View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19032_high_19 (Length: 272)

Name: NF19032_high_19
Description: NF19032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19032_high_19
NF19032_high_19
[»] chr3 (40 HSPs)
chr3 (131-219)||(30688084-30688172)
chr3 (217-272)||(29846899-29846954)
chr3 (213-272)||(46952942-46953001)
chr3 (214-272)||(29057653-29057711)
chr3 (218-272)||(49761317-49761371)
chr3 (219-272)||(47683800-47683853)
chr3 (216-268)||(1765400-1765452)
chr3 (216-272)||(55361241-55361297)
chr3 (217-272)||(23906995-23907050)
chr3 (217-272)||(43169761-43169816)
chr3 (1-50)||(30687963-30688013)
chr3 (217-271)||(36318291-36318345)
chr3 (218-272)||(50745558-50745612)
chr3 (219-272)||(28700471-28700524)
chr3 (219-272)||(35368621-35368674)
chr3 (220-257)||(48352996-48353033)
chr3 (219-272)||(48490521-48490574)
chr3 (220-272)||(3484770-3484822)
chr3 (220-272)||(23868986-23869038)
chr3 (221-272)||(42718132-42718184)
chr3 (216-272)||(44937215-44937271)
chr3 (216-272)||(48117343-48117399)
chr3 (219-271)||(50876371-50876423)
chr3 (216-271)||(32421637-32421692)
chr3 (218-272)||(24645366-24645420)
chr3 (218-272)||(49361843-49361897)
chr3 (219-272)||(11056930-11056983)
chr3 (219-272)||(21005183-21005236)
chr3 (216-257)||(34628104-34628145)
chr3 (220-257)||(49021711-49021748)
chr3 (218-271)||(51465922-51465975)
chr3 (220-257)||(52963350-52963387)
chr3 (220-272)||(1337846-1337898)
chr3 (220-272)||(9719460-9719512)
chr3 (217-257)||(11335336-11335376)
chr3 (219-271)||(28430741-28430793)
chr3 (220-272)||(28884491-28884543)
chr3 (221-257)||(42104466-42104502)
chr3 (221-272)||(51487760-51487809)
chr3 (217-257)||(54099391-54099431)
[»] chr2 (53 HSPs)
chr2 (220-272)||(38600825-38600877)
chr2 (219-271)||(10550468-10550520)
chr2 (213-272)||(4138193-4138252)
chr2 (218-272)||(5191702-5191756)
chr2 (218-272)||(6646833-6646887)
chr2 (218-272)||(42081046-42081100)
chr2 (219-272)||(15141472-15141525)
chr2 (219-272)||(40496360-40496413)
chr2 (217-269)||(3012856-3012908)
chr2 (217-257)||(4723563-4723603)
chr2 (220-272)||(7121390-7121442)
chr2 (216-272)||(29795443-29795499)
chr2 (220-272)||(45202140-45202192)
chr2 (214-257)||(18737908-18737951)
chr2 (218-272)||(28013965-28014019)
chr2 (218-272)||(32972914-32972968)
chr2 (218-272)||(40700205-40700259)
chr2 (218-267)||(1095849-1095898)
chr2 (218-271)||(2971823-2971876)
chr2 (219-272)||(42678760-42678813)
chr2 (219-271)||(285478-285530)
chr2 (217-257)||(1052530-1052570)
chr2 (220-272)||(24727426-24727478)
chr2 (220-272)||(43725216-43725268)
chr2 (218-265)||(694278-694325)
chr2 (214-257)||(29168719-29168762)
chr2 (217-272)||(30996736-30996791)
chr2 (217-272)||(40937071-40937126)
chr2 (218-257)||(42141628-42141667)
chr2 (218-272)||(4263872-4263925)
chr2 (218-272)||(8482240-8482294)
chr2 (218-272)||(10472155-10472208)
chr2 (218-272)||(10711734-10711788)
chr2 (218-272)||(11828828-11828882)
chr2 (242-272)||(13466083-13466113)
chr2 (214-272)||(22296137-22296195)
chr2 (242-272)||(41353505-41353535)
chr2 (219-269)||(44058730-44058780)
chr2 (223-269)||(44422981-44423027)
chr2 (219-272)||(22353183-22353236)
chr2 (219-272)||(26277106-26277159)
chr2 (218-267)||(37085234-37085283)
chr2 (219-272)||(37966366-37966419)
chr2 (220-257)||(40874295-40874332)
chr2 (244-272)||(546393-546421)
chr2 (217-257)||(5031920-5031960)
chr2 (244-272)||(6639480-6639508)
chr2 (220-272)||(8757555-8757607)
chr2 (219-271)||(9647143-9647194)
chr2 (220-272)||(25801821-25801873)
chr2 (220-272)||(27538924-27538976)
chr2 (216-272)||(42607538-42607594)
chr2 (220-272)||(42866762-42866814)
[»] chr1 (58 HSPs)
chr1 (219-272)||(5975547-5975600)
chr1 (216-272)||(50781577-50781633)
chr1 (217-272)||(33358166-33358221)
chr1 (218-272)||(8200085-8200139)
chr1 (218-272)||(14983782-14983836)
chr1 (218-272)||(31480127-31480181)
chr1 (218-272)||(40596062-40596116)
chr1 (218-272)||(45272168-45272222)
chr1 (218-271)||(4154590-4154643)
chr1 (215-272)||(40139121-40139178)
chr1 (219-272)||(48220151-48220204)
chr1 (220-272)||(41507202-41507254)
chr1 (221-272)||(19969569-19969620)
chr1 (217-272)||(27687527-27687582)
chr1 (217-272)||(30414872-30414927)
chr1 (220-271)||(34818053-34818104)
chr1 (217-272)||(44632537-44632592)
chr1 (221-272)||(45065909-45065960)
chr1 (214-272)||(42539412-42539470)
chr1 (218-268)||(43612092-43612142)
chr1 (218-272)||(46903479-46903533)
chr1 (218-272)||(49453489-49453543)
chr1 (218-272)||(50797789-50797843)
chr1 (220-257)||(24611844-24611881)
chr1 (220-265)||(48872043-48872088)
chr1 (219-272)||(49241512-49241565)
chr1 (216-272)||(3826823-3826879)
chr1 (220-272)||(16252767-16252819)
chr1 (220-272)||(18336158-18336210)
chr1 (220-272)||(47398459-47398511)
chr1 (218-253)||(24910172-24910207)
chr1 (218-269)||(38913596-38913647)
chr1 (221-272)||(50460720-50460771)
chr1 (221-272)||(51571416-51571467)
chr1 (242-272)||(1603027-1603057)
chr1 (218-272)||(11121490-11121544)
chr1 (215-257)||(18982514-18982556)
chr1 (219-257)||(25989018-25989056)
chr1 (242-272)||(31703486-31703516)
chr1 (220-262)||(47059908-47059950)
chr1 (218-272)||(48325786-48325840)
chr1 (218-271)||(1690444-1690497)
chr1 (223-272)||(5477171-5477220)
chr1 (219-272)||(15466757-15466810)
chr1 (220-272)||(30196724-30196777)
chr1 (220-269)||(35030773-35030822)
chr1 (219-272)||(43757598-43757651)
chr1 (219-268)||(47386817-47386866)
chr1 (220-257)||(49020438-49020475)
chr1 (220-272)||(51718634-51718687)
chr1 (244-272)||(2257702-2257730)
chr1 (217-257)||(11097918-11097958)
chr1 (220-272)||(16836123-16836175)
chr1 (217-257)||(21433435-21433475)
chr1 (216-272)||(21446226-21446282)
chr1 (244-272)||(30530407-30530435)
chr1 (220-272)||(32319316-32319368)
chr1 (223-271)||(36494478-36494526)
[»] chr8 (47 HSPs)
chr8 (216-272)||(324102-324158)
chr8 (216-272)||(37392136-37392192)
chr8 (218-272)||(7325724-7325778)
chr8 (216-272)||(41639807-41639863)
chr8 (217-272)||(30439513-30439568)
chr8 (218-272)||(45081078-45081132)
chr8 (218-270)||(14233654-14233706)
chr8 (218-270)||(42658643-42658695)
chr8 (217-272)||(5740793-5740848)
chr8 (221-272)||(39211054-39211105)
chr8 (218-272)||(13924020-13924074)
chr8 (218-272)||(29107993-29108047)
chr8 (218-272)||(37656999-37657053)
chr8 (218-272)||(41541867-41541921)
chr8 (219-272)||(7010684-7010737)
chr8 (221-270)||(32020475-32020524)
chr8 (220-272)||(1370293-1370345)
chr8 (220-272)||(6243045-6243097)
chr8 (220-272)||(32777896-32777948)
chr8 (220-272)||(41776186-41776238)
chr8 (220-272)||(45081398-45081450)
chr8 (221-272)||(32954853-32954904)
chr8 (220-271)||(36675336-36675387)
chr8 (214-257)||(43066628-43066671)
chr8 (220-266)||(9047084-9047130)
chr8 (218-272)||(14710901-14710955)
chr8 (218-272)||(18538384-18538438)
chr8 (218-272)||(25430655-25430709)
chr8 (218-272)||(38939197-38939251)
chr8 (218-272)||(40413357-40413411)
chr8 (242-272)||(41406864-41406894)
chr8 (219-257)||(42620011-42620049)
chr8 (242-271)||(3650146-3650175)
chr8 (219-272)||(5502370-5502423)
chr8 (243-272)||(24798365-24798394)
chr8 (220-272)||(38174241-38174294)
chr8 (219-272)||(42569736-42569789)
chr8 (219-272)||(45405827-45405880)
chr8 (220-272)||(1796496-1796548)
chr8 (221-269)||(9630136-9630184)
chr8 (223-271)||(11138910-11138958)
chr8 (216-256)||(11223894-11223934)
chr8 (244-272)||(21648939-21648967)
chr8 (220-272)||(37471654-37471706)
chr8 (216-272)||(43590701-43590757)
chr8 (220-272)||(44103776-44103828)
chr8 (218-250)||(45405529-45405561)
[»] scaffold0054 (1 HSPs)
scaffold0054 (217-272)||(31608-31663)
[»] chr5 (34 HSPs)
chr5 (218-272)||(14206398-14206452)
chr5 (219-272)||(39458667-39458720)
chr5 (220-272)||(16202731-16202783)
chr5 (221-272)||(33910096-33910147)
chr5 (218-272)||(372728-372782)
chr5 (218-272)||(4434480-4434534)
chr5 (218-272)||(9226311-9226365)
chr5 (218-272)||(12203156-12203210)
chr5 (218-272)||(13734368-13734422)
chr5 (218-272)||(14923081-14923134)
chr5 (223-272)||(1839352-1839401)
chr5 (219-272)||(6865795-6865848)
chr5 (226-271)||(31284403-31284448)
chr5 (220-272)||(5130386-5130438)
chr5 (216-263)||(4878294-4878341)
chr5 (217-272)||(32732126-32732181)
chr5 (219-257)||(1293120-1293158)
chr5 (218-272)||(3640204-3640258)
chr5 (219-257)||(4088442-4088480)
chr5 (242-272)||(31025013-31025043)
chr5 (218-272)||(33567231-33567285)
chr5 (219-253)||(39191872-39191906)
chr5 (219-272)||(8725430-8725483)
chr5 (218-267)||(12878754-12878803)
chr5 (218-271)||(15953053-15953106)
chr5 (220-257)||(16594410-16594447)
chr5 (220-257)||(25255252-25255289)
chr5 (220-257)||(25319042-25319079)
chr5 (220-265)||(41210528-41210573)
chr5 (219-272)||(43153068-43153121)
chr5 (244-272)||(18449296-18449324)
chr5 (216-256)||(26660446-26660486)
chr5 (216-256)||(26932038-26932078)
chr5 (218-270)||(34270337-34270389)
[»] chr4 (47 HSPs)
chr4 (216-272)||(28657448-28657504)
chr4 (218-272)||(43769721-43769775)
chr4 (215-272)||(1868901-1868958)
chr4 (219-272)||(31657657-31657710)
chr4 (219-272)||(42490919-42490972)
chr4 (220-268)||(4974111-4974159)
chr4 (220-272)||(24310529-24310581)
chr4 (219-271)||(35500808-35500860)
chr4 (220-272)||(44133544-44133596)
chr4 (221-272)||(5386385-5386436)
chr4 (218-272)||(4511823-4511877)
chr4 (218-272)||(46686243-46686296)
chr4 (219-272)||(2109442-2109495)
chr4 (219-272)||(26718379-26718432)
chr4 (219-272)||(26731007-26731060)
chr4 (220-257)||(39067984-39068021)
chr4 (219-272)||(39605978-39606030)
chr4 (215-272)||(46173545-46173602)
chr4 (219-272)||(50980601-50980654)
chr4 (218-271)||(54036538-54036591)
chr4 (219-267)||(27384186-27384234)
chr4 (220-272)||(30778272-30778324)
chr4 (220-272)||(32365675-32365727)
chr4 (220-272)||(39241309-39241361)
chr4 (220-271)||(17683359-17683410)
chr4 (221-272)||(28676160-28676211)
chr4 (218-269)||(31413797-31413848)
chr4 (218-257)||(37514166-37514205)
chr4 (217-272)||(55601708-55601763)
chr4 (218-272)||(4949516-4949570)
chr4 (215-269)||(7795020-7795074)
chr4 (219-257)||(15522353-15522391)
chr4 (218-272)||(37022270-37022324)
chr4 (242-272)||(46912807-46912837)
chr4 (218-267)||(7146144-7146193)
chr4 (219-272)||(9827991-9828044)
chr4 (219-272)||(32621637-32621690)
chr4 (220-257)||(35824140-35824177)
chr4 (220-253)||(47540135-47540168)
chr4 (219-268)||(48494924-48494973)
chr4 (220-257)||(50158995-50159032)
chr4 (220-272)||(15515795-15515847)
chr4 (220-272)||(17683236-17683288)
chr4 (220-272)||(29407045-29407097)
chr4 (244-272)||(36444403-36444431)
chr4 (220-272)||(37731926-37731978)
chr4 (220-272)||(39312623-39312675)
[»] chr7 (48 HSPs)
chr7 (217-272)||(6822541-6822596)
chr7 (220-271)||(8459614-8459665)
chr7 (214-272)||(40108129-40108187)
chr7 (219-272)||(25887593-25887646)
chr7 (220-261)||(44196238-44196279)
chr7 (216-272)||(22330639-22330695)
chr7 (221-272)||(7817650-7817701)
chr7 (217-272)||(11352981-11353036)
chr7 (218-272)||(2323302-2323356)
chr7 (218-272)||(2469701-2469755)
chr7 (218-272)||(3937129-3937183)
chr7 (217-267)||(28862094-28862144)
chr7 (218-272)||(37351998-37352052)
chr7 (214-272)||(37856173-37856231)
chr7 (218-272)||(43213317-43213371)
chr7 (219-272)||(24380729-24380782)
chr7 (219-272)||(27570354-27570407)
chr7 (219-272)||(33224834-33224887)
chr7 (219-272)||(35293127-35293180)
chr7 (218-267)||(39875822-39875871)
chr7 (219-272)||(47078258-47078311)
chr7 (217-257)||(24267681-24267721)
chr7 (220-272)||(27866545-27866597)
chr7 (220-272)||(33465047-33465099)
chr7 (221-272)||(3062343-3062394)
chr7 (214-269)||(37848631-37848686)
chr7 (221-272)||(38547298-38547349)
chr7 (217-272)||(41985108-41985163)
chr7 (217-272)||(41989750-41989804)
chr7 (218-272)||(26041319-26041373)
chr7 (218-272)||(31785479-31785533)
chr7 (219-257)||(42584801-42584839)
chr7 (218-272)||(43942647-43942700)
chr7 (242-272)||(46651705-46651735)
chr7 (218-267)||(23848087-23848136)
chr7 (220-257)||(34108889-34108926)
chr7 (216-253)||(35823013-35823050)
chr7 (220-257)||(36352621-36352658)
chr7 (220-257)||(40854689-40854726)
chr7 (220-269)||(43444635-43444684)
chr7 (219-272)||(45420068-45420121)
chr7 (219-272)||(49142525-49142578)
chr7 (244-272)||(5724073-5724101)
chr7 (216-272)||(5905973-5906029)
chr7 (220-272)||(8742394-8742446)
chr7 (228-272)||(22925290-22925334)
chr7 (220-272)||(25272602-25272654)
chr7 (218-254)||(39497339-39497375)
[»] chr6 (26 HSPs)
chr6 (217-271)||(28748121-28748175)
chr6 (218-271)||(6158789-6158842)
chr6 (219-272)||(9200118-9200171)
chr6 (215-272)||(26860623-26860679)
chr6 (220-272)||(32644623-32644675)
chr6 (217-272)||(31517188-31517243)
chr6 (217-267)||(16328714-16328764)
chr6 (215-272)||(5028273-5028330)
chr6 (218-271)||(12427236-12427289)
chr6 (218-270)||(2165310-2165362)
chr6 (218-270)||(2176943-2176995)
chr6 (217-257)||(9188978-9189018)
chr6 (216-272)||(28041821-28041877)
chr6 (218-257)||(8778906-8778945)
chr6 (214-269)||(16121157-16121212)
