||||||||||||||||||||||||||||||    
T  5174417 aaagccagcaagctcagcagcctcacgaagtgcatctctccatttcagggacgtgcttttcttctttgaaattctgctcaagagactttggaacgctttt 5174318  T
Q  610 ccaaactcacctgtttggtgtcgtacatctgaaggatcaacatcatagaacaccggcaacactatctgtcctat 683  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  5174317 ccaaactcacctgtttggtgtcgtacatccgaaggatcaacatcatagaacaccggcaacactatctgccctat 5174244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 544 - 683
Target Start/End: Complemental strand, 5276129 - 5275990
Alignment:
Q  544 tctctccatttcagcgacttgtctgtcttctttgaaattctgctcaagagactttggaacgcttttccaaactcacctgtttggtgtcgtacatctgaag 643  Q
    |||||| ||||||| ||| ||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5276129 tctctcaatttcagggacgtgcttttcttctttgaaattctgctcaagagactttggaacgcttttccaaactcacctgtttggtgtcgtacatctgaag 5276030  T
Q  644 gatcaacatcatagaacaccggcaacactatctgtcctat 683  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  5276029 gatcaacatcatagaacaccggcaacactatctgccctat 5275990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 478 - 612
Target Start/End: Complemental strand, 5276264 - 5276130
Alignment:
Q  478 gttgaatgaaactacctgaaatttggaactacaaagccagcaagcccagcaacctcactaagcgcgtctctccatttcagcgacttgtctgtcttctttg 577  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| | |||||||||||| ||| || |||||||||||||| ||  ||  | ||||||||     
T  5276264 gttgaattaaattacctgaaatttggaactacaaagccagcaatctcagcaacctcacgaagtgcatctctccatttcagggatgtgcttttcttcttta 5276165  T
Q  578 aaattctgctcaagagactttggaacgcttttcca 612  Q
    |||||||||||||||||||||||||||||||||||    
T  5276164 aaattctgctcaagagactttggaacgcttttcca 5276130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 490 - 684
Target Start/End: Complemental strand, 5380663 - 5380466
Alignment:
Q  490 tacctgaaatttggaactacaaagccagcaagcccagcaacctcactaagcgcgtctctccatttcagcgacttgtctgtcttcttt---gaaattctgc 586  Q
    |||||| | ||| |||||||||| |||||||   ||||| || ||  ||| || |||||||||||||||| ||| ||| |||||||    |||| | |||    
T  5380663 tacctggagtttagaactacaaatccagcaaaggcagcagccccatgaagagcctctctccatttcagcgtcttatctttcttcttcttcgaaagtttgc 5380564  T
Q  587 tcaagagactttggaacgcttttccaaactcacctgtttggtgtcgtacatctgaaggatcaacatcatagaacaccggcaacactatctgtcctatg 684  Q
    ||||||||||||  || |||| |||||||||||| |||||||| ||||| ||  | ||||||||||||||||||||||| | |||||||||| |||||    
T  5380563 tcaagagactttcaaaagcttgtccaaactcaccagtttggtgacgtacctccaagggatcaacatcatagaacaccggtagcactatctgtgctatg 5380466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 5356816 - 5356935
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtctagcaaacgcacaacttttttgacaatatctctta 277  Q
    |||||||||||||| |||| |||||||||||| | || |||||||||||| |||||| ||||||| ||||||||   ||  ||||| ||||||||  | |    
T  5356816 atcatatcttgcacacgagattcaactcccaccggattattagcaacaaataagtctgtcttgtcaagcaaacgtgtaatatttttaacaatatccttga 5356915  T
Q  278 tagcctcactttcgttccta 297  Q
    |||| |||||||| ||||||    
T  5356916 tagcttcactttcattccta 5356935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 5423555 - 5423436
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtctagcaaacgcacaacttttttgacaatatctctta 277  Q
    ||||||||||||||||||| |||||||||||| | || |||||||| |||||| ||| ||||||| |||  ||||  ||| ||||  ||||||||  | |    
T  5423555 atcatatcttgcactcgagattcaactcccacaggattattagcaataaacaaatctgtcttgtcaagcttacgcgtaacattttcaacaatatccttaa 5423456  T
Q  278 tagcctcactttcgttccta 297  Q
    ||||||||||||| ||||||    
T  5423455 tagcctcactttcattccta 5423436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 686
Target Start/End: Original strand, 5107707 - 5107786
Alignment:
Q  607 tttccaaactcacctgtttggtgtcgtacatctgaaggatcaacatcatagaacaccggcaacactatctgtcctatgct 686  Q
    |||||||||||||| ||||| || ||||| ||||| ||||||||||||||||||||||| | ||| | ||| ||||||||    
