View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19032_high_14 (Length: 316)
Name: NF19032_high_14
Description: NF19032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19032_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 19 - 307
Target Start/End: Original strand, 19751340 - 19751627
Alignment:
| Q |
19 |
cttcctaccaattaacagctggcactaactactatatggttagattactcactttatgtacgatacactatagtaatagtgtagcttaatgctcaagtta |
118 |
Q |
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| T |
19751340 |
cttcctaccaattaacagctggcactaactactatatggttagattactcactctatgtaccatacactatagtaatagtgtagctaaa-gctcaagtta |
19751438 |
T |
|
| Q |
119 |
actaataccgagttacagttttgcaggtttaacaccaatcaccacaaaattcaaagtaattcctcaacctcccacaaaacagaacctgaaaccatatccc |
218 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
19751439 |
actaataccgagttacagttttgcaggtttaacaacaatcaccacaaaattcaaagtaattcctcaacctcctacaaaacagaacctgaaaccatatccc |
19751538 |
T |
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| Q |
219 |
tcgttgacaaacatggtgagaattcactgctatacatgaaaaaatatcccaaccaacattaaataatttggttaatgtccgagaataat |
307 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
19751539 |
tcgttgacaaacatggtgagaattcactgctatgcatgaaaaaatatcccaaccaacactaaataatttggttaatgtccgagaataat |
19751627 |
T |
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