chr6 (217-272)||(17442830-17442885)
chr6 (217-272)||(25567498-25567553)
chr6 (218-257)||(26391319-26391358)
chr6 (218-272)||(1196056-1196110)
chr6 (242-272)||(7693348-7693378)
chr6 (218-272)||(12441536-12441590)
chr6 (242-272)||(30253321-30253351)
chr6 (219-272)||(2241826-2241879)
chr6 (220-272)||(9395345-9395397)
chr6 (244-272)||(18792440-18792468)
chr6 (220-272)||(32135439-32135491)
[»] scaffold0100 (1 HSPs)
scaffold0100 (218-269)||(44784-44835)
[»] scaffold0155 (1 HSPs)
scaffold0155 (219-272)||(3279-3332)
[»] scaffold0286 (1 HSPs)
scaffold0286 (218-270)||(17047-17099)
[»] scaffold0511 (1 HSPs)
scaffold0511 (244-272)||(11673-11701)
[»] scaffold0504 (1 HSPs)
scaffold0504 (221-269)||(11159-11207)
[»] scaffold0204 (1 HSPs)
scaffold0204 (218-246)||(27337-27365)


Alignment Details
Target: chr3 (Bit Score: 89; Significance: 6e-43; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 30688084 - 30688172
Alignment:
Q  131 ctccgatatttatttaattatgcctttggcttcttaaaaatactattaattatattccagtttcatttcaaggatatacattgaaataa 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30688084 ctccgatatttatttaattatgcctttggcttcttaaaaatactattaattatattccagtttcatttcaaggatatacattgaaataa 30688172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 29846954 - 29846899
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||    
T  29846954 taagagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcac 29846899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 46952942 - 46953001
Alignment:
Q  213 gaaataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||| |||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  46952942 gaaaaaagagaaatgatatttgtacaaccattttttgataactttctctctcatactcac 46953001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 29057653 - 29057711
Alignment:
Q  214 aaataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||| |||||||||||| |||||| ||||||||  |||||||||||||||||||||||    
T  29057653 aaatacgagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcac 29057711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 49761317 - 49761371
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  49761317 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 49761371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 47683800 - 47683853
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| ||||||| | |||||||||||||||||||||||    
T  47683800 agagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcac 47683853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 1765400 - 1765452
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatac 268  Q
    |||||||||||||||| ||||||| |||||| | |||||||||||||||||||    
T  1765400 ataagagaaatgatatttgtacattcattttgtgacaactttctctctcatac 1765452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 55361297 - 55361241
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| |||||| |||||| || |||||||||||||| ||||||||    
T  55361297 ataagagaaatgatatttgtacaaccatttcttgacaactttctctcttatactcac 55361241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 23907050 - 23906995
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| |||||| ||||| | | |||||||||||||||||||||||    
T  23907050 taagagaaatgatatttgtacaaccattatgttacaactttctctctcatactcac 23906995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 43169816 - 43169761
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| |||||| ||||||| | |||||||| ||||||||||||||    
T  43169816 taagagaaatgatatttgtacaaccattttgtgacaactttttctctcatactcac 43169761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30687963 - 30688013
Alignment:
Q  1 tctgatggactaaaccatt-gtttgtctaggttactccatcttgcagtaat 50  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  30687963 tctggtggactaaaccatttgtctgtctaggttactccatcttgcagtaat 30688013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 36318345 - 36318291
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    ||||||||||||||| |||| ||||| ||||| |||| |||||||||||||||||    
T  36318345 taagagaaatgatatttgtatatccactttttgacaattttctctctcatactca 36318291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 50745558 - 50745612
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| ||||||  |||||||  |||||||||||||||||||||||    
T  50745558 aagagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcac 50745612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 28700471 - 28700524
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||| ||||||||| |||||||| ||||||||||||||    
T  28700471 agagaaatgatatttgaacaaccattttttgacaactttatctctcatactcac 28700524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 35368621 - 35368674
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| | ||||||  |||||||||||||||||||||||    
T  35368621 agagaaatgatatttgtacaactatttttgtacaactttctctctcatactcac 35368674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 48352996 - 48353033
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||| |||||||||||||||||||||||||    
T  48352996 gagaaatgatatttgtacatccattttttaacaacttt 48353033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 48490574 - 48490521
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| ||| ||||  |||||||||||||||||||||||    
T  48490574 agagaaatgatatttgtacaaccacttttgtacaactttctctctcatactcac 48490521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 3484770 - 3484822
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| ||| || ||||||| | |||||||||||||||||||||||    
T  3484770 gagaaatgatatttgtccaaccattttattacaactttctctctcatactcac 3484822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 23869038 - 23868986
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||| |||||| ||||||| ||||||||||    
T  23869038 gagaaatgatatttgtacaaccattttataacaattttctctttcatactcac 23868986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 42718132 - 42718184
Alignment:
Q  221 agaaatgatatatgtacatccatttt-ttaacaactttctctctcatactcac 272  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||| ||||    
T  42718132 agaaatgatatttgtacaaccattttattaacaactttctctctcatattcac 42718184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 44937215 - 44937271
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| |||||| | ||||||| |||||||||||| | ||||||||    
T  44937215 ataagagaaatgatatttgtacaacaattttttgacaactttctcttttatactcac 44937271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 48117343 - 48117399
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| | |||| ||||||||  |||||||||||| ||||||||||    
T  48117343 ataagagaaatgatatttatacaaccatttttgtacaactttctctttcatactcac 48117399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 50876423 - 50876371
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    ||||||||||||| |||||| | ||||||| |||||||||||| |||||||||    
T  50876423 agagaaatgatatttgtacaacaattttttgacaactttctctatcatactca 50876371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 32421692 - 32421637
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||||||| || ||||| ||||  ||| ||||||||||||||||||||    
T  32421692 ataagagaaatgatatttgaacatctatttgataataactttctctctcatactca 32421637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 24645366 - 24645420
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||| ||||||||| || ||||||||||| | |||||||| ||||||||||||||    
T  24645366 aagaaaaatgatatttgaacatccattttatgacaactttttctctcatactcac 24645420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 49361897 - 49361843
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| ||||||  |||||||  |||||||| ||||||||||||||    
T  49361897 aagagaaatgatatttgtacaatcatttttgtacaactttttctctcatactcac 49361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 11056983 - 11056930
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| | ||||||| |||||||||||| ||||| ||||    
T  11056983 agagaaatgatatttgtacaacaattttttgacaactttctctttcatattcac 11056930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 21005236 - 21005183
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||||| ||||| | |||||||||||||| ||||||||    
T  21005236 agagaaatgatatttgaacatctattttgtgacaactttctctcttatactcac 21005183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 34628145 - 34628104
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  34628145 ataagataaatgatatttgtacaaccattttttaacaacttt 34628104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 49021711 - 49021748
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  49021711 gagaaatgatatttgtacatccattttttaataacttt 49021748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 51465975 - 51465922
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||||| || ||||| ||||| | || |||||||||||||||||||    
T  51465975 aagagaaatgatatttgaacatctattttgtgaccactttctctctcatactca 51465922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 52963387 - 52963350
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  52963387 gagaaatgatatttgtacaaccattttttaacaacttt 52963350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 1337898 - 1337846
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| || ||||||||||| | |||| ||||| ||||||||||||    
T  1337898 gagaaatgatatttgaacatccattttatgacaattttctatctcatactcac 1337846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 9719512 - 9719460
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||| ||||| |||| |||| |||||||||||||    
T  9719512 gagaaatgatatttgtacaaccactttttgacaattttccctctcatactcac 9719460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 11335376 - 11335336
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||| |||||| ||||||| ||||||||||    
T  11335376 taagagaaatgatatttgtacaaccattttctaacaacttt 11335336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 28430741 - 28430793
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||| |||| || ||||||||||  |||||||||||||| |||||||||    
T  28430741 agagaaataatatttgaacatccatttgataacaactttctctatcatactca 28430793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 28884491 - 28884543
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||| |||| |||||| ||||| | | |||||||||||||||||||||||    
T  28884491 gagaaataatatttgtacaaccattatgtgacaactttctctctcatactcac 28884543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 42104466 - 42104502
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  42104466 agaaatgatatatgtacatccactttttgacaacttt 42104502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 51487760 - 51487809
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| |||||||  ||||||| |||| ||||||||||||||||||    
T  51487760 agaaatgatatttgtacat--attttttgacaattttctctctcatactcac 51487809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 54099431 - 54099391
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||| |||| |||||||||||||| ||||||||||    
T  54099431 taagagaaataatatttgtacatccattttctaacaacttt 54099391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 38600825 - 38600877
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38600825 gagaaatgatatatgtacatccattttttgacaactttctctctcatactcac 38600877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 10550520 - 10550468
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  10550520 agagaaatgatatatgtacaactattttttcacaactttctctctcatactca 10550468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 4138252 - 4138193
Alignment:
Q  213 gaaataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||||||| |||| | | ||||| |||||||||||||||||||||||||    
T  4138252 gaaataagagaaatgatatttgtataactattttctaacaactttctctctcatactcac 4138193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 5191756 - 5191702
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| ||||||||  | |||||||||||||||||||||||||||||    
T  5191756 aagagaaatgatagatgtacatttactttttaacaactttctctctcatactcac 5191702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 6646833 - 6646887
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  6646833 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 6646887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 42081046 - 42081100
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||    
T  42081046 aagagaaatgatatttgtacagccactttttgacaactttctctctcatactcac 42081100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 15141472 - 15141525
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||||| ||||| | |||||||||||||||||||||||    
T  15141472 agagaaatgatatttgtacatctattttatgacaactttctctctcatactcac 15141525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 40496360 - 40496413
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  40496360 agagtaatgatatatgtaaatccactttttgacaactttctctctcatactcac 40496413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 3012908 - 3012856
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    ||||||||||||||| || ||||||||||| | ||||||||||||||||||||    