T  5107707 tttccaaactcaccagtttgatgacgtacttctgagggatcaacatcatagaacaccggaagcaccacctgccctatgct 5107786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 573 - 668
Target Start/End: Original strand, 5149595 - 5149690
Alignment:
Q  573 ctttgaaattctgctcaagagactttggaacgcttttccaaactcacctgtttggtgtcgtacatctgaaggatcaacatcatagaacaccggcaa 668  Q
    ||||||||||||  ||||||||||||| || ||||| |||||||||| ||||||||| ||||| ||  | ||||| |||||||| ||||| |||||    
T  5149595 ctttgaaattctattcaagagactttgaaatgctttgccaaactcacttgtttggtgacgtacttcacatggatctacatcataaaacactggcaa 5149690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 5069271 - 5069327
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtct 234  Q
    |||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||    
T  5069271 atcatatcctgcactcgagattcaactcccactggattattagcaataaacaagtct 5069327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 5134087 - 5134179
Alignment:
Q  160 tctttatctaacaattgcatcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtctagcaaacgc 252  Q
    ||||| |||| |||||| ||||||||| |||  |||| |||||||||||||| || |||||||| |||||| ||| | ||||| |||||||||    
T  5134087 tctttgtctagcaattgaatcatatctagcatacgagattcaactcccactggattattagcaataaacaaatctattttgtcaagcaaacgc 5134179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 5174686 - 5174610
Alignment:
Q  166 tctaacaattgcatcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtc 242  Q
    |||| |||||| ||||||||||||||||||| ||| | |||||| | || || |||||||||||||||| |||||||    
T  5174686 tctagcaattgaatcatatcttgcactcgagattcgagtcccaccggattatcagcaacaaacaagtctgtcttgtc 5174610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 5105072 - 5105143
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtctagcaaa 249  Q
    ||||||||||| ||||||| |||||||||||| | || |||||||| |||||| ||| ||||||| ||||||    
T  5105072 atcatatcttgaactcgagattcaactcccaccggattattagcaataaacaaatctgtcttgtcaagcaaa 5105143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 305
Target Start/End: Original strand, 5149156 - 5149283
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtctagcaaacgcacaacttttttgacaatatctctta 277  Q
    ||||||||||| ||||||| ||||||||| |||| || || |||||| ||||||||  |||||||||||||  |   ||||||||  |||||||  || |    
T  5149156 atcatatcttgtactcgagtttcaactccgactggattatgagcaacgaacaagtcggtcttgtctagcaagtgagtaactttttcaacaatattcctga 5149255  T
Q  278 tagcctcactttcgttcctatttcaaaa 305  Q
    |   ||||||||||||||||||| ||||    
T  5149256 tgatctcactttcgttcctatttaaaaa 5149283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 298
Target Start/End: Complemental strand, 5341502 - 5341382
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtctagcaaacgcacaacttttttgacaatatctctta 277  Q
    ||||||||||||| ||| | |||||| ||| ||| || || | |||||||||||||| ||||||  ||||| |||  |||||||| ||| |||||  | |    
T  5341502 atcatatcttgcaatcgggattcaacccccgctggattatcaacaacaaacaagtctgtcttgttaagcaagcgcgtaactttttcgacgatatccttga 5341403  T
Q  278 tagcctcactttcgttcctat 298  Q
    ||||||| ||||| |||||||    
T  5341402 tagcctcgctttcattcctat 5341382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 5368262 - 5368198
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtc 242  Q
    |||||| |||||||||||| |||||||||||||| || || ||||| |||||| ||| |||||||    
T  5368262 atcataccttgcactcgagattcaactcccactggattatcagcaataaacaattctgtcttgtc 5368198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 684
Target Start/End: Complemental strand, 5093146 - 5093035
Alignment:
Q  573 ctttgaaattctgctcaagagactttggaacgcttttccaaactcacctgtttggtgtcgtacatctgaaggatcaacatcatagaacaccggcaacact 672  Q
    ||||||||||||  | |||||| |||| || ||||| |||||||| ||| | ||||| ||||| || || ||||| ||||| |||||||| ||||  |||    
T  5093146 ctttgaaattctatttaagagattttgaaatgctttaccaaactcgcctttctggtgacgtacttcagagggatctacatcgtagaacactggcacaact 5093047  T
Q  673 atctgtcctatg 684  Q
    ||||| ||||||    
