View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19032_low_18 (Length: 303)
Name: NF19032_low_18
Description: NF19032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19032_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 10 - 250
Target Start/End: Complemental strand, 56182434 - 56182192
Alignment:
| Q |
10 |
ataaagcacttcattaaacagtactaaagtaacaaaatggaaatgtctcaagaattttagag--ttcaacaagaagacaagagaagagaacaacatacct |
107 |
Q |
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| T |
56182434 |
ataaagcacttcattaaacagtactaaagtaacaaaatggaaatgtctcaagaattttagagagttcaacaagaagacaagagaagagaacaacatacct |
56182335 |
T |
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| Q |
108 |
gtaaaactatataatattggtgctactcgttgaagtatctttagaattgaaaaaaggtgcatagttttt-aaaagtatctgtacaacaaattgaagaaat |
206 |
Q |
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| T |
56182334 |
gtaaaactatataatattgatgctactcattgaagtatctttagaattga-aaaaggtgcatagtttttaaaaagtatctgtacaacaaattgaagaaat |
56182236 |
T |
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| Q |
207 |
tagataaaacaggtagcatcagtatatgaattgaagctagagac |
250 |
Q |
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| T |
56182235 |
tagataaaacaggtagcatcagtatatgaattgaagctggagac |
56182192 |
T |
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