T  3012908 taagagaaatgatatttgaacatccattttgtgacaactttctctctcatact 3012856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 4723563 - 4723603
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  4723563 taagagaaatgatatatgtacaaccattttttaacaacttt 4723603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 7121390 - 7121442
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||| | ||||||| |||||||||||||||||||||||||    
T  7121390 gagaaatgatatttgtataaccattttgtaacaactttctctctcatactcac 7121442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 29795443 - 29795499
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||    
T  29795443 ataagagaaatgatatttgtacaaccattttgtgacaactttctctcacatactcac 29795499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 45202192 - 45202140
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||||| ||||    
T  45202192 gagaaatgatatttgtacaaccatttttttacaactttctctctcatattcac 45202140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 18737951 - 18737908
Alignment:
Q  214 aaataagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||||||||| |||| ||||||||||||||||||||    
T  18737951 aaataagagaaatgatatttgtatatccattttttaacaacttt 18737908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 28013965 - 28014019
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||| |||| |||||| ||| ||||| |||||||||||||||||||||||    
T  28013965 aagagaaattatatttgtacaaccaatttttgacaactttctctctcatactcac 28014019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 32972968 - 32972914
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||| ||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  32972968 aagataaatgatatttgaacatccattttgtgacaactttctctctcatactcac 32972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 40700205 - 40700259
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||| ||| |||||| | ||||| |||||||||||||||||||||||||    
T  40700205 aagagaaatggtatttgtacaactattttataacaactttctctctcatactcac 40700259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 1095898 - 1095849
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcata 267  Q
    |||||||||||||| |||||||||||||| | |||| |||||||||||||    
T  1095898 aagagaaatgatatttgtacatccattttatgacaattttctctctcata 1095849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 2971876 - 2971823
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||| ||||| || ||||||||||| | ||||||||||||||||||||||    
T  2971876 aagagaaaagatatttgaacatccattttgtgacaactttctctctcatactca 2971823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 42678760 - 42678813
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||||||||||  | |||||||||||||||||||||||    
T  42678760 agagaaatgatatttgaacatccatttagtgacaactttctctctcatactcac 42678813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 285530 - 285478
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    ||||||||||||| ||||||| ||||||  |||||||||||||| ||||||||    
T  285530 agagaaatgatatttgtacattcattttggaacaactttctctcgcatactca 285478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 1052570 - 1052530
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  1052570 taagagaaatgatatttgtacaaccattttttaacaacttt 1052530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 24727426 - 24727478
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| |||||||   |||||||||||||||||||||||    
T  24727426 gagaaatgatatttgtacaaccattttggtacaactttctctctcatactcac 24727478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 43725216 - 43725268
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||||| | ||| | |||||||||||||||||||||||    
T  43725216 gagaaatgatatttgtacatctactttatgacaactttctctctcatactcac 43725268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 694278 - 694325
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctca 265  Q
    |||||||||||||| |||||| ||||||||| |||| |||||||||||    
T  694278 aagagaaatgatatttgtacaaccattttttgacaattttctctctca 694325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 29168719 - 29168762
Alignment:
Q  214 aaataagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||    
T  29168719 aaataagagaaatgatatttgtacaaccattttttgacaacttt 29168762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 30996736 - 30996791
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||| ||||||||| |||||||  | ||||| |||||||||||||||||||||||    
T  30996736 taagataaatgatatttgtacatttactttttgacaactttctctctcatactcac 30996791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 40937126 - 40937071
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| || || ||||||||||| | | |||||||||||||||||||||    
T  40937126 taagagaaatgacatttgaacatccattttgtgataactttctctctcatactcac 40937071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 42141667 - 42141628
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  42141667 aagagaaatgatatatgtacaaccattttttcacaacttt 42141628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 4263925 - 4263872
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| | ||||||| |||||||||||| ||||||||||    
T  4263925 aagagaaatgatatttgtacaac-attttttgacaactttctctttcatactcac 4263872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 8482294 - 8482240
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||| ||| | |||||||||||||||||| ||||    
T  8482294 aagagaaatgatatttgtacaaccactttatgacaactttctctctcatattcac 8482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 10472208 - 10472155
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||| |||| |||| | ||||||| |||||||||||||||||||||||||    
T  10472208 aagagaaat-atatttgtataaccattttctaacaactttctctctcatactcac 10472155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 10711734 - 10711788
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||||| ||||| | |||| ||||||||||||||||||    
T  10711734 aagagaaatgatatttgaacatctattttgtgacaattttctctctcatactcac 10711788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 11828882 - 11828828
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||| ||||||||| |||||| ||||||||  |||||||||||||||||| ||||    
T  11828882 aagataaatgatatttgtacaaccatttttgtacaactttctctctcatattcac 11828828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 272
Target Start/End: Complemental strand, 13466113 - 13466083
Alignment:
Q  242 attttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||||    
T  13466113 attttttaacaactttctctctcatactcac 13466083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 22296195 - 22296137
Alignment:
Q  214 aaataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||| ||||||||||||| |||||| ||||||||  |||| ||||||||| ||||||||    
T  22296195 aaattagagaaatgatatttgtacaaccatttttgtacaattttctctctgatactcac 22296137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 272
Target Start/End: Complemental strand, 41353535 - 41353505
Alignment:
Q  242 attttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||||    
T  41353535 attttttaacaactttctctctcatactcac 41353505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 44058730 - 44058780
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    ||||||||||||| ||||||  |||||||||| ||| ||||||||||||||    
T  44058730 agagaaatgatatttgtacaatcattttttaataacgttctctctcatact 44058780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 44422981 - 44423027
Alignment:
Q  223 aaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    ||||||||| |||||| ||| |||||||||||||||||| |||||||    
T  44422981 aaatgatatttgtacaaccactttttaacaactttctctttcatact 44423027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 22353236 - 22353183
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| ||||||  |||||| | |||||||||| ||||||||||||    
T  22353236 agagaaatgatatttgtacaatcattttgtgacaactttctttctcatactcac 22353183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 26277106 - 26277159
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||||||||||  | |||||||||||||| ||||||||    
T  26277106 agagaaatgatatttgaacatccatttagtgacaactttctctcttatactcac 26277159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 37085283 - 37085234
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcata 267  Q
    |||||||||||||| ||||||| || ||| |||||||||||||| |||||    
T  37085283 aagagaaatgatatttgtacattcaatttgtaacaactttctctttcata 37085234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 37966366 - 37966419
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| ||| ||| | |||||||| ||||||||||||||    
T  37966366 agagaaatgatatttgtacaaccaatttgtgacaactttttctctcatactcac 37966419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 40874332 - 40874295
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  40874332 gagaaatgatatttgtacaaccattttttaacaacttt 40874295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 546421 - 546393
Alignment:
Q  244 tttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||    
T  546421 tttttaacaactttctctctcatactcac 546393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 5031920 - 5031960
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||| |||||| ||||||| ||||||||||    
T  5031920 taagagaaatgatatttgtacaaccattttgtaacaacttt 5031960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 6639508 - 6639480
Alignment:
Q  244 tttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||    
T  6639508 tttttaacaactttctctctcatactcac 6639480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 8757555 - 8757607
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||| ||| |||||| ||||||||  |||||||| ||||||||||||||    
T  8757555 gagaaatgttatttgtacaaccatttttatacaactttatctctcatactcac 8757607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 9647143 - 9647194
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    ||||||||||||| || ||| | |||||||| |||||||||||||||||||||    
T  9647143 agagaaatgatatttgaacaactatttttta-caactttctctctcatactca 9647194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 25801873 - 25801821
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||| ||| | |||||||| ||||||||||||||    
T  25801873 gagaaatgatatttgtacaaccaatttgtgacaactttatctctcatactcac 25801821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 27538976 - 27538924
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||||  |||||||||||| | ||||||||    
T  27538976 gagaaatgatatttgtacaaccatttttgtacaactttctctatgatactcac 27538924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 42607594 - 42607538
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| ||||||   ||||| | |||| ||||||||||||||||||    
T  42607594 ataagagaaatgatatttgtacaattattttgtgacaattttctctctcatactcac 42607538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 42866762 - 42866814
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| || || |||||||| | |||||||| ||||||||||||||    
T  42866762 gagaaatgatatttgaacgtccattttgtgacaactttttctctcatactcac 42866814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 5975547 - 5975600
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  5975547 agagaaatgatatatgtacatccactttttgacaactttctctctcatactcac 5975600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 50781633 - 50781577
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  50781633 ataagagaaatgatatttgaacatccattttatgacaactttctctctcatactcac 50781577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 33358221 - 33358166
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  33358221 taagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 33358166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 8200085 - 8200139
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  8200085 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 8200139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 14983782 - 14983836
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  14983782 aagagaaatgatatttgtacaaccactttttaacaactttctctctcatattcac 14983836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 31480181 - 31480127
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||||||||||||| ||| | | |||||||||||||||||||||    
T  31480181 aagagaaatgatatatgtacatccactttgtgataactttctctctcatactcac 31480127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 40596116 - 40596062
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||||||| | |||||||||||||||||||||||    
T  40596116 aagagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcac 40596062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 45272222 - 45272168
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||    
T  45272222 aagagaaatgatatttgtacaaccactttttgacaactttctctctcatactcac 45272168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 4154590 - 4154643
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    ||||||||||||||||||||||  | ||||| ||||||||||||||||||||||    