T  5093046 atctgccctatg 5093035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 684
Target Start/End: Original strand, 5160391 - 5160502
Alignment:
Q  573 ctttgaaattctgctcaagagactttggaacgcttttccaaactcacctgtttggtgtcgtacatctgaaggatcaacatcatagaacaccggcaacact 672  Q
    ||||||||||||  | |||||| |||| || ||||| |||||||  ||| | ||||| ||||| || || ||||| ||||| |||||||| ||||| |||    
T  5160391 ctttgaaattctatttaagagattttgaaatgctttaccaaacttgcctttctggtgacgtacttcagagggatctacatcgtagaacactggcaaaact 5160490  T
Q  673 atctgtcctatg 684  Q
    ||||| ||||||    
T  5160491 atctgccctatg 5160502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 659
Target Start/End: Complemental strand, 5340758 - 5340679
Alignment:
Q  580 attctgctcaagagactttggaacgcttttccaaactcacctgtttggtgtcgtacatctgaaggatcaacatcatagaa 659  Q
    |||||| |||| ||| |||| || |||||||||||||| |||||||| || ||||  ||||| ||||||||||| |||||    
T  5340758 attctgttcaaaagattttgaaatgcttttccaaactctcctgtttgatgacgtatttctgagggatcaacatcgtagaa 5340679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 25567731 - 25567613
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtctagcaaacgcacaacttttttgacaatatctctta 277  Q
    ||||||| || ||||||||||||||||||||||| || ||||||||||| ||||| | ||||||||||||||||||| | |||||  ||||||||  | |    
T  25567731 atcatattttccactcgaggttcaactcccactggattattagcaacaagcaagtgtgtcttgtctagcaaacgcacgattttttcaacaatatccttga 25567632  T
Q  278 tagcctcactttcgttcct 296  Q
    ||||||||||||| |||||    
T  25567631 tagcctcactttcattcct 25567613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 298
Target Start/End: Complemental strand, 4342750 - 4342630
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtctagcaaacgcacaacttttttgacaatatctctta 277  Q
    |||||||||||||||||||  || ||||| || | || || |||||  ||||||||| ||||||| |||||||| | ||| ||||  ||||||||| | |    
T  4342750 atcatatcttgcactcgagaatcgactccgaccggataatcagcaatgaacaagtctgtcttgtcaagcaaacgtataacattttcaacaatatctttga 4342651  T
Q  278 tagcctcactttcgttcctat 298  Q
    || |||||||||| |||||||    
T  4342650 taacctcactttcattcctat 4342630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 4358218 - 4358099
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtctagcaaacgcacaacttttttgacaatatctctta 277  Q
    |||||||||||||||||||  || ||||| |||| || || |||||  ||||||||| ||||||| ||||||||   ||| ||||  |||||||| || |    
T  4358218 atcatatcttgcactcgagaatcgactcctactggattatcagcaatgaacaagtctgtcttgtcaagcaaacgagtaacattttcaacaatatccctga 4358119  T
Q  278 tagcctcactttcgttccta 297  Q
    || |||||||||| ||||||    
T  4358118 taacctcactttcattccta 4358099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 298
Target Start/End: Complemental strand, 4333360 - 4333240
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtctagcaaacgcacaacttttttgacaatatctctta 277  Q
    ||||||||||| ||||||| ||| ||||| || | ||||| |||||  ||||||||  ||||||| ||||||||  |||| ||||  ||||||||  | |    
T  4333360 atcatatcttgtactcgagattcgactcctaccggatgatcagcaatgaacaagtcagtcttgtcaagcaaacgtgcaacattttcaacaatatccttga 4333261  T
Q  278 tagcctcactttcgttcctat 298  Q
    |  ||||||||||||||||||    
T  4333260 tgacctcactttcgttcctat 4333240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 298
Target Start/End: Original strand, 4135738 - 4135858
Alignment:
Q  178 atcatatcttgcactcgaggttcaactcccactgaatgattagcaacaaacaagtctttcttgtctagcaaacgcacaacttttttgacaatatctctta 277  Q
    ||||||||| ||||||||| ||| ||||  |||| ||| | |||||  |||| |||| ||||||| |||||| |   ||||||||  ||||||||  | |    
T  4135738 atcatatctagcactcgagattcgactctaactggatggtcagcaatgaacaggtctgtcttgtcaagcaaatgtgtaactttttcaacaatatccttga 4135837  T
Q  278 tagcctcactttcgttcctat 298  Q
    || ||||||||||||||||||    
T  4135838 tatcctcactttcgttcctat 4135858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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