View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19031_low_7 (Length: 263)
Name: NF19031_low_7
Description: NF19031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19031_low_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 18 - 263
Target Start/End: Complemental strand, 38935808 - 38935563
Alignment:
| Q |
18 |
gaacgctaacagaagtgaggcaccggaatataataaagctttatggtttctgttctatgaggagacaaatgttcctggtttatgaacatgtagagaaagg |
117 |
Q |
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| T |
38935808 |
gaacgctaacagaagtgaggcaccggaatataataaagctttatggtttctgttctatgaggagacaaatgttcctggtttatgaacatgtagagaaagg |
38935709 |
T |
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| Q |
118 |
aagcttgggaaaagtgttgtatggaggagaaggaaaattggagctaagttggagtgcaagggtgaaaattgtgcaaggaatagctcatgcaatcgcttac |
217 |
Q |
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| T |
38935708 |
aagcttgggaaaagtgttgtatggaggagaaggaaaattggagctaagttggagtgcaagggtggaaattgtgcaaggaatagctcatgcaatcgcttac |
38935609 |
T |
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| Q |
218 |
ctgcatagtgattgctctccaccaattgtgcacagagatataacat |
263 |
Q |
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| T |
38935608 |
ctgcatagtgattgctctccagcaattgtgcacagagatataacat |
38935563 |
T |
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