T  4154590 aagagaaatgatatatgtacatttactttttgacaactttctctctcatactca 4154643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 40139121 - 40139178
Alignment:
Q  215 aataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||| |||||||||||| |||||| ||||||| | |||||||||||||||||||||||    
T  40139121 aatatgagaaatgatatttgtacaaccattttatgacaactttctctctcatactcac 40139178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 48220204 - 48220151
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  48220204 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 48220151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 41507254 - 41507202
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||| | |||||||||||||||||||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcac 41507202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 19969620 - 19969569
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  19969620 agaaatgatatttgaacatccattttatgacaactttctctctcatactcac 19969569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 27687582 - 27687527
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| |||||| ||||||| | |||||||| ||||||||||||||    
T  27687582 taagagaaatgatatttgtacaaccattttgtgacaactttatctctcatactcac 27687527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 30414872 - 30414927
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| |||||| ||||||||  ||||| |||||||||||||||||    
T  30414872 taagagaaatgatatttgtacaaccatttttgtacaaccttctctctcatactcac 30414927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 34818104 - 34818053
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||| ||||||| |||||  ||||||||||||||||||||||||    
T  34818104 gagaaatgatatttgtacattcatttcctaacaactttctctctcatactca 34818053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 44632537 - 44632592
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| || ||||||||||  | |||||||||||||||||||||||    
T  44632537 taagagaaatgatatttgaacatccatttggtgacaactttctctctcatactcac 44632592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 45065960 - 45065909
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  45065960 agaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 45065909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 42539412 - 42539470
Alignment:
Q  214 aaataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||| |||||| ||||| | | |||||||||||||||| ||||||    
T  42539412 aaataagagaaatgatatttgtacaaccattatgtgacaactttctctctcagactcac 42539470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 43612142 - 43612092
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatac 268  Q
    |||||||||||||| |||||| ||||||| | |||||||||||||||||||    
T  43612142 aagagaaatgatatttgtacaaccattttatgacaactttctctctcatac 43612092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 46903479 - 46903533
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| |||||||   |||||||||||||||||||||||    
T  46903479 aagagaaatgatatttgtacaaccattttgatacaactttctctctcatactcac 46903533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 49453489 - 49453543
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||| ||| | |||||||||||||||||||||||    
T  49453489 aagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 49453543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 50797789 - 50797843
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| ||||||  |||||| | |||||||||||||||||||||||    
T  50797789 aagagaaatgatatttgtacaatcattttgtgacaactttctctctcatactcac 50797843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 24611844 - 24611881
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  24611844 gagaaatgatatatgtacatccactttttaacaacttt 24611881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 48872088 - 48872043
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctca 265  Q
    |||||||||||| |||||| ||||||||| ||||||||||||||||    
T  48872088 gagaaatgatatttgtacaaccattttttgacaactttctctctca 48872043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 49241565 - 49241512
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||||||| ||| | |||||||||||||||||||||||    
T  49241565 agagaaatgatatttgaacatccactttgtgacaactttctctctcatactcac 49241512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 3826879 - 3826823
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| |||||| | | |||||||||||||| ||||||||| ||||    
T  3826879 ataagagaaatgatatttgtacaactaatttttaacaactttatctctcatattcac 3826823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 16252819 - 16252767
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||||  |||||||||||| ||||||||||    
T  16252819 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatactcac 16252767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 18336158 - 18336210
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| || |||| |||||| | |||||||||||||||||||||||    
T  18336158 gagaaatgatatttgaacattcattttgtgacaactttctctctcatactcac 18336210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 47398511 - 47398459
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| || |||| |||||||| |||| ||||||||||||||||||    
T  47398511 gagaaatgatatttgaacattcattttttgacaattttctctctcatactcac 47398459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 253
Target Start/End: Complemental strand, 24910207 - 24910172
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaa 253  Q
    ||||||||||||||||||||||||| ||||||||||    
T  24910207 aagagaaatgatatatgtacatccactttttaacaa 24910172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 38913596 - 38913647
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    |||||||||||||| |||||| ||| ||| | ||||||||||||||||||||    
T  38913596 aagagaaatgatatctgtacaaccactttctcacaactttctctctcatact 38913647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 50460771 - 50460720
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| |||||| ||||||||  |||||||||| ||||||||||||    
T  50460771 agaaatgatatttgtacaaccatttttgtacaactttctttctcatactcac 50460720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 51571416 - 51571467
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| |||||| ||| ||||| |||||||||||||||||| ||||    
T  51571416 agaaatgatatttgtacaaccactttttgacaactttctctctcatattcac 51571467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 272
Target Start/End: Original strand, 1603027 - 1603057
Alignment:
Q  242 attttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||||    
T  1603027 attttttaacaactttctctctcatactcac 1603057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 11121490 - 11121544
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| | | ||||  |||||||||||||||||||||||    
T  11121490 aagagaaatgatatttgtacaacaacttttgtacaactttctctctcatactcac 11121544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 18982514 - 18982556
Alignment:
Q  215 aataagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||| |||||||| || ||||||||||||||||||||||    
T  18982514 aataagagtaatgatatttgaacatccattttttaacaacttt 18982556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 25989056 - 25989018
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  25989056 agagaaatgatatttgtacaaccattttttaacaacttt 25989018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 272
Target Start/End: Complemental strand, 31703516 - 31703486
Alignment:
Q  242 attttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||||    
T  31703516 attttttaacaactttctctctcatactcac 31703486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 47059950 - 47059908
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctc 262  Q
    |||||||||||| |||||| |||||||||||||||||| ||||    
T  47059950 gagaaatgatatttgtacaaccattttttaacaactttatctc 47059908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 48325840 - 48325786
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||||||| | |||| ||||| ||||||||||||    
T  48325840 aagagaaatgatatttgtacaaccattttgtgacaattttctatctcatactcac 48325786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 1690444 - 1690497
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    ||||||||| |||| |||||| ||||||| | |||||||| |||||||||||||    
T  1690444 aagagaaataatatttgtacaaccattttgtgacaactttttctctcatactca 1690497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 5477220 - 5477171
Alignment:
Q  223 aaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||| |||||| ||| ||| | |||||||||||||||||||||||    
T  5477220 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 5477171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 15466757 - 15466810
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||||||| ||| |||||||||| |||| |||| ||||    
T  15466757 agagaaatgatatttgtacatccactttgtaacaactttatctcacatattcac 15466810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 30196724 - 30196777
Alignment:
Q  220 gagaaatgatatatgtaca-tccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| | |||| || ||||||| |||||||||||||||||||||||    
T  30196724 gagaaatgatatttctacaatcaattttttgacaactttctctctcatactcac 30196777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 35030822 - 35030773
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    |||||||| ||| |||||| ||||||||  ||||||||||||||||||||    
T  35030822 gagaaatgttatttgtacaaccatttttgtacaactttctctctcatact 35030773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 43757598 - 43757651
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| |||||||   |||||||||||| ||||||||||    
T  43757598 agagaaatgatatttgtacaaccattttgatacaactttctctttcatactcac 43757651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 47386866 - 47386817
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatac 268  Q
    ||||||||||||| |||||| ||||||| |||||||||| ||||| ||||    
T  47386866 agagaaatgatatttgtacaaccattttataacaactttatctcttatac 47386817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 49020475 - 49020438
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  49020475 gagaaatgatatttgtacaaccattttttaacaacttt 49020438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 51718687 - 51718634
Alignment:
Q  220 gagaaatgatatatgtacatccatttttta-acaactttctctctcatactcac 272  Q
    |||||||||||| || ||| |||||||||  |||||||||||||||||||||||    
T  51718687 gagaaatgatatttgaacaaccatttttttcacaactttctctctcatactcac 51718634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 2257730 - 2257702
Alignment:
Q  244 tttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||    
T  2257730 tttttaacaactttctctctcatactcac 2257702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 11097958 - 11097918
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||| |||||||||||||| | ||||||||    
T  11097958 taagagaaatgatatttgtacatccattttgtgacaacttt 11097918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 16836175 - 16836123
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| ||||||  |||||| | |||||||| ||||||||||||||    
T  16836175 gagaaatgatatttgtacaatcattttgtgacaactttttctctcatactcac 16836123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 21433475 - 21433435
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||| |||||| ||||||| ||||||||||    
T  21433475 taagagaaatgatatttgtacaaccattttgtaacaacttt 21433435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 21446282 - 21446226
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| | ||||  ||||||   |||||||||||||||||||||||    
T  21446282 ataagagaaatgatatttatacaatcattttagtacaactttctctctcatactcac 21446226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 30530435 - 30530407
Alignment:
Q  244 tttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||    
T  30530435 tttttaacaactttctctctcatactcac 30530407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 32319368 - 32319316
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |  ||||||||||  | |||||||||||||||||||||||    
T  32319368 gagaaatgatatttaaacatccatttggtgacaactttctctctcatactcac 32319316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 36494478 - 36494526
Alignment:
Q  223 aaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    ||||||||| || ||||||||||  | ||||||||||||||||||||||    
T  36494478 aaatgatatttgaacatccatttagtgacaactttctctctcatactca 36494526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 324158 - 324102
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  324158 ataagagaaatgatatatgtacatccactttttgacaactttctctgtcatactcac 324102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 37392192 - 37392136
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  37392192 ataagagaaatgatatttgtacaaccattttttgacaactttctctctcatactcac 37392136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 7325724 - 7325778
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  7325724 aagagaaatgatatttgtacatccactttataacaactttctctctcatactcac 7325778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 41639863 - 41639807
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||    
T  41639863 ataagagaaatgatatttgtacatccattttctaacaattttttctctcatactcac 41639807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 30439568 - 30439513
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  30439568 taagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 30439513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 45081078 - 45081132
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||    
T  45081078 aagagaaatgatatatgtacattcattttttgacaactttccctctcatattcac 45081132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 14233706 - 14233654
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactc 270  Q
    |||||||||||||| |||||| | ||||||| |||||||||||||||||||||    
T  14233706 aagagaaatgatatttgtacaactatttttttacaactttctctctcatactc 14233654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 42658643 - 42658695
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactc 270  Q
    |||| |||||||||||||||||| | ||||| |||||||||||||||||||||    
T  42658643 aagataaatgatatatgtacatctactttttgacaactttctctctcatactc 42658695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 5740848 - 5740793
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| |||||| ||| ||||| |||||||| ||||||||||||||    
T  5740848 taagagaaatgatatttgtacaaccactttttgacaactttttctctcatactcac 5740793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 39211054 - 39211105
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| || ||| ||||||||| |||||||||||||||||||||||    
T  39211054 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcac 39211105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 13924020 - 13924074
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||||||||  ||||||||||||||||| |||||    
T  13924020 aagagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcac 13924074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 29107993 - 29108047
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| ||||||  ||||||||||||||||||||| | ||||||||    
T  29107993 aagagaaatgatatttgtacaatcattttttaacaactttctcttttatactcac 29108047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 37656999 - 37657053
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||||||||||  | |||||||||||||||||||||||    
T  37656999 aagagaaatgatatttgaacatccatttagtgacaactttctctctcatactcac 37657053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 41541867 - 41541921
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||||||||||| | |||||||||||||| ||||||||    
T  41541867 aagagaaatgatatttgaacatccattttgtgacaactttctctcttatactcac 41541921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 7010684 - 7010737
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| ||||||  |||||||| |||| ||||||||||||||||||    
T  7010684 agagaaatgatatttgtacaatcattttttgacaattttctctctcatactcac 7010737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 32020524 - 32020475
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactc 270  Q
    ||||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  32020524 agaaatgatatttgtacaaccattttttgataactttctctctcatactc 32020475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 1370345 - 1370293
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||| ||| ||||||||||||||| |||||||||    
T  1370345 gagaaatgatatttgtacaaccactttgtaacaactttctctcacatactcac 1370293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 6243045 - 6243097
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| ||||||  |||||||  |||||||||||||||||||||||    
T  6243045 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcac 6243097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 32777896 - 32777948
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||||  |||||||||||||| ||||||||    
T  32777896 gagaaatgatatctgtacaaccatttttatacaactttctctcttatactcac 32777948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 41776186 - 41776238
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| | ||||||  |||||||||||||||||||||||    
T  41776186 gagaaatgatatttgtacaactatttttgtacaactttctctctcatactcac 41776238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 45081398 - 45081450
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||| |||||||||| ||| ||||||||||||||    
T  45081398 gagaaatgatatttgtacaaccaatttttaacaattttgtctctcatactcac 45081450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 32954853 - 32954904
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| || ||||||||||| | |||||||||||||| ||||||||    
T  32954853 agaaatgatatttgaacatccattttgtgacaactttctctctgatactcac 32954904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 36675336 - 36675387
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||| |||||| ||||||||  |||||||| |||||||||||||    
T  36675336 gagaaatgatatttgtacaaccatttttgtacaactttttctctcatactca 36675387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 43066671 - 43066628
Alignment:
Q  214 aaataagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||    
T  43066671 aaataagagaaatgatatttgtacaaccactttttaacaacttt 43066628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 9047130 - 9047084
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcat 266  Q
    |||||||||||| |||||| ||| ||||| |||||||||||||||||    
T  9047130 gagaaatgatatttgtacaaccactttttgacaactttctctctcat 9047084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 14710955 - 14710901
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||| ||||||||| ||||||  |||||| | |||||||||||||||||||||||    
T  14710955 aagataaatgatatttgtacaatcattttgtgacaactttctctctcatactcac 14710901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 18538384 - 18538438
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||  |||||| ||| ||||| |||||||| ||||||||||||||    
T  18538384 aagagaaatgatacttgtacaaccactttttgacaactttatctctcatactcac 18538438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 25430655 - 25430709
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||||||||  ||||| |||| ||||||||||||    
T  25430655 aagagaaatgatatttgtacaaccatttttgtacaaccttctatctcatactcac 25430709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 38939251 - 38939197
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| | |||| | ||||||  |||||||||||||||||||||||    
T  38939251 aagagaaatgatatttctacaactatttttgtacaactttctctctcatactcac 38939197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 40413411 - 40413357
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| ||||||   ||||| | |||||||||||||||||||||||    
T  40413411 aagagaaatgatatttgtacaattattttgtgacaactttctctctcatactcac 40413357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 272
Target Start/End: Complemental strand, 41406894 - 41406864
Alignment:
Q  242 attttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||||    
T  41406894 attttttaacaactttctctctcatactcac 41406864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 42620049 - 42620011
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  42620049 agagaaatgatatttgtacatccattttctaacaacttt 42620011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 242 - 271
Target Start/End: Original strand, 3650146 - 3650175
Alignment:
Q  242 attttttaacaactttctctctcatactca 271  Q
    ||||||||||||||||||||||||||||||    
T  3650146 attttttaacaactttctctctcatactca 3650175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 5502370 - 5502423
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| ||| ||| | |||||||||||||||||| ||||    
T  5502370 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatattcac 5502423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 243 - 272
Target Start/End: Complemental strand, 24798394 - 24798365
Alignment:
Q  243 ttttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||||||||||||||||||    
T  24798394 ttttttaacaactttctctctcatactcac 24798365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 38174294 - 38174241
Alignment:
Q  220 gagaaatgatatatgtacatccatttttta-acaactttctctctcatactcac 272  Q
    |||||||||||| |||||| | || ||||| |||||||||||||||||||||||    
T  38174294 gagaaatgatatttgtacaactatcttttagacaactttctctctcatactcac 38174241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 42569789 - 42569736
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || |||| |||||| | |||||||||||||||||| ||||    
T  42569789 agagaaatgatatttgaacattcattttatgacaactttctctctcatattcac 42569736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 45405880 - 45405827
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| |||||||   |||||||| ||||||||||||||    
T  45405880 agagaaatgatatttgtacaaccattttgatacaactttttctctcatactcac 45405827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 1796496 - 1796548
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||| ||| | |||||||||| ||||||||||||    
T  1796496 gagaaatgatatttgtacaaccactttgtgacaactttctttctcatactcac 1796548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 9630136 - 9630184
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    ||||||||||| || |||  ||||||||||||||||||||| |||||||    
T  9630136 agaaatgatatttgaacaatcattttttaacaactttctctttcatact 9630184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 11138910 - 11138958
Alignment:
Q  223 aaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    ||||||||| |||||| | ||||| | ||||||||||||||||||||||    
T  11138910 aaatgatatttgtacaactattttgtgacaactttctctctcatactca 11138958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 11223934 - 11223894
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactt 256  Q
    |||||||||||||||| |||||||||||||| | |||||||    
T  11223934 ataagagaaatgatatttgtacatccattttgtgacaactt 11223894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 21648967 - 21648939
Alignment:
Q  244 tttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||    
T  21648967 tttttaacaactttctctctcatactcac 21648939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 37471654 - 37471706
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| ||||||  |||||||  ||||||||||||||| |||||||    
T  37471654 gagaaatgatatttgtacaatcatttttgtacaactttctctctcgtactcac 37471706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 43590701 - 43590757
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| |||| |  |||||||  | |||||||||||||||||||||    
T  43590701 ataagagaaatgatatttgtataatcatttttgtataactttctctctcatactcac 43590757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 44103776 - 44103828
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||| |||| |||||| ||| ||| | |||||||||||||||||||||||    
T  44103776 gagaaattatatttgtacaaccactttatgacaactttctctctcatactcac 44103828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 45405529 - 45405561
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaa 250  Q
    ||||||||||||||||||||| |||||||||||    
T  45405529 aagagaaatgatatatgtacaaccattttttaa 45405561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 31663 - 31608
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  31663 taagagaaatgatatttgtacaaccattttttgacaactttctctctcatactcac 31608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 14206398 - 14206452
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  14206398 aagagaaatgatatttgtacaaccattttttgacaactttctctctcatactcac 14206452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 39458667 - 39458720
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||    
T  39458667 agagaaatgatatctgtacaaccagtttttgacaactttctctctcatactcac 39458720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 16202731 - 16202783
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||||||| | ||||| | |||||||||||||||||||||||    
T  16202731 gagaaatgatatatgtacacctattttgtgacaactttctctctcatactcac 16202783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 33910147 - 33910096
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| ||| || ||||||||| |||||||||||||||||||||||    
T  33910147 agaaatgatatttgttcaaccattttttgacaactttctctctcatactcac 33910096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 372782 - 372728
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| | |||||| ||||||| | |||||||||||||||||||||||    
T  372782 aagagaaatgatttttgtacaaccattttgtgacaactttctctctcatactcac 372728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 4434480 - 4434534
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||||||||| |||| ||| ||||||||||||||    
T  4434480 aagagaaatgatatttgtacaaccattttttgacaattttttctctcatactcac 4434534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 9226311 - 9226365
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||||||||||  | |||||||||||||||||||||||    
T  9226311 aagagaaatgatatttgaacatccatttaatgacaactttctctctcatactcac 9226365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 12203156 - 12203210
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||||||||  ||||||||||||||||| |||||    
T  12203156 aagagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcac 12203210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 13734422 - 13734368
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||| ||| | |||||||||||||||||||||||    
T  13734422 aagagaaatgatatttgtacaaccactttatgacaactttctctctcatactcac 13734368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 14923081 - 14923134
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||| |||||||||| ||||||||||||||||||||||    
T  14923081 aagagaaatgatatttgaacaaccatttttta-caactttctctctcatactcac 14923134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 1839401 - 1839352
Alignment:
Q  223 aaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  1839401 aaatgatatttgaacatccattttgtgacaactttctctctcatactcac 1839352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 6865848 - 6865795
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| ||| ||| | |||||||||||||||||||||||    
T  6865848 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 6865795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 31284448 - 31284403
Alignment:
Q  226 tgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||| |||||||||||||| | ||||||||||||||||||||||    
T  31284448 tgatatttgtacatccattttgtgacaactttctctctcatactca 31284403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 5130438 - 5130386
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||||||||| | ||| | ||||||| |||||||||||||||    
T  5130438 gagaaatgatatatgtacatctactttgtgacaacttactctctcatactcac 5130386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 4878341 - 4878294
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctct 263  Q
    ||||||||||||||||||||| ||  | ||||||||||||||||||||    
T  4878341 ataagagaaatgatatatgtatatttactttttaacaactttctctct 4878294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 32732181 - 32732126
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||| |||| ||||||  |||||||  |||||||||||||||||||||||    
T  32732181 taagagaaattatatttgtacaatcatttttgtacaactttctctctcatactcac 32732126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 1293158 - 1293120
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  1293158 agagaaatgatatttgtacaaccattttttaacaacttt 1293120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 3640258 - 3640204
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||||| |||||   |||||||||||||||||||||||    
T  3640258 aagagaaatgatatttgaacatctattttgagacaactttctctctcatactcac 3640204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 4088442 - 4088480
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  4088442 agagaaatgatatttgtacatccattttataacaacttt 4088480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 272
Target Start/End: Complemental strand, 31025043 - 31025013
Alignment:
Q  242 attttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||||    
T  31025043 attttttaacaactttctctctcatactcac 31025013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 33567285 - 33567231
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||| ||||||||| |||||| ||| ||| | |||||||||||||||||||||||    
T  33567285 aagacaaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 33567231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 253
Target Start/End: Complemental strand, 39191906 - 39191872
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaa 253  Q
    |||||||||||||||||||||||| ||||||||||    
T  39191906 agagaaatgatatatgtacatccactttttaacaa 39191872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 8725483 - 8725430
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||| |||| |||||| ||| ||| | |||||||||||||||||||||||    
T  8725483 agagaaattatatttgtacaaccactttattacaactttctctctcatactcac 8725430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 12878754 - 12878803
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcata 267  Q
    |||||||||||||| |||||| ||||||| | | ||||||||||||||||    
T  12878754 aagagaaatgatatttgtacaaccattttattataactttctctctcata 12878803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 15953106 - 15953053
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||||| || ||||| ||||| | |||||||| |||||||||||||    
T  15953106 aagagaaatgatatttgaacatctattttgtgacaactttttctctcatactca 15953053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 16594447 - 16594410
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||| || ||||||||||||||||||||||    
T  16594447 gagaaatgatatttgaacatccattttttaacaacttt 16594410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 25255252 - 25255289
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  25255252 gagaaatgatatatgtacatccactttttaccaacttt 25255289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 25319042 - 25319079
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  25319042 gagaaatgatatatgtacatccactttttaccaacttt 25319079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 41210573 - 41210528
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctca 265  Q
    |||||||||||| | |||| |||| |||||||||||||||||||||    
T  41210573 gagaaatgatatttatacaaccatattttaacaactttctctctca 41210528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 43153121 - 43153068
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| | ||||||  |||||||||||||||||| ||||    
T  43153121 agagaaatgatatttgtacaacaatttttgtacaactttctctctcatattcac 43153068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Original strand, 18449296 - 18449324
Alignment:
Q  244 tttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||    
T  18449296 tttttaacaactttctctctcatactcac 18449324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 26660486 - 26660446
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactt 256  Q
    |||||||||||||||| |||||||||||||| | |||||||    
T  26660486 ataagagaaatgatatttgtacatccattttgtgacaactt 26660446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 26932078 - 26932038
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactt 256  Q
    |||||||||||||||| |||||||||||||| | |||||||    
T  26932078 ataagagaaatgatatttgtacatccattttgtgacaactt 26932038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 34270337 - 34270389
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactc 270  Q
    |||||||||||||| || ||||||| ||| | |||| ||||||||||||||||    
T  34270337 aagagaaatgatatttgaacatccactttgtgacaattttctctctcatactc 34270389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 28657504 - 28657448
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  28657504 ataagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 28657448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 43769721 - 43769775
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  43769721 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 43769775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 1868958 - 1868901
Alignment:
Q  215 aataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||||| |||||| ||||||||  |||||||||| ||||||||||||    
T  1868958 aataagagaaatgatatttgtacaaccatttttgtacaactttctatctcatactcac 1868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 31657657 - 31657710
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  31657657 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 31657710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 42490919 - 42490972
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||    
T  42490919 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcac 42490972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 4974111 - 4974159
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatac 268  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||    
T  4974111 gagaaatgatatttgtacaactattttttaacaactttctctctcatac 4974159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 24310581 - 24310529
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||||  |||||||||||||||||||||||    
T  24310581 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcac 24310529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 35500860 - 35500808
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||||||||||||    
T  35500860 agagaaatgatatatgaacatttattttttgacaactttctctctcatactca 35500808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 44133544 - 44133596
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||    
T  44133544 gagaaatgatatatgtacatccacttttttacaattttttctctcatactcac 44133596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 5386385 - 5386436
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| || ||| ||||||||| |||||||||||||||||||||||    
T  5386385 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcac 5386436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 4511823 - 4511877
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||| | ||||||| | |||||||||||||||||||||||    
T  4511823 aagagaaatgatatttgtataaccattttatgacaactttctctctcatactcac 4511877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 46686243 - 46686296
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||||||| || ||||||||||||||||||||||    
T  46686243 aagagaaatgatatttgtacaaccattttgta-caactttctctctcatactcac 46686296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 2109442 - 2109495
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| |||| |||| |||||||||||| ||||||||||    
T  2109442 agagaaatgatatttgtacaaccatcttttgacaactttctctttcatactcac 2109495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 26718379 - 26718432
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||||||||||| | |||| ||||||||||||||||||    
T  26718379 agagaaatgatatttgaacatccattttatgacaattttctctctcatactcac 26718432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 26731007 - 26731060
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||||||||||| | |||| ||||||||||||||||||    
T  26731007 agagaaatgatatttgaacatccattttatgacaattttctctctcatactcac 26731060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 39068021 - 39067984
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  39068021 gagaaatgatatatgtacatccattttttgacaacttt 39067984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 39605978 - 39606030
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| ||| |||||||| | ||||||||||||||||||||||    
T  39605978 agagaaatgatatatgaacaaccatttttga-caactttctctctcatactcac 39606030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 46173545 - 46173602
Alignment:
Q  215 aataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||||| |||||| ||| ||| | ||||||||||||||| |||||||    
T  46173545 aataagagaaatgatatttgtacaaccactttgtgacaactttctctctcgtactcac 46173602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 50980601 - 50980654
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| ||||||  |||||| ||||||| |||||||||||||||||    
T  50980601 agagaaatgatatttgtacaatcattttctaacaaccttctctctcatactcac 50980654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 54036591 - 54036538
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||||| |||||| ||||||| | |||||||| |||||||||||||    
T  54036591 aagagaaatgatatttgtacaaccattttgtgacaactttatctctcatactca 54036538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 27384186 - 27384234
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcata 267  Q
    ||||||||||||| |||||| ||||||| | ||||||||||||||||||    
T  27384186 agagaaatgatatttgtacaaccattttattacaactttctctctcata 27384234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 30778324 - 30778272
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||| ||| | |||||||||||||||||||||||    
T  30778324 gagaaatgatatttgtacagccaatttgtgacaactttctctctcatactcac 30778272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 32365727 - 32365675
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||| | |||||||||||||||||| ||||    
T  32365727 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatattcac 32365675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 39241361 - 39241309
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||| ||| | |||||||||||||||||||||||    
T  39241361 gagaaatgatatttgtacaaccaatttgtgacaactttctctctcatactcac 39241309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 17683359 - 17683410
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||| || ||||||||||| | |||||||| |||||||||||||    
T  17683359 gagaaatgatatttgaacatccattttatgacaactttatctctcatactca 17683410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 28676211 - 28676160
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| |||||| ||||||| | |||||||||||| ||||||||||    
T  28676211 agaaatgatatttgtacaaccattttgtgacaactttctctttcatactcac 28676160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 31413848 - 31413797
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    |||||||||||||| |||||| | ||||||  ||||||||||||||||||||    
T  31413848 aagagaaatgatatttgtacaactatttttgtacaactttctctctcatact 31413797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 37514205 - 37514166
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  37514205 aagagaaatgatatttgtacatccattttgtaacaacttt 37514166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 55601763 - 55601708
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||| ||||| || ||||| ||||| | |||||||||||||||||||||||    
T  55601763 taagagaaaagatatttgaacatctattttatgacaactttctctctcatactcac 55601708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 4949516 - 4949570
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || |||| |||||  | |||||||||||||||||||||||    
T  4949516 aagagaaatgatatttgaacattcatttggtgacaactttctctctcatactcac 4949570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 7795020 - 7795074
Alignment:
Q  215 aataagagaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    |||| |||||||||||| |||||| ||||||||  |||||||||| |||||||||    
T  7795020 aatatgagaaatgatatttgtacaaccatttttgtacaactttctttctcatact 7795074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 15522353 - 15522391
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  15522353 agagaaatgatatatgtacaaccattttctaacaacttt 15522391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 37022270 - 37022324
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| |||||||   |||||||| ||||||||||||||    
T  37022270 aagagaaatgatatttgtacaaccattttgatacaactttatctctcatactcac 37022324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 272
Target Start/End: Complemental strand, 46912837 - 46912807
Alignment:
Q  242 attttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||||    
T  46912837 attttttaacaactttctctctcatactcac 46912807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 7146193 - 7146144
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcata 267  Q
    |||||||||||||| || ||| |||||||| ||||||||| |||||||||    
T  7146193 aagagaaatgatatttgaacaaccatttttaaacaactttttctctcata 7146144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 9828044 - 9827991
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| |||||||   |||||||||||||||| ||||||    
T  9828044 agagaaatgatatttgtacaaccattttagtacaactttctctctcacactcac 9827991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 32621637 - 32621690
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||| ||||||| | |||||||||||||| ||||||||    
T  32621637 agagaaatgatatttgcacaaccattttgtgacaactttctctctaatactcac 32621690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 35824177 - 35824140
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  35824177 gagaaatgatatttgtacaaccattttttaacaacttt 35824140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 47540135 - 47540168
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaa 253  Q
    ||||||||||||||||||||||| ||||||||||    
T  47540135 gagaaatgatatatgtacatccactttttaacaa 47540168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 48494973 - 48494924
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatac 268  Q
    ||||||||||||| || ||| ||| |||||||||||||| ||||||||||    
T  48494973 agagaaatgatatttgaacaaccactttttaacaactttatctctcatac 48494924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 50158995 - 50159032
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  50158995 gagaaatgatatatgtacatccactttttgacaacttt 50159032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 15515795 - 15515847
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||  ||||| | ||||| | |||||||||||||||||||||||    
T  15515795 gagaaatgatattggtacaactattttatgacaactttctctctcatactcac 15515847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 17683236 - 17683288
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| || |||| |||||| | |||||||||||||| ||||||||    
T  17683236 gagaaatgatatttgaacattcattttatgacaactttctctcttatactcac 17683288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 29407097 - 29407045
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||| |||||| ||| ||| ||||||||||    
T  29407097 gagaaatgatatttgtacaaccattttctaacaagtttttctttcatactcac 29407045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 36444431 - 36444403
Alignment:
Q  244 tttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||    
T  36444431 tttttaacaactttctctctcatactcac 36444403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 37731926 - 37731978
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| ||||||  ||||||   |||||||||||||||||||||||    
T  37731926 gagaaatgatatttgtacaatcattttggtacaactttctctctcatactcac 37731978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 39312675 - 39312623
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| || ||||| ||||  | |||||||||||||||||||||||    
T  39312675 gagaaatgatatttgaacatctatttagtgacaactttctctctcatactcac 39312623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 6822596 - 6822541
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||    
T  6822596 taagagaaatgatatttgtacaaccattttctaacaactttttctctcatactcac 6822541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 8459614 - 8459665
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  8459614 gagaaatgatatttgtacaaccactttttaacaactttctctctcatactca 8459665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 40108129 - 40108187
Alignment:
Q  214 aaataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| | |||||| ||||||||  |||||||||||||||||||||||    
T  40108129 aaataagagaaatgatgtttgtacaaccatttttatacaactttctctctcatactcac 40108187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 25887593 - 25887646
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||||||| ||| | |||||||||||||||||||||||    
T  25887593 agagaaatgatatttgtacatccactttgtgacaactttctctctcatactcac 25887646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 44196279 - 44196238
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctct 261  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  44196279 gagaaatgatatatgtacatccactttttaacaactttctct 44196238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 22330695 - 22330639
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| |||||| ||| ||| | |||||||||||||||||||||||    
T  22330695 ataagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 22330639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 7817650 - 7817701
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  7817650 agaaatgatatttgaacatccattttgtgacaactttctctctcatactcac 7817701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 11353036 - 11352981
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| || ||||| ||||| | |||||||||||||||||||||||    
T  11353036 taagagaaatgatatttgaacatcaattttgtgacaactttctctctcatactcac 11352981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 2323302 - 2323356
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| | ||||| | |||||||||||||||||||||||    
T  2323302 aagagaaatgatatttgtacaacaattttatgacaactttctctctcatactcac 2323356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 2469701 - 2469755
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||| ||| | |||||||||||||||||||||||    
T  2469701 aagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 2469755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 3937183 - 3937129
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||||| ||||| | |||||||||||||||||||||||    
T  3937183 aagagaaatgatatttgaacatctattttgtgacaactttctctctcatactcac 3937129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 28862144 - 28862094
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcata 267  Q
    ||||||||||||||| |||||||||||||| | |||||||||||| |||||    
T  28862144 taagagaaatgatatttgtacatccattttatgacaactttctctttcata 28862094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 37352052 - 37351998
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||| ||| | |||||||||||||||||||||||    
T  37352052 aagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcac 37351998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 37856231 - 37856173
Alignment:
Q  214 aaataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||| |||||| ||||||| | |||||||| |||| |||||||||    
T  37856231 aaataagagaaatgatatttgtacaaccattttgtgacaactttatctcacatactcac 37856173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 43213317 - 43213371
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||| ||| |||||| ||||||||||||||||||    
T  43213317 aagagaaatgatatttgtacaaccactttctaacaattttctctctcatactcac 43213371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 24380782 - 24380729
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| ||||||||  |||||||||| ||||||||||||    
T  24380782 agagaaatgatatttgtacaaccatttttatacaactttctttctcatactcac 24380729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 27570354 - 27570407
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||| | ||||||||| |||||||||||||||||||||    
T  27570354 agagaaatgatatttgaacaactattttttaataactttctctctcatactcac 27570407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 33224834 - 33224887
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||||| ||||| | |||||||||||||||||||||||    
T  33224834 agagaaatgatatttgaacatctattttgtgacaactttctctctcatactcac 33224887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 35293127 - 35293180
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||||||||||||| |||||||||| ||| ||||||||    
T  35293127 agagaaatgatatttgaacatccattttttgacaactttctttcttatactcac 35293180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 39875871 - 39875822
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcata 267  Q
    |||||||||||||| | |||| ||| ||||||||||||||||||||||||    
T  39875871 aagagaaatgatatttatacaaccactttttaacaactttctctctcata 39875822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 47078311 - 47078258
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||||| ||||| | |||||||||||||||||||||||    
T  47078311 agagaaatgatatttgaacatctattttatgacaactttctctctcatactcac 47078258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 24267721 - 24267681
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  24267721 taagagaaatgatatatgtacatccactttttgacaacttt 24267681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 27866597 - 27866545
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||||  |||||||| ||||||||||||||    
T  27866597 gagaaatgatatttgtacaaccatttttgtacaactttatctctcatactcac 27866545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 33465099 - 33465047
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||||  |||| ||||||||||||||||||    
T  33465099 gagaaatgatatttgtacaaccatttttgtacaattttctctctcatactcac 33465047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 3062343 - 3062394
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| || ||||||||||| | |||||||||||||| ||||||||    
T  3062343 agaaatgatatttgaacatccattttgtgacaactttctctcttatactcac 3062394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 37848686 - 37848631
Alignment:
Q  214 aaataagagaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    ||||| |||||||||||| ||||||  |||||||  ||||||||||||||||||||    
T  37848686 aaatatgagaaatgatatttgtacaatcatttttgtacaactttctctctcatact 37848631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 38547349 - 38547298
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| |||||| | ||||||| |||||||||| ||||||||||||    
T  38547349 agaaatgatatttgtacaactattttttgacaactttctttctcatactcac 38547298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 41985163 - 41985108
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| ||||||  || ||| | |||||||||||||||||||||||    
T  41985163 taagagaaatgatatttgtacaatcaatttgtgacaactttctctctcatactcac 41985108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 41989804 - 41989750
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| |  ||| |||||||||| ||||||||||||||||||||||    
T  41989804 taagagaaatgatattttaacaaccatttttta-caactttctctctcatactcac 41989750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 26041319 - 26041373
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||  ||||| ||||||| | |||||||||||| ||||||||||    
T  26041319 aagagaaatgatattcgtacaaccattttatgacaactttctctttcatactcac 26041373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 31785533 - 31785479
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| ||| ||| | | |||||||||||||||||||||    
T  31785533 aagagaaatgatatttgtacaaccactttatgaaaactttctctctcatactcac 31785479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 42584801 - 42584839
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  42584801 agagaaatgatatatgtacaaccattttctaacaacttt 42584839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 43942647 - 43942700
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| || ||| | |||||||| ||||||||||||||||||||||    
T  43942647 aagagaaatgatatttgaacaactatttttta-caactttctctctcatactcac 43942700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 272
Target Start/End: Original strand, 46651705 - 46651735
Alignment:
Q  242 attttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||||    
T  46651705 attttttaacaactttctctctcatactcac 46651735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 23848087 - 23848136
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcata 267  Q
    |||||||||||||| |||| |  ||||||||||||||||||||| |||||    
T  23848087 aagagaaatgatatttgtataatcattttttaacaactttctctatcata 23848136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 34108926 - 34108889
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  34108926 gagaaatgatatatgtacaaccattttctaacaacttt 34108889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 35823050 - 35823013
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaa 253  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  35823050 ataagagaaatgatatttgtacatccattttctaacaa 35823013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 36352658 - 36352621
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  36352658 gagaaatgatatatgtacaaccattttgtaacaacttt 36352621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 40854726 - 40854689
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  40854726 gagaaatgatatctgtacatccattttctaacaacttt 40854689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 43444635 - 43444684
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    |||||||||||| |||||| ||| ||| | ||||||||||||||||||||    
T  43444635 gagaaatgatatttgtacaaccactttatgacaactttctctctcatact 43444684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 45420121 - 45420068
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| || ||| | ||||||| |||||||||||||||||| ||||    
T  45420121 agagaaatgatatttgaacaactattttttgacaactttctctctcatattcac 45420068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 49142578 - 49142525
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| ||||||||  | || ||||||||||||||||||    
T  49142578 agagaaatgatatttgtacaaccatttttgtaaaattttctctctcatactcac 49142525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Original strand, 5724073 - 5724101
Alignment:
Q  244 tttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||    
T  5724073 tttttaacaactttctctctcatactcac 5724101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 5906029 - 5905973
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| ||||||  ||||||   | |||||||||||||||||||||    
T  5906029 ataagagaaatgatatttgtacaatcattttggtataactttctctctcatactcac 5905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 8742394 - 8742446
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| | || |||| |||||||| ||||||||||||||    
T  8742394 gagaaatgatatttgtacaactatgttttgacaactttttctctcatactcac 8742446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 22925334 - 22925290
Alignment:
Q  228 atatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||| | ||||||| |||||| ||||||||||||||||    
T  22925334 atatatgtacaactatttttttacaactatctctctcatactcac 22925290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 25272602 - 25272654
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| ||||||||  |||||||||||||  ||||||||    
T  25272602 gagaaatgatatttgtacaaccatttttgtacaactttctctcatatactcac 25272654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 39497375 - 39497339
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaac 254  Q
    |||||||||||||| |||||| |||||||||||||||    
T  39497375 aagagaaatgatatttgtacaaccattttttaacaac 39497339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 28748121 - 28748175
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    ||||||||||||||| || ||||||||||| | ||||||||||||||||||||||    
T  28748121 taagagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 28748175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 6158842 - 6158789
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||||||||||||| || ||||| |||||||| |||||||||||||    
T  6158842 aagagaaatgatatatgtacattcactttttgacaactttatctctcatactca 6158789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 9200118 - 9200171
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||| |||||||||||| |||||||| |||||||||||| ||||||||||    
T  9200118 agagaaataatatatgtacattcattttttgacaactttctctttcatactcac 9200171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 26860679 - 26860623
Alignment:
Q  215 aataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||    
T  26860679 aataagagaaatgatatatgtacatccactttttgacaa-tttttctctcatactcac 26860623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 32644623 - 32644675
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| | ||||||| |||||||||||||||||||||||    
T  32644623 gagaaatgatatttgtacaactattttttgacaactttctctctcatactcac 32644675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 31517243 - 31517188
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||| |||||| ||| ||||| |||||||| ||||||||||||||    
T  31517243 taagagaaatgatatttgtacaaccactttttgacaactttttctctcatactcac 31517188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 16328764 - 16328714
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcata 267  Q
    ||||||||||||||| |||||| ||||||| |||||||||| |||||||||    
T  16328764 taagagaaatgatatttgtacaaccattttataacaactttatctctcata 16328714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 5028330 - 5028273
Alignment:
Q  215 aataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||||||| |  ||||||||||| | |||||||||||||| ||||||||    
T  5028330 aataagagaaatgatatttaaacatccattttgtgacaactttctctcttatactcac 5028273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 12427289 - 12427236
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactca 271  Q
    |||||||||||||| |||||||||| ||||  |||||||||||| |||||||||    
T  12427289 aagagaaatgatatttgtacatccacttttcgacaactttctctttcatactca 12427236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 2165362 - 2165310
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactc 270  Q
    |||||||||||||| |||||| ||||||||  |||||||| ||||||||||||    
T  2165362 aagagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2165310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 2176995 - 2176943
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactc 270  Q
    |||||||||||||| |||||| ||||||||  |||||||| ||||||||||||    
T  2176995 aagagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2176943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 9189018 - 9188978
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  9189018 taagagaaatgatatttgtacaaccattttttaacaacttt 9188978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 28041877 - 28041821
Alignment:
Q  216 ataagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||| |  ||||||||||  |||||||||| ||||||||||||||    
T  28041877 ataagagaaatgatatttaaacatccatttggtaacaactttttctctcatactcac 28041821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 8778945 - 8778906
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  8778945 aagagaaatgatatttgtacaaccattttttaacaacttt 8778906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 269
Target Start/End: Original strand, 16121157 - 16121212
Alignment:
Q  214 aaataagagaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    ||||| |||||||||||| |||||| ||||||||  |||||||||||| |||||||    
T  16121157 aaatatgagaaatgatatttgtacaaccatttttgtacaactttctctttcatact 16121212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 17442830 - 17442885
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||| |||| |||||| ||||||||  |||||||||||||| ||||||||    
T  17442830 taagagaaataatatttgtacaaccatttttgtacaactttctctcttatactcac 17442885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 25567553 - 25567498
Alignment:
Q  217 taagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||  ||||| ||||||||  |||||||| ||||||||||||||    
T  25567553 taagagaaatgatattcgtacaaccatttttgtacaactttatctctcatactcac 25567498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 26391358 - 26391319
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaacttt 257  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  26391358 aagagaaatgatatttgtacaaccattttttaacaacttt 26391319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 1196056 - 1196110
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| ||||||  || ||||| |||||||||||||| ||||||||    
T  1196056 aagagaaatgatatttgtacaatcactttttgacaactttctctctaatactcac 1196110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 272
Target Start/End: Original strand, 7693348 - 7693378
Alignment:
Q  242 attttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||||    
T  7693348 attttttaacaactttctctctcatactcac 7693378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 12441536 - 12441590
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||||| |||||| | | ||| | |||||||||||||||||||||||    
T  12441536 aagagaaatgatatttgtacaactactttgtgacaactttctctctcatactcac 12441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 272
Target Start/End: Complemental strand, 30253351 - 30253321
Alignment:
Q  242 attttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||||    
T  30253351 attttttaacaactttctctctcatactcac 30253321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 2241879 - 2241826
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| | |||| ||| ||||| |||||||| ||||||||||||||    
T  2241879 agagaaatgatatttatacaaccactttttgacaactttttctctcatactcac 2241826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 9395397 - 9395345
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| |||||| | ||||||  |||||||||||| ||||||||||    
T  9395397 gagaaatgatatttgtacaactatttttgtacaactttctctttcatactcac 9395345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 18792468 - 18792440
Alignment:
Q  244 tttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||    
T  18792468 tttttaacaactttctctctcatactcac 18792440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 32135491 - 32135439
Alignment:
Q  220 gagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    |||||||||||| ||||||  |||||||  |||||||||||| ||||||||||    
T  32135491 gagaaatgatatttgtacaatcatttttgtacaactttctctatcatactcac 32135439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 44784 - 44835
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    |||||||||||||| || ||||||||||| | ||||||||||||||||||||    
T  44784 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatact 44835  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 3332 - 3279
Alignment:
Q  219 agagaaatgatatatgtacatccattttttaacaactttctctctcatactcac 272  Q
    ||||||||||||| |||||| ||| ||| | |||||||||||||||||||||||    
T  3332 agagaaatgatatttgtacaaccactttctcacaactttctctctcatactcac 3279  T

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Target: scaffold0286 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 17047 - 17099
Alignment:
Q  218 aagagaaatgatatatgtacatccattttttaacaactttctctctcatactc 270  Q
    |||||||||||||| |||||| ||||||||  |||||||| ||||||||||||    
T  17047 aagagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 17099  T

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Target: scaffold0511 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Original strand, 11673 - 11701
Alignment:
Q  244 tttttaacaactttctctctcatactcac 272  Q
    |||||||||||||||||||||||||||||    
T  11673 tttttaacaactttctctctcatactcac 11701  T

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Target: scaffold0504 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 11159 - 11207
Alignment:
Q  221 agaaatgatatatgtacatccattttttaacaactttctctctcatact 269  Q
    ||||||||||| |||||| |||||||| ||||||||| ||||| |||||    
T  11159 agaaatgatatttgtacaaccatttttgaacaactttatctcttatact 11207  T

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Target: scaffold0204 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 27337 - 27365
Alignment:
Q  218 aagagaaatgatatatgtacatccatttt 246  Q
    |||||||||||||||||||||||||||||    
T  27337 aagagaaatgatatatgtacatccatttt 27365  T

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